1*ae2b091fSJames Wright // SPDX-FileCopyrightText: Copyright (c) 2017-2024, HONEE contributors. 2*ae2b091fSJames Wright // SPDX-License-Identifier: Apache-2.0 OR BSD-2-Clause 33a8779fbSJames Wright 43a8779fbSJames Wright /// @file 53a8779fbSJames Wright /// Operator for Navier-Stokes example using PETSc 63a8779fbSJames Wright #include <ceed.h> 7d0cce58aSJeremy L Thompson #include <math.h> 87b530f2aSAdelekeBankole #include <stdlib.h> 92b916ea7SJeremy L Thompson 10475b2820SJames Wright #include "newtonian_state.h" 11d0cce58aSJeremy L Thompson #include "newtonian_types.h" 12d1b9ef12SLeila Ghaffari #include "stabilization.h" 13d0cce58aSJeremy L Thompson #include "utils.h" 14bb8a0c61SJames Wright 1594a7b3d2SKenneth E. Jansen CEED_QFUNCTION_HELPER void InternalDampingLayer(const NewtonianIdealGasContext context, const State s, const CeedScalar sigma, CeedScalar damp_Y[5], 16e7754af5SKenneth E. Jansen CeedScalar damp_residual[5]) { 17e7754af5SKenneth E. Jansen ScaleN(damp_Y, sigma, 5); 18edcfef1bSKenneth E. Jansen State damp_s = StateFromY_fwd(context, s, damp_Y); 19e7754af5SKenneth E. Jansen 20e7754af5SKenneth E. Jansen CeedScalar U[5]; 21e7754af5SKenneth E. Jansen UnpackState_U(damp_s.U, U); 22e7754af5SKenneth E. Jansen for (int i = 0; i < 5; i++) damp_residual[i] += U[i]; 23e7754af5SKenneth E. Jansen } 24e7754af5SKenneth E. Jansen 25bb8a0c61SJames Wright // ***************************************************************************** 263a8779fbSJames Wright // This QFunction sets a "still" initial condition for generic Newtonian IG problems 273a8779fbSJames Wright // ***************************************************************************** 288fff8293SJames Wright CEED_QFUNCTION_HELPER int ICsNewtonianIG(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) { 293a8779fbSJames Wright CeedScalar(*q0)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 303a8779fbSJames Wright 31bb8a0c61SJames Wright const SetupContext context = (SetupContext)ctx; 32bb8a0c61SJames Wright 332b916ea7SJeremy L Thompson CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 34a541e550SJames Wright CeedScalar q[5]; 35edcfef1bSKenneth E. Jansen State s = StateFromPrimitive(&context->gas, context->reference); 368fff8293SJames Wright StateToQ(&context->gas, s, q, state_var); 372b916ea7SJeremy L Thompson for (CeedInt j = 0; j < 5; j++) q0[j][i] = q[j]; 38b193fadcSJames Wright } 393a8779fbSJames Wright return 0; 403a8779fbSJames Wright } 413a8779fbSJames Wright 429b103f75SJames Wright CEED_QFUNCTION(ICsNewtonianIG_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 439b103f75SJames Wright return ICsNewtonianIG(ctx, Q, in, out, STATEVAR_CONSERVATIVE); 449b103f75SJames Wright } 459b103f75SJames Wright 462b916ea7SJeremy L Thompson CEED_QFUNCTION(ICsNewtonianIG_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 478fff8293SJames Wright return ICsNewtonianIG(ctx, Q, in, out, STATEVAR_PRIMITIVE); 48b8fb7609SAdeleke O. Bankole } 499b103f75SJames Wright 509b103f75SJames Wright CEED_QFUNCTION(ICsNewtonianIG_Entropy)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 519b103f75SJames Wright return ICsNewtonianIG(ctx, Q, in, out, STATEVAR_ENTROPY); 52cbe60e31SLeila Ghaffari } 53cbe60e31SLeila Ghaffari 5465dee3d2SJames Wright CEED_QFUNCTION_HELPER void MassFunction_Newtonian(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, 5565dee3d2SJames Wright StateVariable state_var) { 5665dee3d2SJames Wright const CeedScalar(*q_dot)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0]; 5765dee3d2SJames Wright const CeedScalar(*q)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1]; 5865dee3d2SJames Wright const CeedScalar(*q_data) = in[2]; 5965dee3d2SJames Wright CeedScalar(*v)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 6065dee3d2SJames Wright CeedScalar(*Grad_v)[5][CEED_Q_VLA] = (CeedScalar(*)[5][CEED_Q_VLA])out[1]; 6165dee3d2SJames Wright 6265dee3d2SJames Wright NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx; 6365dee3d2SJames Wright 6465dee3d2SJames Wright CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 6565dee3d2SJames Wright const CeedScalar qi[5] = {q[0][i], q[1][i], q[2][i], q[3][i], q[4][i]}; 6665dee3d2SJames Wright const CeedScalar qi_dot[5] = {q_dot[0][i], q_dot[1][i], q_dot[2][i], q_dot[3][i], q_dot[4][i]}; 6765dee3d2SJames Wright const State s = StateFromQ(context, qi, state_var); 6865dee3d2SJames Wright const State s_dot = StateFromQ(context, qi_dot, state_var); 6965dee3d2SJames Wright CeedScalar wdetJ, dXdx[3][3]; 7065dee3d2SJames Wright QdataUnpack_3D(Q, i, q_data, &wdetJ, dXdx); 7165dee3d2SJames Wright 7265dee3d2SJames Wright // Standard mass matrix term 7365dee3d2SJames Wright for (CeedInt f = 0; f < 5; f++) { 7465dee3d2SJames Wright v[f][i] = wdetJ * qi_dot[f]; 7565dee3d2SJames Wright } 7665dee3d2SJames Wright 7765dee3d2SJames Wright // Stabilization method: none (Galerkin), SU, or SUPG 7865dee3d2SJames Wright State grad_s[3] = {{{0.}}}; 7965dee3d2SJames Wright CeedScalar Tau_d[3], stab[5][3], body_force[5] = {0.}, U_dot[5]; 8065dee3d2SJames Wright UnpackState_U(s_dot.U, U_dot); 8165dee3d2SJames Wright Tau_diagPrim(context, s, dXdx, context->dt, Tau_d); 8265dee3d2SJames Wright Stabilization(context, s, Tau_d, grad_s, U_dot, body_force, stab); 8365dee3d2SJames Wright 8465dee3d2SJames Wright // Stabilized mass term 8565dee3d2SJames Wright for (CeedInt j = 0; j < 5; j++) { 8665dee3d2SJames Wright for (CeedInt k = 0; k < 3; k++) { 8765dee3d2SJames Wright Grad_v[k][j][i] = wdetJ * (stab[j][0] * dXdx[k][0] + stab[j][1] * dXdx[k][1] + stab[j][2] * dXdx[k][2]); 8865dee3d2SJames Wright } 8965dee3d2SJames Wright } 9065dee3d2SJames Wright } 9165dee3d2SJames Wright } 9265dee3d2SJames Wright 9365dee3d2SJames Wright CEED_QFUNCTION(MassFunction_Newtonian_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 9465dee3d2SJames Wright MassFunction_Newtonian(ctx, Q, in, out, STATEVAR_CONSERVATIVE); 9565dee3d2SJames Wright return 0; 9665dee3d2SJames Wright } 9765dee3d2SJames Wright 98cbe60e31SLeila Ghaffari // ***************************************************************************** 9904e40bb6SJeremy L Thompson // This QFunction implements the following formulation of Navier-Stokes with explicit time stepping method 1003a8779fbSJames Wright // 10104e40bb6SJeremy L Thompson // This is 3D compressible Navier-Stokes in conservation form with state variables of density, momentum density, and total energy density. 1023a8779fbSJames Wright // 1033a8779fbSJames Wright // State Variables: q = ( rho, U1, U2, U3, E ) 1043a8779fbSJames Wright // rho - Mass Density 1053a8779fbSJames Wright // Ui - Momentum Density, Ui = rho ui 1063a8779fbSJames Wright // E - Total Energy Density, E = rho (cv T + (u u)/2 + g z) 1073a8779fbSJames Wright // 1083a8779fbSJames Wright // Navier-Stokes Equations: 1093a8779fbSJames Wright // drho/dt + div( U ) = 0 1103a8779fbSJames Wright // dU/dt + div( rho (u x u) + P I3 ) + rho g khat = div( Fu ) 1113a8779fbSJames Wright // dE/dt + div( (E + P) u ) = div( Fe ) 1123a8779fbSJames Wright // 1133a8779fbSJames Wright // Viscous Stress: 1143a8779fbSJames Wright // Fu = mu (grad( u ) + grad( u )^T + lambda div ( u ) I3) 1153a8779fbSJames Wright // 1163a8779fbSJames Wright // Thermal Stress: 1173a8779fbSJames Wright // Fe = u Fu + k grad( T ) 118bb8a0c61SJames Wright // Equation of State 1193a8779fbSJames Wright // P = (gamma - 1) (E - rho (u u) / 2 - rho g z) 1203a8779fbSJames Wright // 1213a8779fbSJames Wright // Stabilization: 1223a8779fbSJames Wright // Tau = diag(TauC, TauM, TauM, TauM, TauE) 1233a8779fbSJames Wright // f1 = rho sqrt(ui uj gij) 1243a8779fbSJames Wright // gij = dXi/dX * dXi/dX 1253a8779fbSJames Wright // TauC = Cc f1 / (8 gii) 1263a8779fbSJames Wright // TauM = min( 1 , 1 / f1 ) 1273a8779fbSJames Wright // TauE = TauM / (Ce cv) 1283a8779fbSJames Wright // 1293a8779fbSJames Wright // SU = Galerkin + grad(v) . ( Ai^T * Tau * (Aj q,j) ) 1303a8779fbSJames Wright // 1313a8779fbSJames Wright // Constants: 1323a8779fbSJames Wright // lambda = - 2 / 3, From Stokes hypothesis 1333a8779fbSJames Wright // mu , Dynamic viscosity 1343a8779fbSJames Wright // k , Thermal conductivity 1353a8779fbSJames Wright // cv , Specific heat, constant volume 1363a8779fbSJames Wright // cp , Specific heat, constant pressure 1373a8779fbSJames Wright // g , Gravity 1383a8779fbSJames Wright // gamma = cp / cv, Specific heat ratio 1393a8779fbSJames Wright // 14004e40bb6SJeremy L Thompson // We require the product of the inverse of the Jacobian (dXdx_j,k) and its transpose (dXdx_k,j) to properly compute integrals of the form: int( gradv 14104e40bb6SJeremy L Thompson // gradu ) 1423a8779fbSJames Wright // ***************************************************************************** 1432b916ea7SJeremy L Thompson CEED_QFUNCTION(RHSFunction_Newtonian)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 1443d65b166SJames Wright const CeedScalar(*q)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0]; 14587bd45e7SJames Wright const CeedScalar(*Grad_q) = in[1]; 146ade49511SJames Wright const CeedScalar(*q_data) = in[2]; 1470a32a5aaSJames Wright const CeedScalar(*x)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[3]; 1483d65b166SJames Wright CeedScalar(*v)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 1493d65b166SJames Wright CeedScalar(*Grad_v)[5][CEED_Q_VLA] = (CeedScalar(*)[5][CEED_Q_VLA])out[1]; 1503a8779fbSJames Wright 1513a8779fbSJames Wright NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx; 152bb8a0c61SJames Wright const CeedScalar *g = context->g; 153bb8a0c61SJames Wright const CeedScalar dt = context->dt; 1540a32a5aaSJames Wright const CeedScalar P0 = context->idl_pressure; 1553a8779fbSJames Wright 1563d65b166SJames Wright CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 157ade49511SJames Wright CeedScalar U[5], wdetJ, dXdx[3][3]; 1580a32a5aaSJames Wright const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]}; 159c1a52365SJed Brown for (int j = 0; j < 5; j++) U[j] = q[j][i]; 1601be49596SJames Wright QdataUnpack_3D(Q, i, q_data, &wdetJ, dXdx); 161edcfef1bSKenneth E. Jansen State s = StateFromU(context, U); 162c1a52365SJed Brown 163c1a52365SJed Brown State grad_s[3]; 164edcfef1bSKenneth E. Jansen StatePhysicalGradientFromReference(Q, i, context, s, STATEVAR_CONSERVATIVE, Grad_q, dXdx, grad_s); 165c1a52365SJed Brown 166c1a52365SJed Brown CeedScalar strain_rate[6], kmstress[6], stress[3][3], Fe[3]; 16740a33f2dSJames Wright KMStrainRate_State(grad_s, strain_rate); 168c1a52365SJed Brown NewtonianStress(context, strain_rate, kmstress); 169c1a52365SJed Brown KMUnpack(kmstress, stress); 170c1a52365SJed Brown ViscousEnergyFlux(context, s.Y, grad_s, stress, Fe); 171c1a52365SJed Brown 172c1a52365SJed Brown StateConservative F_inviscid[3]; 173c1a52365SJed Brown FluxInviscid(context, s, F_inviscid); 174c1a52365SJed Brown 175c1a52365SJed Brown // Total flux 176c1a52365SJed Brown CeedScalar Flux[5][3]; 177d1b9ef12SLeila Ghaffari FluxTotal(F_inviscid, stress, Fe, Flux); 178c1a52365SJed Brown 1797523f6aaSJames Wright for (CeedInt j = 0; j < 5; j++) { 1807523f6aaSJames Wright for (CeedInt k = 0; k < 3; k++) Grad_v[k][j][i] = wdetJ * (dXdx[k][0] * Flux[j][0] + dXdx[k][1] * Flux[j][1] + dXdx[k][2] * Flux[j][2]); 1812b916ea7SJeremy L Thompson } 182c1a52365SJed Brown 18360dbb574SKenneth E. Jansen const CeedScalar body_force[5] = {0, s.U.density * g[0], s.U.density * g[1], s.U.density * g[2], Dot3(s.U.momentum, g)}; 1842b916ea7SJeremy L Thompson for (int j = 0; j < 5; j++) v[j][i] = wdetJ * body_force[j]; 1853a8779fbSJames Wright 1860a32a5aaSJames Wright if (context->idl_enable) { 1870a32a5aaSJames Wright const CeedScalar sigma = LinearRampCoefficient(context->idl_amplitude, context->idl_length, context->idl_start, x_i[0]); 1880a32a5aaSJames Wright CeedScalar damp_state[5] = {s.Y.pressure - P0, 0, 0, 0, 0}, idl_residual[5] = {0.}; 1890a32a5aaSJames Wright InternalDampingLayer(context, s, sigma, damp_state, idl_residual); 1900a32a5aaSJames Wright for (int j = 0; j < 5; j++) v[j][i] -= wdetJ * idl_residual[j]; 1910a32a5aaSJames Wright } 1920a32a5aaSJames Wright 193d1b9ef12SLeila Ghaffari // -- Stabilization method: none (Galerkin), SU, or SUPG 194d1b9ef12SLeila Ghaffari CeedScalar Tau_d[3], stab[5][3], U_dot[5] = {0}; 195d1b9ef12SLeila Ghaffari Tau_diagPrim(context, s, dXdx, dt, Tau_d); 196edcfef1bSKenneth E. Jansen Stabilization(context, s, Tau_d, grad_s, U_dot, body_force, stab); 1973a8779fbSJames Wright 1982b916ea7SJeremy L Thompson for (CeedInt j = 0; j < 5; j++) { 1992b916ea7SJeremy L Thompson for (CeedInt k = 0; k < 3; k++) Grad_v[k][j][i] -= wdetJ * (stab[j][0] * dXdx[k][0] + stab[j][1] * dXdx[k][1] + stab[j][2] * dXdx[k][2]); 2002b916ea7SJeremy L Thompson } 201b193fadcSJames Wright } 2023a8779fbSJames Wright return 0; 2033a8779fbSJames Wright } 2043a8779fbSJames Wright 2053a8779fbSJames Wright // ***************************************************************************** 20604e40bb6SJeremy L Thompson // This QFunction implements the Navier-Stokes equations (mentioned above) with implicit time stepping method 2073a8779fbSJames Wright // 2083a8779fbSJames Wright // SU = Galerkin + grad(v) . ( Ai^T * Tau * (Aj q,j) ) 2093a8779fbSJames Wright // SUPG = Galerkin + grad(v) . ( Ai^T * Tau * (q_dot + Aj q,j - body force) ) 21004e40bb6SJeremy L Thompson // (diffusive terms will be added later) 2113a8779fbSJames Wright // ***************************************************************************** 2128fff8293SJames Wright CEED_QFUNCTION_HELPER int IFunction_Newtonian(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) { 2133d65b166SJames Wright const CeedScalar(*q)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0]; 21487bd45e7SJames Wright const CeedScalar(*Grad_q) = in[1]; 2153d65b166SJames Wright const CeedScalar(*q_dot)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[2]; 216ade49511SJames Wright const CeedScalar(*q_data) = in[3]; 2173d65b166SJames Wright const CeedScalar(*x)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[4]; 2183d65b166SJames Wright CeedScalar(*v)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 2193d65b166SJames Wright CeedScalar(*Grad_v)[5][CEED_Q_VLA] = (CeedScalar(*)[5][CEED_Q_VLA])out[1]; 220ade49511SJames Wright CeedScalar(*jac_data) = out[2]; 2213d65b166SJames Wright 2223a8779fbSJames Wright NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx; 223bb8a0c61SJames Wright const CeedScalar *g = context->g; 224bb8a0c61SJames Wright const CeedScalar dt = context->dt; 225fcb2c22aSJames Wright const CeedScalar P0 = context->idl_pressure; 2263a8779fbSJames Wright 2273d65b166SJames Wright CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 2283d65b166SJames Wright const CeedScalar qi[5] = {q[0][i], q[1][i], q[2][i], q[3][i], q[4][i]}; 229c1a52365SJed Brown const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]}; 230edcfef1bSKenneth E. Jansen const State s = StateFromQ(context, qi, state_var); 231c1a52365SJed Brown 232ade49511SJames Wright CeedScalar wdetJ, dXdx[3][3]; 233ade49511SJames Wright QdataUnpack_3D(Q, i, q_data, &wdetJ, dXdx); 234c1a52365SJed Brown State grad_s[3]; 235edcfef1bSKenneth E. Jansen StatePhysicalGradientFromReference(Q, i, context, s, state_var, Grad_q, dXdx, grad_s); 236c1a52365SJed Brown 237c1a52365SJed Brown CeedScalar strain_rate[6], kmstress[6], stress[3][3], Fe[3]; 23840a33f2dSJames Wright KMStrainRate_State(grad_s, strain_rate); 239c1a52365SJed Brown NewtonianStress(context, strain_rate, kmstress); 240c1a52365SJed Brown KMUnpack(kmstress, stress); 241c1a52365SJed Brown ViscousEnergyFlux(context, s.Y, grad_s, stress, Fe); 242c1a52365SJed Brown 243c1a52365SJed Brown StateConservative F_inviscid[3]; 244c1a52365SJed Brown FluxInviscid(context, s, F_inviscid); 245c1a52365SJed Brown 246c1a52365SJed Brown // Total flux 247c1a52365SJed Brown CeedScalar Flux[5][3]; 248d1b9ef12SLeila Ghaffari FluxTotal(F_inviscid, stress, Fe, Flux); 249c1a52365SJed Brown 2507523f6aaSJames Wright for (CeedInt j = 0; j < 5; j++) { 2517523f6aaSJames Wright for (CeedInt k = 0; k < 3; k++) { 2527523f6aaSJames Wright Grad_v[k][j][i] = -wdetJ * (dXdx[k][0] * Flux[j][0] + dXdx[k][1] * Flux[j][1] + dXdx[k][2] * Flux[j][2]); 2533d65b166SJames Wright } 2542b916ea7SJeremy L Thompson } 255c1a52365SJed Brown 25660dbb574SKenneth E. Jansen const CeedScalar body_force[5] = {0, s.U.density * g[0], s.U.density * g[1], s.U.density * g[2], Dot3(s.U.momentum, g)}; 2573a8779fbSJames Wright 258d1b9ef12SLeila Ghaffari // -- Stabilization method: none (Galerkin), SU, or SUPG 259edcfef1bSKenneth E. Jansen CeedScalar Tau_d[3], stab[5][3], U_dot[5] = {0}, qi_dot[5]; 26076555becSJames Wright for (int j = 0; j < 5; j++) qi_dot[j] = q_dot[j][i]; 261edcfef1bSKenneth E. Jansen State s_dot = StateFromQ_fwd(context, s, qi_dot, state_var); 26276555becSJames Wright UnpackState_U(s_dot.U, U_dot); 26376555becSJames Wright 2642b916ea7SJeremy L Thompson for (CeedInt j = 0; j < 5; j++) v[j][i] = wdetJ * (U_dot[j] - body_force[j]); 265e7754af5SKenneth E. Jansen if (context->idl_enable) { 26694a7b3d2SKenneth E. Jansen const CeedScalar sigma = LinearRampCoefficient(context->idl_amplitude, context->idl_length, context->idl_start, x_i[0]); 26794a7b3d2SKenneth E. Jansen StoredValuesPack(Q, i, 14, 1, &sigma, jac_data); 268e7754af5SKenneth E. Jansen CeedScalar damp_state[5] = {s.Y.pressure - P0, 0, 0, 0, 0}, idl_residual[5] = {0.}; 26994a7b3d2SKenneth E. Jansen InternalDampingLayer(context, s, sigma, damp_state, idl_residual); 270e7754af5SKenneth E. Jansen for (int j = 0; j < 5; j++) v[j][i] += wdetJ * idl_residual[j]; 271e7754af5SKenneth E. Jansen } 272e7754af5SKenneth E. Jansen 273d1b9ef12SLeila Ghaffari Tau_diagPrim(context, s, dXdx, dt, Tau_d); 274edcfef1bSKenneth E. Jansen Stabilization(context, s, Tau_d, grad_s, U_dot, body_force, stab); 2753a8779fbSJames Wright 2762b916ea7SJeremy L Thompson for (CeedInt j = 0; j < 5; j++) { 2773d65b166SJames Wright for (CeedInt k = 0; k < 3; k++) { 2783d65b166SJames Wright Grad_v[k][j][i] += wdetJ * (stab[j][0] * dXdx[k][0] + stab[j][1] * dXdx[k][1] + stab[j][2] * dXdx[k][2]); 2793d65b166SJames Wright } 2802b916ea7SJeremy L Thompson } 281ade49511SJames Wright StoredValuesPack(Q, i, 0, 5, qi, jac_data); 282ade49511SJames Wright StoredValuesPack(Q, i, 5, 6, kmstress, jac_data); 283ade49511SJames Wright StoredValuesPack(Q, i, 11, 3, Tau_d, jac_data); 284b193fadcSJames Wright } 2853a8779fbSJames Wright return 0; 2863a8779fbSJames Wright } 287f0b65372SJed Brown 2882b916ea7SJeremy L Thompson CEED_QFUNCTION(IFunction_Newtonian_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 2898fff8293SJames Wright return IFunction_Newtonian(ctx, Q, in, out, STATEVAR_CONSERVATIVE); 29076555becSJames Wright } 29176555becSJames Wright 2922b916ea7SJeremy L Thompson CEED_QFUNCTION(IFunction_Newtonian_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 2938fff8293SJames Wright return IFunction_Newtonian(ctx, Q, in, out, STATEVAR_PRIMITIVE); 29476555becSJames Wright } 29576555becSJames Wright 2969b103f75SJames Wright CEED_QFUNCTION(IFunction_Newtonian_Entropy)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 2979b103f75SJames Wright return IFunction_Newtonian(ctx, Q, in, out, STATEVAR_ENTROPY); 2989b103f75SJames Wright } 2999b103f75SJames Wright 300cbe60e31SLeila Ghaffari // ***************************************************************************** 30104e40bb6SJeremy L Thompson // This QFunction implements the jacobian of the Navier-Stokes equations for implicit time stepping method. 302cbe60e31SLeila Ghaffari // ***************************************************************************** 3038fff8293SJames Wright CEED_QFUNCTION_HELPER int IJacobian_Newtonian(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) { 3043d65b166SJames Wright const CeedScalar(*dq)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0]; 30587bd45e7SJames Wright const CeedScalar(*Grad_dq) = in[1]; 306ade49511SJames Wright const CeedScalar(*q_data) = in[2]; 30794a7b3d2SKenneth E. Jansen const CeedScalar(*jac_data) = in[3]; 3083d65b166SJames Wright CeedScalar(*v)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 3093d65b166SJames Wright CeedScalar(*Grad_v)[5][CEED_Q_VLA] = (CeedScalar(*)[5][CEED_Q_VLA])out[1]; 3103d65b166SJames Wright 311f0b65372SJed Brown NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx; 312f0b65372SJed Brown const CeedScalar *g = context->g; 313f0b65372SJed Brown 3143d65b166SJames Wright CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 315ade49511SJames Wright CeedScalar wdetJ, dXdx[3][3]; 316ade49511SJames Wright QdataUnpack_3D(Q, i, q_data, &wdetJ, dXdx); 317f0b65372SJed Brown 3188789e95fSJames Wright CeedScalar qi[5], kmstress[6], Tau_d[3]; 319ade49511SJames Wright StoredValuesUnpack(Q, i, 0, 5, jac_data, qi); 320ade49511SJames Wright StoredValuesUnpack(Q, i, 5, 6, jac_data, kmstress); 321ade49511SJames Wright StoredValuesUnpack(Q, i, 11, 3, jac_data, Tau_d); 322edcfef1bSKenneth E. Jansen State s = StateFromQ(context, qi, state_var); 323f0b65372SJed Brown 324edcfef1bSKenneth E. Jansen CeedScalar dqi[5]; 32576555becSJames Wright for (int j = 0; j < 5; j++) dqi[j] = dq[j][i]; 326edcfef1bSKenneth E. Jansen State ds = StateFromQ_fwd(context, s, dqi, state_var); 327f0b65372SJed Brown 328f0b65372SJed Brown State grad_ds[3]; 329edcfef1bSKenneth E. Jansen StatePhysicalGradientFromReference(Q, i, context, s, state_var, Grad_dq, dXdx, grad_ds); 330f0b65372SJed Brown 331f0b65372SJed Brown CeedScalar dstrain_rate[6], dkmstress[6], stress[3][3], dstress[3][3], dFe[3]; 33240a33f2dSJames Wright KMStrainRate_State(grad_ds, dstrain_rate); 333f0b65372SJed Brown NewtonianStress(context, dstrain_rate, dkmstress); 334f0b65372SJed Brown KMUnpack(dkmstress, dstress); 335f0b65372SJed Brown KMUnpack(kmstress, stress); 336f0b65372SJed Brown ViscousEnergyFlux_fwd(context, s.Y, ds.Y, grad_ds, stress, dstress, dFe); 337f0b65372SJed Brown 338f0b65372SJed Brown StateConservative dF_inviscid[3]; 339f0b65372SJed Brown FluxInviscid_fwd(context, s, ds, dF_inviscid); 340f0b65372SJed Brown 341f0b65372SJed Brown // Total flux 342f0b65372SJed Brown CeedScalar dFlux[5][3]; 343d1b9ef12SLeila Ghaffari FluxTotal(dF_inviscid, dstress, dFe, dFlux); 344f0b65372SJed Brown 34522387d3aSJames Wright for (int j = 0; j < 5; j++) { 34622387d3aSJames Wright for (int k = 0; k < 3; k++) Grad_v[k][j][i] = -wdetJ * (dXdx[k][0] * dFlux[j][0] + dXdx[k][1] * dFlux[j][1] + dXdx[k][2] * dFlux[j][2]); 3472b916ea7SJeremy L Thompson } 348f0b65372SJed Brown 34960dbb574SKenneth E. Jansen const CeedScalar dbody_force[5] = {0, ds.U.density * g[0], ds.U.density * g[1], ds.U.density * g[2], Dot3(ds.U.momentum, g)}; 35076555becSJames Wright CeedScalar dU[5] = {0.}; 35176555becSJames Wright UnpackState_U(ds.U, dU); 3522b916ea7SJeremy L Thompson for (int j = 0; j < 5; j++) v[j][i] = wdetJ * (context->ijacobian_time_shift * dU[j] - dbody_force[j]); 353f0b65372SJed Brown 354e7754af5SKenneth E. Jansen if (context->idl_enable) { 35594a7b3d2SKenneth E. Jansen const CeedScalar sigma = jac_data[14 * Q + i]; 356e7754af5SKenneth E. Jansen CeedScalar damp_state[5] = {ds.Y.pressure, 0, 0, 0, 0}, idl_residual[5] = {0.}; 357e7754af5SKenneth E. Jansen // This is a Picard-type linearization of the damping and could be replaced by an InternalDampingLayer_fwd that uses s and ds. 35894a7b3d2SKenneth E. Jansen InternalDampingLayer(context, s, sigma, damp_state, idl_residual); 359e7754af5SKenneth E. Jansen for (int j = 0; j < 5; j++) v[j][i] += wdetJ * idl_residual[j]; 360e7754af5SKenneth E. Jansen } 361e7754af5SKenneth E. Jansen 362d1b9ef12SLeila Ghaffari // -- Stabilization method: none (Galerkin), SU, or SUPG 363d1b9ef12SLeila Ghaffari CeedScalar dstab[5][3], U_dot[5] = {0}; 364d1b9ef12SLeila Ghaffari for (CeedInt j = 0; j < 5; j++) U_dot[j] = context->ijacobian_time_shift * dU[j]; 365edcfef1bSKenneth E. Jansen Stabilization(context, s, Tau_d, grad_ds, U_dot, dbody_force, dstab); 366d1b9ef12SLeila Ghaffari 3672b916ea7SJeremy L Thompson for (int j = 0; j < 5; j++) { 3682b916ea7SJeremy L Thompson for (int k = 0; k < 3; k++) Grad_v[k][j][i] += wdetJ * (dstab[j][0] * dXdx[k][0] + dstab[j][1] * dXdx[k][1] + dstab[j][2] * dXdx[k][2]); 3692b916ea7SJeremy L Thompson } 370b193fadcSJames Wright } 371f0b65372SJed Brown return 0; 372f0b65372SJed Brown } 3738085925cSJames Wright 3742b916ea7SJeremy L Thompson CEED_QFUNCTION(IJacobian_Newtonian_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 3758fff8293SJames Wright return IJacobian_Newtonian(ctx, Q, in, out, STATEVAR_CONSERVATIVE); 37676555becSJames Wright } 37776555becSJames Wright 3782b916ea7SJeremy L Thompson CEED_QFUNCTION(IJacobian_Newtonian_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 3798fff8293SJames Wright return IJacobian_Newtonian(ctx, Q, in, out, STATEVAR_PRIMITIVE); 38076555becSJames Wright } 38176555becSJames Wright 3829b103f75SJames Wright CEED_QFUNCTION(IJacobian_Newtonian_Entropy)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 3839b103f75SJames Wright return IJacobian_Newtonian(ctx, Q, in, out, STATEVAR_ENTROPY); 3849b103f75SJames Wright } 3859b103f75SJames Wright 386d1b9ef12SLeila Ghaffari // ***************************************************************************** 3878085925cSJames Wright // Compute boundary integral (ie. for strongly set inflows) 388d1b9ef12SLeila Ghaffari // ***************************************************************************** 3898fff8293SJames Wright CEED_QFUNCTION_HELPER int BoundaryIntegral(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) { 3904b96a86bSJames Wright const NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx; 3913d65b166SJames Wright const CeedScalar(*q)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0]; 39287bd45e7SJames Wright const CeedScalar(*Grad_q) = in[1]; 393ade49511SJames Wright const CeedScalar(*q_data_sur) = in[2]; 3943d65b166SJames Wright CeedScalar(*v)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 3954b96a86bSJames Wright CeedScalar(*jac_data_sur) = context->is_implicit ? out[1] : NULL; 3968085925cSJames Wright 397d3b25f3aSJames Wright const bool is_implicit = context->is_implicit; 3988085925cSJames Wright 3992b916ea7SJeremy L Thompson CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 40041e73928SJames Wright const CeedScalar qi[5] = {q[0][i], q[1][i], q[2][i], q[3][i], q[4][i]}; 401edcfef1bSKenneth E. Jansen State s = StateFromQ(context, qi, state_var); 4028085925cSJames Wright 403ade49511SJames Wright CeedScalar wdetJb, dXdx[2][3], norm[3]; 404ade49511SJames Wright QdataBoundaryUnpack_3D(Q, i, q_data_sur, &wdetJb, dXdx, norm); 405ade49511SJames Wright wdetJb *= is_implicit ? -1. : 1.; 4068085925cSJames Wright 407d3b25f3aSJames Wright State grad_s[3]; 408edcfef1bSKenneth E. Jansen StatePhysicalGradientFromReference_Boundary(Q, i, context, s, state_var, Grad_q, dXdx, grad_s); 4098085925cSJames Wright 410d3b25f3aSJames Wright CeedScalar strain_rate[6], kmstress[6], stress[3][3], Fe[3]; 41140a33f2dSJames Wright KMStrainRate_State(grad_s, strain_rate); 412d3b25f3aSJames Wright NewtonianStress(context, strain_rate, kmstress); 413d3b25f3aSJames Wright KMUnpack(kmstress, stress); 414d3b25f3aSJames Wright ViscousEnergyFlux(context, s.Y, grad_s, stress, Fe); 415d3b25f3aSJames Wright 416d3b25f3aSJames Wright StateConservative F_inviscid[3]; 417d3b25f3aSJames Wright FluxInviscid(context, s, F_inviscid); 418d3b25f3aSJames Wright 419c5740391SJames Wright CeedScalar Flux[5]; 420c5740391SJames Wright FluxTotal_Boundary(F_inviscid, stress, Fe, norm, Flux); 421d3b25f3aSJames Wright 422c5740391SJames Wright for (CeedInt j = 0; j < 5; j++) v[j][i] = -wdetJb * Flux[j]; 4238085925cSJames Wright 4244b96a86bSJames Wright if (is_implicit) { 425ade49511SJames Wright StoredValuesPack(Q, i, 0, 5, qi, jac_data_sur); 426ade49511SJames Wright StoredValuesPack(Q, i, 5, 6, kmstress, jac_data_sur); 4278085925cSJames Wright } 4284b96a86bSJames Wright } 4298085925cSJames Wright return 0; 4308085925cSJames Wright } 4318085925cSJames Wright 4322b916ea7SJeremy L Thompson CEED_QFUNCTION(BoundaryIntegral_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 4338fff8293SJames Wright return BoundaryIntegral(ctx, Q, in, out, STATEVAR_CONSERVATIVE); 434d4559bbeSJames Wright } 435d4559bbeSJames Wright 4362b916ea7SJeremy L Thompson CEED_QFUNCTION(BoundaryIntegral_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 4378fff8293SJames Wright return BoundaryIntegral(ctx, Q, in, out, STATEVAR_PRIMITIVE); 438d4559bbeSJames Wright } 439d4559bbeSJames Wright 4409b103f75SJames Wright CEED_QFUNCTION(BoundaryIntegral_Entropy)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 4419b103f75SJames Wright return BoundaryIntegral(ctx, Q, in, out, STATEVAR_ENTROPY); 4429b103f75SJames Wright } 4439b103f75SJames Wright 444d1b9ef12SLeila Ghaffari // ***************************************************************************** 44568ae065aSJames Wright // Jacobian for "set nothing" boundary integral 446d1b9ef12SLeila Ghaffari // ***************************************************************************** 4472b916ea7SJeremy L Thompson CEED_QFUNCTION_HELPER int BoundaryIntegral_Jacobian(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, 4488fff8293SJames Wright StateVariable state_var) { 4493d65b166SJames Wright const CeedScalar(*dq)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0]; 45087bd45e7SJames Wright const CeedScalar(*Grad_dq) = in[1]; 451ade49511SJames Wright const CeedScalar(*q_data_sur) = in[2]; 452c1484fadSKenneth E. Jansen const CeedScalar(*jac_data_sur) = in[4]; 45368ae065aSJames Wright CeedScalar(*v)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 45468ae065aSJames Wright 45568ae065aSJames Wright const NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx; 456ade49511SJames Wright const bool is_implicit = context->is_implicit; 45768ae065aSJames Wright 4583d65b166SJames Wright CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 459ade49511SJames Wright CeedScalar wdetJb, dXdx[2][3], norm[3]; 460ade49511SJames Wright QdataBoundaryUnpack_3D(Q, i, q_data_sur, &wdetJb, dXdx, norm); 461ade49511SJames Wright wdetJb *= is_implicit ? -1. : 1.; 46268ae065aSJames Wright 463edcfef1bSKenneth E. Jansen CeedScalar qi[5], kmstress[6], dqi[5]; 464ade49511SJames Wright StoredValuesUnpack(Q, i, 0, 5, jac_data_sur, qi); 465ade49511SJames Wright StoredValuesUnpack(Q, i, 5, 6, jac_data_sur, kmstress); 46641e73928SJames Wright for (int j = 0; j < 5; j++) dqi[j] = dq[j][i]; 4673934e2b1SJames Wright 468edcfef1bSKenneth E. Jansen State s = StateFromQ(context, qi, state_var); 469edcfef1bSKenneth E. Jansen State ds = StateFromQ_fwd(context, s, dqi, state_var); 47068ae065aSJames Wright 47168ae065aSJames Wright State grad_ds[3]; 472edcfef1bSKenneth E. Jansen StatePhysicalGradientFromReference_Boundary(Q, i, context, s, state_var, Grad_dq, dXdx, grad_ds); 47368ae065aSJames Wright 47468ae065aSJames Wright CeedScalar dstrain_rate[6], dkmstress[6], stress[3][3], dstress[3][3], dFe[3]; 47540a33f2dSJames Wright KMStrainRate_State(grad_ds, dstrain_rate); 47668ae065aSJames Wright NewtonianStress(context, dstrain_rate, dkmstress); 47768ae065aSJames Wright KMUnpack(dkmstress, dstress); 47868ae065aSJames Wright KMUnpack(kmstress, stress); 47968ae065aSJames Wright ViscousEnergyFlux_fwd(context, s.Y, ds.Y, grad_ds, stress, dstress, dFe); 48068ae065aSJames Wright 48168ae065aSJames Wright StateConservative dF_inviscid[3]; 48268ae065aSJames Wright FluxInviscid_fwd(context, s, ds, dF_inviscid); 48368ae065aSJames Wright 484c5740391SJames Wright CeedScalar dFlux[5]; 485c5740391SJames Wright FluxTotal_Boundary(dF_inviscid, dstress, dFe, norm, dFlux); 48668ae065aSJames Wright 487c5740391SJames Wright for (int j = 0; j < 5; j++) v[j][i] = -wdetJb * dFlux[j]; 488512c8ec7SJames Wright } 48968ae065aSJames Wright return 0; 49068ae065aSJames Wright } 49168ae065aSJames Wright 4922b916ea7SJeremy L Thompson CEED_QFUNCTION(BoundaryIntegral_Jacobian_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 4938fff8293SJames Wright return BoundaryIntegral_Jacobian(ctx, Q, in, out, STATEVAR_CONSERVATIVE); 494d4559bbeSJames Wright } 495d4559bbeSJames Wright 4962b916ea7SJeremy L Thompson CEED_QFUNCTION(BoundaryIntegral_Jacobian_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 4978fff8293SJames Wright return BoundaryIntegral_Jacobian(ctx, Q, in, out, STATEVAR_PRIMITIVE); 498d4559bbeSJames Wright } 4999b103f75SJames Wright 5009b103f75SJames Wright CEED_QFUNCTION(BoundaryIntegral_Jacobian_Entropy)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 5019b103f75SJames Wright return BoundaryIntegral_Jacobian(ctx, Q, in, out, STATEVAR_ENTROPY); 5029b103f75SJames Wright } 503