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/petsc/doc/
H A Dmakefile1 # Initially generated with sphinx-quickstart
6 SPHINXBUILD ?= sphinx-build
13 …-@echo " make sphinxhtml - build the HTML website inside a created Python virtual environment (v…
16 # @$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS)
21 @$(SPHINXBUILD) -b linkcheck "$(SOURCEDIR)" "$(LINKCHECKDIR)" $(SPHINXOPTS)
26 …cd .. ; ${RM} -rf petsc-doc-env; python3 -m venv petsc-doc-env ; source petsc-doc-env/bin/activate…
29 -@${RM} -rf _build __pycache__
32 git clone https://gitlab.com/petsc/images.git -b main-2 --depth=1 images
34 website-deploy: images
35 $(SPHINXBUILD) -b dirhtml "$(SOURCEDIR)" "$(BUILDDIR)" -T -E -j auto $(SPHINXOPTS)
[all …]
/petsc/lib/petsc/bin/maint/
H A Dbuilddist1 #!/bin/bash -ex
5 # Usage: builddist petscrepo [branch/commit] [version-suffix]
9 # when version-suffix="SETVERSION", obtain it from include/petscversion.h
12 # builddist /sandbox/petsc/petsc.clone balay/foo [creates petsc-HASH.tar.gz]
13 # builddist /sandbox/petsc/petsc.clone main ver-suffix [creates petsc-ver-suffix.tar.gz]
14 # builddist /sandbox/petsc/petsc.clone release SETVERSION [creates petsc-3.24.5.tar.gz]
18 # ignore command line options in CI mode - and build tarball from current state setup by CI
19 if [ ! -z "${CI_PIPELINE_ID+x}" ]; then
20 petscrepo=`pwd -P`
24 version=-$3
[all …]
H A Dbk2hg.py3 # Usage bk2hg local-bk-repo local-hg-repo
6 # -i : create/initialize a new hg repo
8 # bk2hg.py /sandbox/petsc/petsc-dev-bk /sandbox/petsc/petsc-dev-hg
10 # local-bk-repo is a valid bk repository
11 # local-hg-repo is a new location
19 # Get the key for the tip revision - so the bk <-> hg key mappings can be stored
23 fd=os.popen('hg tip -v')
31 if '-i' in sys.argv:
32 sys.argv.remove('-i')
38 print('Usage:', sys.argv[0], '[-i] local-bk-repo local-hg-repo')
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/petsc/systems/Apple/OSX/bin/
H A Dmakeall3 # This script makes a Apple Mac OS X installer for PETSc, it uses arch-osx-release.py, arch-osx-deb…
11 if [ ! -f include/petscversion.h ]; then
17 export PETSC_ARCH=arch-osx-debug
18 rm -rf arch-osx-debug
19 ./systems/Apple/OSX/bin/arch-osx-debug.py
23 export PETSC_ARCH=arch-osx-release
24 rm -rf arch-osx-release
25 ./systems/Apple/OSX/bin/arch-osx-release.py
36 echo "To use the PETSc.framework in examples either run the installer ${PETSC_DIR}/PETSc-OSX.dmg"
37 echo " or sudo cp -r ${PETSC_DIR}/arch-osx-release/PETSc-OSX /Library/Frameworks"
[all …]
H A Dmakedmg9 echo "Creating ${PETSC_DIR}/PETSc-OSX.dmg from frameworks in ${PETSC_DIR}/arch-osx-release and debu…
12 rm -rf pack.temp.dmg tempsource ${PETSC_DIR}/PETSc-OSX.dmg
14 cp -r ${PETSC_DIR}/arch-osx-release/PETSc-OSX tempsource
15 cp -r ${PETSC_DIR}/arch-osx-debug/PETSc-OSX tempsource
16 cp -r ${PETSC_DIR}/PETSc.docset tempsource
17 cp -r ${PETSC_DIR}/systems/Apple/OSX/examples tempsource/PETSc-OSX.examples
21 cp ${PETSC_DIR}/src/snes/tutorials/ex19.c tempsource/PETSc-OSX.examples/PETSc\ command\ line\ examp…
22 sed -i "" s?../../../../../../src/snes/tutorials/??g tempsource/PETSc-OSX.examples/PETSc\ command\ …
23 cp ${PETSC_DIR}/src/snes/tutorials/ex19.c tempsource/PETSc-OSX.examples/PETSc\ cocoa\ example/PETSc…
24 sed -i "" s?../../../../../../src/snes/tutorials/??g tempsource/PETSc-OSX.examples/PETSc\ cocoa\ ex…
[all …]
H A Dmakeframework10 …/snes/tutorials, with cc -v ex19.c -o ex19 -DPETSC_APPLE_FRAMEWORK=1 -F ${PETSC_DIR}/${PETSC_ARCH}…
11 # 2b) Run the installer or sudo mv -r ${PETSC_DIR}/${PETSC_ARCH}/PETSc-OSX to /Library/Framework…
12 # cc -v ex19.c -o ex19 -DPETSC_APPLE_FRAMEWORK=1 -F /Library/Frameworks/PETSc-OSX/release or…
13 …targets dependence on the PETSc framework located in /Library/Frameworks/PETSc-OSX/release or debug
16 rm -rf ${PETSC_DIR}/${PETSC_ARCH}/PETSc-OSX
18 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-OSX
19 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-OSX/$1
20 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-OSX/$1/PETSc.framework
21 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-OSX/$1/PETSc.framework/Versions
22 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-OSX/$1/PETSc.framework/Versions/A
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/petsc/systems/Apple/iOS/bin/
H A Dmakedmg9 echo "Creating ${PETSC_DIR}/PETSc-iOS.dmg from frameworks in ${PETSC_DIR}/arch-ios-simulator/PETSc-…
12 rm -rf pack.temp.dmg tempsource ${PETSC_DIR}/PETSc-iOS.dmg
14 cp -r ${PETSC_DIR}/arch-ios-simulator/PETSc-iOS tempsource
15 cp -r ${PETSC_DIR}/PETSc.docset tempsource
16 cp -r ${PETSC_DIR}/systems/Apple/iOS/examples tempsource/PETSc-iOS.examples
20 cp ${PETSC_DIR}/src/snes/tutorials/ex19.c tempsource/PETSc-iOS.examples/Basic/Classes
21 cp ${PETSC_DIR}/src/snes/tutorials/ex48.c tempsource/PETSc-iOS.examples/Basic/Classes
22 sed -i "" s?../../../../../../src/snes/tutorials/??g tempsource/PETSc-iOS.examples/Basic/Classes/ip…
23 cp ${PETSC_DIR}/src/snes/tutorials/ex19.c tempsource/PETSc-iOS.examples/testopengl/Classes
24 cp ${PETSC_DIR}/src/snes/tutorials/ex48.c tempsource/PETSc-iOS.examples/testopengl/Classes
[all …]
H A Dmakeall3 # This script makes a Apple iOS installer for PETSc, it uses arch-osx-simulator.py, makeframework, …
10 if [ ! -f include/petscversion.h ]; then
16 export PETSC_ARCH=arch-ios-simulator
17 rm -rf ${PETSC_ARCH}
18 ./systems/Apple/iOS/bin/arch-ios-simulator.py
29 echo "To use the PETSc.framework in examples either run the installer ${PETSC_DIR}/PETSc-iOS.dmg"
30 echo " or sudo cp -r ${PETSC_DIR}/PETSc-iOS /Library/Frameworks"
H A Dmakeframework8 # 2a) either run the installer or sudo -r mv ${PETSC_DIR}/${PETSC_ARCH}/PETSc-iOS /Library/Frame…
9 …ing the targets dependence on the PETSc framework located at /Library/Framework/PETSc-iOS/simulator
12 rm -rf ${PETSC_DIR}/${PETSC_ARCH}/PETSc-iOS
14 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-iOS
15 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-iOS/$1
16 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-iOS/$1/PETSc.framework
17 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-iOS/$1/PETSc.framework/Versions
18 mkdir ${PETSC_DIR}/${PETSC_ARCH}/PETSc-iOS/$1/PETSc.framework/Versions/A
19 cd ${PETSC_DIR}/${PETSC_ARCH}/PETSc-iOS/$1/PETSc.framework/Versions/
20 ln -s A Current
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/petsc/src/ts/tutorials/power_grid/stability_9bus/
H A Dex9bus.c2 This example is based on the 9-bus (node) example given in the book Power\n\
23 I(x,y) - Y*V = 0
34 petscsys.h - base PETSc routines petscvec.h - vectors
35 petscmat.h - matrices
36 petscis.h - index sets petscksp.h - Krylov subspace methods
37 petscviewer.h - viewers petscpc.h - preconditioners
38 petscksp.h - linear solvers
58 const PetscScalar QG[3] = {0.270702180178785, 0.066120127797275, -0.108402221791588};
62 const PetscScalar Xd[3] = {0.146, 0.8958, 1.3125}; /* d-axis reactance */
63 const PetscScalar Xdp[3] = {0.0608, 0.1198, 0.1813}; /* d-axis transient reactance */
[all …]
H A Dex9busadj.c2 This example is based on the 9-bus (node) example given in the book Power\n\
31 const PetscScalar QG[3] = {0.270702180178785, 0.066120127797275, -0.108402221791588};
35 const PetscScalar Xd[3] = {0.146, 0.8958, 1.3125}; /* d-axis reactance */
36 const PetscScalar Xdp[3] = {0.0608, 0.1198, 0.1813}; /* d-axis transient reactance */
37 const PetscScalar Xq[3] = {0.4360, 0.8645, 1.2578}; /* q-axis reactance Xq(1) set to 0.4360, valu…
38 const PetscScalar Xqp[3] = {0.0969, 0.1969, 0.25}; /* q-axis transient reactance */
39 const PetscScalar Td0p[3] = {8.96, 6.0, 5.89}; /* d-axis open circuit time constant */
40 const PetscScalar Tq0p[3] = {0.31, 0.535, 0.6}; /* q-axis open circuit time constant */
61 ld_nsegsp,ld_nsegsq - Number of individual load models for real and reactive power loads
62 ld_alphap,ld_alphap - Percentage contribution (weights) or loads
[all …]
H A Dex9busopt.c2 This example is based on the 9-bus (node) example given in the book Power\n\
9 …This code demonstrates how to solve a DAE-constrained optimization problem with TAO, TSAdjoint and…
38 const PetscScalar QG[3] = {0.270702180178785, 0.066120127797275, -0.108402221791588};
42 const PetscScalar Xd[3] = {0.146, 0.8958, 1.3125}; /* d-axis reactance */
43 const PetscScalar Xdp[3] = {0.0608, 0.1198, 0.1813}; /* d-axis transient reactance */
44 const PetscScalar Xq[3] = {0.4360, 0.8645, 1.2578}; /* q-axis reactance Xq(1) set to 0.4360, valu…
45 const PetscScalar Xqp[3] = {0.0969, 0.1969, 0.25}; /* q-axis transient reactance */
46 const PetscScalar Td0p[3] = {8.96, 6.0, 5.89}; /* d-axis open circuit time constant */
47 const PetscScalar Tq0p[3] = {0.31, 0.535, 0.6}; /* q-axis open circuit time constant */
68 ld_nsegsp,ld_nsegsq - Number of individual load models for real and reactive power loads
[all …]
H A Dex9busoptfd.c28 const PetscScalar QG[3] = {0.270702180178785, 0.066120127797275, -0.108402221791588};
32 const PetscScalar Xd[3] = {0.146, 0.8958, 1.3125}; /* d-axis reactance */
33 const PetscScalar Xdp[3] = {0.0608, 0.1198, 0.1813}; /* d-axis transient reactance */
34 const PetscScalar Xq[3] = {0.4360, 0.8645, 1.2578}; /* q-axis reactance Xq(1) set to 0.4360, valu…
35 const PetscScalar Xqp[3] = {0.0969, 0.1969, 0.25}; /* q-axis transient reactance */
36 const PetscScalar Td0p[3] = {8.96, 6.0, 5.89}; /* d-axis open circuit time constant */
37 const PetscScalar Tq0p[3] = {0.31, 0.535, 0.6}; /* q-axis open circuit time constant */
58 ld_nsegsp,ld_nsegsq - Number of individual load models for real and reactive power loads
59 ld_alphap,ld_alphap - Percentage contribution (weights) or loads
60 P_D0 - Real power load
[all …]
H A Dex9busdmnetwork.c4 /edges have multiple-components associated with them and one or more components has physics \n\
7 -nc : number of copies of the base case\n\n";
32 PetscScalar Xd; /* d-axis reactance */
33 PetscScalar Xdp; /* d-axis transient reactance */
34 PetscScalar Xq; /* q-axis reactance Xq(1) set to 0.4360, value given in text 0.0969 */
35 PetscScalar Xqp; /* q-axis transient reactance */
36 PetscScalar Td0p; /* d-axis open circuit time constant */
37 PetscScalar Tq0p; /* q-axis open circuit time constant */
69 id - index of the load
70 ld_nsegsp,ld_nsegsq - Number of individual load models for real and reactive power loads
[all …]
/petsc/lib/petsc/bin/
H A Dpetscmpiexec7 if [ "$1" = '-h' ] || [ "$1" = '--help' ]; then
8 …echo "Usage: petscmpiexec <-valgrind> <-debugger> -n <numberprocessors> programname <programoption…
14 if [ "$1" = "-valgrind" ]; then
16 if [ "$2" = "-debugger" ]; then
23 if [ "$1" != "-n" ] && [ "$1" != "-np" ]; then
24 …echo "Error in mpiexec command: must start with -n[p] <numberprocessors> or -valgrind -n[p] <numb…
32 if [ "$1" = "-hosts" ]; then
34 hosts="-hosts $1"
39 if [ "$1" = "--oversubscribe" ]; then
41 oversubscribe="--oversubscribe"
[all …]
/petsc/config/BuildSystem/config/packages/
H A DCoDiPack.py6 self.gitcommit = 'v2.1.0' # 2023-05-10
23 ['mkdir', '-p', includedir],
24 … ['cp', '-rf', os.path.join('include', 'codi'), os.path.join('include', 'codi.hpp'), includedir],
H A DKS.py8 …ownload = ['git://https://bitbucket.org/petsc/pkg-ks','https://bitbucket.org/petsc/pkg-ks/…
9 self.downloaddirnames = ['petsc-pkg-kst']
54 cflags += ' -fPIC'
70 -@if [ "${BUILDSHAREDLIB}" = "no" ]; then \\
74 ${RM} -rf ${INSTALL_LIB_DIR}/tmp-ks-shlib; \\
75 mkdir ${INSTALL_LIB_DIR}/tmp-ks-shlib; \\
79 …if test -f ${INSTALL_LIB_DIR}/$$LIBNAME.${AR_LIB_SUFFIX} -o -f ${INSTALL_LIB_DIR}/lt_$$LIBNAME.${A…
80 if test -f ${INSTALL_LIB_DIR}/$$LIBNAME.${SL_LINKER_SUFFIX}; then \\
81 …g=`find ${INSTALL_LIB_DIR} -type f -name $$LIBNAME.${AR_LIB_SUFFIX} -newer ${INSTALL_LIB_DIR}/$$LI…
83 …=`find ${INSTALL_LIB_DIR} -type f -name lt_$$LIBNAME.${AR_LIB_SUFFIX} -newer ${INSTALL_LIB_DIR}/$$…
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H A DTriangle.py7 self.gitcommit = 'v1.3-p2'
8 …load = ['git://https://bitbucket.org/petsc/pkg-triangle','https://bitbucket.org/petsc/pkg-…
9 self.downloaddirnames = ['petsc-pkg-triangle','Triangle']
21 …help.addArgument('TRIANGLE', '-download-triangle-build-exec=<bool>', nargs.ArgBool(None, False, 'B…
64 cflags += ' -fPIC'
65 cflags += ' -DNO_TIMER'
81 -@if [ "${BUILDSHAREDLIB}" = "no" ]; then \\
85 ${RM} -rf ${INSTALL_LIB_DIR}/tmp-triangle-shlib; \\
86 mkdir ${INSTALL_LIB_DIR}/tmp-triangle-shlib; \\
90 …if test -f ${INSTALL_LIB_DIR}/$$LIBNAME.${AR_LIB_SUFFIX} -o -f ${INSTALL_LIB_DIR}/lt_$$LIBNAME.${A…
[all …]
H A DpARMS.py7 …lf.download = ['git://https://bitbucket.org/petsc/pkg-parms.git','https://bitbucket.org/petsc/pkg…
8 self.downloaddirnames = ['petsc-pkg-parms','pARMS']
12 #self.license = 'https://www-users.cs.umn.edu/~saad/software/pARMS'
36 …AGS = '+self.updatePackageCFlags(self.getCompilerFlags())+' -DUSE_MPI -DREAL=double -DHAS_BLAS…
38 g.write('-DDBL_CMPLX\n')
40 g.write('-DDBL\n')
45 g.write('CFDEFS = -DFORTRAN_UNDERSCORE\n')
47 g.write('CFDEFS = -DFORTRAN_CAPS\n')
52 g.write('CFFLAGS = ${CFDEFS} -DVOID_POINTER_SIZE_'+str(self.types.sizes['void-p'])+'\n')
55 g.write('RMFLAGS = -rf\n')
[all …]
H A DZoltan.py18 …help.addArgument('ZOLTAN', '-with-zoltan-fortran-bindings', nargs.ArgBool(None, 0, 'Use/build Zolt…
32 args.append('--with-id-type=ullong')
33 args.append('--enable-mpi')
36 if self.argDB['with-zoltan-fortran-bindings']:
38 args.append('--enable-f90interface')
41 …raise RuntimeError('Cannot build Zoltan Fortran bindings --with-fc=0 or with a malfunctioning Fort…
44 args.append('--with-parmetis')
46 args.append('--with-scotch')
51 packageDir = os.path.join(self.packageDir,'petsc-build')
53 if self.download and self.argDB['download-'+self.downloadname.lower()+'-configure-arguments']:
[all …]
H A DHPDDM.py7 … = '87ea17ced9fb56b90ab45298489116883743fd15' # main feb-19-2026 'v'+self.version # main sep-27-20…
38 … with the MKL as \'mkl_spblas.h\' was not found, check for missing --with-blaslapack-include=/opt/…
39 buildDir = os.path.join(self.packageDir,'petsc-build')
44 if self.framework.argDB['prefix'] and not 'package-prefix-hash' in self.argDB:
57 …output,err,ret = config.package.Package.executeShellCommand(['cp','-rf',os.path.join(self.packageD…
64 if self.argDB['with-single-library']:
67 …b+[os.path.join(libDir,'libpetscml'),'-lpetsctao -lpetscts -lpetscsnes -lpetscksp -lpetscdm -lpets…
69 self.compilers.CXXPPFLAGS += ' -I'+incDir
72 # check for Windows-specific define
74 cxxflags += ' -Dpetsc_EXPORTS'
[all …]
H A Dfblaslapack.py6 self.gitcommit = 'v3.4.2-p3'
7 … = ['git://https://bitbucket.org/petsc/pkg-fblaslapack','https://bitbucket.org/petsc/pk…
8 self.downloaddirnames = ['petsc-pkg-fblaslapack']
19 if self.argDB['with-64-bit-blas-indices']:
20 raise RuntimeError('fblaslapack does not support -with-64-bit-blas-indices')
21 if hasattr(self.argDB,'known-64-bit-blas-indices') and self.argDB['known-64-bit-blas-indices']:
22 raise RuntimeError('fblaslapack does not support -known-64-bit-blas-indices')
79 if line.find("-no-prec-div") >= 1:
80 …e Intel compiler generate incorrect code on fblaslapack with the option -no-prec-div\nRun configur…
90 …hellCommand('cd '+blasDir+' && rm -rf */*.c && make -f tmpmakefile cleanblaslapck cleanlib && '+se…
[all …]
/petsc/include/petsc/private/
H A Dmatisimpl.h20 PetscBool storel2l; /* carry over local-to-local inherited in MatPtAP */
38 IS *rf, *cf; member
/petsc/
H A Dmakefile5 # * make help - useful messages on functionality
6 # * make all - compile the PETSc libraries and utilities, run after ./configure
7 # * make check - runs a quick test that the libraries are built correctly and PETSc applications …
9 # * make install - for use with ./configure is run with the --prefix=directory option
10 # * make test - runs a comprehensive test suite (requires gnumake)
11 # * make docs - build the entire PETSc website of documentation (locally)
15 # gmakefile - manages the compiling PETSc in parallel
16 # gmakefile.test - manages running the comprehensive test suite
32 OMAKE_SELF = $(OMAKE) -f makefile
33 OMAKE_SELF_PRINTDIR = $(OMAKE_PRINTDIR) -f makefile
[all …]
/petsc/src/benchmarks/
H A Dssget3 # Copyright 2017-2018
35 set -e
41 mkdir -p "${ARCHIVE_LOCATION}"
62 curl -Lo "${ARCHIVE_LOCATION}/ssstats.csv" "${SS_URL}/files/ssstats.csv"
67 if [ ! -f "${ARCHIVE_LOCATION}/ssstats.csv" ]; then
77 PROPS=$(head -$((${MATRIX_ID} + 2)) "${ARCHIVE_LOCATION}/ssstats.csv" \
78 | tail -1)
85 IFS="," read -ra PROPS <<< "$(get_properties)"
98 IFS="," read -ra PROPS <<< "$(get_properties)"
131 cat <<- EOT
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