xref: /honee/src/setuplibceed.c (revision f0b653724bc7ff3458409f59c4d1e4b1ef161295)
1727da7e7SJeremy L Thompson // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors.
2727da7e7SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3a515125bSLeila Ghaffari //
4727da7e7SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause
5a515125bSLeila Ghaffari //
6727da7e7SJeremy L Thompson // This file is part of CEED:  http://github.com/ceed
7a515125bSLeila Ghaffari 
8a515125bSLeila Ghaffari /// @file
9a515125bSLeila Ghaffari /// Setup libCEED for Navier-Stokes example using PETSc
10a515125bSLeila Ghaffari 
11a515125bSLeila Ghaffari #include "../navierstokes.h"
12a515125bSLeila Ghaffari 
13a515125bSLeila Ghaffari // Utility function - essential BC dofs are encoded in closure indices as -(i+1).
14a515125bSLeila Ghaffari PetscInt Involute(PetscInt i) {
15a515125bSLeila Ghaffari   return i >= 0 ? i : -(i+1);
16a515125bSLeila Ghaffari }
17a515125bSLeila Ghaffari 
18a515125bSLeila Ghaffari // Utility function to create local CEED restriction
196b1ccf21SJeremy L Thompson PetscErrorCode CreateRestrictionFromPlex(Ceed ceed, DM dm, CeedInt height,
206b1ccf21SJeremy L Thompson     DMLabel domain_label, CeedInt value, CeedElemRestriction *elem_restr) {
216b1ccf21SJeremy L Thompson   PetscInt num_elem, elem_size, num_dof, num_comp, *elem_restr_offsets;
22a515125bSLeila Ghaffari   PetscErrorCode ierr;
236b1ccf21SJeremy L Thompson 
24a515125bSLeila Ghaffari   PetscFunctionBeginUser;
256b1ccf21SJeremy L Thompson   ierr = DMPlexGetLocalOffsets(dm, domain_label, value, height, 0, &num_elem,
266b1ccf21SJeremy L Thompson                                &elem_size, &num_comp, &num_dof, &elem_restr_offsets);
276b1ccf21SJeremy L Thompson   CHKERRQ(ierr);
28a515125bSLeila Ghaffari 
296b1ccf21SJeremy L Thompson   CeedElemRestrictionCreate(ceed, num_elem, elem_size, num_comp,
306b1ccf21SJeremy L Thompson                             1, num_dof, CEED_MEM_HOST, CEED_COPY_VALUES,
316b1ccf21SJeremy L Thompson                             elem_restr_offsets, elem_restr);
326b1ccf21SJeremy L Thompson   ierr = PetscFree(elem_restr_offsets); CHKERRQ(ierr);
33a515125bSLeila Ghaffari 
34a515125bSLeila Ghaffari   PetscFunctionReturn(0);
35a515125bSLeila Ghaffari }
36a515125bSLeila Ghaffari 
37a515125bSLeila Ghaffari // Utility function to get Ceed Restriction for each domain
38a515125bSLeila Ghaffari PetscErrorCode GetRestrictionForDomain(Ceed ceed, DM dm, CeedInt height,
39a515125bSLeila Ghaffari                                        DMLabel domain_label, PetscInt value,
406b1ccf21SJeremy L Thompson                                        CeedInt Q, CeedInt q_data_size,
41a515125bSLeila Ghaffari                                        CeedElemRestriction *elem_restr_q,
42a515125bSLeila Ghaffari                                        CeedElemRestriction *elem_restr_x,
43a515125bSLeila Ghaffari                                        CeedElemRestriction *elem_restr_qd_i) {
44a515125bSLeila Ghaffari   DM             dm_coord;
45a515125bSLeila Ghaffari   CeedInt        dim, loc_num_elem;
46a515125bSLeila Ghaffari   CeedInt        Q_dim;
47395c96d3SJed Brown   CeedElemRestriction elem_restr_tmp;
48a515125bSLeila Ghaffari   PetscErrorCode ierr;
49a515125bSLeila Ghaffari   PetscFunctionBeginUser;
50a515125bSLeila Ghaffari 
51a515125bSLeila Ghaffari   ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr);
52a515125bSLeila Ghaffari   dim -= height;
53a515125bSLeila Ghaffari   Q_dim = CeedIntPow(Q, dim);
54395c96d3SJed Brown   ierr = CreateRestrictionFromPlex(ceed, dm, height, domain_label, value,
55395c96d3SJed Brown                                    &elem_restr_tmp);
56395c96d3SJed Brown   CHKERRQ(ierr);
57395c96d3SJed Brown   if (elem_restr_q) *elem_restr_q = elem_restr_tmp;
58395c96d3SJed Brown   if (elem_restr_x) {
59a515125bSLeila Ghaffari     ierr = DMGetCoordinateDM(dm, &dm_coord); CHKERRQ(ierr);
60a515125bSLeila Ghaffari     ierr = DMPlexSetClosurePermutationTensor(dm_coord, PETSC_DETERMINE, NULL);
61a515125bSLeila Ghaffari     CHKERRQ(ierr);
626b1ccf21SJeremy L Thompson     ierr = CreateRestrictionFromPlex(ceed, dm_coord, height, domain_label, value,
636b1ccf21SJeremy L Thompson                                      elem_restr_x);
646b1ccf21SJeremy L Thompson     CHKERRQ(ierr);
65395c96d3SJed Brown   }
66395c96d3SJed Brown   if (elem_restr_qd_i) {
67395c96d3SJed Brown     CeedElemRestrictionGetNumElements(elem_restr_tmp, &loc_num_elem);
68a515125bSLeila Ghaffari     CeedElemRestrictionCreateStrided(ceed, loc_num_elem, Q_dim,
69a515125bSLeila Ghaffari                                      q_data_size, q_data_size*loc_num_elem*Q_dim,
70a515125bSLeila Ghaffari                                      CEED_STRIDES_BACKEND, elem_restr_qd_i);
71395c96d3SJed Brown   }
72395c96d3SJed Brown   if (!elem_restr_q) CeedElemRestrictionDestroy(&elem_restr_tmp);
73a515125bSLeila Ghaffari   PetscFunctionReturn(0);
74a515125bSLeila Ghaffari }
75a515125bSLeila Ghaffari 
76a515125bSLeila Ghaffari // Utility function to create CEED Composite Operator for the entire domain
77a515125bSLeila Ghaffari PetscErrorCode CreateOperatorForDomain(Ceed ceed, DM dm, SimpleBC bc,
78a515125bSLeila Ghaffari                                        CeedData ceed_data, Physics phys,
79*f0b65372SJed Brown                                        CeedOperator op_apply_vol,
80*f0b65372SJed Brown                                        CeedOperator op_apply_ijacobian_vol,
81*f0b65372SJed Brown                                        CeedInt height,
82*f0b65372SJed Brown                                        CeedInt P_sur, CeedInt Q_sur,
83*f0b65372SJed Brown                                        CeedInt q_data_size_sur, CeedInt jac_data_size_sur,
84*f0b65372SJed Brown                                        CeedOperator *op_apply, CeedOperator *op_apply_ijacobian) {
85002797a3SLeila Ghaffari   //CeedInt        dim;
86a515125bSLeila Ghaffari   DMLabel        domain_label;
87a515125bSLeila Ghaffari   PetscErrorCode ierr;
88a515125bSLeila Ghaffari   PetscFunctionBeginUser;
89a515125bSLeila Ghaffari 
90a515125bSLeila Ghaffari   // Create Composite Operaters
91a515125bSLeila Ghaffari   CeedCompositeOperatorCreate(ceed, op_apply);
92*f0b65372SJed Brown   if (op_apply_ijacobian)
93*f0b65372SJed Brown     CeedCompositeOperatorCreate(ceed, op_apply_ijacobian);
94a515125bSLeila Ghaffari 
95a515125bSLeila Ghaffari   // --Apply Sub-Operator for the volume
96a515125bSLeila Ghaffari   CeedCompositeOperatorAddSub(*op_apply, op_apply_vol);
97*f0b65372SJed Brown   if (op_apply_ijacobian)
98*f0b65372SJed Brown     CeedCompositeOperatorAddSub(*op_apply_ijacobian, op_apply_ijacobian_vol);
99a515125bSLeila Ghaffari 
100a515125bSLeila Ghaffari   // -- Create Sub-Operator for in/outflow BCs
101bb8a0c61SJames Wright   if (phys->has_neumann || 1) {
102a515125bSLeila Ghaffari     // --- Setup
103a515125bSLeila Ghaffari     ierr = DMGetLabel(dm, "Face Sets", &domain_label); CHKERRQ(ierr);
104002797a3SLeila Ghaffari     //ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr);
105a515125bSLeila Ghaffari 
106a515125bSLeila Ghaffari     // --- Get number of quadrature points for the boundaries
107a515125bSLeila Ghaffari     CeedInt num_qpts_sur;
108a515125bSLeila Ghaffari     CeedBasisGetNumQuadraturePoints(ceed_data->basis_q_sur, &num_qpts_sur);
109a515125bSLeila Ghaffari 
110002797a3SLeila Ghaffari     // --- Create Sub-Operator for inflow boundaries
111002797a3SLeila Ghaffari     for (CeedInt i=0; i < bc->num_inflow; i++) {
112a515125bSLeila Ghaffari       CeedVector          q_data_sur;
113*f0b65372SJed Brown       CeedOperator        op_setup_sur, op_apply_inflow,
114*f0b65372SJed Brown                           op_apply_inflow_jacobian = NULL;
115002797a3SLeila Ghaffari       CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur;
116a515125bSLeila Ghaffari 
117a515125bSLeila Ghaffari       // ---- CEED Restriction
118002797a3SLeila Ghaffari       ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->inflows[i],
119002797a3SLeila Ghaffari                                      Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur,
120002797a3SLeila Ghaffari                                      &elem_restr_qd_i_sur);
121a515125bSLeila Ghaffari       CHKERRQ(ierr);
122a515125bSLeila Ghaffari 
123a515125bSLeila Ghaffari       // ---- CEED Vector
124a515125bSLeila Ghaffari       PetscInt loc_num_elem_sur;
125a515125bSLeila Ghaffari       CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur);
126a515125bSLeila Ghaffari       CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur,
127a515125bSLeila Ghaffari                        &q_data_sur);
128a515125bSLeila Ghaffari 
129a515125bSLeila Ghaffari       // ---- CEED Operator
130a515125bSLeila Ghaffari       // ----- CEED Operator for Setup (geometric factors)
131a515125bSLeila Ghaffari       CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur);
132a515125bSLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur,
133139613f2SLeila Ghaffari                            ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE);
134a515125bSLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE,
135a515125bSLeila Ghaffari                            ceed_data->basis_x_sur, CEED_VECTOR_NONE);
1363b1e209bSJeremy L Thompson       CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur,
137a515125bSLeila Ghaffari                            CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE);
138a515125bSLeila Ghaffari 
139a515125bSLeila Ghaffari       // ----- CEED Operator for Physics
140002797a3SLeila Ghaffari       CeedOperatorCreate(ceed, ceed_data->qf_apply_inflow, NULL, NULL,
141002797a3SLeila Ghaffari                          &op_apply_inflow);
142002797a3SLeila Ghaffari       CeedOperatorSetField(op_apply_inflow, "q", elem_restr_q_sur,
143a515125bSLeila Ghaffari                            ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
144002797a3SLeila Ghaffari       CeedOperatorSetField(op_apply_inflow, "surface qdata", elem_restr_qd_i_sur,
145a515125bSLeila Ghaffari                            CEED_BASIS_COLLOCATED, q_data_sur);
146002797a3SLeila Ghaffari       CeedOperatorSetField(op_apply_inflow, "x", elem_restr_x_sur,
147a515125bSLeila Ghaffari                            ceed_data->basis_x_sur, ceed_data->x_coord);
148002797a3SLeila Ghaffari       CeedOperatorSetField(op_apply_inflow, "v", elem_restr_q_sur,
149a515125bSLeila Ghaffari                            ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
150a515125bSLeila Ghaffari 
151*f0b65372SJed Brown       if (ceed_data->qf_apply_inflow_jacobian) {
152*f0b65372SJed Brown         CeedOperatorCreate(ceed, ceed_data->qf_apply_inflow_jacobian, NULL, NULL,
153*f0b65372SJed Brown                            &op_apply_inflow_jacobian);
154*f0b65372SJed Brown         CeedOperatorSetField(op_apply_inflow_jacobian, "dq", elem_restr_q_sur,
155*f0b65372SJed Brown                              ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
156*f0b65372SJed Brown         CeedOperatorSetField(op_apply_inflow_jacobian, "surface qdata",
157*f0b65372SJed Brown                              elem_restr_qd_i_sur,
158*f0b65372SJed Brown                              CEED_BASIS_COLLOCATED, q_data_sur);
159*f0b65372SJed Brown         CeedOperatorSetField(op_apply_inflow_jacobian, "x", elem_restr_x_sur,
160*f0b65372SJed Brown                              ceed_data->basis_x_sur, ceed_data->x_coord);
161*f0b65372SJed Brown         CeedOperatorSetField(op_apply_inflow_jacobian, "v", elem_restr_q_sur,
162*f0b65372SJed Brown                              ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
163*f0b65372SJed Brown       }
164*f0b65372SJed Brown 
165a515125bSLeila Ghaffari       // ----- Apply CEED operator for Setup
166a515125bSLeila Ghaffari       CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur,
167a515125bSLeila Ghaffari                         CEED_REQUEST_IMMEDIATE);
168a515125bSLeila Ghaffari 
169002797a3SLeila Ghaffari       // ----- Apply Sub-Operator for Physics
170002797a3SLeila Ghaffari       CeedCompositeOperatorAddSub(*op_apply, op_apply_inflow);
171*f0b65372SJed Brown       if (op_apply_ijacobian)
172*f0b65372SJed Brown         CeedCompositeOperatorAddSub(*op_apply_ijacobian, op_apply_inflow_jacobian);
173a515125bSLeila Ghaffari 
174a515125bSLeila Ghaffari       // ----- Cleanup
175a515125bSLeila Ghaffari       CeedVectorDestroy(&q_data_sur);
176a515125bSLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_q_sur);
177a515125bSLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_x_sur);
178a515125bSLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_qd_i_sur);
179a515125bSLeila Ghaffari       CeedOperatorDestroy(&op_setup_sur);
180002797a3SLeila Ghaffari       CeedOperatorDestroy(&op_apply_inflow);
181*f0b65372SJed Brown       CeedOperatorDestroy(&op_apply_inflow_jacobian);
182a515125bSLeila Ghaffari     }
183a515125bSLeila Ghaffari 
184002797a3SLeila Ghaffari     // --- Create Sub-Operator for outflow boundaries
185002797a3SLeila Ghaffari     for (CeedInt i=0; i < bc->num_outflow; i++) {
186*f0b65372SJed Brown       CeedVector          q_data_sur, jac_data_sur;
187*f0b65372SJed Brown       CeedOperator        op_setup_sur, op_apply_outflow,
188*f0b65372SJed Brown                           op_apply_outflow_jacobian = NULL;
189*f0b65372SJed Brown       CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur,
190*f0b65372SJed Brown                           elem_restr_jd_i_sur;
191002797a3SLeila Ghaffari 
192002797a3SLeila Ghaffari       // ---- CEED Restriction
193002797a3SLeila Ghaffari       ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->outflows[i],
194002797a3SLeila Ghaffari                                      Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur,
195002797a3SLeila Ghaffari                                      &elem_restr_qd_i_sur);
196002797a3SLeila Ghaffari       CHKERRQ(ierr);
197*f0b65372SJed Brown       ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->outflows[i],
198*f0b65372SJed Brown                                      Q_sur, jac_data_size_sur, NULL, NULL,
199*f0b65372SJed Brown                                      &elem_restr_jd_i_sur);
200*f0b65372SJed Brown       CHKERRQ(ierr);
201002797a3SLeila Ghaffari 
202002797a3SLeila Ghaffari       // ---- CEED Vector
203002797a3SLeila Ghaffari       PetscInt loc_num_elem_sur;
204002797a3SLeila Ghaffari       CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur);
205002797a3SLeila Ghaffari       CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur,
206002797a3SLeila Ghaffari                        &q_data_sur);
207002797a3SLeila Ghaffari 
208*f0b65372SJed Brown       CeedElemRestrictionCreateVector(elem_restr_jd_i_sur, &jac_data_sur, NULL);
209*f0b65372SJed Brown 
210002797a3SLeila Ghaffari       // ---- CEED Operator
211002797a3SLeila Ghaffari       // ----- CEED Operator for Setup (geometric factors)
212002797a3SLeila Ghaffari       CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur);
213002797a3SLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur,
214002797a3SLeila Ghaffari                            ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE);
215002797a3SLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE,
216002797a3SLeila Ghaffari                            ceed_data->basis_x_sur, CEED_VECTOR_NONE);
217002797a3SLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur,
218002797a3SLeila Ghaffari                            CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE);
219002797a3SLeila Ghaffari 
220002797a3SLeila Ghaffari       // ----- CEED Operator for Physics
221002797a3SLeila Ghaffari       CeedOperatorCreate(ceed, ceed_data->qf_apply_outflow, NULL, NULL,
222002797a3SLeila Ghaffari                          &op_apply_outflow);
223002797a3SLeila Ghaffari       CeedOperatorSetField(op_apply_outflow, "q", elem_restr_q_sur,
224002797a3SLeila Ghaffari                            ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
225002797a3SLeila Ghaffari       CeedOperatorSetField(op_apply_outflow, "surface qdata", elem_restr_qd_i_sur,
226002797a3SLeila Ghaffari                            CEED_BASIS_COLLOCATED, q_data_sur);
227002797a3SLeila Ghaffari       CeedOperatorSetField(op_apply_outflow, "x", elem_restr_x_sur,
228002797a3SLeila Ghaffari                            ceed_data->basis_x_sur, ceed_data->x_coord);
229002797a3SLeila Ghaffari       CeedOperatorSetField(op_apply_outflow, "v", elem_restr_q_sur,
230002797a3SLeila Ghaffari                            ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
231*f0b65372SJed Brown       CeedOperatorSetField(op_apply_outflow, "surface jacobian data",
232*f0b65372SJed Brown                            elem_restr_jd_i_sur,
233*f0b65372SJed Brown                            CEED_BASIS_COLLOCATED, jac_data_sur);
234*f0b65372SJed Brown 
235*f0b65372SJed Brown       if (ceed_data->qf_apply_outflow_jacobian) {
236*f0b65372SJed Brown         CeedOperatorCreate(ceed, ceed_data->qf_apply_outflow_jacobian, NULL, NULL,
237*f0b65372SJed Brown                            &op_apply_outflow_jacobian);
238*f0b65372SJed Brown         CeedOperatorSetField(op_apply_outflow_jacobian, "dq", elem_restr_q_sur,
239*f0b65372SJed Brown                              ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
240*f0b65372SJed Brown         CeedOperatorSetField(op_apply_outflow_jacobian, "surface qdata",
241*f0b65372SJed Brown                              elem_restr_qd_i_sur,
242*f0b65372SJed Brown                              CEED_BASIS_COLLOCATED, q_data_sur);
243*f0b65372SJed Brown         CeedOperatorSetField(op_apply_outflow_jacobian, "surface jacobian data",
244*f0b65372SJed Brown                              elem_restr_jd_i_sur,
245*f0b65372SJed Brown                              CEED_BASIS_COLLOCATED, jac_data_sur);
246*f0b65372SJed Brown         CeedOperatorSetField(op_apply_outflow_jacobian, "v", elem_restr_q_sur,
247*f0b65372SJed Brown                              ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
248*f0b65372SJed Brown       }
249002797a3SLeila Ghaffari 
250002797a3SLeila Ghaffari       // ----- Apply CEED operator for Setup
251002797a3SLeila Ghaffari       CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur,
252002797a3SLeila Ghaffari                         CEED_REQUEST_IMMEDIATE);
253002797a3SLeila Ghaffari 
254002797a3SLeila Ghaffari       // ----- Apply Sub-Operator for Physics
255002797a3SLeila Ghaffari       CeedCompositeOperatorAddSub(*op_apply, op_apply_outflow);
256*f0b65372SJed Brown       if (op_apply_ijacobian)
257*f0b65372SJed Brown         CeedCompositeOperatorAddSub(*op_apply_ijacobian, op_apply_outflow_jacobian);
258002797a3SLeila Ghaffari 
259002797a3SLeila Ghaffari       // ----- Cleanup
260002797a3SLeila Ghaffari       CeedVectorDestroy(&q_data_sur);
261*f0b65372SJed Brown       CeedVectorDestroy(&jac_data_sur);
262002797a3SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_q_sur);
263002797a3SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_x_sur);
264002797a3SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_qd_i_sur);
265*f0b65372SJed Brown       CeedElemRestrictionDestroy(&elem_restr_jd_i_sur);
266002797a3SLeila Ghaffari       CeedOperatorDestroy(&op_setup_sur);
267002797a3SLeila Ghaffari       CeedOperatorDestroy(&op_apply_outflow);
268*f0b65372SJed Brown       CeedOperatorDestroy(&op_apply_outflow_jacobian);
269002797a3SLeila Ghaffari     }
270002797a3SLeila Ghaffari   }
27192ada588SJames Wright 
27292ada588SJames Wright   // ----- Get Context Labels for Operator
27392ada588SJames Wright   CeedOperatorContextGetFieldLabel(*op_apply, "solution time",
27492ada588SJames Wright                                    &phys->solution_time_label);
275bb8a0c61SJames Wright   CeedOperatorContextGetFieldLabel(*op_apply, "timestep size",
276bb8a0c61SJames Wright                                    &phys->timestep_size_label);
27792ada588SJames Wright 
278a515125bSLeila Ghaffari   PetscFunctionReturn(0);
279a515125bSLeila Ghaffari }
280a515125bSLeila Ghaffari 
281a515125bSLeila Ghaffari PetscErrorCode SetupLibceed(Ceed ceed, CeedData ceed_data, DM dm, User user,
282c848b8b7SJed Brown                             AppCtx app_ctx, ProblemData *problem, SimpleBC bc) {
283a515125bSLeila Ghaffari   PetscErrorCode ierr;
284a515125bSLeila Ghaffari   PetscFunctionBeginUser;
285a515125bSLeila Ghaffari 
286a515125bSLeila Ghaffari   // *****************************************************************************
287a515125bSLeila Ghaffari   // Set up CEED objects for the interior domain (volume)
288a515125bSLeila Ghaffari   // *****************************************************************************
289a515125bSLeila Ghaffari   const PetscInt num_comp_q      = 5;
290a515125bSLeila Ghaffari   const CeedInt  dim             = problem->dim,
291a515125bSLeila Ghaffari                  num_comp_x      = problem->dim,
292a515125bSLeila Ghaffari                  q_data_size_vol = problem->q_data_size_vol,
293*f0b65372SJed Brown                  jac_data_size_vol = num_comp_q + 6 + 3,
294a515125bSLeila Ghaffari                  P               = app_ctx->degree + 1,
295a515125bSLeila Ghaffari                  Q               = P + app_ctx->q_extra;
296752f40e3SJed Brown   CeedElemRestriction elem_restr_jd_i;
297752f40e3SJed Brown   CeedVector jac_data;
298a515125bSLeila Ghaffari 
299a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
300a515125bSLeila Ghaffari   // CEED Bases
301a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
302a515125bSLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_q, P, Q, CEED_GAUSS,
303a515125bSLeila Ghaffari                                   &ceed_data->basis_q);
304a515125bSLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, Q, CEED_GAUSS,
305a515125bSLeila Ghaffari                                   &ceed_data->basis_x);
306a515125bSLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, P,
307a515125bSLeila Ghaffari                                   CEED_GAUSS_LOBATTO, &ceed_data->basis_xc);
308a515125bSLeila Ghaffari 
309a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
310a515125bSLeila Ghaffari   // CEED Restrictions
311a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
312a515125bSLeila Ghaffari   // -- Create restriction
3136b1ccf21SJeremy L Thompson   ierr = GetRestrictionForDomain(ceed, dm, 0, 0, 0, Q, q_data_size_vol,
3146b1ccf21SJeremy L Thompson                                  &ceed_data->elem_restr_q, &ceed_data->elem_restr_x,
315a515125bSLeila Ghaffari                                  &ceed_data->elem_restr_qd_i); CHKERRQ(ierr);
316752f40e3SJed Brown 
317752f40e3SJed Brown   ierr = GetRestrictionForDomain(ceed, dm, 0, 0, 0, Q, jac_data_size_vol,
318752f40e3SJed Brown                                  NULL, NULL,
319752f40e3SJed Brown                                  &elem_restr_jd_i); CHKERRQ(ierr);
320a515125bSLeila Ghaffari // -- Create E vectors
321a515125bSLeila Ghaffari   CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_ceed, NULL);
322a515125bSLeila Ghaffari   CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_dot_ceed,
323a515125bSLeila Ghaffari                                   NULL);
324a515125bSLeila Ghaffari   CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->g_ceed, NULL);
325a515125bSLeila Ghaffari 
326a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
327a515125bSLeila Ghaffari   // CEED QFunctions
328a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
329a515125bSLeila Ghaffari   // -- Create QFunction for quadrature data
3309785fe93SJed Brown   CeedQFunctionCreateInterior(ceed, 1, problem->setup_vol.qfunction,
3319785fe93SJed Brown                               problem->setup_vol.qfunction_loc,
332a515125bSLeila Ghaffari                               &ceed_data->qf_setup_vol);
33315a3537eSJed Brown   if (problem->setup_vol.qfunction_context) {
33415a3537eSJed Brown     CeedQFunctionSetContext(ceed_data->qf_setup_vol,
33515a3537eSJed Brown                             problem->setup_vol.qfunction_context);
33615a3537eSJed Brown     CeedQFunctionContextDestroy(&problem->setup_vol.qfunction_context);
33715a3537eSJed Brown   }
338a515125bSLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_setup_vol, "dx", num_comp_x*dim,
339a515125bSLeila Ghaffari                         CEED_EVAL_GRAD);
340a515125bSLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_setup_vol, "weight", 1, CEED_EVAL_WEIGHT);
3413b1e209bSJeremy L Thompson   CeedQFunctionAddOutput(ceed_data->qf_setup_vol, "qdata", q_data_size_vol,
342a515125bSLeila Ghaffari                          CEED_EVAL_NONE);
343a515125bSLeila Ghaffari 
344a515125bSLeila Ghaffari   // -- Create QFunction for ICs
3459785fe93SJed Brown   CeedQFunctionCreateInterior(ceed, 1, problem->ics.qfunction,
3469785fe93SJed Brown                               problem->ics.qfunction_loc,
347a515125bSLeila Ghaffari                               &ceed_data->qf_ics);
34815a3537eSJed Brown   CeedQFunctionSetContext(ceed_data->qf_ics, problem->ics.qfunction_context);
34915a3537eSJed Brown   CeedQFunctionContextDestroy(&problem->ics.qfunction_context);
350a515125bSLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_ics, "x", num_comp_x, CEED_EVAL_INTERP);
351a515125bSLeila Ghaffari   CeedQFunctionAddOutput(ceed_data->qf_ics, "q0", num_comp_q, CEED_EVAL_NONE);
352a515125bSLeila Ghaffari 
353a515125bSLeila Ghaffari   // -- Create QFunction for RHS
3549785fe93SJed Brown   if (problem->apply_vol_rhs.qfunction) {
3559785fe93SJed Brown     CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_rhs.qfunction,
3569785fe93SJed Brown                                 problem->apply_vol_rhs.qfunction_loc, &ceed_data->qf_rhs_vol);
35715a3537eSJed Brown     CeedQFunctionSetContext(ceed_data->qf_rhs_vol,
35815a3537eSJed Brown                             problem->apply_vol_rhs.qfunction_context);
35915a3537eSJed Brown     CeedQFunctionContextDestroy(&problem->apply_vol_rhs.qfunction_context);
360a515125bSLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "q", num_comp_q, CEED_EVAL_INTERP);
361752f40e3SJed Brown     CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "Grad_q", num_comp_q*dim,
362a515125bSLeila Ghaffari                           CEED_EVAL_GRAD);
3633b1e209bSJeremy L Thompson     CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "qdata", q_data_size_vol,
364a515125bSLeila Ghaffari                           CEED_EVAL_NONE);
365a515125bSLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "x", num_comp_x, CEED_EVAL_INTERP);
366a515125bSLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "v", num_comp_q,
367a515125bSLeila Ghaffari                            CEED_EVAL_INTERP);
368752f40e3SJed Brown     CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "Grad_v", num_comp_q*dim,
369a515125bSLeila Ghaffari                            CEED_EVAL_GRAD);
370a515125bSLeila Ghaffari   }
371a515125bSLeila Ghaffari 
372a515125bSLeila Ghaffari   // -- Create QFunction for IFunction
3739785fe93SJed Brown   if (problem->apply_vol_ifunction.qfunction) {
3749785fe93SJed Brown     CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ifunction.qfunction,
3759785fe93SJed Brown                                 problem->apply_vol_ifunction.qfunction_loc, &ceed_data->qf_ifunction_vol);
37615a3537eSJed Brown     CeedQFunctionSetContext(ceed_data->qf_ifunction_vol,
37715a3537eSJed Brown                             problem->apply_vol_ifunction.qfunction_context);
37815a3537eSJed Brown     CeedQFunctionContextDestroy(&problem->apply_vol_ifunction.qfunction_context);
379a515125bSLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q", num_comp_q,
380a515125bSLeila Ghaffari                           CEED_EVAL_INTERP);
381752f40e3SJed Brown     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "Grad_q", num_comp_q*dim,
382a515125bSLeila Ghaffari                           CEED_EVAL_GRAD);
3833b1e209bSJeremy L Thompson     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q dot", num_comp_q,
384a515125bSLeila Ghaffari                           CEED_EVAL_INTERP);
3853b1e209bSJeremy L Thompson     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "qdata", q_data_size_vol,
386a515125bSLeila Ghaffari                           CEED_EVAL_NONE);
387a515125bSLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "x", num_comp_x,
388a515125bSLeila Ghaffari                           CEED_EVAL_INTERP);
389a515125bSLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "v", num_comp_q,
390a515125bSLeila Ghaffari                            CEED_EVAL_INTERP);
391752f40e3SJed Brown     CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "Grad_v", num_comp_q*dim,
392a515125bSLeila Ghaffari                            CEED_EVAL_GRAD);
393752f40e3SJed Brown     CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "jac_data",
394752f40e3SJed Brown                            jac_data_size_vol, CEED_EVAL_NONE);
395a515125bSLeila Ghaffari   }
396a515125bSLeila Ghaffari 
397*f0b65372SJed Brown   CeedQFunction qf_ijacobian_vol = NULL;
398*f0b65372SJed Brown   if (problem->apply_vol_ijacobian.qfunction) {
399*f0b65372SJed Brown     CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ijacobian.qfunction,
400*f0b65372SJed Brown                                 problem->apply_vol_ijacobian.qfunction_loc, &qf_ijacobian_vol);
401*f0b65372SJed Brown     CeedQFunctionSetContext(qf_ijacobian_vol,
402*f0b65372SJed Brown                             problem->apply_vol_ijacobian.qfunction_context);
403*f0b65372SJed Brown     CeedQFunctionContextDestroy(&problem->apply_vol_ijacobian.qfunction_context);
404*f0b65372SJed Brown     CeedQFunctionAddInput(qf_ijacobian_vol, "dq", num_comp_q,
405*f0b65372SJed Brown                           CEED_EVAL_INTERP);
406*f0b65372SJed Brown     CeedQFunctionAddInput(qf_ijacobian_vol, "Grad_dq", num_comp_q*dim,
407*f0b65372SJed Brown                           CEED_EVAL_GRAD);
408*f0b65372SJed Brown     CeedQFunctionAddInput(qf_ijacobian_vol, "qdata", q_data_size_vol,
409*f0b65372SJed Brown                           CEED_EVAL_NONE);
410*f0b65372SJed Brown     CeedQFunctionAddInput(qf_ijacobian_vol, "x", num_comp_x,
411*f0b65372SJed Brown                           CEED_EVAL_INTERP);
412*f0b65372SJed Brown     CeedQFunctionAddInput(qf_ijacobian_vol, "jac_data",
413*f0b65372SJed Brown                           jac_data_size_vol, CEED_EVAL_NONE);
414*f0b65372SJed Brown     CeedQFunctionAddOutput(qf_ijacobian_vol, "v", num_comp_q,
415*f0b65372SJed Brown                            CEED_EVAL_INTERP);
416*f0b65372SJed Brown     CeedQFunctionAddOutput(qf_ijacobian_vol, "Grad_v", num_comp_q*dim,
417*f0b65372SJed Brown                            CEED_EVAL_GRAD);
418*f0b65372SJed Brown   }
419*f0b65372SJed Brown 
420a515125bSLeila Ghaffari   // ---------------------------------------------------------------------------
421a515125bSLeila Ghaffari   // Element coordinates
422a515125bSLeila Ghaffari   // ---------------------------------------------------------------------------
423a515125bSLeila Ghaffari   // -- Create CEED vector
424a515125bSLeila Ghaffari   CeedElemRestrictionCreateVector(ceed_data->elem_restr_x, &ceed_data->x_coord,
425a515125bSLeila Ghaffari                                   NULL);
426a515125bSLeila Ghaffari 
427a515125bSLeila Ghaffari   // -- Copy PETSc vector in CEED vector
428a515125bSLeila Ghaffari   Vec               X_loc;
429a515125bSLeila Ghaffari   const PetscScalar *X_loc_array;
430a515125bSLeila Ghaffari   ierr = DMGetCoordinatesLocal(dm, &X_loc); CHKERRQ(ierr);
43105a512bdSLeila Ghaffari   ierr = VecScale(X_loc, problem->dm_scale); CHKERRQ(ierr);
432a515125bSLeila Ghaffari   ierr = VecGetArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr);
433a515125bSLeila Ghaffari   CeedVectorSetArray(ceed_data->x_coord, CEED_MEM_HOST, CEED_COPY_VALUES,
434a515125bSLeila Ghaffari                      (PetscScalar *)X_loc_array);
435a515125bSLeila Ghaffari   ierr = VecRestoreArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr);
436a515125bSLeila Ghaffari 
437a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
438a515125bSLeila Ghaffari   // CEED vectors
439a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
440a515125bSLeila Ghaffari   // -- Create CEED vector for geometric data
441a515125bSLeila Ghaffari   CeedInt  num_qpts_vol;
442a515125bSLeila Ghaffari   PetscInt loc_num_elem_vol;
443a515125bSLeila Ghaffari   CeedBasisGetNumQuadraturePoints(ceed_data->basis_q, &num_qpts_vol);
444a515125bSLeila Ghaffari   CeedElemRestrictionGetNumElements(ceed_data->elem_restr_q, &loc_num_elem_vol);
445a515125bSLeila Ghaffari   CeedVectorCreate(ceed, q_data_size_vol*loc_num_elem_vol*num_qpts_vol,
446a515125bSLeila Ghaffari                    &ceed_data->q_data);
447a515125bSLeila Ghaffari 
448752f40e3SJed Brown   CeedElemRestrictionCreateVector(elem_restr_jd_i, &jac_data, NULL);
449a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
450a515125bSLeila Ghaffari   // CEED Operators
451a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
452a515125bSLeila Ghaffari   // -- Create CEED operator for quadrature data
453a515125bSLeila Ghaffari   CeedOperatorCreate(ceed, ceed_data->qf_setup_vol, NULL, NULL,
454a515125bSLeila Ghaffari                      &ceed_data->op_setup_vol);
455a515125bSLeila Ghaffari   CeedOperatorSetField(ceed_data->op_setup_vol, "dx", ceed_data->elem_restr_x,
456a515125bSLeila Ghaffari                        ceed_data->basis_x, CEED_VECTOR_ACTIVE);
457a515125bSLeila Ghaffari   CeedOperatorSetField(ceed_data->op_setup_vol, "weight",
458139613f2SLeila Ghaffari                        CEED_ELEMRESTRICTION_NONE, ceed_data->basis_x, CEED_VECTOR_NONE);
4593b1e209bSJeremy L Thompson   CeedOperatorSetField(ceed_data->op_setup_vol, "qdata",
460139613f2SLeila Ghaffari                        ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE);
461a515125bSLeila Ghaffari 
462a515125bSLeila Ghaffari   // -- Create CEED operator for ICs
463a515125bSLeila Ghaffari   CeedOperatorCreate(ceed, ceed_data->qf_ics, NULL, NULL, &ceed_data->op_ics);
464a515125bSLeila Ghaffari   CeedOperatorSetField(ceed_data->op_ics, "x", ceed_data->elem_restr_x,
465a515125bSLeila Ghaffari                        ceed_data->basis_xc, CEED_VECTOR_ACTIVE);
466a515125bSLeila Ghaffari   CeedOperatorSetField(ceed_data->op_ics, "q0", ceed_data->elem_restr_q,
467a515125bSLeila Ghaffari                        CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE);
46815a3537eSJed Brown   CeedOperatorContextGetFieldLabel(ceed_data->op_ics, "evaluation time",
46915a3537eSJed Brown                                    &user->phys->ics_time_label);
470a515125bSLeila Ghaffari 
471a515125bSLeila Ghaffari   // Create CEED operator for RHS
472a515125bSLeila Ghaffari   if (ceed_data->qf_rhs_vol) {
473a515125bSLeila Ghaffari     CeedOperator op;
474a515125bSLeila Ghaffari     CeedOperatorCreate(ceed, ceed_data->qf_rhs_vol, NULL, NULL, &op);
475a515125bSLeila Ghaffari     CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q,
476a515125bSLeila Ghaffari                          CEED_VECTOR_ACTIVE);
477752f40e3SJed Brown     CeedOperatorSetField(op, "Grad_q", ceed_data->elem_restr_q, ceed_data->basis_q,
478a515125bSLeila Ghaffari                          CEED_VECTOR_ACTIVE);
4793b1e209bSJeremy L Thompson     CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i,
480139613f2SLeila Ghaffari                          CEED_BASIS_COLLOCATED, ceed_data->q_data);
481a515125bSLeila Ghaffari     CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x,
482a515125bSLeila Ghaffari                          ceed_data->x_coord);
483a515125bSLeila Ghaffari     CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q,
484a515125bSLeila Ghaffari                          CEED_VECTOR_ACTIVE);
485752f40e3SJed Brown     CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q,
486a515125bSLeila Ghaffari                          CEED_VECTOR_ACTIVE);
487a515125bSLeila Ghaffari     user->op_rhs_vol = op;
488a515125bSLeila Ghaffari   }
489a515125bSLeila Ghaffari 
490a515125bSLeila Ghaffari   // -- CEED operator for IFunction
491a515125bSLeila Ghaffari   if (ceed_data->qf_ifunction_vol) {
492a515125bSLeila Ghaffari     CeedOperator op;
493a515125bSLeila Ghaffari     CeedOperatorCreate(ceed, ceed_data->qf_ifunction_vol, NULL, NULL, &op);
494a515125bSLeila Ghaffari     CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q,
495a515125bSLeila Ghaffari                          CEED_VECTOR_ACTIVE);
496752f40e3SJed Brown     CeedOperatorSetField(op, "Grad_q", ceed_data->elem_restr_q, ceed_data->basis_q,
497a515125bSLeila Ghaffari                          CEED_VECTOR_ACTIVE);
4983b1e209bSJeremy L Thompson     CeedOperatorSetField(op, "q dot", ceed_data->elem_restr_q, ceed_data->basis_q,
499a515125bSLeila Ghaffari                          user->q_dot_ceed);
5003b1e209bSJeremy L Thompson     CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i,
501139613f2SLeila Ghaffari                          CEED_BASIS_COLLOCATED, ceed_data->q_data);
502a515125bSLeila Ghaffari     CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x,
503a515125bSLeila Ghaffari                          ceed_data->x_coord);
504a515125bSLeila Ghaffari     CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q,
505a515125bSLeila Ghaffari                          CEED_VECTOR_ACTIVE);
506752f40e3SJed Brown     CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q,
507a515125bSLeila Ghaffari                          CEED_VECTOR_ACTIVE);
508752f40e3SJed Brown     CeedOperatorSetField(op, "jac_data", elem_restr_jd_i,
509752f40e3SJed Brown                          CEED_BASIS_COLLOCATED, jac_data);
510752f40e3SJed Brown 
511a515125bSLeila Ghaffari     user->op_ifunction_vol = op;
512a515125bSLeila Ghaffari   }
513a515125bSLeila Ghaffari 
514*f0b65372SJed Brown   CeedOperator op_ijacobian_vol = NULL;
515*f0b65372SJed Brown   if (qf_ijacobian_vol) {
516*f0b65372SJed Brown     CeedOperator op;
517*f0b65372SJed Brown     CeedOperatorCreate(ceed, qf_ijacobian_vol, NULL, NULL, &op);
518*f0b65372SJed Brown     CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q,
519*f0b65372SJed Brown                          CEED_VECTOR_ACTIVE);
520*f0b65372SJed Brown     CeedOperatorSetField(op, "Grad_dq", ceed_data->elem_restr_q, ceed_data->basis_q,
521*f0b65372SJed Brown                          CEED_VECTOR_ACTIVE);
522*f0b65372SJed Brown     CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i,
523*f0b65372SJed Brown                          CEED_BASIS_COLLOCATED, ceed_data->q_data);
524*f0b65372SJed Brown     CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x,
525*f0b65372SJed Brown                          ceed_data->x_coord);
526*f0b65372SJed Brown     CeedOperatorSetField(op, "jac_data", elem_restr_jd_i,
527*f0b65372SJed Brown                          CEED_BASIS_COLLOCATED, jac_data);
528*f0b65372SJed Brown     CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q,
529*f0b65372SJed Brown                          CEED_VECTOR_ACTIVE);
530*f0b65372SJed Brown     CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q,
531*f0b65372SJed Brown                          CEED_VECTOR_ACTIVE);
532*f0b65372SJed Brown     op_ijacobian_vol = op;
533*f0b65372SJed Brown     CeedQFunctionDestroy(&qf_ijacobian_vol);
534*f0b65372SJed Brown   }
535*f0b65372SJed Brown 
536a515125bSLeila Ghaffari   // *****************************************************************************
537a515125bSLeila Ghaffari   // Set up CEED objects for the exterior domain (surface)
538a515125bSLeila Ghaffari   // *****************************************************************************
539a515125bSLeila Ghaffari   CeedInt height  = 1,
540a515125bSLeila Ghaffari           dim_sur = dim - height,
541a515125bSLeila Ghaffari           P_sur   = app_ctx->degree + 1,
542a515125bSLeila Ghaffari           Q_sur   = P_sur + app_ctx->q_extra;
543*f0b65372SJed Brown   const CeedInt q_data_size_sur = problem->q_data_size_sur,
544*f0b65372SJed Brown                 jac_data_size_sur = problem->jac_data_size_sur;
545a515125bSLeila Ghaffari 
546a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
547a515125bSLeila Ghaffari   // CEED Bases
548a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
549a515125bSLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_q, P_sur, Q_sur,
550a515125bSLeila Ghaffari                                   CEED_GAUSS, &ceed_data->basis_q_sur);
551a515125bSLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_x, 2, Q_sur, CEED_GAUSS,
552a515125bSLeila Ghaffari                                   &ceed_data->basis_x_sur);
553a515125bSLeila Ghaffari 
554a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
555a515125bSLeila Ghaffari   // CEED QFunctions
556a515125bSLeila Ghaffari   // -----------------------------------------------------------------------------
557a515125bSLeila Ghaffari   // -- Create QFunction for quadrature data
5589785fe93SJed Brown   CeedQFunctionCreateInterior(ceed, 1, problem->setup_sur.qfunction,
5599785fe93SJed Brown                               problem->setup_sur.qfunction_loc,
560a515125bSLeila Ghaffari                               &ceed_data->qf_setup_sur);
56115a3537eSJed Brown   if (problem->setup_sur.qfunction_context) {
56215a3537eSJed Brown     CeedQFunctionSetContext(ceed_data->qf_setup_sur,
56315a3537eSJed Brown                             problem->setup_sur.qfunction_context);
56415a3537eSJed Brown     CeedQFunctionContextDestroy(&problem->setup_sur.qfunction_context);
56515a3537eSJed Brown   }
566a515125bSLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_setup_sur, "dx", num_comp_x*dim_sur,
567a515125bSLeila Ghaffari                         CEED_EVAL_GRAD);
568a515125bSLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_setup_sur, "weight", 1, CEED_EVAL_WEIGHT);
5693b1e209bSJeremy L Thompson   CeedQFunctionAddOutput(ceed_data->qf_setup_sur, "surface qdata",
570002797a3SLeila Ghaffari                          q_data_size_sur, CEED_EVAL_NONE);
571a515125bSLeila Ghaffari 
572002797a3SLeila Ghaffari   // -- Creat QFunction for inflow boundaries
5739785fe93SJed Brown   if (problem->apply_inflow.qfunction) {
5749785fe93SJed Brown     CeedQFunctionCreateInterior(ceed, 1, problem->apply_inflow.qfunction,
5759785fe93SJed Brown                                 problem->apply_inflow.qfunction_loc, &ceed_data->qf_apply_inflow);
57615a3537eSJed Brown     CeedQFunctionSetContext(ceed_data->qf_apply_inflow,
57715a3537eSJed Brown                             problem->apply_inflow.qfunction_context);
57815a3537eSJed Brown     CeedQFunctionContextDestroy(&problem->apply_inflow.qfunction_context);
579002797a3SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "q", num_comp_q,
580a515125bSLeila Ghaffari                           CEED_EVAL_INTERP);
581002797a3SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "surface qdata",
582002797a3SLeila Ghaffari                           q_data_size_sur, CEED_EVAL_NONE);
583002797a3SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "x", num_comp_x,
584a515125bSLeila Ghaffari                           CEED_EVAL_INTERP);
585002797a3SLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_apply_inflow, "v", num_comp_q,
586002797a3SLeila Ghaffari                            CEED_EVAL_INTERP);
587002797a3SLeila Ghaffari   }
588*f0b65372SJed Brown   if (problem->apply_inflow_jacobian.qfunction) {
589*f0b65372SJed Brown     CeedQFunctionCreateInterior(ceed, 1, problem->apply_inflow_jacobian.qfunction,
590*f0b65372SJed Brown                                 problem->apply_inflow_jacobian.qfunction_loc,
591*f0b65372SJed Brown                                 &ceed_data->qf_apply_inflow_jacobian);
592*f0b65372SJed Brown     CeedQFunctionSetContext(ceed_data->qf_apply_inflow_jacobian,
593*f0b65372SJed Brown                             problem->apply_inflow_jacobian.qfunction_context);
594*f0b65372SJed Brown     CeedQFunctionContextDestroy(&problem->apply_inflow_jacobian.qfunction_context);
595*f0b65372SJed Brown     CeedQFunctionAddInput(ceed_data->qf_apply_inflow_jacobian, "dq", num_comp_q,
596*f0b65372SJed Brown                           CEED_EVAL_INTERP);
597*f0b65372SJed Brown     CeedQFunctionAddInput(ceed_data->qf_apply_inflow_jacobian, "surface qdata",
598*f0b65372SJed Brown                           q_data_size_sur, CEED_EVAL_NONE);
599*f0b65372SJed Brown     CeedQFunctionAddInput(ceed_data->qf_apply_inflow_jacobian, "x", num_comp_x,
600*f0b65372SJed Brown                           CEED_EVAL_INTERP);
601*f0b65372SJed Brown     CeedQFunctionAddOutput(ceed_data->qf_apply_inflow_jacobian, "v", num_comp_q,
602*f0b65372SJed Brown                            CEED_EVAL_INTERP);
603*f0b65372SJed Brown   }
604002797a3SLeila Ghaffari 
605002797a3SLeila Ghaffari   // -- Creat QFunction for outflow boundaries
6069785fe93SJed Brown   if (problem->apply_outflow.qfunction) {
6079785fe93SJed Brown     CeedQFunctionCreateInterior(ceed, 1, problem->apply_outflow.qfunction,
6089785fe93SJed Brown                                 problem->apply_outflow.qfunction_loc, &ceed_data->qf_apply_outflow);
60915a3537eSJed Brown     CeedQFunctionSetContext(ceed_data->qf_apply_outflow,
61015a3537eSJed Brown                             problem->apply_outflow.qfunction_context);
61115a3537eSJed Brown     CeedQFunctionContextDestroy(&problem->apply_outflow.qfunction_context);
612002797a3SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "q", num_comp_q,
613002797a3SLeila Ghaffari                           CEED_EVAL_INTERP);
614002797a3SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "surface qdata",
615002797a3SLeila Ghaffari                           q_data_size_sur, CEED_EVAL_NONE);
616002797a3SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "x", num_comp_x,
617002797a3SLeila Ghaffari                           CEED_EVAL_INTERP);
618002797a3SLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_apply_outflow, "v", num_comp_q,
619a515125bSLeila Ghaffari                            CEED_EVAL_INTERP);
620*f0b65372SJed Brown     CeedQFunctionAddOutput(ceed_data->qf_apply_outflow, "surface jacobian data",
621*f0b65372SJed Brown                            jac_data_size_sur,
622*f0b65372SJed Brown                            CEED_EVAL_NONE);
623*f0b65372SJed Brown   }
624*f0b65372SJed Brown   if (problem->apply_outflow_jacobian.qfunction) {
625*f0b65372SJed Brown     CeedQFunctionCreateInterior(ceed, 1, problem->apply_outflow_jacobian.qfunction,
626*f0b65372SJed Brown                                 problem->apply_outflow_jacobian.qfunction_loc,
627*f0b65372SJed Brown                                 &ceed_data->qf_apply_outflow_jacobian);
628*f0b65372SJed Brown     CeedQFunctionSetContext(ceed_data->qf_apply_outflow_jacobian,
629*f0b65372SJed Brown                             problem->apply_outflow_jacobian.qfunction_context);
630*f0b65372SJed Brown     CeedQFunctionContextDestroy(&problem->apply_outflow_jacobian.qfunction_context);
631*f0b65372SJed Brown     CeedQFunctionAddInput(ceed_data->qf_apply_outflow_jacobian, "dq", num_comp_q,
632*f0b65372SJed Brown                           CEED_EVAL_INTERP);
633*f0b65372SJed Brown     CeedQFunctionAddInput(ceed_data->qf_apply_outflow_jacobian, "surface qdata",
634*f0b65372SJed Brown                           q_data_size_sur, CEED_EVAL_NONE);
635*f0b65372SJed Brown     CeedQFunctionAddInput(ceed_data->qf_apply_outflow_jacobian,
636*f0b65372SJed Brown                           "surface jacobian data",
637*f0b65372SJed Brown                           jac_data_size_sur, CEED_EVAL_NONE);
638*f0b65372SJed Brown     CeedQFunctionAddOutput(ceed_data->qf_apply_outflow_jacobian, "v", num_comp_q,
639*f0b65372SJed Brown                            CEED_EVAL_INTERP);
640a515125bSLeila Ghaffari   }
641a515125bSLeila Ghaffari 
642a515125bSLeila Ghaffari   // *****************************************************************************
643a515125bSLeila Ghaffari   // CEED Operator Apply
644a515125bSLeila Ghaffari   // *****************************************************************************
645a515125bSLeila Ghaffari   // -- Apply CEED Operator for the geometric data
646a515125bSLeila Ghaffari   CeedOperatorApply(ceed_data->op_setup_vol, ceed_data->x_coord,
647a515125bSLeila Ghaffari                     ceed_data->q_data, CEED_REQUEST_IMMEDIATE);
648a515125bSLeila Ghaffari 
649a515125bSLeila Ghaffari   // -- Create and apply CEED Composite Operator for the entire domain
650a515125bSLeila Ghaffari   if (!user->phys->implicit) { // RHS
651a515125bSLeila Ghaffari     ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys,
652*f0b65372SJed Brown                                    user->op_rhs_vol, NULL, height, P_sur, Q_sur,
653*f0b65372SJed Brown                                    q_data_size_sur, 0,
654*f0b65372SJed Brown                                    &user->op_rhs, NULL); CHKERRQ(ierr);
655a515125bSLeila Ghaffari   } else { // IFunction
656a515125bSLeila Ghaffari     ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys,
657*f0b65372SJed Brown                                    user->op_ifunction_vol, op_ijacobian_vol,
658*f0b65372SJed Brown                                    height, P_sur, Q_sur,
659*f0b65372SJed Brown                                    q_data_size_sur, jac_data_size_sur,
660*f0b65372SJed Brown                                    &user->op_ifunction,
661*f0b65372SJed Brown                                    op_ijacobian_vol ? &user->op_ijacobian : NULL); CHKERRQ(ierr);
662*f0b65372SJed Brown     if (user->op_ijacobian) {
663*f0b65372SJed Brown       CeedOperatorContextGetFieldLabel(user->op_ijacobian, "ijacobian time shift",
664*f0b65372SJed Brown                                        &user->phys->ijacobian_time_shift_label);
665*f0b65372SJed Brown     }
666*f0b65372SJed Brown 
667a515125bSLeila Ghaffari   }
668752f40e3SJed Brown   CeedElemRestrictionDestroy(&elem_restr_jd_i);
669752f40e3SJed Brown   CeedVectorDestroy(&jac_data);
670a515125bSLeila Ghaffari   PetscFunctionReturn(0);
671a515125bSLeila Ghaffari }
672