1ae2b091fSJames Wright // SPDX-FileCopyrightText: Copyright (c) 2017-2024, HONEE contributors. 2ae2b091fSJames Wright // SPDX-License-Identifier: Apache-2.0 OR BSD-2-Clause 3149fb536SJames Wright 415747f0fSJames Wright // HONEE - High-Order Navier-stokes Equation Evaluator 5149fb536SJames Wright // Sample runs: 6149fb536SJames Wright // 7149fb536SJames Wright // ./navierstokes -ceed /cpu/self -options_file gaussianwave.yml 8149fb536SJames Wright // ./navierstokes -ceed /gpu/cuda -problem advection -degree 1 9149fb536SJames Wright // 10149fb536SJames Wright 1115747f0fSJames Wright const char help[] = "HONEE - High-Order Navier-stokes Equation Evaluator\n"; 12149fb536SJames Wright 13149fb536SJames Wright #include <navierstokes.h> 14149fb536SJames Wright #include <petscdevice.h> 15149fb536SJames Wright 16149fb536SJames Wright #include <ceed.h> 17149fb536SJames Wright #include <petscdmplex.h> 18149fb536SJames Wright #include <petscts.h> 19149fb536SJames Wright 20149fb536SJames Wright int main(int argc, char **argv) { 2115747f0fSJames Wright Honee honee; 2215747f0fSJames Wright MPI_Comm comm; 2315747f0fSJames Wright 24149fb536SJames Wright PetscCall(PetscInitialize(&argc, &argv, NULL, help)); 256a9fb8efSJames Wright comm = PETSC_COMM_WORLD; 26149fb536SJames Wright 276a9fb8efSJames Wright PetscCall(HoneeInit(comm, &honee)); 286a9fb8efSJames Wright AppCtx app_ctx = honee->app_ctx; 296a9fb8efSJames Wright ProblemData problem = honee->problem_data; 306a9fb8efSJames Wright Physics phys_ctx = honee->phys; 31149fb536SJames Wright 32149fb536SJames Wright // --------------------------------------------------------------------------- 33149fb536SJames Wright // Process command line options 34149fb536SJames Wright // --------------------------------------------------------------------------- 35149fb536SJames Wright // -- Process general command line options 36d3c60affSJames Wright PetscCall(ProcessCommandLineOptions(honee)); 37d3c60affSJames Wright PetscCall(BoundaryConditionSetUp(honee, problem, app_ctx)); 38149fb536SJames Wright 39149fb536SJames Wright // --------------------------------------------------------------------------- 40149fb536SJames Wright // Initialize libCEED 41149fb536SJames Wright // --------------------------------------------------------------------------- 42149fb536SJames Wright // -- Initialize backend 43149fb536SJames Wright Ceed ceed; 4460a7e45eSJames Wright { // Initialize Ceed 45149fb536SJames Wright PetscCheck(CeedInit(app_ctx->ceed_resource, &ceed) == CEED_ERROR_SUCCESS, comm, PETSC_ERR_LIB, "Ceed initialization failed"); 460c373b74SJames Wright honee->ceed = ceed; 47149fb536SJames Wright PetscCheck(CeedSetErrorHandler(ceed, CeedErrorStore) == CEED_ERROR_SUCCESS, comm, PETSC_ERR_LIB, "Setting libCEED error handler failed"); 48149fb536SJames Wright 4960a7e45eSJames Wright { // For SYCL backend, get stream handle from PETSc 50149fb536SJames Wright const char *resource; 51149fb536SJames Wright PetscCallCeed(ceed, CeedGetResource(ceed, &resource)); 52149fb536SJames Wright if (strstr(resource, "/gpu/sycl")) { 53149fb536SJames Wright PetscDeviceContext dctx; 54149fb536SJames Wright PetscCall(PetscDeviceContextGetCurrentContext(&dctx)); 55149fb536SJames Wright void *stream_handle; 56149fb536SJames Wright PetscCall(PetscDeviceContextGetStreamHandle(dctx, &stream_handle)); 57149fb536SJames Wright PetscCallCeed(ceed, CeedSetStream(ceed, stream_handle)); 58149fb536SJames Wright } 59149fb536SJames Wright } 6060a7e45eSJames Wright } 61149fb536SJames Wright 62149fb536SJames Wright DM dm; 63282bb53eSJames Wright { // Create DM 64149fb536SJames Wright VecType vec_type = NULL; 65149fb536SJames Wright MatType mat_type = NULL; 6660a7e45eSJames Wright CeedMemType mem_type_backend; 6760a7e45eSJames Wright 68282bb53eSJames Wright PetscCallCeed(ceed, CeedGetPreferredMemType(ceed, &mem_type_backend)); 69149fb536SJames Wright switch (mem_type_backend) { 70149fb536SJames Wright case CEED_MEM_HOST: 71149fb536SJames Wright vec_type = VECSTANDARD; 72149fb536SJames Wright break; 73149fb536SJames Wright case CEED_MEM_DEVICE: { 74282bb53eSJames Wright const char *resource; 75282bb53eSJames Wright PetscCallCeed(ceed, CeedGetResource(ceed, &resource)); 76282bb53eSJames Wright if (strstr(resource, "/gpu/cuda")) vec_type = VECCUDA; 77282bb53eSJames Wright else if (strstr(resource, "/gpu/hip")) vec_type = VECKOKKOS; 78282bb53eSJames Wright else if (strstr(resource, "/gpu/sycl")) vec_type = VECKOKKOS; 79149fb536SJames Wright else vec_type = VECSTANDARD; 80149fb536SJames Wright } 81149fb536SJames Wright } 82149fb536SJames Wright if (strstr(vec_type, VECCUDA)) mat_type = MATAIJCUSPARSE; 83149fb536SJames Wright else if (strstr(vec_type, VECKOKKOS)) mat_type = MATAIJKOKKOS; 84149fb536SJames Wright else mat_type = MATAIJ; 85282bb53eSJames Wright 864d9179f2SJames Wright PetscCall(CreateDM(honee, problem, mat_type, vec_type, &dm)); 870c373b74SJames Wright honee->dm = dm; 880c373b74SJames Wright PetscCall(DMSetApplicationContext(dm, honee)); 89*7e3656bdSJames Wright PetscCall(HoneeMeshTransformFromOptions(dm)); 90282bb53eSJames Wright } 91149fb536SJames Wright 9215747f0fSJames Wright { // Run problem setup function 93d3c60affSJames Wright PetscErrorCode (*p)(ProblemData, DM, void *); 94149fb536SJames Wright PetscCall(PetscFunctionListFind(app_ctx->problems, app_ctx->problem_name, &p)); 95149fb536SJames Wright PetscCheck(p, PETSC_COMM_SELF, 1, "Problem '%s' not found", app_ctx->problem_name); 96d3c60affSJames Wright PetscCall((*p)(problem, dm, &honee)); 97149fb536SJames Wright } 98149fb536SJames Wright 99149fb536SJames Wright // -- Set up DM 100d3c60affSJames Wright PetscCall(SetUpDM(dm, problem, app_ctx->degree, app_ctx->q_extra, phys_ctx)); 101149fb536SJames Wright 102149fb536SJames Wright // -- Refine DM for high-order viz 103d3c60affSJames Wright if (app_ctx->viz_refine) PetscCall(VizRefineDM(dm, honee, problem, phys_ctx)); 104149fb536SJames Wright 105149fb536SJames Wright // --------------------------------------------------------------------------- 106149fb536SJames Wright // Create solution vectors 107149fb536SJames Wright // --------------------------------------------------------------------------- 108149fb536SJames Wright // -- Set up global state vector Q 109149fb536SJames Wright Vec Q; 110149fb536SJames Wright PetscCall(DMCreateGlobalVector(dm, &Q)); 111149fb536SJames Wright PetscCall(VecZeroEntries(Q)); 1120c373b74SJames Wright PetscCall(DMCreateLocalVector(dm, &honee->Q_loc)); 1130c373b74SJames Wright PetscCall(DMCreateLocalVector(dm, &honee->Q_dot_loc)); 1140c373b74SJames Wright PetscCall(VecZeroEntries(honee->Q_dot_loc)); 115149fb536SJames Wright 116149fb536SJames Wright // --------------------------------------------------------------------------- 117149fb536SJames Wright // Set up libCEED 118149fb536SJames Wright // --------------------------------------------------------------------------- 119149fb536SJames Wright // -- Set up libCEED objects 120d3c60affSJames Wright PetscCall(SetupLibceed(ceed, dm, honee, app_ctx, problem)); 121149fb536SJames Wright 12296f347c2SJames Wright for (PetscInt i = 0; i < problem->num_bc_defs; i++) { 12396f347c2SJames Wright PetscCall(BCDefinitionViewFromOptions(problem->bc_defs[i], NULL, "-bc_definitions_view")); 12496f347c2SJames Wright } 12596f347c2SJames Wright 126149fb536SJames Wright // --------------------------------------------------------------------------- 127149fb536SJames Wright // Set up ICs 128149fb536SJames Wright // --------------------------------------------------------------------------- 129149fb536SJames Wright // -- Fix multiplicity for ICs 130e3663b90SJames Wright PetscCall(ICs_FixMultiplicity(dm, honee, honee->Q_loc, Q, 0.0)); 131149fb536SJames Wright 132149fb536SJames Wright // --------------------------------------------------------------------------- 133149fb536SJames Wright // Record boundary values from initial condition 134149fb536SJames Wright // --------------------------------------------------------------------------- 135149fb536SJames Wright // -- This overrides DMPlexInsertBoundaryValues(). 136149fb536SJames Wright // We use this for the main simulation DM because the reference DMPlexInsertBoundaryValues() is very slow on the GPU due to extra device-to-host 137149fb536SJames Wright // communication. If we disable this, we should still get the same results due to the problem->bc function, but with potentially much slower 138149fb536SJames Wright // execution. 139149fb536SJames Wright if (problem->set_bc_from_ics) { 1400c373b74SJames Wright PetscCall(SetBCsFromICs(dm, Q, honee->Q_loc)); 141149fb536SJames Wright } 142149fb536SJames Wright 143149fb536SJames Wright // --------------------------------------------------------------------------- 144149fb536SJames Wright // Gather initial Q values in case of continuation of simulation 145149fb536SJames Wright // --------------------------------------------------------------------------- 146149fb536SJames Wright // -- Set up initial values from binary file 147481d14cbSJames Wright if (app_ctx->use_continue_file) { 148d114cdedSJames Wright PetscCall(HoneeLoadInitialCondition(app_ctx->cont_file, &app_ctx->cont_steps, &app_ctx->cont_time, Q)); 149149fb536SJames Wright } 150149fb536SJames Wright 151149fb536SJames Wright // -- Zero Q_loc 1520c373b74SJames Wright PetscCall(VecZeroEntries(honee->Q_loc)); 153149fb536SJames Wright 154149fb536SJames Wright // --------------------------------------------------------------------------- 155149fb536SJames Wright // TS: Create, setup, and solve 156149fb536SJames Wright // --------------------------------------------------------------------------- 157149fb536SJames Wright TS ts; 158149fb536SJames Wright PetscScalar final_time; 1592a9a4b51SJames Wright PetscCall(TSSolve_NS(dm, honee, app_ctx, phys_ctx, problem, Q, &final_time, &ts)); 160149fb536SJames Wright 161149fb536SJames Wright // --------------------------------------------------------------------------- 162149fb536SJames Wright // Post-processing 163149fb536SJames Wright // --------------------------------------------------------------------------- 164e3663b90SJames Wright PetscCall(PostProcess(ts, dm, problem, honee, Q, final_time)); 165149fb536SJames Wright 1666a9fb8efSJames Wright // Cleanup 1676a9fb8efSJames Wright PetscCall(VecDestroy(&Q)); 1686a9fb8efSJames Wright PetscCall(DMDestroy(&dm)); 1696a9fb8efSJames Wright PetscCall(TSDestroy(&ts)); 170149fb536SJames Wright 171149fb536SJames Wright if (app_ctx->test_type != TESTTYPE_NONE) { 172149fb536SJames Wright PetscInt num_options_left = 0; 173dafcea5dSJames Wright PetscBool options_left = PETSC_TRUE; 174dafcea5dSJames Wright 175149fb536SJames Wright PetscCall(PetscOptionsLeftGet(NULL, &num_options_left, NULL, NULL)); 176dafcea5dSJames Wright PetscCall(PetscOptionsGetBool(NULL, NULL, "-options_left", &options_left, NULL)); 177dafcea5dSJames Wright if (options_left) 178149fb536SJames Wright PetscCheck(num_options_left == 0, PETSC_COMM_WORLD, -1, 179149fb536SJames Wright "There are unused options. This is not allowed. See error message for the unused options (or use -options_left directly)"); 180149fb536SJames Wright } 181149fb536SJames Wright 1826a9fb8efSJames Wright PetscCall(HoneeDestroy(&honee)); 183149fb536SJames Wright return PetscFinalize(); 184149fb536SJames Wright } 18515747f0fSJames Wright 18615747f0fSJames Wright // ---------- Test Cases ---------- 18715747f0fSJames Wright 188b3b24828SJames Wright //TESTARGS(name="Channel explicit div(F_diff) verify") -ceed {ceed_resource} -test_type solver -options_file tests/channel_divdiff_verify.yaml -div_diff_flux_projection_method direct -dm_plex_box_faces 4,3,1 -ts_max_steps 5 -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/channel_div_diff_verify_indirect_explicit.bin 189ea615d4cSJames Wright //TESTARGS(name="Gaussian Wave, CGNS load",only="cpu") -ceed {ceed_resource} -options_file tests/gaussianwave_cgns_load.yaml -test_type solver -ts_max_steps 7 -dm_plex_filename tests/gaussianwave_test_5.cgns -continue_filename tests/gaussianwave_test_5.cgns -dm_plex_cgns_parallel -dm_plex_box_label -dm_plex_box_label_bd none,none,periodic -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/gaussianwave-cgns-load.bin 190c4bd9656SJames Wright //TESTARGS(name="Taylor-Green Vortex Total KE") -ceed {ceed_resource} -test_type solver -options_file examples/taylor_green_vortex.yaml -dm_plex_box_faces 2,2,2 -ts_max_steps 3 -ts_monitor_total_kinetic_energy_interval 2 -ts_monitor_total_kinetic_energy ascii:taylorgreen_totalke.csv:ascii_csv -honee_max_wall_time_duration 00:05 -honee_check_step_interval 1 -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/taylor-green.bin 191ea615d4cSJames Wright //TESTARGS(name="Flat Plate STG",only="cpu") -ceed {ceed_resource} -options_file examples/flatplate_STG.yaml -dm_plex_box_faces 3,63,3 -dm_plex_box_upper -3.082,2.4,.00726 -ts_max_steps 1 -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/flatplate-STG.bin 192ea615d4cSJames Wright //TESTARGS(name="Advection 2D, boundary layer IC",only="cpu") -ceed {ceed_resource} -test_type solver -options_file examples/advection_bl.yaml -dm_plex_box_faces 3,3 -ts_max_steps 0 -advection_ic_bl_height_factor 0.5 -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/adv2d-boundary-layer-ic.bin 193ea615d4cSJames Wright //TESTARGS(name="Advection 2D, implicit square wave, direct div(F_diff)") -ceed {ceed_resource} -test_type solver -options_file examples/advection_wave.yaml -snes_mf -snes_fd -ts_type alpha -dm_plex_box_faces 5,5 -ts_max_steps 5 -diffusion_coeff 5e-3 -div_diff_flux_projection_method direct -ts_monitor_cfl ascii:adv2d-wave-square-direct_divdiff_cfl.csv:ascii_csv -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/adv2d-wave-square-direct_divdiff.bin 194ea615d4cSJames Wright //TESTARGS(name="Advection 2D, explicit square wave, indirect div(F_diff)") -ceed {ceed_resource} -test_type solver -options_file examples/advection_wave.yaml -ts_max_steps 5 -dm_plex_box_faces 5,5 -diffusion_coeff 1e-2 -Ctau_d 2 -div_diff_flux_projection_method indirect -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/adv2d-wave-square-indirect_divdiff.bin 195ea615d4cSJames Wright //TESTARGS(name="Advection 2D, sine wave IC",only="cpu") -ceed {ceed_resource} -test_type solver -options_file examples/advection_wave.yaml -ts_max_steps 0 -dm_plex_box_faces 3,3 -advection_ic_wave_type sine -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/adv2d-wave-sine.bin 196ea615d4cSJames Wright //TESTARGS(name="Newtonian and Riemann Solver Unit Tests",only="cpu") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 1e100 -compare_final_state_filename tests/output/gaussianwave-IDL-entropy.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 0 -newtonian_unit_tests -riemann_solver_unit_tests 197ea615d4cSJames Wright //TESTARGS(name="Gaussian Wave, IDL and Entropy variables") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/gaussianwave-IDL-entropy.bin -state_var entropy -dm_plex_box_faces 5,5,1 -ts_max_steps 5 -idl_decay_time 2e-3 -idl_length 0.25 -idl_start 0 -idl_pressure 70 198ea615d4cSJames Wright //TESTARGS(name="Blasius, SGS DataDriven Sequential Torch",only="torch") -ceed {ceed_resource} -options_file tests/blasius_stgtest.yaml -sgs_model_type data_driven -sgs_model_dd_leakyrelu_alpha 0.3 -sgs_model_dd_parameter_dir examples/dd_sgs_data -ts_dt 2e-9 -state_var primitive -ksp_rtol 1e-12 -snes_rtol 1e-12 -stg_mean_only -stg_fluctuating_IC -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/blasius-sgs-data-driven.bin -sgs_model_dd_implementation sequential_torch -sgs_model_dd_torch_model_path ./tests/createPyTorchModel/NNModel_HIT_fp64_jit.pt 199ea615d4cSJames Wright //TESTARGS(name="Blasius, SGS DataDriven Sequential Ceed") -ceed {ceed_resource} -options_file tests/blasius_stgtest.yaml -sgs_model_type data_driven -sgs_model_dd_leakyrelu_alpha 0.3 -sgs_model_dd_parameter_dir examples/dd_sgs_data -ts_dt 2e-9 -state_var primitive -ksp_rtol 1e-12 -snes_rtol 1e-12 -stg_mean_only -stg_fluctuating_IC -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/blasius-sgs-data-driven.bin -sgs_model_dd_implementation sequential_ceed 200ea615d4cSJames Wright //TESTARGS(name="Gaussian Wave, explicit, supg, IDL") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 1e-8 -compare_final_state_filename tests/output/gaussianwave-explicit.bin -dm_plex_box_faces 2,2,1 -ts_max_steps 5 -degree 3 -implicit false -ts_type rk -stab supg -state_var conservative -mass_ksp_type gmres -mass_pc_jacobi_type diagonal -idl_decay_time 2e-3 -idl_length 0.25 -idl_start 0 -idl_pressure 70 201c9f37605SMohammed Amin //TESTARGS(name="Advection 2D, rotation, explicit, supg, consistent mass") -ceed {ceed_resource} -test_type solver -problem advection -degree 3 -dm_plex_box_faces 2,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -units_meter 1e-2 -units_second 1e-2 -advection_ic_bubble_rc 100. -ts_dt 1e-3 -ts_max_steps 10 -stab supg -Ctaus 0.5 -mass_ksp_type gmres -mass_pc_type vpbjacobi -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/adv2d-rotation-explicit-stab-supg-consistent-mass.bin 202c9f37605SMohammed Amin //TESTARGS(name="Advection, skew") -ceed {ceed_resource} -test_type solver -options_file examples/advection.yaml -ts_max_steps 5 -wind_type translation -units_kilogram 1e-9 -units_meter 1e-2 -units_second 1e-2 -wind_translation -0.5547002,0.83205029,0 -advection_ic_type skew -dm_plex_box_faces 2,1,1 -degree 2 -stab supg -stab_tau advdiff_shakib -Ctau_a 4 -Ctau_d 0 -ksp_type gmres -diffusion_coeff 5e-4 -compare_final_state_atol 7e-10 -compare_final_state_filename tests/output/adv-skew.bin 203*7e3656bdSJames Wright //TESTARGS(name="Blasius, bc_slip, Indirect Diffusive Flux Projection") -ceed {ceed_resource} -test_type solver -options_file examples/blasius.yaml -ts_max_steps 5 -dm_plex_box_faces 3,20,1 -meshtransform_platemesh_nDelta 10 -meshtransform_platemesh_growth 1.2 -bc_outflow 5 -bc_slip 4 -compare_final_state_atol 2E-11 -compare_final_state_filename tests/output/blasius-bc_slip_indirect.bin -div_diff_flux_projection_method indirect 204*7e3656bdSJames Wright //TESTARGS(name="Blasius, bc_slip, Direct Diffusive Flux Projection") -ceed {ceed_resource} -test_type solver -options_file examples/blasius.yaml -ts_max_steps 5 -dm_plex_box_faces 3,20,1 -meshtransform_platemesh_nDelta 10 -meshtransform_platemesh_growth 1.2 -bc_outflow 5 -bc_slip 4 -compare_final_state_atol 2E-11 -compare_final_state_filename tests/output/blasius-bc_slip.bin -div_diff_flux_projection_method direct 205c9f37605SMohammed Amin //TESTARGS(name="Advection, rotation, cosine, direct div(F_diff)") -ceed {ceed_resource} -test_type solver -options_file examples/advection.yaml -ts_max_steps 5 -advection_ic_type cosine_hill -dm_plex_box_faces 2,2,1 -diffusion_coeff 5e-3 -units_kilogram 1e-9 -units_meter 1e-2 -units_second 1e-2 -div_diff_flux_projection_method direct -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/adv-rotation-cosine.bin 206755bbe25SJames Wright //TESTARGS(name="Advection, rotation, cylinder, explicit, CFL/Pe Statistics") -ceed {ceed_resource} -test_type spanstats -options_file examples/advection.yaml -ts_max_steps 5 -advection_ic_type cylinder -dm_plex_box_faces 2,2,1 -diffusion_coeff 5e-3 -implicit 0 -stab supg -advection_ic_bubble_continuity back_sharp -ts_monitor_spanstats_cflpe -units_kilogram 1e-9 -units_meter 1e-2 -units_second 1e-2 -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/cflpe-spanstats-stats-adv-rotation.bin 207ea615d4cSJames Wright //TESTARGS(name="Gaussian Wave, using MatShell") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 1e-8 -compare_final_state_filename tests/output/gaussianwave-shell.bin -dm_plex_box_faces 2,2,1 -ts_max_steps 5 -degree 3 -amat_type shell -pc_type vpbjacobi -ts_alpha_radius 0.5 20856fab57dSJames Wright //TESTARGS(name="Taylor-Green Vortex IC") -ceed {ceed_resource} -problem taylor_green -test_type solver -dm_plex_dim 3 -dm_plex_box_faces 6,6,6 -ts_max_steps 0 -taylorgreen_background_velocity 1,1,1 -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/taylor-green-IC.bin 209ea615d4cSJames Wright //TESTARGS(name="Blasius, SGS DataDriven Fused") -ceed {ceed_resource} -options_file tests/blasius_stgtest.yaml -sgs_model_type data_driven -sgs_model_dd_leakyrelu_alpha 0.3 -sgs_model_dd_parameter_dir examples/dd_sgs_data -ts_dt 2e-9 -state_var primitive -ksp_rtol 1e-12 -snes_rtol 1e-12 -stg_mean_only -stg_fluctuating_IC -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/blasius-sgs-data-driven.bin 210ea615d4cSJames Wright //TESTARGS(name="Blasius, Anisotropic Differential Filter") -ceed {ceed_resource} -test_type diff_filter -options_file tests/blasius_test.yaml -compare_final_state_atol 5e-10 -compare_final_state_filename tests/output/blasius_diff_filter_aniso_vandriest.bin -diff_filter_monitor -ts_max_steps 0 -state_var primitive -diff_filter_friction_length 1e-5 -diff_filter_wall_damping_function van_driest -diff_filter_ksp_rtol 1e-8 -diff_filter_grid_based_width -diff_filter_width_scaling 1,0.7,1 211ea615d4cSJames Wright //TESTARGS(name="Blasius, Isotropic Differential Filter") -ceed {ceed_resource} -test_type diff_filter -options_file tests/blasius_test.yaml -compare_final_state_atol 2e-12 -compare_final_state_filename tests/output/blasius_diff_filter_iso.bin -diff_filter_monitor -ts_max_steps 0 -diff_filter_width_scaling 4.2e-5,4.2e-5,4.2e-5 -diff_filter_ksp_atol 1e-14 -diff_filter_ksp_rtol 1e-16 212ea615d4cSJames Wright //TESTARGS(name="Gaussian Wave, with IDL") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/gaussianwave-IDL.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 -idl_decay_time 2e-3 -idl_length 0.25 -idl_start 0 -ts_alpha_radius 0.5 -idl_pressure 70 2130aab7249SJames Wright //TESTARGS(name="Spanwise Turbulence Statistics") -ceed {ceed_resource} -test_type turb_spanstats -options_file tests/stats_test.yaml -ts_monitor_spanstats_turbulence -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/turb-spanstats-stats.bin 2140aab7249SJames Wright //TESTARGS(name="Spanwise CFL/Pe Statistics") -ceed {ceed_resource} -test_type spanstats -options_file tests/stats_test.yaml -ts_monitor_spanstats_cflpe -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/cflpe-spanstats-stats.bin 215ea615d4cSJames Wright //TESTARGS(name="Blasius") -ceed {ceed_resource} -test_type solver -options_file tests/blasius_test.yaml -compare_final_state_atol 2E-11 -compare_final_state_filename tests/output/blasius.bin 216ea615d4cSJames Wright //TESTARGS(name="Blasius, STG Inflow") -ceed {ceed_resource} -test_type solver -options_file tests/blasius_stgtest.yaml -compare_final_state_atol 2E-11 -compare_final_state_filename tests/output/blasius_STG.bin 217ea615d4cSJames Wright //TESTARGS(name="Blasius, STG Inflow, Weak Temperature") -ceed {ceed_resource} -test_type solver -options_file tests/blasius_stgtest.yaml -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/blasius_STG_weakT.bin -weakT 218ea615d4cSJames Wright //TESTARGS(name="Blasius, Strong STG Inflow") -ceed {ceed_resource} -test_type solver -options_file tests/blasius_stgtest.yaml -compare_final_state_atol 1E-10 -compare_final_state_filename tests/output/blasius_STG_strongBC.bin -stg_strong true 219ea615d4cSJames Wright //TESTARGS(name="Channel") -ceed {ceed_resource} -test_type solver -options_file examples/channel.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/channel.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 220ea615d4cSJames Wright //TESTARGS(name="Channel, Primitive") -ceed {ceed_resource} -test_type solver -options_file examples/channel.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/channel-prim.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 -state_var primitive 221ea615d4cSJames Wright //TESTARGS(name="Density Current, explicit") -ceed {ceed_resource} -test_type solver -degree 3 -q_extra 2 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_symmetry_x 5,6 -bc_symmetry_y 3,4 -bc_symmetry_z 1,2 -units_kilogram 1e-9 -center 62.5,62.5,187.5 -rc 100. -thetaC -35. -mu 75 -gravity 0,0,-9.81 -ts_dt 1e-3 -units_meter 1e-2 -units_second 1e-2 -ts_max_steps 10 -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/dc-explicit.bin 222ea615d4cSJames Wright //TESTARGS(name="Density Current, implicit, no stabilization") -ceed {ceed_resource} -test_type solver -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_symmetry_x 5,6 -bc_symmetry_y 3,4 -bc_symmetry_z 1,2 -units_kilogram 1e-9 -center 62.5,62.5,187.5 -rc 100. -thetaC -35. -mu 75 -gravity 0,0,-9.81 -units_meter 1e-2 -units_second 1e-2 -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename tests/output/dc-implicit-stab-none.bin 223c9f37605SMohammed Amin //TESTARGS(name="Advection, rotation, implicit, SUPG stabilization") -ceed {ceed_resource} -test_type solver -problem advection -CtauS .3 -stab supg -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_wall 1,2,3,4,5,6 -wall_comps 4 -units_kilogram 1e-9 -units_meter 1e-2 -units_second 1e-2 -advection_ic_bubble_rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -compare_final_state_atol 5E-4 -ts_max_steps 10 -compare_final_state_filename tests/output/adv-rotation-implicit-stab-supg.bin 224c9f37605SMohammed Amin //TESTARGS(name="Advection, translation, implicit, SU stabilization") -ceed {ceed_resource} -test_type solver -problem advection -CtauS .3 -stab su -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_kilogram 1e-9 -units_meter 1e-2 -units_second 1e-2 -advection_ic_bubble_rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -wind_type translation -wind_translation .53,-1.33,-2.65 -bc_inflow 1,2,3,4,5,6 -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename tests/output/adv-translation-implicit-stab-su.bin 225c9f37605SMohammed Amin //TESTARGS(name="Advection 2D, rotation, explicit, strong form") -ceed {ceed_resource} -test_type solver -problem advection -strong_form 1 -degree 3 -dm_plex_box_faces 2,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -units_meter 1e-2 -units_second 1e-2 -advection_ic_bubble_rc 100. -ts_dt 1e-3 -compare_final_state_atol 5E-11 -ts_max_steps 10 -compare_final_state_filename tests/output/adv2d-rotation-explicit-strong.bin 226c9f37605SMohammed Amin //TESTARGS(name="Advection 2D, rotation, implicit, SUPG stabilization") -ceed {ceed_resource} -test_type solver -problem advection -CtauS .3 -stab supg -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -units_meter 1e-2 -units_second 1e-2 -advection_ic_bubble_rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename tests/output/adv2d-rotation-implicit-stab-supg.bin 227ea615d4cSJames Wright //TESTARGS(name="Euler, implicit") -ceed {ceed_resource} -test_type solver -problem euler_vortex -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_meter 1e-4 -units_second 1e-4 -mean_velocity 1.4,-2.,0 -bc_inflow 4,6 -bc_outflow 3,5 -bc_symmetry_z 1,2 -vortex_strength 2 -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename tests/output/euler-implicit.bin 228ea615d4cSJames Wright //TESTARGS(name="Euler, explicit") -ceed {ceed_resource} -test_type solver -problem euler_vortex -degree 3 -q_extra 2 -dm_plex_box_faces 2,2,1 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_meter 1e-4 -units_second 1e-4 -mean_velocity 1.4,-2.,0 -bc_inflow 4,6 -bc_outflow 3,5 -bc_symmetry_z 1,2 -vortex_strength 2 -ts_dt 1e-7 -ts_rk_type 5bs -ts_rtol 1e-10 -ts_atol 1e-10 -ts_max_steps 10 -compare_final_state_atol 1E-7 -compare_final_state_filename tests/output/euler-explicit.bin 229c9f37605SMohammed Amin //TESTARGS(name="Sod Shocktube, explicit, SU stabilization, y-z-beta shock capturing") -ceed {ceed_resource} -test_type solver -problem shocktube -degree 1 -q_extra 2 -dm_plex_box_faces 50,1,1 -units_meter 1e-2 -units_second 1e-2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 1000,20,20 -dm_plex_dim 3 -bc_symmetry_x 5,6 -bc_symmetry_y 3,4 -bc_symmetry_z 1,2 -yzb -stab su -ts_max_steps 10 -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/shocktube-explicit-su-yzb.bin 230