xref: /honee/qfunctions/stg_shur14.h (revision 21ba7ba458ca7fbd5416be1f0b0586f2885778ca)
1dc936754SJeremy L Thompson // Copyright (c) 2017-2024, Lawrence Livermore National Security, LLC and other CEED contributors.
2493642f1SJames Wright // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3493642f1SJames Wright //
4493642f1SJames Wright // SPDX-License-Identifier: BSD-2-Clause
5493642f1SJames Wright //
6493642f1SJames Wright // This file is part of CEED:  http://github.com/ceed
7493642f1SJames Wright 
8493642f1SJames Wright /// @file
9493642f1SJames Wright /// Implementation of the Synthetic Turbulence Generation (STG) algorithm
10493642f1SJames Wright /// presented in Shur et al. 2014
11493642f1SJames Wright //
1204e40bb6SJeremy L Thompson /// SetupSTG_Rand reads in the input files and fills in STGShur14Context.
1304e40bb6SJeremy L Thompson /// Then STGShur14_CalcQF is run over quadrature points.
1404e40bb6SJeremy L Thompson /// Before the program exits, TearDownSTG is run to free the memory of the allocated arrays.
15493642f1SJames Wright #include <ceed.h>
16d0cce58aSJeremy L Thompson #include <math.h>
17493642f1SJames Wright #include <stdlib.h>
182b916ea7SJeremy L Thompson 
193d65b166SJames Wright #include "newtonian_state.h"
201a74fa30SJames Wright #include "setupgeo_helpers.h"
21493642f1SJames Wright #include "stg_shur14_type.h"
22704b8bbeSJames Wright #include "utils.h"
23493642f1SJames Wright 
24493642f1SJames Wright #define STG_NMODES_MAX 1024
25493642f1SJames Wright 
26493642f1SJames Wright /*
27493642f1SJames Wright  * @brief Interpolate quantities from input profile to given location
28493642f1SJames Wright  *
29c77f3192SJames Wright  * Assumed that prof_wd[i+1] > prof_wd[i] and prof_wd[0] = 0
30c77f3192SJames Wright  * If wall_dist > prof_wd[-1], then the interpolation takes the values at prof_wd[-1]
31493642f1SJames Wright  *
32c77f3192SJames Wright  * @param[in]  wall_dist Distance to the nearest wall
33c77f3192SJames Wright  * @param[out] ubar      Mean velocity at wall_dist
34c77f3192SJames Wright  * @param[out] cij       Cholesky decomposition at wall_dist
35c77f3192SJames Wright  * @param[out] eps       Turbulent dissipation at wall_dist
36c77f3192SJames Wright  * @param[out] lt        Turbulent length scale at wall_dist
37493642f1SJames Wright  * @param[in]  stg_ctx   STGShur14Context for the problem
38493642f1SJames Wright  */
392b916ea7SJeremy L Thompson CEED_QFUNCTION_HELPER void InterpolateProfile(const CeedScalar wall_dist, CeedScalar ubar[3], CeedScalar cij[6], CeedScalar *eps, CeedScalar *lt,
4042454adaSJames Wright                                               const StgShur14Context stg_ctx) {
41493642f1SJames Wright   const CeedInt     nprofs    = stg_ctx->nprofs;
42c77f3192SJames Wright   const CeedScalar *prof_wd   = &stg_ctx->data[stg_ctx->offsets.wall_dist];
43493642f1SJames Wright   const CeedScalar *prof_eps  = &stg_ctx->data[stg_ctx->offsets.eps];
44493642f1SJames Wright   const CeedScalar *prof_lt   = &stg_ctx->data[stg_ctx->offsets.lt];
45493642f1SJames Wright   const CeedScalar *prof_ubar = &stg_ctx->data[stg_ctx->offsets.ubar];
46493642f1SJames Wright   const CeedScalar *prof_cij  = &stg_ctx->data[stg_ctx->offsets.cij];
47493642f1SJames Wright   CeedInt           idx       = -1;
48493642f1SJames Wright 
49493642f1SJames Wright   for (CeedInt i = 0; i < nprofs; i++) {
50c77f3192SJames Wright     if (wall_dist < prof_wd[i]) {
51493642f1SJames Wright       idx = i;
52493642f1SJames Wright       break;
53493642f1SJames Wright     }
54493642f1SJames Wright   }
55493642f1SJames Wright 
56c77f3192SJames Wright   if (idx > 0) {  // y within the bounds of prof_wd
57c77f3192SJames Wright     CeedScalar coeff = (wall_dist - prof_wd[idx - 1]) / (prof_wd[idx] - prof_wd[idx - 1]);
58c77f3192SJames Wright 
59493642f1SJames Wright     ubar[0] = prof_ubar[0 * nprofs + idx - 1] + coeff * (prof_ubar[0 * nprofs + idx] - prof_ubar[0 * nprofs + idx - 1]);
60493642f1SJames Wright     ubar[1] = prof_ubar[1 * nprofs + idx - 1] + coeff * (prof_ubar[1 * nprofs + idx] - prof_ubar[1 * nprofs + idx - 1]);
61493642f1SJames Wright     ubar[2] = prof_ubar[2 * nprofs + idx - 1] + coeff * (prof_ubar[2 * nprofs + idx] - prof_ubar[2 * nprofs + idx - 1]);
62493642f1SJames Wright     cij[0]  = prof_cij[0 * nprofs + idx - 1] + coeff * (prof_cij[0 * nprofs + idx] - prof_cij[0 * nprofs + idx - 1]);
63493642f1SJames Wright     cij[1]  = prof_cij[1 * nprofs + idx - 1] + coeff * (prof_cij[1 * nprofs + idx] - prof_cij[1 * nprofs + idx - 1]);
64493642f1SJames Wright     cij[2]  = prof_cij[2 * nprofs + idx - 1] + coeff * (prof_cij[2 * nprofs + idx] - prof_cij[2 * nprofs + idx - 1]);
65493642f1SJames Wright     cij[3]  = prof_cij[3 * nprofs + idx - 1] + coeff * (prof_cij[3 * nprofs + idx] - prof_cij[3 * nprofs + idx - 1]);
66493642f1SJames Wright     cij[4]  = prof_cij[4 * nprofs + idx - 1] + coeff * (prof_cij[4 * nprofs + idx] - prof_cij[4 * nprofs + idx - 1]);
67493642f1SJames Wright     cij[5]  = prof_cij[5 * nprofs + idx - 1] + coeff * (prof_cij[5 * nprofs + idx] - prof_cij[5 * nprofs + idx - 1]);
68493642f1SJames Wright     *eps    = prof_eps[idx - 1] + coeff * (prof_eps[idx] - prof_eps[idx - 1]);
69493642f1SJames Wright     *lt     = prof_lt[idx - 1] + coeff * (prof_lt[idx] - prof_lt[idx - 1]);
70c77f3192SJames Wright   } else {  // y outside bounds of prof_wd
71493642f1SJames Wright     ubar[0] = prof_ubar[1 * nprofs - 1];
72493642f1SJames Wright     ubar[1] = prof_ubar[2 * nprofs - 1];
73493642f1SJames Wright     ubar[2] = prof_ubar[3 * nprofs - 1];
74493642f1SJames Wright     cij[0]  = prof_cij[1 * nprofs - 1];
75493642f1SJames Wright     cij[1]  = prof_cij[2 * nprofs - 1];
76493642f1SJames Wright     cij[2]  = prof_cij[3 * nprofs - 1];
77493642f1SJames Wright     cij[3]  = prof_cij[4 * nprofs - 1];
78493642f1SJames Wright     cij[4]  = prof_cij[5 * nprofs - 1];
79493642f1SJames Wright     cij[5]  = prof_cij[6 * nprofs - 1];
80493642f1SJames Wright     *eps    = prof_eps[nprofs - 1];
81493642f1SJames Wright     *lt     = prof_lt[nprofs - 1];
82493642f1SJames Wright   }
83493642f1SJames Wright }
84493642f1SJames Wright 
85493642f1SJames Wright /*
8671cd6200SJames Wright  * @brief Calculate spectrum coefficient, qn
8771cd6200SJames Wright  *
8871cd6200SJames Wright  * Calculates q_n at a given distance to the wall
8971cd6200SJames Wright  *
9071cd6200SJames Wright  * @param[in]  kappa     nth wavenumber
9171cd6200SJames Wright  * @param[in]  dkappa    Difference between wavenumbers
9271cd6200SJames Wright  * @param[in]  keta      Dissipation wavenumber
9371cd6200SJames Wright  * @param[in]  kcut      Mesh-induced cutoff wavenumber
9471cd6200SJames Wright  * @param[in]  ke        Energy-containing wavenumber
959ef62cddSJames Wright  * @param[in]  Ektot_inv Inverse of total turbulent kinetic energy of spectrum
9671cd6200SJames Wright  * @returns    qn        Spectrum coefficient
9771cd6200SJames Wright  */
982b916ea7SJeremy L Thompson CEED_QFUNCTION_HELPER CeedScalar Calc_qn(const CeedScalar kappa, const CeedScalar dkappa, const CeedScalar keta, const CeedScalar kcut,
9970b0cb14SJames Wright                                          const CeedScalar ke, const CeedScalar Ektot_inv) {
1002b916ea7SJeremy L Thompson   const CeedScalar feta_x_fcut = exp(-Square(12 * kappa / keta) - Cube(4 * Max(kappa - 0.9 * kcut, 0) / kcut));
1012b916ea7SJeremy L Thompson   return pow(kappa / ke, 4.) * pow(1 + 2.4 * Square(kappa / ke), -17. / 6) * feta_x_fcut * dkappa * Ektot_inv;
10271cd6200SJames Wright }
10371cd6200SJames Wright 
10471cd6200SJames Wright // Calculate hmax, ke, keta, and kcut
10584b557acSJames Wright CEED_QFUNCTION_HELPER void SpectrumConstants(const CeedScalar wall_dist, const CeedScalar eps, const CeedScalar lt, const CeedScalar hNodSep[3],
1062b916ea7SJeremy L Thompson                                              const CeedScalar nu, CeedScalar *hmax, CeedScalar *ke, CeedScalar *keta, CeedScalar *kcut) {
10784b557acSJames Wright   *hmax = Max(Max(hNodSep[0], hNodSep[1]), hNodSep[2]);
108c77f3192SJames Wright   *ke   = wall_dist == 0 ? 1e16 : 2 * M_PI / Min(2 * wall_dist, 3 * lt);
10971cd6200SJames Wright   *keta = 2 * M_PI * pow(Cube(nu) / eps, -0.25);
11084b557acSJames Wright   *kcut = M_PI / Min(Max(Max(hNodSep[1], hNodSep[2]), 0.3 * (*hmax)) + 0.1 * wall_dist, *hmax);
11171cd6200SJames Wright }
11271cd6200SJames Wright 
11371cd6200SJames Wright /*
114493642f1SJames Wright  * @brief Calculate spectrum coefficients for STG
115493642f1SJames Wright  *
116493642f1SJames Wright  * Calculates q_n at a given distance to the wall
117493642f1SJames Wright  *
118c77f3192SJames Wright  * @param[in]  wall_dist  Distance to the nearest wall
119c77f3192SJames Wright  * @param[in]  eps        Turbulent dissipation w/rt wall_dist
120c77f3192SJames Wright  * @param[in]  lt         Turbulent length scale w/rt wall_dist
12184b557acSJames Wright  * @param[in]  h_node_sep Element lengths in coordinate directions
122493642f1SJames Wright  * @param[in]  nu         Dynamic Viscosity;
123493642f1SJames Wright  * @param[in]  stg_ctx    STGShur14Context for the problem
124493642f1SJames Wright  * @param[out] qn         Spectrum coefficients, [nmodes]
125493642f1SJames Wright  */
12684b557acSJames Wright CEED_QFUNCTION_HELPER void CalcSpectrum(const CeedScalar wall_dist, const CeedScalar eps, const CeedScalar lt, const CeedScalar h_node_sep[3],
12742454adaSJames Wright                                         const CeedScalar nu, CeedScalar qn[], const StgShur14Context stg_ctx) {
128493642f1SJames Wright   const CeedInt     nmodes = stg_ctx->nmodes;
129493642f1SJames Wright   const CeedScalar *kappa  = &stg_ctx->data[stg_ctx->offsets.kappa];
13071cd6200SJames Wright   CeedScalar        hmax, ke, keta, kcut, Ektot = 0.0;
1312b916ea7SJeremy L Thompson 
13284b557acSJames Wright   SpectrumConstants(wall_dist, eps, lt, h_node_sep, nu, &hmax, &ke, &keta, &kcut);
133493642f1SJames Wright 
134493642f1SJames Wright   for (CeedInt n = 0; n < nmodes; n++) {
13571cd6200SJames Wright     const CeedScalar dkappa = n == 0 ? kappa[0] : kappa[n] - kappa[n - 1];
13671cd6200SJames Wright     qn[n]                   = Calc_qn(kappa[n], dkappa, keta, kcut, ke, 1.0);
137493642f1SJames Wright     Ektot += qn[n];
138493642f1SJames Wright   }
139493642f1SJames Wright 
1400a8dc919SJames Wright   if (Ektot == 0) return;
141493642f1SJames Wright   for (CeedInt n = 0; n < nmodes; n++) qn[n] /= Ektot;
142493642f1SJames Wright }
143493642f1SJames Wright 
144493642f1SJames Wright /******************************************************
145493642f1SJames Wright  * @brief Calculate u(x,t) for STG inflow condition
146493642f1SJames Wright  *
147493642f1SJames Wright  * @param[in]  X       Location to evaluate u(X,t)
148493642f1SJames Wright  * @param[in]  t       Time to evaluate u(X,t)
149493642f1SJames Wright  * @param[in]  ubar    Mean velocity at X
150493642f1SJames Wright  * @param[in]  cij     Cholesky decomposition at X
151493642f1SJames Wright  * @param[in]  qn      Wavemode amplitudes at X, [nmodes]
152493642f1SJames Wright  * @param[out] u       Velocity at X and t
153493642f1SJames Wright  * @param[in]  stg_ctx STGShur14Context for the problem
154493642f1SJames Wright  */
15542454adaSJames Wright CEED_QFUNCTION_HELPER void StgShur14Calc(const CeedScalar X[3], const CeedScalar t, const CeedScalar ubar[3], const CeedScalar cij[6],
15642454adaSJames Wright                                          const CeedScalar qn[], CeedScalar u[3], const StgShur14Context stg_ctx) {
157493642f1SJames Wright   const CeedInt     nmodes = stg_ctx->nmodes;
158493642f1SJames Wright   const CeedScalar *kappa  = &stg_ctx->data[stg_ctx->offsets.kappa];
159493642f1SJames Wright   const CeedScalar *phi    = &stg_ctx->data[stg_ctx->offsets.phi];
160493642f1SJames Wright   const CeedScalar *sigma  = &stg_ctx->data[stg_ctx->offsets.sigma];
161493642f1SJames Wright   const CeedScalar *d      = &stg_ctx->data[stg_ctx->offsets.d];
162493642f1SJames Wright   CeedScalar        xdotd, vp[3] = {0.};
163493642f1SJames Wright   CeedScalar        xhat[] = {0., X[1], X[2]};
164493642f1SJames Wright 
1652b916ea7SJeremy L Thompson   CeedPragmaSIMD for (CeedInt n = 0; n < nmodes; n++) {
166493642f1SJames Wright     xhat[0] = (X[0] - stg_ctx->u0 * t) * Max(2 * kappa[0] / kappa[n], 0.1);
167493642f1SJames Wright     xdotd   = 0.;
168493642f1SJames Wright     for (CeedInt i = 0; i < 3; i++) xdotd += d[i * nmodes + n] * xhat[i];
169493642f1SJames Wright     const CeedScalar cos_kxdp = cos(kappa[n] * xdotd + phi[n]);
1700a8dc919SJames Wright     vp[0] += sqrt(qn[n]) * sigma[0 * nmodes + n] * cos_kxdp;
1710a8dc919SJames Wright     vp[1] += sqrt(qn[n]) * sigma[1 * nmodes + n] * cos_kxdp;
1720a8dc919SJames Wright     vp[2] += sqrt(qn[n]) * sigma[2 * nmodes + n] * cos_kxdp;
173493642f1SJames Wright   }
1740a8dc919SJames Wright   for (CeedInt i = 0; i < 3; i++) vp[i] *= 2 * sqrt(1.5);
175493642f1SJames Wright 
176493642f1SJames Wright   u[0] = ubar[0] + cij[0] * vp[0];
177493642f1SJames Wright   u[1] = ubar[1] + cij[3] * vp[0] + cij[1] * vp[1];
178493642f1SJames Wright   u[2] = ubar[2] + cij[4] * vp[0] + cij[5] * vp[1] + cij[2] * vp[2];
179493642f1SJames Wright }
180493642f1SJames Wright 
1818eea80fcSJames Wright /******************************************************
1828eea80fcSJames Wright  * @brief Calculate u(x,t) for STG inflow condition
1838eea80fcSJames Wright  *
1848eea80fcSJames Wright  * @param[in]  X          Location to evaluate u(X,t)
1858eea80fcSJames Wright  * @param[in]  t          Time to evaluate u(X,t)
1868eea80fcSJames Wright  * @param[in]  ubar       Mean velocity at X
1878eea80fcSJames Wright  * @param[in]  cij        Cholesky decomposition at X
188c77f3192SJames Wright  * @param[in]  Ektot      Total spectrum energy at this location
18984b557acSJames Wright  * @param[in]  h_node_sep Element size in 3 directions
190c77f3192SJames Wright  * @param[in]  wall_dist  Distance to closest wall
191c77f3192SJames Wright  * @param[in]  eps        Turbulent dissipation
192c77f3192SJames Wright  * @param[in]  lt         Turbulent length scale
1938eea80fcSJames Wright  * @param[out] u          Velocity at X and t
1948eea80fcSJames Wright  * @param[in]  stg_ctx    STGShur14Context for the problem
1958eea80fcSJames Wright  */
19642454adaSJames Wright CEED_QFUNCTION_HELPER void StgShur14Calc_PrecompEktot(const CeedScalar X[3], const CeedScalar t, const CeedScalar ubar[3], const CeedScalar cij[6],
19784b557acSJames Wright                                                       const CeedScalar Ektot, const CeedScalar h_node_sep[3], const CeedScalar wall_dist,
19884b557acSJames Wright                                                       const CeedScalar eps, const CeedScalar lt, const CeedScalar nu, CeedScalar u[3],
19984b557acSJames Wright                                                       const StgShur14Context stg_ctx) {
2008eea80fcSJames Wright   const CeedInt     nmodes = stg_ctx->nmodes;
2018eea80fcSJames Wright   const CeedScalar *kappa  = &stg_ctx->data[stg_ctx->offsets.kappa];
2028eea80fcSJames Wright   const CeedScalar *phi    = &stg_ctx->data[stg_ctx->offsets.phi];
2038eea80fcSJames Wright   const CeedScalar *sigma  = &stg_ctx->data[stg_ctx->offsets.sigma];
2048eea80fcSJames Wright   const CeedScalar *d      = &stg_ctx->data[stg_ctx->offsets.d];
2058eea80fcSJames Wright   CeedScalar        hmax, ke, keta, kcut;
20684b557acSJames Wright   SpectrumConstants(wall_dist, eps, lt, h_node_sep, nu, &hmax, &ke, &keta, &kcut);
2078eea80fcSJames Wright   CeedScalar xdotd, vp[3] = {0.};
2088eea80fcSJames Wright   CeedScalar xhat[] = {0., X[1], X[2]};
2098eea80fcSJames Wright 
2102b916ea7SJeremy L Thompson   CeedPragmaSIMD for (CeedInt n = 0; n < nmodes; n++) {
2118eea80fcSJames Wright     xhat[0] = (X[0] - stg_ctx->u0 * t) * Max(2 * kappa[0] / kappa[n], 0.1);
2128eea80fcSJames Wright     xdotd   = 0.;
2138eea80fcSJames Wright     for (CeedInt i = 0; i < 3; i++) xdotd += d[i * nmodes + n] * xhat[i];
2148eea80fcSJames Wright     const CeedScalar cos_kxdp = cos(kappa[n] * xdotd + phi[n]);
2158eea80fcSJames Wright     const CeedScalar dkappa   = n == 0 ? kappa[0] : kappa[n] - kappa[n - 1];
2168eea80fcSJames Wright     const CeedScalar qn       = Calc_qn(kappa[n], dkappa, keta, kcut, ke, Ektot);
2178eea80fcSJames Wright     vp[0] += sqrt(qn) * sigma[0 * nmodes + n] * cos_kxdp;
2188eea80fcSJames Wright     vp[1] += sqrt(qn) * sigma[1 * nmodes + n] * cos_kxdp;
2198eea80fcSJames Wright     vp[2] += sqrt(qn) * sigma[2 * nmodes + n] * cos_kxdp;
2208eea80fcSJames Wright   }
2218eea80fcSJames Wright   for (CeedInt i = 0; i < 3; i++) vp[i] *= 2 * sqrt(1.5);
2228eea80fcSJames Wright 
2238eea80fcSJames Wright   u[0] = ubar[0] + cij[0] * vp[0];
2248eea80fcSJames Wright   u[1] = ubar[1] + cij[3] * vp[0] + cij[1] * vp[1];
2258eea80fcSJames Wright   u[2] = ubar[2] + cij[4] * vp[0] + cij[5] * vp[1] + cij[2] * vp[2];
2268eea80fcSJames Wright }
2278eea80fcSJames Wright 
22870b0cb14SJames Wright // Create preprocessed input for the stg calculation
22970b0cb14SJames Wright //
23070b0cb14SJames Wright // stg_data[0] = 1 / Ektot (inverse of total spectrum energy)
23142454adaSJames Wright CEED_QFUNCTION(StgShur14Preprocess)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
232*21ba7ba4SJames Wright   const CeedScalar *dXdx_q         = in[0];
2333d65b166SJames Wright   const CeedScalar(*x)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1];
2348eea80fcSJames Wright 
2358eea80fcSJames Wright   CeedScalar(*stg_data) = (CeedScalar(*))out[0];
2368eea80fcSJames Wright 
2378eea80fcSJames Wright   CeedScalar             ubar[3], cij[6], eps, lt;
23842454adaSJames Wright   const StgShur14Context stg_ctx = (StgShur14Context)ctx;
2398eea80fcSJames Wright   const CeedScalar       mu      = stg_ctx->newtonian_ctx.mu;
2408eea80fcSJames Wright   const CeedScalar       theta0  = stg_ctx->theta0;
2418eea80fcSJames Wright   const CeedScalar       P0      = stg_ctx->P0;
2423d65b166SJames Wright   const CeedScalar       Rd      = GasConstant(&stg_ctx->newtonian_ctx);
2438eea80fcSJames Wright   const CeedScalar       rho     = P0 / (Rd * theta0);
2448eea80fcSJames Wright   const CeedScalar       nu      = mu / rho;
2458eea80fcSJames Wright 
2468eea80fcSJames Wright   const CeedInt     nmodes = stg_ctx->nmodes;
2478eea80fcSJames Wright   const CeedScalar *kappa  = &stg_ctx->data[stg_ctx->offsets.kappa];
2489eeef72bSJames Wright   CeedScalar        hmax, ke, keta, kcut;
2498eea80fcSJames Wright 
2502b916ea7SJeremy L Thompson   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
251c77f3192SJames Wright     const CeedScalar wall_dist = x[1][i];
252*21ba7ba4SJames Wright     CeedScalar       dXdx[3][3];
253*21ba7ba4SJames Wright     StoredValuesUnpack(Q, i, 0, 9, dXdx_q, (CeedScalar *)dXdx);
2548eea80fcSJames Wright 
25584b557acSJames Wright     CeedScalar h_node_sep[3];
256*21ba7ba4SJames Wright     for (CeedInt j = 0; j < 3; j++) h_node_sep[j] = 2 / sqrt(Square(dXdx[0][j]) + Square(dXdx[1][j]) + Square(dXdx[2][j]));
25784b557acSJames Wright     ScaleN(h_node_sep, stg_ctx->h_scale_factor, 3);
2588eea80fcSJames Wright 
259c77f3192SJames Wright     InterpolateProfile(wall_dist, ubar, cij, &eps, &lt, stg_ctx);
26084b557acSJames Wright     SpectrumConstants(wall_dist, eps, lt, h_node_sep, nu, &hmax, &ke, &keta, &kcut);
2618eea80fcSJames Wright 
2628eea80fcSJames Wright     // Calculate total TKE per spectrum
2632f638ed2SJames Wright     CeedScalar Ek_tot = 0;
2642b916ea7SJeremy L Thompson     CeedPragmaSIMD for (CeedInt n = 0; n < nmodes; n++) {
2658eea80fcSJames Wright       const CeedScalar dkappa = n == 0 ? kappa[0] : kappa[n] - kappa[n - 1];
2662f638ed2SJames Wright       Ek_tot += Calc_qn(kappa[n], dkappa, keta, kcut, ke, 1.0);
2678eea80fcSJames Wright     }
2682f638ed2SJames Wright     // avoid underflowed and poorly defined spectrum coefficients
2692f638ed2SJames Wright     stg_data[i] = Ek_tot != 0 ? 1 / Ek_tot : 0;
2708eea80fcSJames Wright   }
2718eea80fcSJames Wright   return 0;
2728eea80fcSJames Wright }
2738eea80fcSJames Wright 
27443bff553SJames Wright // Extrude the STGInflow profile through out the domain for an initial condition
27542454adaSJames Wright CEED_QFUNCTION(ICsStg)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
2763d65b166SJames Wright   const CeedScalar(*x)[CEED_Q_VLA]    = (const CeedScalar(*)[CEED_Q_VLA])in[0];
2774f0244d1SJeremy L Thompson   const CeedScalar(*J)[3][CEED_Q_VLA] = (const CeedScalar(*)[3][CEED_Q_VLA])in[1];
27843bff553SJames Wright   CeedScalar(*q0)[CEED_Q_VLA]         = (CeedScalar(*)[CEED_Q_VLA])out[0];
27943bff553SJames Wright 
28042454adaSJames Wright   const StgShur14Context         stg_ctx = (StgShur14Context)ctx;
2819b103f75SJames Wright   const NewtonianIdealGasContext gas     = &stg_ctx->newtonian_ctx;
282d4e0f297SJames Wright   CeedScalar                     qn[STG_NMODES_MAX], u[3], ubar[3], cij[6], eps, lt;
283d4e0f297SJames Wright   const CeedScalar               dx     = stg_ctx->dx;
284d4e0f297SJames Wright   const CeedScalar               time   = stg_ctx->time;
28543bff553SJames Wright   const CeedScalar               theta0 = stg_ctx->theta0;
28643bff553SJames Wright   const CeedScalar               P0     = stg_ctx->P0;
2879b103f75SJames Wright   const CeedScalar               rho    = P0 / (GasConstant(gas) * theta0);
2889b103f75SJames Wright   const CeedScalar               nu     = gas->mu / rho;
28943bff553SJames Wright 
2902b916ea7SJeremy L Thompson   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
291d4e0f297SJames Wright     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
2924f0244d1SJeremy L Thompson     CeedScalar       dXdx[3][3];
2931a74fa30SJames Wright     InvertMappingJacobian_3D(Q, i, J, dXdx, NULL);
29484b557acSJames Wright     CeedScalar h_node_sep[3];
29584b557acSJames Wright     h_node_sep[0] = dx;
29684b557acSJames Wright     for (CeedInt j = 1; j < 3; j++) h_node_sep[j] = 2 / sqrt(Square(dXdx[0][j]) + Square(dXdx[1][j]) + Square(dXdx[2][j]));
29784b557acSJames Wright     ScaleN(h_node_sep, stg_ctx->h_scale_factor, 3);
298d4e0f297SJames Wright 
299d4e0f297SJames Wright     InterpolateProfile(x_i[1], ubar, cij, &eps, &lt, stg_ctx);
300d4e0f297SJames Wright     if (stg_ctx->use_fluctuating_IC) {
30184b557acSJames Wright       CalcSpectrum(x_i[1], eps, lt, h_node_sep, nu, qn, stg_ctx);
30242454adaSJames Wright       StgShur14Calc(x_i, time, ubar, cij, qn, u, stg_ctx);
303d4e0f297SJames Wright     } else {
304d4e0f297SJames Wright       for (CeedInt j = 0; j < 3; j++) u[j] = ubar[j];
305d4e0f297SJames Wright     }
30643bff553SJames Wright 
3079b103f75SJames Wright     CeedScalar Y[5] = {P0, u[0], u[1], u[2], theta0}, q[5];
3089b103f75SJames Wright     State      s    = StateFromY(gas, Y);
3099b103f75SJames Wright     StateToQ(gas, s, q, gas->state_var);
3109b103f75SJames Wright     for (CeedInt j = 0; j < 5; j++) {
3119b103f75SJames Wright       q0[j][i] = q[j];
31288243482SJames Wright     }
313b193fadcSJames Wright   }
31443bff553SJames Wright   return 0;
31543bff553SJames Wright }
31643bff553SJames Wright 
317493642f1SJames Wright /********************************************************************
318493642f1SJames Wright  * @brief QFunction to calculate the inflow boundary condition
319493642f1SJames Wright  *
320493642f1SJames Wright  * This will loop through quadrature points, calculate the wavemode amplitudes
321493642f1SJames Wright  * at each location, then calculate the actual velocity.
322493642f1SJames Wright  */
32342454adaSJames Wright CEED_QFUNCTION(StgShur14Inflow)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
3243d65b166SJames Wright   const CeedScalar(*q)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0];
325ade49511SJames Wright   const CeedScalar(*q_data_sur)    = in[2];
3263d65b166SJames Wright   const CeedScalar(*X)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[3];
327493642f1SJames Wright 
3283d65b166SJames Wright   CeedScalar(*v)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0];
329ade49511SJames Wright   CeedScalar(*jac_data_sur)  = out[1];
330493642f1SJames Wright 
33142454adaSJames Wright   const StgShur14Context stg_ctx = (StgShur14Context)ctx;
332493642f1SJames Wright   CeedScalar             qn[STG_NMODES_MAX], u[3], ubar[3], cij[6], eps, lt;
333493642f1SJames Wright   const bool             is_implicit = stg_ctx->is_implicit;
334493642f1SJames Wright   const bool             mean_only   = stg_ctx->mean_only;
335493642f1SJames Wright   const bool             prescribe_T = stg_ctx->prescribe_T;
336493642f1SJames Wright   const CeedScalar       dx          = stg_ctx->dx;
337493642f1SJames Wright   const CeedScalar       mu          = stg_ctx->newtonian_ctx.mu;
338493642f1SJames Wright   const CeedScalar       time        = stg_ctx->time;
339493642f1SJames Wright   const CeedScalar       theta0      = stg_ctx->theta0;
340493642f1SJames Wright   const CeedScalar       P0          = stg_ctx->P0;
341493642f1SJames Wright   const CeedScalar       cv          = stg_ctx->newtonian_ctx.cv;
3423d65b166SJames Wright   const CeedScalar       Rd          = GasConstant(&stg_ctx->newtonian_ctx);
3433d65b166SJames Wright   const CeedScalar       gamma       = HeatCapacityRatio(&stg_ctx->newtonian_ctx);
344493642f1SJames Wright 
3452b916ea7SJeremy L Thompson   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
346493642f1SJames Wright     const CeedScalar rho = prescribe_T ? q[0][i] : P0 / (Rd * theta0);
347493642f1SJames Wright     const CeedScalar x[] = {X[0][i], X[1][i], X[2][i]};
348ade49511SJames Wright     CeedScalar       wdetJb, dXdx[2][3], norm[3];
349ade49511SJames Wright     QdataBoundaryUnpack_3D(Q, i, q_data_sur, &wdetJb, dXdx, norm);
350ade49511SJames Wright     wdetJb *= is_implicit ? -1. : 1.;
351493642f1SJames Wright 
35284b557acSJames Wright     CeedScalar h_node_sep[3];
35384b557acSJames Wright     h_node_sep[0] = dx;
35484b557acSJames Wright     for (CeedInt j = 1; j < 3; j++) h_node_sep[j] = 2 / sqrt(Square(dXdx[0][j]) + Square(dXdx[1][j]));
35584b557acSJames Wright     ScaleN(h_node_sep, stg_ctx->h_scale_factor, 3);
356493642f1SJames Wright 
357493642f1SJames Wright     InterpolateProfile(X[1][i], ubar, cij, &eps, &lt, stg_ctx);
358493642f1SJames Wright     if (!mean_only) {
35984b557acSJames Wright       CalcSpectrum(X[1][i], eps, lt, h_node_sep, mu / rho, qn, stg_ctx);
36042454adaSJames Wright       StgShur14Calc(x, time, ubar, cij, qn, u, stg_ctx);
361493642f1SJames Wright     } else {
362493642f1SJames Wright       for (CeedInt j = 0; j < 3; j++) u[j] = ubar[j];
363493642f1SJames Wright     }
364493642f1SJames Wright 
365a6e8f989SJames Wright     const CeedScalar E_kinetic = .5 * rho * Dot3(u, u);
366493642f1SJames Wright     CeedScalar       E_internal, P;
367493642f1SJames Wright     if (prescribe_T) {
368493642f1SJames Wright       // Temperature is being set weakly (theta0) and for constant cv this sets E_internal
369493642f1SJames Wright       E_internal = rho * cv * theta0;
370493642f1SJames Wright       // Find pressure using
371493642f1SJames Wright       P = rho * Rd * theta0;  // interior rho with exterior T
372493642f1SJames Wright     } else {
373493642f1SJames Wright       E_internal = q[4][i] - E_kinetic;  // uses prescribed rho and u, E from solution
374493642f1SJames Wright       P          = E_internal * (gamma - 1.);
375493642f1SJames Wright     }
376493642f1SJames Wright 
377493642f1SJames Wright     const CeedScalar E = E_internal + E_kinetic;
378493642f1SJames Wright 
379493642f1SJames Wright     // Velocity normal to the boundary
380a6e8f989SJames Wright     const CeedScalar u_normal = Dot3(norm, u);
381a6e8f989SJames Wright 
382493642f1SJames Wright     // The Physics
383493642f1SJames Wright     // Zero v so all future terms can safely sum into it
384493642f1SJames Wright     for (CeedInt j = 0; j < 5; j++) v[j][i] = 0.;
385493642f1SJames Wright 
386493642f1SJames Wright     // The Physics
387493642f1SJames Wright     // -- Density
388493642f1SJames Wright     v[0][i] -= wdetJb * rho * u_normal;
389493642f1SJames Wright 
390493642f1SJames Wright     // -- Momentum
3912b916ea7SJeremy L Thompson     for (CeedInt j = 0; j < 3; j++) v[j + 1][i] -= wdetJb * (rho * u_normal * u[j] + norm[j] * P);
392493642f1SJames Wright 
393493642f1SJames Wright     // -- Total Energy Density
394493642f1SJames Wright     v[4][i] -= wdetJb * u_normal * (E + P);
395a6e8f989SJames Wright 
396ade49511SJames Wright     const CeedScalar U[] = {rho, u[0], u[1], u[2], E}, kmstress[6] = {0.};
397ade49511SJames Wright     StoredValuesPack(Q, i, 0, 5, U, jac_data_sur);
398ade49511SJames Wright     StoredValuesPack(Q, i, 5, 6, kmstress, jac_data_sur);
399493642f1SJames Wright   }
400493642f1SJames Wright   return 0;
401493642f1SJames Wright }
402493642f1SJames Wright 
40342454adaSJames Wright CEED_QFUNCTION(StgShur14Inflow_Jacobian)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
4043d65b166SJames Wright   const CeedScalar(*dq)[CEED_Q_VLA]           = (const CeedScalar(*)[CEED_Q_VLA])in[0];
4053d65b166SJames Wright   const CeedScalar(*q_data_sur)[CEED_Q_VLA]   = (const CeedScalar(*)[CEED_Q_VLA])in[2];
4063d65b166SJames Wright   const CeedScalar(*jac_data_sur)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[4];
407a6e8f989SJames Wright   CeedScalar(*v)[CEED_Q_VLA]                  = (CeedScalar(*)[CEED_Q_VLA])out[0];
4083d65b166SJames Wright 
40942454adaSJames Wright   const StgShur14Context stg_ctx  = (StgShur14Context)ctx;
410a6e8f989SJames Wright   const bool             implicit = stg_ctx->is_implicit;
411a6e8f989SJames Wright   const CeedScalar       cv       = stg_ctx->newtonian_ctx.cv;
4123d65b166SJames Wright   const CeedScalar       Rd       = GasConstant(&stg_ctx->newtonian_ctx);
4133d65b166SJames Wright   const CeedScalar       gamma    = HeatCapacityRatio(&stg_ctx->newtonian_ctx);
414a6e8f989SJames Wright 
415a6e8f989SJames Wright   const CeedScalar theta0      = stg_ctx->theta0;
416a6e8f989SJames Wright   const bool       prescribe_T = stg_ctx->prescribe_T;
417a6e8f989SJames Wright 
418b193fadcSJames Wright   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
419a6e8f989SJames Wright     // Setup
420a6e8f989SJames Wright     // -- Interp-to-Interp q_data
421a6e8f989SJames Wright     // For explicit mode, the surface integral is on the RHS of ODE q_dot = f(q).
422a6e8f989SJames Wright     // For implicit mode, it gets pulled to the LHS of implicit ODE/DAE g(q_dot, q).
423a6e8f989SJames Wright     // We can effect this by swapping the sign on this weight
424a6e8f989SJames Wright     const CeedScalar wdetJb = (implicit ? -1. : 1.) * q_data_sur[0][i];
425a6e8f989SJames Wright 
426a6e8f989SJames Wright     // Calculate inflow values
427a6e8f989SJames Wright     CeedScalar velocity[3];
428a6e8f989SJames Wright     for (CeedInt j = 0; j < 3; j++) velocity[j] = jac_data_sur[5 + j][i];
429ade49511SJames Wright     // TODO This is almost certainly a bug. Velocity isn't stored here, only 0s.
430a6e8f989SJames Wright 
431a6e8f989SJames Wright     // enabling user to choose between weak T and weak rho inflow
432a6e8f989SJames Wright     CeedScalar drho, dE, dP;
433a6e8f989SJames Wright     if (prescribe_T) {
434a6e8f989SJames Wright       // rho should be from the current solution
435a6e8f989SJames Wright       drho                   = dq[0][i];
436a6e8f989SJames Wright       CeedScalar dE_internal = drho * cv * theta0;
437a6e8f989SJames Wright       CeedScalar dE_kinetic  = .5 * drho * Dot3(velocity, velocity);
438a6e8f989SJames Wright       dE                     = dE_internal + dE_kinetic;
439a6e8f989SJames Wright       dP                     = drho * Rd * theta0;  // interior rho with exterior T
440a6e8f989SJames Wright     } else {                                        // rho specified, E_internal from solution
441a6e8f989SJames Wright       drho = 0;
442a6e8f989SJames Wright       dE   = dq[4][i];
443a6e8f989SJames Wright       dP   = dE * (gamma - 1.);
444a6e8f989SJames Wright     }
4452b916ea7SJeremy L Thompson     const CeedScalar norm[3] = {q_data_sur[1][i], q_data_sur[2][i], q_data_sur[3][i]};
446a6e8f989SJames Wright 
447a6e8f989SJames Wright     const CeedScalar u_normal = Dot3(norm, velocity);
448a6e8f989SJames Wright 
449a6e8f989SJames Wright     v[0][i] = -wdetJb * drho * u_normal;
4502b916ea7SJeremy L Thompson     for (int j = 0; j < 3; j++) v[j + 1][i] = -wdetJb * (drho * u_normal * velocity[j] + norm[j] * dP);
451a6e8f989SJames Wright     v[4][i] = -wdetJb * u_normal * (dE + dP);
452b193fadcSJames Wright   }
453a6e8f989SJames Wright   return 0;
454a6e8f989SJames Wright }
455a6e8f989SJames Wright 
456b7190ff7SJames Wright /********************************************************************
457b7190ff7SJames Wright  * @brief QFunction to calculate the strongly enforce inflow BC
458b7190ff7SJames Wright  *
459b7190ff7SJames Wright  * This QF is for the strong application of STG via libCEED (rather than
460b7190ff7SJames Wright  * through the native PETSc `DMAddBoundary` -> `bcFunc` method.
461b7190ff7SJames Wright  */
46242454adaSJames Wright CEED_QFUNCTION(StgShur14InflowStrongQF)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
463*21ba7ba4SJames Wright   const CeedScalar *dXdx_q              = in[0];
4643d65b166SJames Wright   const CeedScalar(*coords)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1];
4653d65b166SJames Wright   const CeedScalar(*scale)              = (const CeedScalar(*))in[2];
4669ef62cddSJames Wright   const CeedScalar(*inv_Ektotal)        = (const CeedScalar(*))in[3];
467b7190ff7SJames Wright   CeedScalar(*bcval)[CEED_Q_VLA]        = (CeedScalar(*)[CEED_Q_VLA])out[0];
468b7190ff7SJames Wright 
46942454adaSJames Wright   const StgShur14Context         stg_ctx = (StgShur14Context)ctx;
4709b103f75SJames Wright   const NewtonianIdealGasContext gas     = &stg_ctx->newtonian_ctx;
47170b0cb14SJames Wright   CeedScalar                     u[3], ubar[3], cij[6], eps, lt;
472b7190ff7SJames Wright   const bool                     mean_only = stg_ctx->mean_only;
473b7190ff7SJames Wright   const CeedScalar               time      = stg_ctx->time;
474b7190ff7SJames Wright   const CeedScalar               theta0    = stg_ctx->theta0;
475b7190ff7SJames Wright   const CeedScalar               P0        = stg_ctx->P0;
4769b103f75SJames Wright   const CeedScalar               rho       = P0 / (GasConstant(gas) * theta0);
4779b103f75SJames Wright   const CeedScalar               nu        = gas->mu / rho;
478b7190ff7SJames Wright 
4792b916ea7SJeremy L Thompson   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
480b7190ff7SJames Wright     const CeedScalar x[] = {coords[0][i], coords[1][i], coords[2][i]};
481*21ba7ba4SJames Wright     CeedScalar       dXdx[3][3];
482*21ba7ba4SJames Wright     StoredValuesUnpack(Q, i, 0, 9, dXdx_q, (CeedScalar *)dXdx);
483b7190ff7SJames Wright 
48484b557acSJames Wright     CeedScalar h_node_sep[3];
485*21ba7ba4SJames Wright     for (CeedInt j = 0; j < 3; j++) h_node_sep[j] = 2 / sqrt(Square(dXdx[0][j]) + Square(dXdx[1][j]) + Square(dXdx[2][j]));
48684b557acSJames Wright     ScaleN(h_node_sep, stg_ctx->h_scale_factor, 3);
487b7190ff7SJames Wright 
488b7190ff7SJames Wright     InterpolateProfile(coords[1][i], ubar, cij, &eps, &lt, stg_ctx);
489b7190ff7SJames Wright     if (!mean_only) {
49070b0cb14SJames Wright       if (1) {
49184b557acSJames Wright         StgShur14Calc_PrecompEktot(x, time, ubar, cij, inv_Ektotal[i], h_node_sep, x[1], eps, lt, nu, u, stg_ctx);
49270b0cb14SJames Wright       } else {  // Original way
49370b0cb14SJames Wright         CeedScalar qn[STG_NMODES_MAX];
49484b557acSJames Wright         CalcSpectrum(coords[1][i], eps, lt, h_node_sep, nu, qn, stg_ctx);
49542454adaSJames Wright         StgShur14Calc(x, time, ubar, cij, qn, u, stg_ctx);
49670b0cb14SJames Wright       }
497b7190ff7SJames Wright     } else {
498b7190ff7SJames Wright       for (CeedInt j = 0; j < 3; j++) u[j] = ubar[j];
499b7190ff7SJames Wright     }
500b7190ff7SJames Wright 
5019b103f75SJames Wright     CeedScalar Y[5] = {P0, u[0], u[1], u[2], theta0}, q[5];
5029b103f75SJames Wright     State      s    = StateFromY(gas, Y);
5039b103f75SJames Wright     StateToQ(gas, s, q, gas->state_var);
5049b103f75SJames Wright     switch (gas->state_var) {
5053636f6a4SJames Wright       case STATEVAR_CONSERVATIVE:
5069b103f75SJames Wright         q[4] = 0.;  // Don't set energy
5073636f6a4SJames Wright         break;
5083636f6a4SJames Wright       case STATEVAR_PRIMITIVE:
5099b103f75SJames Wright         q[0] = 0;  // Don't set pressure
5103636f6a4SJames Wright         break;
5119b103f75SJames Wright       case STATEVAR_ENTROPY:
5129b103f75SJames Wright         q[0] = 0;  // Don't set V_density
5139b103f75SJames Wright         break;
5149b103f75SJames Wright     }
5159b103f75SJames Wright     for (CeedInt j = 0; j < 5; j++) {
5169b103f75SJames Wright       bcval[j][i] = scale[i] * q[j];
517b7190ff7SJames Wright     }
51888243482SJames Wright   }
519b7190ff7SJames Wright   return 0;
520b7190ff7SJames Wright }
521