Changes in README.md

45e62b5fd85c07bf32886201b28fd86143ee0826 - ex - update example folder Readmes

Wed, 16 Jul 2025 12:43:51 +0000

ex - update example folder Readmes List of files: /libCEED/examples/README.md

57574c6fad597abceec04b720a8bc12cf23261cb - Merge pull request #1829 from CEED/jeremy/documentation-markers

Thu, 29 May 2025 16:23:13 +0000

Merge pull request #1829 from CEED/jeremy/documentation-markersUse HTML comments as doc inclusion markers List of files: /libCEED/examples/README.md

525f58efad3fdbd516b1ca0b43ee04d6060753fc - doc - use HTML comments as inclusion markers

Thu, 29 May 2025 15:52:49 +0000

doc - use HTML comments as inclusion markers List of files: /libCEED/examples/README.md

d89549c6e0afe634fc6cadb472a2a3224f4b1b63 - doc - hide inclusion markers in md

Wed, 28 May 2025 21:20:11 +0000

doc - hide inclusion markers in md List of files: /libCEED/examples/README.md

eca1b09c0d8fadadd2907b292376e77d2d4d9943 - Merge pull request #1008 from CEED/jeremy/doc-fixes

Mon, 27 Jun 2022 15:19:21 +0000

Merge pull request #1008 from CEED/jeremy/doc-fixesSmall Doc Fixes List of files: /libCEED/examples/README.md

17be3a414c6fae47654f1361bae9c9dbcdd66795 - doc - update style since I'm touching the file

Thu, 23 Jun 2022 16:39:11 +0000

doc - update style since I'm touching the file List of files: /libCEED/examples/README.md

834f70d99eaa96f2921afabf3840cc9b58aef8d7 - Merge pull request #915 from CEED/jed/libceed.org

Tue, 15 Mar 2022 21:27:09 +0000

Merge pull request #915 from CEED/jed/libceed.orgUpdate links to https://libceed.org List of files: /libCEED/examples/README.md

13964f0727a62e5421e6d3b433e838b96a9ce891 - Update links to https://libceed.org

Tue, 15 Mar 2022 13:00:01 +0000

Update links to https://libceed.org List of files: /libCEED/examples/README.md

cd3003229e5325bdf31f9e102d9fa328f6582fc1 - Merge pull request #703 from CEED/jed/doc-myst-nb

Fri, 13 Aug 2021 23:35:28 +0000

Merge pull request #703 from CEED/jed/doc-myst-nbdoc: replace recommonmark with MyST List of files: /libCEED/examples/README.md

68e843ee0303723bf2ec95aa2ac2af8f169174e7 - doc: replace ReST tables/list-table with MyST

Tue, 03 Aug 2021 07:14:57 +0000

doc: replace ReST tables/list-table with MyST List of files: /libCEED/examples/README.md

bcb2dfae4c301ddfdddf58806f08f6e7d17f4ea5 - doc: replace recommonmark with MyST and migrate ReST to MyST

Thu, 04 Feb 2021 05:01:36 +0000

doc: replace recommonmark with MyST and migrate ReST to MySTThis offers more familiar syntax for most writing, as well as natural$\pi$ math (versus :math:`\pi`) and markdown syntax for all ReSTfeatures.The API doc stubs remain in ReST as recommended for autodoc.https://myst-parser.readthedocs.io/en/latest/sphinx/use.html#use-sphinx-ext-autodoc-in-markdown-filesThe change was largely implemented usinghttps://github.com/executablebooks/rst-to-myst/ with some manualfix-ups. Tables (both ReST built-in tables and list-table) remain undereval-rst until they can be manually updated. List of files: /libCEED/examples/README.md

b250684e6ab7a947684c360148fcfb7c3899437a - Merge branch 'master' into valeria/jupyter-notebook-tutorials

Thu, 26 Mar 2020 21:05:59 +0000

Merge branch 'master' into valeria/jupyter-notebook-tutorials List of files: /libCEED/examples/README.md

ccaff0309dc399f656ea11018b919b30feb8b0fa - Solid Mechanics Example (#474)

Thu, 26 Mar 2020 21:03:55 +0000

Solid Mechanics Example (#474)libCEED + PETSc Solid Mechanics example Co-authored-by: Jeremy L Thompson Co-authored-by: Arash Mehraban Co-authored-by: Jed Brown Co-authored-by: Valeria Barra * Solids - initial commit of elasticity example Co-authored-by: Jeremy L Thompson Co-authored-by: Arash Mehraban * Solids - add VLA macro * Solids - fix test for mesh file output string * Solids - update documentation Co-authored-by: Jeremy L Thompson Co-authored-by: Arash Mehraban * Solids - update README * Solids - update ctx struct and casting for CUDA * Tests - clean up test conditions for GPU backends * GPU - fix falbacks identified * CUDA - whitelist FDM Inverse * make style * doc: solids editing/correctness * Solids - separate FE boilerplate into its own function * Solids - clean up double includes * doc: add more complete explanation of hyperelasticity and formulation * Solids - Use ISGetSize for global number of face sets (had no effect on PETSc bug in MR 2615) * edited docs for hyperFS * Improve doc of solids example with some constitent notation and fonts * HyperSS docs modified * edited typo * linearization added * fixed a typo * Improved doc * doc: more writing on hyperelasticity and implementation tradeoffs * Solids - fix typo * Solids - compute and store C, Cinv, and S as symmetric * Solids - use new Newton linearization, but its not converging * Solids - update BC handling * Solids - update README with new BC options * removed old notation * Solids - whitespace changes only in documentation * doc: adjust differential notation and derive dP(dF) * Solids - small documentation flow edits * Solids - simplify setting BCs * Solids - Symmetritize e in SS * Solids - set more reasonable default number of steps for nonlinear * Solids - fix documentation typo * Solids - clean up computation of deltaS * Solids - fix sample runs * Solids - fix hyperSS jacobian * Solids - fix hyperSS documentation * Solids - clean up code for hyperSS * Solids - add file and function docstrings * doc: commutative diagram of linearization and stable stress expression * Solids - update hyperSS documentation with linearization * doc: further tips on stable computation * Solids - fix typo with trace in hyperSS * Solids - intro and hyperSS documentation updates * Solids - update hyperFS for numerical stability with small E and nearly incompressible * examples/solids: simpler C = I + 2E * Solids - more compact/readable E computation * Solids - minor style consistency change * Solids - replace log1p with series approximation, log1p is not vectorized in libc * Solids - refactor common components between hyperFSF and hyperFSdF * examples/solids: use PETSc dependency flags for incremental rebuild * examples/solids: extend range of log1p_series via shift/scale * Solids - add bc_clamp_max option to specify maximum displacement for clamped boundary * make style * Solids - update with sample run informantion and spellchecking * Doc - typo fixes * Solids - homogonize presentation of command line options * examples/solids: fix -Wmisleading-indentation * examples/fluids: PETSc 3.13 compatibility * examples/solids: use log1p for numerical stability in hyperSS * doc: copy editing in examples/solids * Solids - update documentation on running the code * Solids - convert README to rst and include in documentation * Solids - clean dependency file * Solids - use log1p approximation in hyperSS as well * Solids - update README to explain mms * Solids - switch range on hyperSS log1p series approximation * Solids - update README to clarify mandatory options * Solids - add link to sample meshes * Solids - simplify listing of mesh options * Travis - use newer PETSc * Solids - update sample run to list [.exo file] instead of name of sample mesh * Solids - update make clean to remove src/*.d * examples/solids: makefile cleanup * make style * doc examples/solids: clean up and explain nondimensionalization * examples/solids: document algebraic solver * examples/solids: use CG for Chebyshev eig estimation * doc: fix references to examples/fluids * Solids - remove mesh folder * Solids - drop expicit ExodusII requirement, PETSc supports many types of meshes * doc: mention PETSc --download-exodusii for Exodus * doc: fix latexpdf * Fix \longrightarrow rendering in PDF * Solids - fix toctree link to README for pdflatex * Examples and BPs Docs: Homogenize math with dS and dV and other tiny esthetics * Solids - fix unshifted series for hyperSS log1p * Improve doc of bpssphere: Add differential for consistency with all other examples and explain domain for clarity * Solids - include sample mesh image * Move mesh figure after note and slightly rename inclusion marker Co-authored-by: Arash Mehraban Co-authored-by: Jed Brown Co-authored-by: valeriabarra List of files: /libCEED/examples/README.md

4bf89169f3121561b0dd6ce54e4df1c7399c55e6 - Merge pull request #469 from CEED/jed/doc-examples

Wed, 11 Mar 2020 21:50:09 +0000

Merge pull request #469 from CEED/jed/doc-examplesJed/doc examples List of files: /libCEED/examples/README.md

6af3ff1c792844160e400e2c2c52aec9faa53c18 - Update examples/README

Tue, 10 Mar 2020 15:04:36 +0000

Update examples/README List of files: /libCEED/examples/README.md

b9c05c73848caa4a8e85dca1ee63c2e7e70143c4 - Merge branch 'jed/ns-dmplex' [PR #458]

Thu, 20 Feb 2020 00:55:02 +0000

Merge branch 'jed/ns-dmplex' [PR #458]* jed/ns-dmplex: (73 commits) NS: remove density_current_primitive (still work in progress) Remove a bunch of unused variables and update doc Update README: remove density_current_primitive problem option for now Use const in VLA declaration casts to suppress icc warning also in densitycurrent_primitive Remove a bunch of unused or double-declared variables Update README NS: use const in VLA casts to suppress icc warning NS: add command-line support for specifying DC center/axis NS: return to insulated no-slip walls instead of full-Dirichlet NS: remove dead code for scaling VTK output back to dimensional units NS: add support for free slip wall boundary conditions NS density_current: remove redundant initial/boundary condition and trailing whitespace Some changes in documentation Update top-level README Update examples/README Update examples/navier-stokes/README Update .gitignore Update documentation Initialize *problem pointer as NULL NS: move nsplex.c to navierstokes.c ... List of files: /libCEED/examples/README.md

ae3c328e56bdbd0bff3405530a0b8ce7d6651701 - Update examples/README

Wed, 12 Feb 2020 21:40:04 +0000

Update examples/README List of files: /libCEED/examples/README.md

66087c0803b66a861339d30698fcb9988ebff34d - Rename ceed examples and minor doc changes (#442)

Tue, 14 Jan 2020 18:54:48 +0000

Rename ceed examples and minor doc changes (#442)* Rename ex-1 -> ex1-volume, ex2 -> ex2-surface and add ex2-surface.okl * Update READMEs * Update doc List of files: /libCEED/examples/README.md

32d2ee49b14cb706f4f808410107441006454a20 - PETSc example: Areasphere (#439)

Mon, 13 Jan 2020 23:07:04 +0000

PETSc example: Areasphere (#439)* Initial development of area sphere * Update examples/ceed/.gitignore with ex2 * Fix file path for OKL files List of files: /libCEED/examples/README.md

cb32e2e7f026784d97a57f1901677e9727def907 - Add PETSc example areaplex (#394)

Thu, 24 Oct 2019 02:40:49 +0000

Add PETSc example areaplex (#394) Update bps files with new subfolders structure * Add header h and okl files * Update REAMDE.md List of files: /libCEED/examples/README.md