1727da7e7SJeremy L Thompson // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 2727da7e7SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 3a515125bSLeila Ghaffari // 4727da7e7SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause 5a515125bSLeila Ghaffari // 6727da7e7SJeremy L Thompson // This file is part of CEED: http://github.com/ceed 7a515125bSLeila Ghaffari 8a515125bSLeila Ghaffari /// @file 9a515125bSLeila Ghaffari /// Setup libCEED for Navier-Stokes example using PETSc 10a515125bSLeila Ghaffari 11a515125bSLeila Ghaffari #include "../navierstokes.h" 12a515125bSLeila Ghaffari 13a515125bSLeila Ghaffari // Utility function - essential BC dofs are encoded in closure indices as -(i+1). 14a515125bSLeila Ghaffari PetscInt Involute(PetscInt i) { 15a515125bSLeila Ghaffari return i >= 0 ? i : -(i+1); 16a515125bSLeila Ghaffari } 17a515125bSLeila Ghaffari 18a515125bSLeila Ghaffari // Utility function to create local CEED restriction 196b1ccf21SJeremy L Thompson PetscErrorCode CreateRestrictionFromPlex(Ceed ceed, DM dm, CeedInt height, 206b1ccf21SJeremy L Thompson DMLabel domain_label, CeedInt value, CeedElemRestriction *elem_restr) { 216b1ccf21SJeremy L Thompson PetscInt num_elem, elem_size, num_dof, num_comp, *elem_restr_offsets; 22a515125bSLeila Ghaffari PetscErrorCode ierr; 236b1ccf21SJeremy L Thompson 24a515125bSLeila Ghaffari PetscFunctionBeginUser; 256b1ccf21SJeremy L Thompson ierr = DMPlexGetLocalOffsets(dm, domain_label, value, height, 0, &num_elem, 266b1ccf21SJeremy L Thompson &elem_size, &num_comp, &num_dof, &elem_restr_offsets); 276b1ccf21SJeremy L Thompson CHKERRQ(ierr); 28a515125bSLeila Ghaffari 296b1ccf21SJeremy L Thompson CeedElemRestrictionCreate(ceed, num_elem, elem_size, num_comp, 306b1ccf21SJeremy L Thompson 1, num_dof, CEED_MEM_HOST, CEED_COPY_VALUES, 316b1ccf21SJeremy L Thompson elem_restr_offsets, elem_restr); 326b1ccf21SJeremy L Thompson ierr = PetscFree(elem_restr_offsets); CHKERRQ(ierr); 33a515125bSLeila Ghaffari 34a515125bSLeila Ghaffari PetscFunctionReturn(0); 35a515125bSLeila Ghaffari } 36a515125bSLeila Ghaffari 37a515125bSLeila Ghaffari // Utility function to get Ceed Restriction for each domain 38a515125bSLeila Ghaffari PetscErrorCode GetRestrictionForDomain(Ceed ceed, DM dm, CeedInt height, 39a515125bSLeila Ghaffari DMLabel domain_label, PetscInt value, 406b1ccf21SJeremy L Thompson CeedInt Q, CeedInt q_data_size, 41a515125bSLeila Ghaffari CeedElemRestriction *elem_restr_q, 42a515125bSLeila Ghaffari CeedElemRestriction *elem_restr_x, 43a515125bSLeila Ghaffari CeedElemRestriction *elem_restr_qd_i) { 44a515125bSLeila Ghaffari DM dm_coord; 45a515125bSLeila Ghaffari CeedInt dim, loc_num_elem; 46a515125bSLeila Ghaffari CeedInt Q_dim; 47395c96d3SJed Brown CeedElemRestriction elem_restr_tmp; 48a515125bSLeila Ghaffari PetscErrorCode ierr; 49a515125bSLeila Ghaffari PetscFunctionBeginUser; 50a515125bSLeila Ghaffari 51a515125bSLeila Ghaffari ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr); 52a515125bSLeila Ghaffari dim -= height; 53a515125bSLeila Ghaffari Q_dim = CeedIntPow(Q, dim); 54395c96d3SJed Brown ierr = CreateRestrictionFromPlex(ceed, dm, height, domain_label, value, 55395c96d3SJed Brown &elem_restr_tmp); 56395c96d3SJed Brown CHKERRQ(ierr); 57395c96d3SJed Brown if (elem_restr_q) *elem_restr_q = elem_restr_tmp; 58395c96d3SJed Brown if (elem_restr_x) { 59a515125bSLeila Ghaffari ierr = DMGetCoordinateDM(dm, &dm_coord); CHKERRQ(ierr); 60a515125bSLeila Ghaffari ierr = DMPlexSetClosurePermutationTensor(dm_coord, PETSC_DETERMINE, NULL); 61a515125bSLeila Ghaffari CHKERRQ(ierr); 626b1ccf21SJeremy L Thompson ierr = CreateRestrictionFromPlex(ceed, dm_coord, height, domain_label, value, 636b1ccf21SJeremy L Thompson elem_restr_x); 646b1ccf21SJeremy L Thompson CHKERRQ(ierr); 65395c96d3SJed Brown } 66395c96d3SJed Brown if (elem_restr_qd_i) { 67395c96d3SJed Brown CeedElemRestrictionGetNumElements(elem_restr_tmp, &loc_num_elem); 68a515125bSLeila Ghaffari CeedElemRestrictionCreateStrided(ceed, loc_num_elem, Q_dim, 69a515125bSLeila Ghaffari q_data_size, q_data_size*loc_num_elem*Q_dim, 70a515125bSLeila Ghaffari CEED_STRIDES_BACKEND, elem_restr_qd_i); 71395c96d3SJed Brown } 72395c96d3SJed Brown if (!elem_restr_q) CeedElemRestrictionDestroy(&elem_restr_tmp); 73a515125bSLeila Ghaffari PetscFunctionReturn(0); 74a515125bSLeila Ghaffari } 75a515125bSLeila Ghaffari 76a515125bSLeila Ghaffari // Utility function to create CEED Composite Operator for the entire domain 77a515125bSLeila Ghaffari PetscErrorCode CreateOperatorForDomain(Ceed ceed, DM dm, SimpleBC bc, 78a515125bSLeila Ghaffari CeedData ceed_data, Physics phys, 79f0b65372SJed Brown CeedOperator op_apply_vol, 80f0b65372SJed Brown CeedOperator op_apply_ijacobian_vol, 81f0b65372SJed Brown CeedInt height, 82f0b65372SJed Brown CeedInt P_sur, CeedInt Q_sur, 83f0b65372SJed Brown CeedInt q_data_size_sur, CeedInt jac_data_size_sur, 84f0b65372SJed Brown CeedOperator *op_apply, CeedOperator *op_apply_ijacobian) { 85a515125bSLeila Ghaffari DMLabel domain_label; 86a515125bSLeila Ghaffari PetscErrorCode ierr; 87a515125bSLeila Ghaffari PetscFunctionBeginUser; 88a515125bSLeila Ghaffari 89a515125bSLeila Ghaffari // Create Composite Operaters 90a515125bSLeila Ghaffari CeedCompositeOperatorCreate(ceed, op_apply); 91f0b65372SJed Brown if (op_apply_ijacobian) 92f0b65372SJed Brown CeedCompositeOperatorCreate(ceed, op_apply_ijacobian); 93a515125bSLeila Ghaffari 94a515125bSLeila Ghaffari // --Apply Sub-Operator for the volume 95a515125bSLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_vol); 96f0b65372SJed Brown if (op_apply_ijacobian) 97f0b65372SJed Brown CeedCompositeOperatorAddSub(*op_apply_ijacobian, op_apply_ijacobian_vol); 98a515125bSLeila Ghaffari 99a515125bSLeila Ghaffari // -- Create Sub-Operator for in/outflow BCs 100bb8a0c61SJames Wright if (phys->has_neumann || 1) { 101a515125bSLeila Ghaffari // --- Setup 102a515125bSLeila Ghaffari ierr = DMGetLabel(dm, "Face Sets", &domain_label); CHKERRQ(ierr); 103a515125bSLeila Ghaffari 104a515125bSLeila Ghaffari // --- Get number of quadrature points for the boundaries 105a515125bSLeila Ghaffari CeedInt num_qpts_sur; 106a515125bSLeila Ghaffari CeedBasisGetNumQuadraturePoints(ceed_data->basis_q_sur, &num_qpts_sur); 107a515125bSLeila Ghaffari 108002797a3SLeila Ghaffari // --- Create Sub-Operator for inflow boundaries 109002797a3SLeila Ghaffari for (CeedInt i=0; i < bc->num_inflow; i++) { 11068ae065aSJames Wright CeedVector q_data_sur, jac_data_sur; 111f0b65372SJed Brown CeedOperator op_setup_sur, op_apply_inflow, 112f0b65372SJed Brown op_apply_inflow_jacobian = NULL; 11368ae065aSJames Wright CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur, 11468ae065aSJames Wright elem_restr_jd_i_sur; 115a515125bSLeila Ghaffari 116a515125bSLeila Ghaffari // ---- CEED Restriction 117002797a3SLeila Ghaffari ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->inflows[i], 118002797a3SLeila Ghaffari Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur, 119002797a3SLeila Ghaffari &elem_restr_qd_i_sur); 120a515125bSLeila Ghaffari CHKERRQ(ierr); 12168ae065aSJames Wright if (jac_data_size_sur > 0) { 12268ae065aSJames Wright // State-dependent data will be passed from residual to Jacobian. This will be collocated. 12368ae065aSJames Wright ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->inflows[i], 12468ae065aSJames Wright Q_sur, jac_data_size_sur, NULL, NULL, 12568ae065aSJames Wright &elem_restr_jd_i_sur); 12668ae065aSJames Wright CHKERRQ(ierr); 12768ae065aSJames Wright CeedElemRestrictionCreateVector(elem_restr_jd_i_sur, &jac_data_sur, NULL); 12868ae065aSJames Wright } else { 12968ae065aSJames Wright elem_restr_jd_i_sur = NULL; 13068ae065aSJames Wright jac_data_sur = NULL; 13168ae065aSJames Wright } 132a515125bSLeila Ghaffari 133a515125bSLeila Ghaffari // ---- CEED Vector 134a515125bSLeila Ghaffari PetscInt loc_num_elem_sur; 135a515125bSLeila Ghaffari CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur); 136a515125bSLeila Ghaffari CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur, 137a515125bSLeila Ghaffari &q_data_sur); 138a515125bSLeila Ghaffari 139a515125bSLeila Ghaffari // ---- CEED Operator 140a515125bSLeila Ghaffari // ----- CEED Operator for Setup (geometric factors) 141a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur); 142a515125bSLeila Ghaffari CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur, 143139613f2SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE); 144a515125bSLeila Ghaffari CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE, 145a515125bSLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_NONE); 1463b1e209bSJeremy L Thompson CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur, 147a515125bSLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 148a515125bSLeila Ghaffari 149a515125bSLeila Ghaffari // ----- CEED Operator for Physics 150002797a3SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_apply_inflow, NULL, NULL, 151002797a3SLeila Ghaffari &op_apply_inflow); 152002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "q", elem_restr_q_sur, 153a515125bSLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 154dd64951cSJames Wright CeedOperatorSetField(op_apply_inflow, "Grad_q", elem_restr_q_sur, 155dd64951cSJames Wright ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 156002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "surface qdata", elem_restr_qd_i_sur, 157a515125bSLeila Ghaffari CEED_BASIS_COLLOCATED, q_data_sur); 158002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "x", elem_restr_x_sur, 159a515125bSLeila Ghaffari ceed_data->basis_x_sur, ceed_data->x_coord); 160002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "v", elem_restr_q_sur, 161a515125bSLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 16268ae065aSJames Wright if (elem_restr_jd_i_sur) 16368ae065aSJames Wright CeedOperatorSetField(op_apply_inflow, "surface jacobian data", 16468ae065aSJames Wright elem_restr_jd_i_sur, 16568ae065aSJames Wright CEED_BASIS_COLLOCATED, jac_data_sur); 166a515125bSLeila Ghaffari 167f0b65372SJed Brown if (ceed_data->qf_apply_inflow_jacobian) { 168f0b65372SJed Brown CeedOperatorCreate(ceed, ceed_data->qf_apply_inflow_jacobian, NULL, NULL, 169f0b65372SJed Brown &op_apply_inflow_jacobian); 170f0b65372SJed Brown CeedOperatorSetField(op_apply_inflow_jacobian, "dq", elem_restr_q_sur, 171f0b65372SJed Brown ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 17268ae065aSJames Wright CeedOperatorSetField(op_apply_inflow_jacobian, "Grad_dq", elem_restr_q_sur, 17368ae065aSJames Wright ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 174f0b65372SJed Brown CeedOperatorSetField(op_apply_inflow_jacobian, "surface qdata", 175f0b65372SJed Brown elem_restr_qd_i_sur, 176f0b65372SJed Brown CEED_BASIS_COLLOCATED, q_data_sur); 177f0b65372SJed Brown CeedOperatorSetField(op_apply_inflow_jacobian, "x", elem_restr_x_sur, 178f0b65372SJed Brown ceed_data->basis_x_sur, ceed_data->x_coord); 17968ae065aSJames Wright CeedOperatorSetField(op_apply_inflow_jacobian, "surface jacobian data", 18068ae065aSJames Wright elem_restr_jd_i_sur, 18168ae065aSJames Wright CEED_BASIS_COLLOCATED, jac_data_sur); 182f0b65372SJed Brown CeedOperatorSetField(op_apply_inflow_jacobian, "v", elem_restr_q_sur, 183f0b65372SJed Brown ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 184f0b65372SJed Brown } 185f0b65372SJed Brown 186a515125bSLeila Ghaffari // ----- Apply CEED operator for Setup 187a515125bSLeila Ghaffari CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur, 188a515125bSLeila Ghaffari CEED_REQUEST_IMMEDIATE); 189a515125bSLeila Ghaffari 190002797a3SLeila Ghaffari // ----- Apply Sub-Operator for Physics 191002797a3SLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_inflow); 192f0b65372SJed Brown if (op_apply_ijacobian) 193f0b65372SJed Brown CeedCompositeOperatorAddSub(*op_apply_ijacobian, op_apply_inflow_jacobian); 194a515125bSLeila Ghaffari 195a515125bSLeila Ghaffari // ----- Cleanup 196a515125bSLeila Ghaffari CeedVectorDestroy(&q_data_sur); 19768ae065aSJames Wright CeedVectorDestroy(&jac_data_sur); 198a515125bSLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_q_sur); 199a515125bSLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_x_sur); 200a515125bSLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_qd_i_sur); 20168ae065aSJames Wright CeedElemRestrictionDestroy(&elem_restr_jd_i_sur); 202a515125bSLeila Ghaffari CeedOperatorDestroy(&op_setup_sur); 203002797a3SLeila Ghaffari CeedOperatorDestroy(&op_apply_inflow); 204f0b65372SJed Brown CeedOperatorDestroy(&op_apply_inflow_jacobian); 205a515125bSLeila Ghaffari } 206a515125bSLeila Ghaffari 207002797a3SLeila Ghaffari // --- Create Sub-Operator for outflow boundaries 208002797a3SLeila Ghaffari for (CeedInt i=0; i < bc->num_outflow; i++) { 209f0b65372SJed Brown CeedVector q_data_sur, jac_data_sur; 210f0b65372SJed Brown CeedOperator op_setup_sur, op_apply_outflow, 211f0b65372SJed Brown op_apply_outflow_jacobian = NULL; 212f0b65372SJed Brown CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur, 213f0b65372SJed Brown elem_restr_jd_i_sur; 214002797a3SLeila Ghaffari 215002797a3SLeila Ghaffari // ---- CEED Restriction 216002797a3SLeila Ghaffari ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->outflows[i], 217002797a3SLeila Ghaffari Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur, 218002797a3SLeila Ghaffari &elem_restr_qd_i_sur); 219002797a3SLeila Ghaffari CHKERRQ(ierr); 2202556a851SJed Brown if (jac_data_size_sur > 0) { 2212556a851SJed Brown // State-dependent data will be passed from residual to Jacobian. This will be collocated. 222f0b65372SJed Brown ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->outflows[i], 223f0b65372SJed Brown Q_sur, jac_data_size_sur, NULL, NULL, 224f0b65372SJed Brown &elem_restr_jd_i_sur); 225f0b65372SJed Brown CHKERRQ(ierr); 2262556a851SJed Brown CeedElemRestrictionCreateVector(elem_restr_jd_i_sur, &jac_data_sur, NULL); 2272556a851SJed Brown } else { 2282556a851SJed Brown elem_restr_jd_i_sur = NULL; 2292556a851SJed Brown jac_data_sur = NULL; 2302556a851SJed Brown } 231002797a3SLeila Ghaffari 232002797a3SLeila Ghaffari // ---- CEED Vector 233002797a3SLeila Ghaffari PetscInt loc_num_elem_sur; 234002797a3SLeila Ghaffari CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur); 235002797a3SLeila Ghaffari CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur, 236002797a3SLeila Ghaffari &q_data_sur); 237002797a3SLeila Ghaffari 238002797a3SLeila Ghaffari // ---- CEED Operator 239002797a3SLeila Ghaffari // ----- CEED Operator for Setup (geometric factors) 240002797a3SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur); 241002797a3SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur, 242002797a3SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE); 243002797a3SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE, 244002797a3SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_NONE); 245002797a3SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur, 246002797a3SLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 247002797a3SLeila Ghaffari 248002797a3SLeila Ghaffari // ----- CEED Operator for Physics 249002797a3SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_apply_outflow, NULL, NULL, 250002797a3SLeila Ghaffari &op_apply_outflow); 251002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "q", elem_restr_q_sur, 252002797a3SLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 253dd64951cSJames Wright CeedOperatorSetField(op_apply_outflow, "Grad_q", elem_restr_q_sur, 254dd64951cSJames Wright ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 255002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "surface qdata", elem_restr_qd_i_sur, 256002797a3SLeila Ghaffari CEED_BASIS_COLLOCATED, q_data_sur); 257002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "x", elem_restr_x_sur, 258002797a3SLeila Ghaffari ceed_data->basis_x_sur, ceed_data->x_coord); 259002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "v", elem_restr_q_sur, 260002797a3SLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 2612556a851SJed Brown if (elem_restr_jd_i_sur) 262f0b65372SJed Brown CeedOperatorSetField(op_apply_outflow, "surface jacobian data", 263f0b65372SJed Brown elem_restr_jd_i_sur, 264f0b65372SJed Brown CEED_BASIS_COLLOCATED, jac_data_sur); 265f0b65372SJed Brown 266f0b65372SJed Brown if (ceed_data->qf_apply_outflow_jacobian) { 267f0b65372SJed Brown CeedOperatorCreate(ceed, ceed_data->qf_apply_outflow_jacobian, NULL, NULL, 268f0b65372SJed Brown &op_apply_outflow_jacobian); 269f0b65372SJed Brown CeedOperatorSetField(op_apply_outflow_jacobian, "dq", elem_restr_q_sur, 270f0b65372SJed Brown ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 271b01ba163SJames Wright CeedOperatorSetField(op_apply_outflow_jacobian, "Grad_dq", elem_restr_q_sur, 272b01ba163SJames Wright ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 273f0b65372SJed Brown CeedOperatorSetField(op_apply_outflow_jacobian, "surface qdata", 274f0b65372SJed Brown elem_restr_qd_i_sur, 275f0b65372SJed Brown CEED_BASIS_COLLOCATED, q_data_sur); 276b01ba163SJames Wright CeedOperatorSetField(op_apply_outflow_jacobian, "x", elem_restr_x_sur, 277b01ba163SJames Wright ceed_data->basis_x_sur, ceed_data->x_coord); 278f0b65372SJed Brown CeedOperatorSetField(op_apply_outflow_jacobian, "surface jacobian data", 279f0b65372SJed Brown elem_restr_jd_i_sur, 280f0b65372SJed Brown CEED_BASIS_COLLOCATED, jac_data_sur); 281f0b65372SJed Brown CeedOperatorSetField(op_apply_outflow_jacobian, "v", elem_restr_q_sur, 282f0b65372SJed Brown ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 283f0b65372SJed Brown } 284002797a3SLeila Ghaffari 285002797a3SLeila Ghaffari // ----- Apply CEED operator for Setup 286002797a3SLeila Ghaffari CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur, 287002797a3SLeila Ghaffari CEED_REQUEST_IMMEDIATE); 288002797a3SLeila Ghaffari 289002797a3SLeila Ghaffari // ----- Apply Sub-Operator for Physics 290002797a3SLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_outflow); 291f0b65372SJed Brown if (op_apply_ijacobian) 292f0b65372SJed Brown CeedCompositeOperatorAddSub(*op_apply_ijacobian, op_apply_outflow_jacobian); 293002797a3SLeila Ghaffari 294002797a3SLeila Ghaffari // ----- Cleanup 295002797a3SLeila Ghaffari CeedVectorDestroy(&q_data_sur); 296f0b65372SJed Brown CeedVectorDestroy(&jac_data_sur); 297002797a3SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_q_sur); 298002797a3SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_x_sur); 299002797a3SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_qd_i_sur); 300f0b65372SJed Brown CeedElemRestrictionDestroy(&elem_restr_jd_i_sur); 301002797a3SLeila Ghaffari CeedOperatorDestroy(&op_setup_sur); 302002797a3SLeila Ghaffari CeedOperatorDestroy(&op_apply_outflow); 303f0b65372SJed Brown CeedOperatorDestroy(&op_apply_outflow_jacobian); 304002797a3SLeila Ghaffari } 305002797a3SLeila Ghaffari } 30692ada588SJames Wright 30792ada588SJames Wright // ----- Get Context Labels for Operator 30892ada588SJames Wright CeedOperatorContextGetFieldLabel(*op_apply, "solution time", 30992ada588SJames Wright &phys->solution_time_label); 310bb8a0c61SJames Wright CeedOperatorContextGetFieldLabel(*op_apply, "timestep size", 311bb8a0c61SJames Wright &phys->timestep_size_label); 31292ada588SJames Wright 313a515125bSLeila Ghaffari PetscFunctionReturn(0); 314a515125bSLeila Ghaffari } 315a515125bSLeila Ghaffari 316a515125bSLeila Ghaffari PetscErrorCode SetupLibceed(Ceed ceed, CeedData ceed_data, DM dm, User user, 317c848b8b7SJed Brown AppCtx app_ctx, ProblemData *problem, SimpleBC bc) { 318a515125bSLeila Ghaffari PetscErrorCode ierr; 319a515125bSLeila Ghaffari PetscFunctionBeginUser; 320a515125bSLeila Ghaffari 321a515125bSLeila Ghaffari // ***************************************************************************** 322a515125bSLeila Ghaffari // Set up CEED objects for the interior domain (volume) 323a515125bSLeila Ghaffari // ***************************************************************************** 324a515125bSLeila Ghaffari const PetscInt num_comp_q = 5; 325a515125bSLeila Ghaffari const CeedInt dim = problem->dim, 326a515125bSLeila Ghaffari num_comp_x = problem->dim, 327a515125bSLeila Ghaffari q_data_size_vol = problem->q_data_size_vol, 328f0b65372SJed Brown jac_data_size_vol = num_comp_q + 6 + 3, 329a515125bSLeila Ghaffari P = app_ctx->degree + 1, 330a515125bSLeila Ghaffari Q = P + app_ctx->q_extra; 331752f40e3SJed Brown CeedElemRestriction elem_restr_jd_i; 332752f40e3SJed Brown CeedVector jac_data; 333a515125bSLeila Ghaffari 334a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 335a515125bSLeila Ghaffari // CEED Bases 336a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 337a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_q, P, Q, CEED_GAUSS, 338a515125bSLeila Ghaffari &ceed_data->basis_q); 339a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, Q, CEED_GAUSS, 340a515125bSLeila Ghaffari &ceed_data->basis_x); 341a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, P, 342a515125bSLeila Ghaffari CEED_GAUSS_LOBATTO, &ceed_data->basis_xc); 343a515125bSLeila Ghaffari 344a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 345a515125bSLeila Ghaffari // CEED Restrictions 346a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 347a515125bSLeila Ghaffari // -- Create restriction 3486b1ccf21SJeremy L Thompson ierr = GetRestrictionForDomain(ceed, dm, 0, 0, 0, Q, q_data_size_vol, 3496b1ccf21SJeremy L Thompson &ceed_data->elem_restr_q, &ceed_data->elem_restr_x, 350a515125bSLeila Ghaffari &ceed_data->elem_restr_qd_i); CHKERRQ(ierr); 351752f40e3SJed Brown 352752f40e3SJed Brown ierr = GetRestrictionForDomain(ceed, dm, 0, 0, 0, Q, jac_data_size_vol, 353752f40e3SJed Brown NULL, NULL, 354752f40e3SJed Brown &elem_restr_jd_i); CHKERRQ(ierr); 355a515125bSLeila Ghaffari // -- Create E vectors 356a515125bSLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_ceed, NULL); 357a515125bSLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_dot_ceed, 358a515125bSLeila Ghaffari NULL); 359a515125bSLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->g_ceed, NULL); 360a515125bSLeila Ghaffari 361a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 362a515125bSLeila Ghaffari // CEED QFunctions 363a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 364a515125bSLeila Ghaffari // -- Create QFunction for quadrature data 3659785fe93SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->setup_vol.qfunction, 3669785fe93SJed Brown problem->setup_vol.qfunction_loc, 367a515125bSLeila Ghaffari &ceed_data->qf_setup_vol); 36815a3537eSJed Brown if (problem->setup_vol.qfunction_context) { 36915a3537eSJed Brown CeedQFunctionSetContext(ceed_data->qf_setup_vol, 37015a3537eSJed Brown problem->setup_vol.qfunction_context); 37115a3537eSJed Brown CeedQFunctionContextDestroy(&problem->setup_vol.qfunction_context); 37215a3537eSJed Brown } 373a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_vol, "dx", num_comp_x*dim, 374a515125bSLeila Ghaffari CEED_EVAL_GRAD); 375a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_vol, "weight", 1, CEED_EVAL_WEIGHT); 3763b1e209bSJeremy L Thompson CeedQFunctionAddOutput(ceed_data->qf_setup_vol, "qdata", q_data_size_vol, 377a515125bSLeila Ghaffari CEED_EVAL_NONE); 378a515125bSLeila Ghaffari 379a515125bSLeila Ghaffari // -- Create QFunction for ICs 3809785fe93SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->ics.qfunction, 3819785fe93SJed Brown problem->ics.qfunction_loc, 382a515125bSLeila Ghaffari &ceed_data->qf_ics); 38315a3537eSJed Brown CeedQFunctionSetContext(ceed_data->qf_ics, problem->ics.qfunction_context); 38415a3537eSJed Brown CeedQFunctionContextDestroy(&problem->ics.qfunction_context); 385a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ics, "x", num_comp_x, CEED_EVAL_INTERP); 386a515125bSLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_ics, "q0", num_comp_q, CEED_EVAL_NONE); 387a515125bSLeila Ghaffari 388a515125bSLeila Ghaffari // -- Create QFunction for RHS 3899785fe93SJed Brown if (problem->apply_vol_rhs.qfunction) { 3909785fe93SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_rhs.qfunction, 3919785fe93SJed Brown problem->apply_vol_rhs.qfunction_loc, &ceed_data->qf_rhs_vol); 39215a3537eSJed Brown CeedQFunctionSetContext(ceed_data->qf_rhs_vol, 39315a3537eSJed Brown problem->apply_vol_rhs.qfunction_context); 39415a3537eSJed Brown CeedQFunctionContextDestroy(&problem->apply_vol_rhs.qfunction_context); 395a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "q", num_comp_q, CEED_EVAL_INTERP); 396752f40e3SJed Brown CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "Grad_q", num_comp_q*dim, 397a515125bSLeila Ghaffari CEED_EVAL_GRAD); 3983b1e209bSJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "qdata", q_data_size_vol, 399a515125bSLeila Ghaffari CEED_EVAL_NONE); 400a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "x", num_comp_x, CEED_EVAL_INTERP); 401a515125bSLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "v", num_comp_q, 402a515125bSLeila Ghaffari CEED_EVAL_INTERP); 403752f40e3SJed Brown CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "Grad_v", num_comp_q*dim, 404a515125bSLeila Ghaffari CEED_EVAL_GRAD); 405a515125bSLeila Ghaffari } 406a515125bSLeila Ghaffari 407a515125bSLeila Ghaffari // -- Create QFunction for IFunction 4089785fe93SJed Brown if (problem->apply_vol_ifunction.qfunction) { 4099785fe93SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ifunction.qfunction, 4109785fe93SJed Brown problem->apply_vol_ifunction.qfunction_loc, &ceed_data->qf_ifunction_vol); 41115a3537eSJed Brown CeedQFunctionSetContext(ceed_data->qf_ifunction_vol, 41215a3537eSJed Brown problem->apply_vol_ifunction.qfunction_context); 41315a3537eSJed Brown CeedQFunctionContextDestroy(&problem->apply_vol_ifunction.qfunction_context); 414a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q", num_comp_q, 415a515125bSLeila Ghaffari CEED_EVAL_INTERP); 416752f40e3SJed Brown CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "Grad_q", num_comp_q*dim, 417a515125bSLeila Ghaffari CEED_EVAL_GRAD); 4183b1e209bSJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q dot", num_comp_q, 419a515125bSLeila Ghaffari CEED_EVAL_INTERP); 4203b1e209bSJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "qdata", q_data_size_vol, 421a515125bSLeila Ghaffari CEED_EVAL_NONE); 422a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "x", num_comp_x, 423a515125bSLeila Ghaffari CEED_EVAL_INTERP); 424a515125bSLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "v", num_comp_q, 425a515125bSLeila Ghaffari CEED_EVAL_INTERP); 426752f40e3SJed Brown CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "Grad_v", num_comp_q*dim, 427a515125bSLeila Ghaffari CEED_EVAL_GRAD); 428752f40e3SJed Brown CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "jac_data", 429752f40e3SJed Brown jac_data_size_vol, CEED_EVAL_NONE); 430a515125bSLeila Ghaffari } 431a515125bSLeila Ghaffari 432f0b65372SJed Brown CeedQFunction qf_ijacobian_vol = NULL; 433f0b65372SJed Brown if (problem->apply_vol_ijacobian.qfunction) { 434f0b65372SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ijacobian.qfunction, 435f0b65372SJed Brown problem->apply_vol_ijacobian.qfunction_loc, &qf_ijacobian_vol); 436f0b65372SJed Brown CeedQFunctionSetContext(qf_ijacobian_vol, 437f0b65372SJed Brown problem->apply_vol_ijacobian.qfunction_context); 438f0b65372SJed Brown CeedQFunctionContextDestroy(&problem->apply_vol_ijacobian.qfunction_context); 439f0b65372SJed Brown CeedQFunctionAddInput(qf_ijacobian_vol, "dq", num_comp_q, 440f0b65372SJed Brown CEED_EVAL_INTERP); 441f0b65372SJed Brown CeedQFunctionAddInput(qf_ijacobian_vol, "Grad_dq", num_comp_q*dim, 442f0b65372SJed Brown CEED_EVAL_GRAD); 443f0b65372SJed Brown CeedQFunctionAddInput(qf_ijacobian_vol, "qdata", q_data_size_vol, 444f0b65372SJed Brown CEED_EVAL_NONE); 445f0b65372SJed Brown CeedQFunctionAddInput(qf_ijacobian_vol, "x", num_comp_x, 446f0b65372SJed Brown CEED_EVAL_INTERP); 447f0b65372SJed Brown CeedQFunctionAddInput(qf_ijacobian_vol, "jac_data", 448f0b65372SJed Brown jac_data_size_vol, CEED_EVAL_NONE); 449f0b65372SJed Brown CeedQFunctionAddOutput(qf_ijacobian_vol, "v", num_comp_q, 450f0b65372SJed Brown CEED_EVAL_INTERP); 451f0b65372SJed Brown CeedQFunctionAddOutput(qf_ijacobian_vol, "Grad_v", num_comp_q*dim, 452f0b65372SJed Brown CEED_EVAL_GRAD); 453f0b65372SJed Brown } 454f0b65372SJed Brown 455a515125bSLeila Ghaffari // --------------------------------------------------------------------------- 456a515125bSLeila Ghaffari // Element coordinates 457a515125bSLeila Ghaffari // --------------------------------------------------------------------------- 458a515125bSLeila Ghaffari // -- Create CEED vector 459a515125bSLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_x, &ceed_data->x_coord, 460a515125bSLeila Ghaffari NULL); 461a515125bSLeila Ghaffari 462a515125bSLeila Ghaffari // -- Copy PETSc vector in CEED vector 463a515125bSLeila Ghaffari Vec X_loc; 464a515125bSLeila Ghaffari const PetscScalar *X_loc_array; 465a515125bSLeila Ghaffari ierr = DMGetCoordinatesLocal(dm, &X_loc); CHKERRQ(ierr); 46605a512bdSLeila Ghaffari ierr = VecScale(X_loc, problem->dm_scale); CHKERRQ(ierr); 467a515125bSLeila Ghaffari ierr = VecGetArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr); 468a515125bSLeila Ghaffari CeedVectorSetArray(ceed_data->x_coord, CEED_MEM_HOST, CEED_COPY_VALUES, 469a515125bSLeila Ghaffari (PetscScalar *)X_loc_array); 470a515125bSLeila Ghaffari ierr = VecRestoreArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr); 471a515125bSLeila Ghaffari 472a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 473a515125bSLeila Ghaffari // CEED vectors 474a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 475a515125bSLeila Ghaffari // -- Create CEED vector for geometric data 476a515125bSLeila Ghaffari CeedInt num_qpts_vol; 477a515125bSLeila Ghaffari PetscInt loc_num_elem_vol; 478a515125bSLeila Ghaffari CeedBasisGetNumQuadraturePoints(ceed_data->basis_q, &num_qpts_vol); 479a515125bSLeila Ghaffari CeedElemRestrictionGetNumElements(ceed_data->elem_restr_q, &loc_num_elem_vol); 480a515125bSLeila Ghaffari CeedVectorCreate(ceed, q_data_size_vol*loc_num_elem_vol*num_qpts_vol, 481a515125bSLeila Ghaffari &ceed_data->q_data); 482a515125bSLeila Ghaffari 483752f40e3SJed Brown CeedElemRestrictionCreateVector(elem_restr_jd_i, &jac_data, NULL); 484a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 485a515125bSLeila Ghaffari // CEED Operators 486a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 487a515125bSLeila Ghaffari // -- Create CEED operator for quadrature data 488a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_vol, NULL, NULL, 489a515125bSLeila Ghaffari &ceed_data->op_setup_vol); 490a515125bSLeila Ghaffari CeedOperatorSetField(ceed_data->op_setup_vol, "dx", ceed_data->elem_restr_x, 491a515125bSLeila Ghaffari ceed_data->basis_x, CEED_VECTOR_ACTIVE); 492a515125bSLeila Ghaffari CeedOperatorSetField(ceed_data->op_setup_vol, "weight", 493139613f2SLeila Ghaffari CEED_ELEMRESTRICTION_NONE, ceed_data->basis_x, CEED_VECTOR_NONE); 4943b1e209bSJeremy L Thompson CeedOperatorSetField(ceed_data->op_setup_vol, "qdata", 495139613f2SLeila Ghaffari ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 496a515125bSLeila Ghaffari 497a515125bSLeila Ghaffari // -- Create CEED operator for ICs 498a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_ics, NULL, NULL, &ceed_data->op_ics); 499a515125bSLeila Ghaffari CeedOperatorSetField(ceed_data->op_ics, "x", ceed_data->elem_restr_x, 500a515125bSLeila Ghaffari ceed_data->basis_xc, CEED_VECTOR_ACTIVE); 501a515125bSLeila Ghaffari CeedOperatorSetField(ceed_data->op_ics, "q0", ceed_data->elem_restr_q, 502a515125bSLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 50315a3537eSJed Brown CeedOperatorContextGetFieldLabel(ceed_data->op_ics, "evaluation time", 50415a3537eSJed Brown &user->phys->ics_time_label); 505a515125bSLeila Ghaffari 506a515125bSLeila Ghaffari // Create CEED operator for RHS 507a515125bSLeila Ghaffari if (ceed_data->qf_rhs_vol) { 508a515125bSLeila Ghaffari CeedOperator op; 509a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_rhs_vol, NULL, NULL, &op); 510a515125bSLeila Ghaffari CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q, 511a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 512752f40e3SJed Brown CeedOperatorSetField(op, "Grad_q", ceed_data->elem_restr_q, ceed_data->basis_q, 513a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 5143b1e209bSJeremy L Thompson CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, 515139613f2SLeila Ghaffari CEED_BASIS_COLLOCATED, ceed_data->q_data); 516a515125bSLeila Ghaffari CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, 517a515125bSLeila Ghaffari ceed_data->x_coord); 518a515125bSLeila Ghaffari CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, 519a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 520752f40e3SJed Brown CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q, 521a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 522a515125bSLeila Ghaffari user->op_rhs_vol = op; 523a515125bSLeila Ghaffari } 524a515125bSLeila Ghaffari 525a515125bSLeila Ghaffari // -- CEED operator for IFunction 526a515125bSLeila Ghaffari if (ceed_data->qf_ifunction_vol) { 527a515125bSLeila Ghaffari CeedOperator op; 528a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_ifunction_vol, NULL, NULL, &op); 529a515125bSLeila Ghaffari CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q, 530a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 531752f40e3SJed Brown CeedOperatorSetField(op, "Grad_q", ceed_data->elem_restr_q, ceed_data->basis_q, 532a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 5333b1e209bSJeremy L Thompson CeedOperatorSetField(op, "q dot", ceed_data->elem_restr_q, ceed_data->basis_q, 534a515125bSLeila Ghaffari user->q_dot_ceed); 5353b1e209bSJeremy L Thompson CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, 536139613f2SLeila Ghaffari CEED_BASIS_COLLOCATED, ceed_data->q_data); 537a515125bSLeila Ghaffari CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, 538a515125bSLeila Ghaffari ceed_data->x_coord); 539a515125bSLeila Ghaffari CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, 540a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 541752f40e3SJed Brown CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q, 542a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 543752f40e3SJed Brown CeedOperatorSetField(op, "jac_data", elem_restr_jd_i, 544752f40e3SJed Brown CEED_BASIS_COLLOCATED, jac_data); 545752f40e3SJed Brown 546a515125bSLeila Ghaffari user->op_ifunction_vol = op; 547a515125bSLeila Ghaffari } 548a515125bSLeila Ghaffari 549f0b65372SJed Brown CeedOperator op_ijacobian_vol = NULL; 550f0b65372SJed Brown if (qf_ijacobian_vol) { 551f0b65372SJed Brown CeedOperator op; 552f0b65372SJed Brown CeedOperatorCreate(ceed, qf_ijacobian_vol, NULL, NULL, &op); 553f0b65372SJed Brown CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q, 554f0b65372SJed Brown CEED_VECTOR_ACTIVE); 555f0b65372SJed Brown CeedOperatorSetField(op, "Grad_dq", ceed_data->elem_restr_q, ceed_data->basis_q, 556f0b65372SJed Brown CEED_VECTOR_ACTIVE); 557f0b65372SJed Brown CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, 558f0b65372SJed Brown CEED_BASIS_COLLOCATED, ceed_data->q_data); 559f0b65372SJed Brown CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, 560f0b65372SJed Brown ceed_data->x_coord); 561f0b65372SJed Brown CeedOperatorSetField(op, "jac_data", elem_restr_jd_i, 562f0b65372SJed Brown CEED_BASIS_COLLOCATED, jac_data); 563f0b65372SJed Brown CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, 564f0b65372SJed Brown CEED_VECTOR_ACTIVE); 565f0b65372SJed Brown CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q, 566f0b65372SJed Brown CEED_VECTOR_ACTIVE); 567f0b65372SJed Brown op_ijacobian_vol = op; 568f0b65372SJed Brown CeedQFunctionDestroy(&qf_ijacobian_vol); 569f0b65372SJed Brown } 570f0b65372SJed Brown 571a515125bSLeila Ghaffari // ***************************************************************************** 572a515125bSLeila Ghaffari // Set up CEED objects for the exterior domain (surface) 573a515125bSLeila Ghaffari // ***************************************************************************** 574a515125bSLeila Ghaffari CeedInt height = 1, 575a515125bSLeila Ghaffari dim_sur = dim - height, 576a515125bSLeila Ghaffari P_sur = app_ctx->degree + 1, 577a515125bSLeila Ghaffari Q_sur = P_sur + app_ctx->q_extra; 578f0b65372SJed Brown const CeedInt q_data_size_sur = problem->q_data_size_sur, 579f0b65372SJed Brown jac_data_size_sur = problem->jac_data_size_sur; 580a515125bSLeila Ghaffari 581a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 582a515125bSLeila Ghaffari // CEED Bases 583a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 584a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_q, P_sur, Q_sur, 585a515125bSLeila Ghaffari CEED_GAUSS, &ceed_data->basis_q_sur); 586a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_x, 2, Q_sur, CEED_GAUSS, 587a515125bSLeila Ghaffari &ceed_data->basis_x_sur); 588a515125bSLeila Ghaffari 589a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 590a515125bSLeila Ghaffari // CEED QFunctions 591a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 592a515125bSLeila Ghaffari // -- Create QFunction for quadrature data 5939785fe93SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->setup_sur.qfunction, 5949785fe93SJed Brown problem->setup_sur.qfunction_loc, 595a515125bSLeila Ghaffari &ceed_data->qf_setup_sur); 59615a3537eSJed Brown if (problem->setup_sur.qfunction_context) { 59715a3537eSJed Brown CeedQFunctionSetContext(ceed_data->qf_setup_sur, 59815a3537eSJed Brown problem->setup_sur.qfunction_context); 59915a3537eSJed Brown CeedQFunctionContextDestroy(&problem->setup_sur.qfunction_context); 60015a3537eSJed Brown } 601a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_sur, "dx", num_comp_x*dim_sur, 602a515125bSLeila Ghaffari CEED_EVAL_GRAD); 603a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_sur, "weight", 1, CEED_EVAL_WEIGHT); 6043b1e209bSJeremy L Thompson CeedQFunctionAddOutput(ceed_data->qf_setup_sur, "surface qdata", 605002797a3SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 606a515125bSLeila Ghaffari 607002797a3SLeila Ghaffari // -- Creat QFunction for inflow boundaries 6089785fe93SJed Brown if (problem->apply_inflow.qfunction) { 6099785fe93SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->apply_inflow.qfunction, 6109785fe93SJed Brown problem->apply_inflow.qfunction_loc, &ceed_data->qf_apply_inflow); 61115a3537eSJed Brown CeedQFunctionSetContext(ceed_data->qf_apply_inflow, 61215a3537eSJed Brown problem->apply_inflow.qfunction_context); 61315a3537eSJed Brown CeedQFunctionContextDestroy(&problem->apply_inflow.qfunction_context); 614002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "q", num_comp_q, 615a515125bSLeila Ghaffari CEED_EVAL_INTERP); 616dd64951cSJames Wright CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "Grad_q", num_comp_q*(dim-1), 617dd64951cSJames Wright CEED_EVAL_GRAD); 618002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "surface qdata", 619002797a3SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 620002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "x", num_comp_x, 621a515125bSLeila Ghaffari CEED_EVAL_INTERP); 622002797a3SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_apply_inflow, "v", num_comp_q, 623002797a3SLeila Ghaffari CEED_EVAL_INTERP); 62468ae065aSJames Wright if (jac_data_size_sur) 62568ae065aSJames Wright CeedQFunctionAddOutput(ceed_data->qf_apply_inflow, "surface jacobian data", 62668ae065aSJames Wright jac_data_size_sur, 62768ae065aSJames Wright CEED_EVAL_NONE); 628002797a3SLeila Ghaffari } 629f0b65372SJed Brown if (problem->apply_inflow_jacobian.qfunction) { 630f0b65372SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->apply_inflow_jacobian.qfunction, 631f0b65372SJed Brown problem->apply_inflow_jacobian.qfunction_loc, 632f0b65372SJed Brown &ceed_data->qf_apply_inflow_jacobian); 633f0b65372SJed Brown CeedQFunctionSetContext(ceed_data->qf_apply_inflow_jacobian, 634f0b65372SJed Brown problem->apply_inflow_jacobian.qfunction_context); 635f0b65372SJed Brown CeedQFunctionContextDestroy(&problem->apply_inflow_jacobian.qfunction_context); 636f0b65372SJed Brown CeedQFunctionAddInput(ceed_data->qf_apply_inflow_jacobian, "dq", num_comp_q, 637f0b65372SJed Brown CEED_EVAL_INTERP); 63868ae065aSJames Wright CeedQFunctionAddInput(ceed_data->qf_apply_inflow_jacobian, "Grad_dq", 63968ae065aSJames Wright num_comp_q*dim_sur, CEED_EVAL_GRAD); 640f0b65372SJed Brown CeedQFunctionAddInput(ceed_data->qf_apply_inflow_jacobian, "surface qdata", 641f0b65372SJed Brown q_data_size_sur, CEED_EVAL_NONE); 642f0b65372SJed Brown CeedQFunctionAddInput(ceed_data->qf_apply_inflow_jacobian, "x", num_comp_x, 643f0b65372SJed Brown CEED_EVAL_INTERP); 64468ae065aSJames Wright CeedQFunctionAddInput(ceed_data->qf_apply_inflow_jacobian, 64568ae065aSJames Wright "surface jacobian data", 64668ae065aSJames Wright jac_data_size_sur, CEED_EVAL_NONE); 647f0b65372SJed Brown CeedQFunctionAddOutput(ceed_data->qf_apply_inflow_jacobian, "v", num_comp_q, 648f0b65372SJed Brown CEED_EVAL_INTERP); 649f0b65372SJed Brown } 650002797a3SLeila Ghaffari 651002797a3SLeila Ghaffari // -- Creat QFunction for outflow boundaries 6529785fe93SJed Brown if (problem->apply_outflow.qfunction) { 6539785fe93SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->apply_outflow.qfunction, 6549785fe93SJed Brown problem->apply_outflow.qfunction_loc, &ceed_data->qf_apply_outflow); 65515a3537eSJed Brown CeedQFunctionSetContext(ceed_data->qf_apply_outflow, 65615a3537eSJed Brown problem->apply_outflow.qfunction_context); 65715a3537eSJed Brown CeedQFunctionContextDestroy(&problem->apply_outflow.qfunction_context); 658002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "q", num_comp_q, 659002797a3SLeila Ghaffari CEED_EVAL_INTERP); 660dd64951cSJames Wright CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "Grad_q", num_comp_q*(dim-1), 661dd64951cSJames Wright CEED_EVAL_GRAD); 662002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "surface qdata", 663002797a3SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 664002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "x", num_comp_x, 665002797a3SLeila Ghaffari CEED_EVAL_INTERP); 666002797a3SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_apply_outflow, "v", num_comp_q, 667a515125bSLeila Ghaffari CEED_EVAL_INTERP); 6682556a851SJed Brown if (jac_data_size_sur) 669f0b65372SJed Brown CeedQFunctionAddOutput(ceed_data->qf_apply_outflow, "surface jacobian data", 670f0b65372SJed Brown jac_data_size_sur, 671f0b65372SJed Brown CEED_EVAL_NONE); 672f0b65372SJed Brown } 673f0b65372SJed Brown if (problem->apply_outflow_jacobian.qfunction) { 674f0b65372SJed Brown CeedQFunctionCreateInterior(ceed, 1, problem->apply_outflow_jacobian.qfunction, 675f0b65372SJed Brown problem->apply_outflow_jacobian.qfunction_loc, 676f0b65372SJed Brown &ceed_data->qf_apply_outflow_jacobian); 677f0b65372SJed Brown CeedQFunctionSetContext(ceed_data->qf_apply_outflow_jacobian, 678f0b65372SJed Brown problem->apply_outflow_jacobian.qfunction_context); 679f0b65372SJed Brown CeedQFunctionContextDestroy(&problem->apply_outflow_jacobian.qfunction_context); 680f0b65372SJed Brown CeedQFunctionAddInput(ceed_data->qf_apply_outflow_jacobian, "dq", num_comp_q, 681f0b65372SJed Brown CEED_EVAL_INTERP); 68268ae065aSJames Wright CeedQFunctionAddInput(ceed_data->qf_apply_outflow_jacobian, "Grad_dq", 68368ae065aSJames Wright num_comp_q*dim_sur, CEED_EVAL_GRAD); 684f0b65372SJed Brown CeedQFunctionAddInput(ceed_data->qf_apply_outflow_jacobian, "surface qdata", 685f0b65372SJed Brown q_data_size_sur, CEED_EVAL_NONE); 686b01ba163SJames Wright CeedQFunctionAddInput(ceed_data->qf_apply_outflow_jacobian, "x", num_comp_x, 687b01ba163SJames Wright CEED_EVAL_INTERP); 688f0b65372SJed Brown CeedQFunctionAddInput(ceed_data->qf_apply_outflow_jacobian, 689f0b65372SJed Brown "surface jacobian data", 690f0b65372SJed Brown jac_data_size_sur, CEED_EVAL_NONE); 691f0b65372SJed Brown CeedQFunctionAddOutput(ceed_data->qf_apply_outflow_jacobian, "v", num_comp_q, 692f0b65372SJed Brown CEED_EVAL_INTERP); 693a515125bSLeila Ghaffari } 694a515125bSLeila Ghaffari 695a515125bSLeila Ghaffari // ***************************************************************************** 696a515125bSLeila Ghaffari // CEED Operator Apply 697a515125bSLeila Ghaffari // ***************************************************************************** 698a515125bSLeila Ghaffari // -- Apply CEED Operator for the geometric data 699a515125bSLeila Ghaffari CeedOperatorApply(ceed_data->op_setup_vol, ceed_data->x_coord, 700a515125bSLeila Ghaffari ceed_data->q_data, CEED_REQUEST_IMMEDIATE); 701a515125bSLeila Ghaffari 702a515125bSLeila Ghaffari // -- Create and apply CEED Composite Operator for the entire domain 703a515125bSLeila Ghaffari if (!user->phys->implicit) { // RHS 704a515125bSLeila Ghaffari ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys, 705f0b65372SJed Brown user->op_rhs_vol, NULL, height, P_sur, Q_sur, 706f0b65372SJed Brown q_data_size_sur, 0, 707f0b65372SJed Brown &user->op_rhs, NULL); CHKERRQ(ierr); 708a515125bSLeila Ghaffari } else { // IFunction 709a515125bSLeila Ghaffari ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys, 710f0b65372SJed Brown user->op_ifunction_vol, op_ijacobian_vol, 711f0b65372SJed Brown height, P_sur, Q_sur, 712f0b65372SJed Brown q_data_size_sur, jac_data_size_sur, 713f0b65372SJed Brown &user->op_ifunction, 714f0b65372SJed Brown op_ijacobian_vol ? &user->op_ijacobian : NULL); CHKERRQ(ierr); 715f0b65372SJed Brown if (user->op_ijacobian) { 716f0b65372SJed Brown CeedOperatorContextGetFieldLabel(user->op_ijacobian, "ijacobian time shift", 717f0b65372SJed Brown &user->phys->ijacobian_time_shift_label); 718f0b65372SJed Brown } 719*6d0190e2SJames Wright if (problem->use_dirichlet_ceed) { 720*6d0190e2SJames Wright PetscCall(SetupStrongBC_Ceed(ceed, ceed_data, dm, user, app_ctx, problem, bc, 721*6d0190e2SJames Wright Q_sur, q_data_size_sur)); 722*6d0190e2SJames Wright } 723f0b65372SJed Brown 724a515125bSLeila Ghaffari } 725752f40e3SJed Brown CeedElemRestrictionDestroy(&elem_restr_jd_i); 726e22e0f1cSLeila Ghaffari CeedOperatorDestroy(&op_ijacobian_vol); 727752f40e3SJed Brown CeedVectorDestroy(&jac_data); 728a515125bSLeila Ghaffari PetscFunctionReturn(0); 729a515125bSLeila Ghaffari } 730