1bcb2dfaeSJed Brown# Changes/Release Notes 2bcb2dfaeSJed Brown 3f374d6a3SJeremy L ThompsonOn this page we provide a summary of the main API changes, new features and examples for each release of libCEED. 4bcb2dfaeSJed Brown 5bcb2dfaeSJed Brown(main)= 6bcb2dfaeSJed Brown 7bcb2dfaeSJed Brown## Current `main` branch 8bcb2dfaeSJed Brown 9ca567da4SJeremy L Thompson### Interface changes 10ca567da4SJeremy L Thompson 115b6ec284SJeremy L Thompson- Add `bool` field type for `CeedQFunctionContext` and related interfaces to use `bool` fields. 12a36217cbSJeremy L Thompson- `CEED_BASIS_COLLOCATED` removed; users should only use `CEED_BASIS_NONE`. 1362c1cb2aSJeremy L Thompson- Remove unneeded pointer for `CeedElemRestrictionGetELayout`. 14f6c445a1SJames Wright- Change QFunction source include file handling in JiT compilers 15f6c445a1SJames Wright - Add `CEED_RUNNING_JIT_PASS` compiler definition for wrapping header files that device JiT compilers cannot read 16f6c445a1SJames Wright - Users should now prefer `#include <ceed/types.h>` rather than `#include <ceed.h>` in QFunction source files 17dc3318a4SJeremy L Thompson- Require use of `Ceed*Destroy()` on Ceed objects returned from `Ceed*Get*()`. 18ed094490SJeremy L Thompson- Rename `CeedCompositeOperatorCreate()` to `CeedOperatorCreateComposite()` for uniformity. 19ed094490SJeremy L Thompson- Rename `CeedCompositeOperator*()` to `CeedOperatorComposite*()` for uniformity. 205b6ec284SJeremy L Thompson 214018a20aSJeremy L Thompson### New features 224018a20aSJeremy L Thompson 2348acf710SJeremy L Thompson- Add `CeedOperatorCreateAtPoints` which evaluates the `CeedQFunction` at arbitrary locations in each element, for use in Particle in Cell, Material Point Method, and similar methods. 2462c1cb2aSJeremy L Thompson- Add `CeedElemRestrictionGetLLayout` to provide L-vector layout for strided `CeedElemRestriction` created with `CEED_BACKEND_STRIDES`. 256e536b99SJeremy L Thompson- Add `CeedVectorReturnCeed` and similar when parent `Ceed` context for a libCEED object is only needed once in a calling scope. 26101cc02cSJeremy L Thompson- Enable `#pragma once` for all JiT source; remove duplicate includes in JiT source string before compilation. 274753b775SJeremy L Thompson- Allow user to set additional compiler options for CUDA and HIP JiT. 284753b775SJeremy L ThompsonSpecifically, directories set with `CeedAddJitSourceRoot(ceed, "foo/bar")` will be used to set `-Ifoo/bar` and defines set with `CeedAddJitDefine(ceed, "foo=bar")` will be used to set `-Dfoo=bar`. 29da5de306SJeremy L Thompson- Added non-tensor basis support to code generation backends `/gpu/cuda/gen` and `/gpu/hip/gen`. 308b89f79dSJeremy L Thompson- Added support to code generation backends `/gpu/cuda/gen` and `/gpu/hip/gen` for operators with both tensor and non-tensor bases. 314f69910bSJed Brown- Add `CeedGetGitVersion()` to access the Git commit and dirty state of the repository at build time. 324f69910bSJed Brown- Add `CeedGetBuildConfiguration()` to access compilers, flags, and related information about the build environment. 3348acf710SJeremy L Thompson 344018a20aSJeremy L Thompson### Examples 354018a20aSJeremy L Thompson 36a745612cSJeremy L Thompson- Add deal.II example with CEED BP suite. 37a745612cSJeremy L Thompson 38*346c77e6SJeremy L Thompson### Maintainability 39*346c77e6SJeremy L Thompson 40*346c77e6SJeremy L Thompson- OCCA backends were retired. 41*346c77e6SJeremy L Thompson 424018a20aSJeremy L Thompson(v0-12)= 434018a20aSJeremy L Thompson 444018a20aSJeremy L Thompson## v0.12 (Oct 31, 2023) 454018a20aSJeremy L Thompson 464018a20aSJeremy L Thompson### Interface changes 474018a20aSJeremy L Thompson 48ca567da4SJeremy L Thompson- Update `CeedOperatorContext*` functions to `CeedOperator*Context*` functions for consistency. 49ca567da4SJeremy L ThompsonFor example, `CeedOperatorContextGetFieldLabel` was renamed to `CeedOperatorGetContextFieldLabel`. 5037eda346SJeremy L Thompson- Removed `CeedBasisSetNumQuadraturePoints` as redundant and bug-prone interface. 51ca567da4SJeremy L Thompson 52de5900adSJames Wright### New features 53ca567da4SJeremy L Thompson 54b8c4711aSSebastian Grimberg- Added {c:func}`CeedOperatorGetFieldByName` to access a specific `CeedOperatorField` by its name. 55ca567da4SJeremy L Thompson- Update `/cpu/self/memcheck/*` backends to help verify `CeedVector` array access assumptions and `CeedQFunction` user output assumptions. 56ca567da4SJeremy L Thompson- Update {c:func}`CeedOperatorLinearAssembleDiagonal` to provide default implementation that supports `CeedOperator` with multiple active bases. 574018a20aSJeremy L Thompson- Added Sycl backends `/gpu/sycl/ref`, `/gpu/sycl/shared`, and `/gpu/sycl/gen`. 58ac5aa7bcSJeremy L Thompson- Added {c:func}`CeedBasisApplyAtPoints` for evaluation of values and derivatives at arbitrary points inside elements. 59b8c4711aSSebastian Grimberg- Added support for non-tensor $H(\text{curl})$ finite element spaces with {c:func}`CeedBasisCreateHcurl`. 60b8c4711aSSebastian Grimberg- Added {c:func}`CeedElemRestrictionCreateCurlOriented`, similar to {c:func}`CeedElemRestrictionCreateOriented`, for element restrictions requiring more general element transformations such as those for high-order $H(\text{curl})$ spaces on tetrahedra (see [https://dl.acm.org/doi/pdf/10.1145/3524456](https://dl.acm.org/doi/pdf/10.1145/3524456)). 6158c07c4fSSebastian Grimberg- Added {c:func}`CeedOperatorLinearAssemblePointBlockDiagonalSymbolic` to create COO mapping for mapping out of {c:func}`CeedOperatorLinearAssemblePointBlockDiagonal`. 6258c07c4fSSebastian Grimberg- Added support for application codes which manage multiple {ref}`Ceed` objects, parallelized across OpenMP threads. 63de5900adSJames Wright 64baf96a30SJames Wright### Examples 65baf96a30SJames Wright 664018a20aSJeremy L Thompson- Add `DMSwarm` example demonstrating interpolation from background mesh to swarm points and projection from swarm points to background mesh. 674018a20aSJeremy L Thompson 68baf96a30SJames Wright#### {ref}`example-petsc-bps` 69baf96a30SJames Wright 70b8c4711aSSebastian Grimberg- Requires PETSc version 3.19 or later. 71baf96a30SJames Wright 724018a20aSJeremy L Thompson#### {ref}`example-petsc-navier-stokes` 734018a20aSJeremy L Thompson 744018a20aSJeremy L Thompson- Updated restart and checkpointing interface. 754018a20aSJeremy L Thompson- Add data-driven subgrid-stress model. 764018a20aSJeremy L Thompson- Add differential filtering of solution. 774018a20aSJeremy L Thompson- Add turbulence statistics collection over spanwise-symmetric geometries. 784018a20aSJeremy L Thompson- Add Taylor-Green vortex initial condition. 794018a20aSJeremy L Thompson- Add Riemann-based outflow boundary conditions. 804018a20aSJeremy L Thompson- Added vortex shedding and flow past cylinder example, including calculations for lift, drag, and heat transfer. 814018a20aSJeremy L Thompson- Add Internal Damping Layer (IDL) for helping turbulent simulation stability. 824018a20aSJeremy L Thompson- Derive `CeedBasis` from `PetscFE`, and various other internal maintainability updates. 834018a20aSJeremy L Thompson 848ec64e9aSJed Brown(v0-11)= 858ec64e9aSJed Brown 868ec64e9aSJed Brown## v0.11 (Dec 24, 2022) 878ec64e9aSJed Brown 887e7773b5SJeremy L Thompson### Interface changes 897e7773b5SJeremy L Thompson 90ea6b5821SJeremy L Thompson- Added {c:func}`CeedOperatorSetName` for more readable {c:func}`CeedOperatorView` output. 91f113e5dcSJeremy L Thompson- Added {c:func}`CeedBasisCreateProjection` to facilitate interpolation between nodes for separate `CeedBases`. 92a00f0c56SJeremy L Thompson- Rename and move {c:func}`CeedCompositeOperatorGetNumSub` and {c:func}`CeedCompositeOperatorGetSubList` to public interface. 93356036faSJeremy L Thompson- Renamed `CEED_BASIS_COLLOCATED` to `CEED_BASIS_NONE` for clarity. 943384518aSJeremy L ThompsonSome users previously misinterpreted a `CeedOperator` field using `CEED_BASIS_COLLOCATED` as meaning that the entire `CeedOperator` used a quadrature space that is collocated with the nodal space of the active bases. 95ea6b5821SJeremy L Thompson 960f58c348SJeremy L Thompson### New features 976cccb8e4SJeremy L Thompson 980f58c348SJeremy L Thompson- Update `/cpu/self/memcheck/*` backends to help verify `CeedQFunctionContext` data sizes provided by user. 998ec64e9aSJed Brown- Improved support for $H(\text{div})$ bases. 100de5900adSJames Wright- Added `CeedInt_FMT` to support potential future use of larger integer sizes. 1018ec64e9aSJed Brown- Added `CEED_QFUNCTION_ATTR` for setting compiler attributes/pragmas to `CEED_QFUNCTION_HELPER` and `CEED_QFUNCTION`. 1020be03a92SJeremy L Thompson- OCCA backend updated to latest OCCA release; DPC++ and OMP OCCA modes enabled. 1030be03a92SJeremy L ThompsonDue to a limitation of the OCCA parser, typedefs are required to use pointers to arrays in QFunctions with the OCCA backend. 1040be03a92SJeremy L ThompsonThis issue will be fixed in a future OCCA release. 1050f58c348SJeremy L Thompson 10644d7a66cSJeremy L Thompson### Bugfix 10744d7a66cSJeremy L Thompson 108f113e5dcSJeremy L Thompson- Fix bug in setting device id for GPU backends. 10944d7a66cSJeremy L Thompson- Fix storing of indices for `CeedElemRestriction` on the host with GPU backends. 1107b63f5c6SJed Brown- Fix `CeedElemRestriction` sizing for {c:func}`CeedOperatorAssemblePointBlockDiagonal`. 1116cccb8e4SJeremy L Thompson- Fix bugs in CPU implementation of {c:func}`CeedOperatorLinearAssemble` when there are different number of active input modes and active output modes. 1126cccb8e4SJeremy L Thompson 113e0e35436SJeremy L Thompson### Examples 114e0e35436SJeremy L Thompson 1158ec64e9aSJed Brown#### {ref}`example-petsc-navier-stokes` 1168ec64e9aSJed Brown 1178ec64e9aSJed Brown- Various performance enhancements, analytic matrix-free and assembled Jacobian, and PETSc solver configurations for GPUs. 1188ec64e9aSJed Brown- Refactored to improve code reuse and modularity. 1198ec64e9aSJed Brown- Support for primitive variables for more accurate boundary layers and all-speed flow. 1208ec64e9aSJed Brown- Added $YZ\beta$ shock capturing scheme and Shock Tube example. 1218ec64e9aSJed Brown- Added Channel example, with comparison to analytic solutions. 1228ec64e9aSJed Brown- Added Flat Plate with boundary layer mesh and compressible Blasius inflow condition based on Chebyshev collocation solution of the Blasius equations. 1238ec64e9aSJed Brown- Added strong and weak synthetic turbulence generation (STG) inflow boundary conditions. 1248ec64e9aSJed Brown- Added "freestream" boundary conditions based on HLLC Riemann solver. 1258ec64e9aSJed Brown- Automated stabilization coefficients for different basis degree. 1268ec64e9aSJed Brown 1278ec64e9aSJed Brown#### {ref}`example-petsc-bps` 1288ec64e9aSJed Brown 1298ec64e9aSJed Brown- Support for convergence studies. 130e0e35436SJeremy L Thompson 1319e201c85SYohann### Maintainability 1329e201c85SYohann 1339e201c85SYohann- Refactored `/gpu/cuda/shared` and `/gpu/cuda/gen` as well as `/gpu/hip/shared` and `/gpu/hip/gen` backend to improve maintainablity and reduce duplicated code. 1349e201c85SYohann- Enabled support for `p > 8` for `/gpu/*/shared` backends. 1358ec64e9aSJed Brown- Switch to `clang-format` over `astyle` for automatic formatting; Makefile command changed to `make format` from `make style`. 1368ec64e9aSJed Brown- Improved test harness. 1379e201c85SYohann 138f374d6a3SJeremy L Thompson(v0-10-1)= 139f374d6a3SJeremy L Thompson 140f374d6a3SJeremy L Thompson## v0.10.1 (Apr 11, 2022) 141f374d6a3SJeremy L Thompson 142f374d6a3SJeremy L Thompson### Interface changes 143f374d6a3SJeremy L Thompson 1446e15d496SJeremy L Thompson- Added {c:func}`CeedQFunctionSetUserFlopsEstimate` and {c:func}`CeedOperatorGetFlopsEstimate` to facilitate estimating FLOPs in operator application. 1456e15d496SJeremy L Thompson 146b3271f73Snbeams### New features 147b3271f73Snbeams 148b3271f73Snbeams- Switched MAGMA backends to use runtime compilation for tensor basis kernels (and element restriction kernels, in non-deterministic `/gpu/*/magma` backends). 149b3271f73SnbeamsThis reduces time to compile the library and increases the range of parameters for which the MAGMA tensor basis kernels will work. 150b3271f73Snbeams 1515766aa57SJeremy L Thompson### Bugfix 1525766aa57SJeremy L Thompson 1535766aa57SJeremy L Thompson- Install JiT source files in install directory to fix GPU functionality for installed libCEED. 1545766aa57SJeremy L Thompson 155667e613fSJeremy L Thompson(v0-10)= 156667e613fSJeremy L Thompson 1573ed90579SJeremy L Thompson## v0.10 (Mar 21, 2022) 158667e613fSJeremy L Thompson 159667e613fSJeremy L Thompson### Interface changes 160667e613fSJeremy L Thompson 1617e7773b5SJeremy L Thompson- Update {c:func}`CeedQFunctionGetFields` and {c:func}`CeedOperatorGetFields` to include number of fields. 162ce4822f6SJeremy L Thompson- Promote to the public API: QFunction and Operator field objects, `CeedQFunctionField` and `CeedOperatorField`, and associated getters, {c:func}`CeedQFunctionGetFields`; {c:func}`CeedQFunctionFieldGetName`; {c:func}`CeedQFunctionFieldGetSize`; {c:func}`CeedQFunctionFieldGetEvalMode`; {c:func}`CeedOperatorGetFields`; {c:func}`CeedOperatorFieldGetElemRestriction`; {c:func}`CeedOperatorFieldGetBasis`; and {c:func}`CeedOperatorFieldGetVector`. 163f04ea552SJeremy L Thompson- Clarify and document conditions where `CeedQFunction` and `CeedOperator` become immutable and no further fields or suboperators can be added. 16470a7ffb3SJeremy L Thompson- Add {c:func}`CeedOperatorLinearAssembleQFunctionBuildOrUpdate` to reduce object creation overhead in assembly of CeedOperator preconditioning ingredients. 1654db537f9SJeremy L Thompson- Promote {c:func}`CeedOperatorCheckReady`to the public API to facilitate interactive interfaces. 166dcc1e3ecSJeremy L Thompson- Warning added when compiling OCCA backend to alert users that this backend is experimental. 1679a1d3511SJeremy L Thompson- `ceed-backend.h`, `ceed-hash.h`, and `ceed-khash.h` removed. Users should use `ceed/backend.h`, `ceed/hash.h`, and `ceed/khash.h`. 16843e1b16fSJeremy L Thompson- Added {c:func}`CeedQFunctionGetKernelName`; refactored {c:func}`CeedQFunctionGetSourcePath` to exclude function kernel name. 1699c774eddSJeremy L Thompson- Clarify documentation for {c:func}`CeedVectorTakeArray`; this function will error if {c:func}`CeedVectorSetArray` with `copy_mode == CEED_USE_POINTER` was not previously called for the corresponding `CeedMemType`. 170ac5aa7bcSJeremy L Thompson- Added {c:func}`CeedVectorGetArrayWrite` that allows access to uninitialized arrays; require initialized data for {c:func}`CeedVectorGetArray`. 171c38440baSJed Brown- Added {c:func}`CeedQFunctionContextRegisterDouble` and {c:func}`CeedQFunctionContextRegisterInt32` with {c:func}`CeedQFunctionContextSetDouble` and {c:func}`CeedQFunctionContextSetInt32` to facilitate easy updating of {c:struct}`CeedQFunctionContext` data by user defined field names. 172ac5aa7bcSJeremy L Thompson- Added {c:func}`CeedQFunctionContextGetFieldDescriptions` to retrieve user defined descriptions of fields that are registered with `CeedQFunctionContextRegister*`. 1737a06ec9fSJeremy L Thompson- Renamed `CeedElemTopology` entries for clearer namespacing between libCEED enums. 174f4f98f9dSJeremy L Thompson- Added type `CeedSize` equivalent to `ptrdiff_t` for array sizes in {c:func}`CeedVectorCreate`, {c:func}`CeedVectorGetLength`, `CeedElemRestrictionCreate*`, {c:func}`CeedElemRestrictionGetLVectorSize`, and {c:func}`CeedOperatorLinearAssembleSymbolic`. This is a breaking change. 1758b919e6bSJeremy L Thompson- Added {c:func}`CeedOperatorSetQFunctionUpdated` to facilitate QFunction data re-use between operators sharing the same quadrature space, such as in a multigrid hierarchy. 176c9366a6bSJeremy L Thompson- Added {c:func}`CeedOperatorGetActiveVectorLengths` to get shape of CeedOperator. 1777e7773b5SJeremy L Thompson 178f479eb23SJeremy L Thompson### New features 179f479eb23SJeremy L Thompson 180f479eb23SJeremy L Thompson- `CeedScalar` can now be set as `float` or `double` at compile time. 18130601ac0SJeremy L Thompson- Added JiT utilities in `ceed/jit-tools.h` to reduce duplicated code in GPU backends. 182fb3c7d02SJeremy L Thompson- Added support for JiT of QFunctions with `#include "relative/path/local-file.h"` statements for additional local files. Note that files included with `""` are searched relative to the current file first, then by compiler paths (as with `<>` includes). To use this feature, one should adhere to relative paths only, not compiler flags like `-I`, which the JiT will not be aware of. 18323dfbf5bSJeremy L Thompson- Remove need to guard library headers in QFunction source for code generation backends. 1843f21f6b1SJeremy L Thompson- `CeedDebugEnv()` macro created to provide debugging outputs when Ceed context is not present. 185f7e22acaSJeremy L Thompson- Added {c:func}`CeedStringAllocCopy` to reduce repeated code for copying strings internally. 1863451974fSJeremy L Thompson- Added {c:func}`CeedPathConcatenate` to facilitate loading kernel source files with a path relative to the current file. 187b8c4711aSSebastian Grimberg- Added support for non-tensor $H(\text{div})$ elements, to include CPU backend implementations and {c:func}`CeedBasisCreateHdiv` convenience constructor. 188d34e270fSJeremy L Thompson- Added {c:func}`CeedQFunctionSetContextWritable` and read-only access to `CeedQFunctionContext` data as an optional feature to improve GPU performance. By default, calling the `CeedQFunctionUser` during {c:func}`CeedQFunctionApply` is assumed to write into the `CeedQFunctionContext` data, consistent with the previous behavior. Note that if a user asserts that their `CeedQFunctionUser` does not write into the `CeedQFunctionContext` data, they are responsible for the validity of this assertion. 18959ad764aSnbeams- Added support for element matrix assembly in GPU backends. 190f479eb23SJeremy L Thompson 191bcb2dfaeSJed Brown### Maintainability 192bcb2dfaeSJed Brown 193bcb2dfaeSJed Brown- Refactored preconditioner support internally to facilitate future development and improve GPU completeness/test coverage. 194db52d626SJeremy L Thompson- `Include-what-you-use` makefile target added as `make iwyu`. 195bf4cb664SJeremy L Thompson- Create backend constant `CEED_FIELD_MAX` to reduce magic numbers in codebase. 1963451974fSJeremy L Thompson- Put GPU JiTed kernel source code into separate files. 197f9996dfdSJeremy L Thompson- Dropped legacy version support in PETSc based examples to better utilize PETSc DMPlex and Mat updates to support libCEED; current minimum PETSc version for the examples is v3.17. 198bcb2dfaeSJed Brown 199bcb2dfaeSJed Brown(v0-9)= 200bcb2dfaeSJed Brown 201bcb2dfaeSJed Brown## v0.9 (Jul 6, 2021) 202bcb2dfaeSJed Brown 203bcb2dfaeSJed Brown### Interface changes 204bcb2dfaeSJed Brown 205bcb2dfaeSJed Brown- Minor modification in error handling macro to silence pedantic warnings when compiling with Clang, but no functional impact. 206bcb2dfaeSJed Brown 207bcb2dfaeSJed Brown### New features 208bcb2dfaeSJed Brown 209bcb2dfaeSJed Brown- Add {c:func}`CeedVectorAXPY` and {c:func}`CeedVectorPointwiseMult` as a convenience for stand-alone testing and internal use. 210bcb2dfaeSJed Brown- Add `CEED_QFUNCTION_HELPER` macro to properly annotate QFunction helper functions for code generation backends. 211bcb2dfaeSJed Brown- Add `CeedPragmaOptimizeOff` macro for code that is sensitive to floating point errors from fast math optimizations. 212bcb2dfaeSJed Brown- Rust support: split `libceed-sys` crate out of `libceed` and [publish both on crates.io](https://crates.io/crates/libceed). 213bcb2dfaeSJed Brown 214bcb2dfaeSJed Brown### Performance improvements 215bcb2dfaeSJed Brown 216bcb2dfaeSJed Brown### Examples 217bcb2dfaeSJed Brown 218bcb2dfaeSJed Brown- Solid mechanics mini-app updated to explore the performance impacts of various formulations in the initial and current configurations. 219bcb2dfaeSJed Brown- Fluid mechanics example adds GPU support and improves modularity. 220bcb2dfaeSJed Brown 221bcb2dfaeSJed Brown### Deprecated backends 222bcb2dfaeSJed Brown 223bcb2dfaeSJed Brown- The `/cpu/self/tmpl` and `/cpu/self/tmpl/sub` backends have been removed. These backends were intially added to test the backend inheritance mechanism, but this mechanism is now widely used and tested in multiple backends. 224bcb2dfaeSJed Brown 225bcb2dfaeSJed Brown(v0-8)= 226bcb2dfaeSJed Brown 227bcb2dfaeSJed Brown## v0.8 (Mar 31, 2021) 228bcb2dfaeSJed Brown 229bcb2dfaeSJed Brown### Interface changes 230bcb2dfaeSJed Brown 231bcb2dfaeSJed Brown- Error handling improved to include enumerated error codes for C interface return values. 232bcb2dfaeSJed Brown- Installed headers that will follow semantic versioning were moved to {code}`include/ceed` directory. These headers have been renamed from {code}`ceed-*.h` to {code}`ceed/*.h`. Placeholder headers with the old naming schema are currently provided, but these headers will be removed in the libCEED v0.9 release. 233bcb2dfaeSJed Brown 234bcb2dfaeSJed Brown### New features 235bcb2dfaeSJed Brown 236bcb2dfaeSJed Brown- Julia and Rust interfaces added, providing a nearly 1-1 correspondence with the C interface, plus some convenience features. 237bcb2dfaeSJed Brown- Static libraries can be built with `make STATIC=1` and the pkg-config file is installed accordingly. 238bcb2dfaeSJed Brown- Add {c:func}`CeedOperatorLinearAssembleSymbolic` and {c:func}`CeedOperatorLinearAssemble` to support full assembly of libCEED operators. 239bcb2dfaeSJed Brown 240bcb2dfaeSJed Brown### Performance improvements 241bcb2dfaeSJed Brown 242bcb2dfaeSJed Brown- New HIP MAGMA backends for hipMAGMA library users: `/gpu/hip/magma` and `/gpu/hip/magma/det`. 243bcb2dfaeSJed Brown- New HIP backends for improved tensor basis performance: `/gpu/hip/shared` and `/gpu/hip/gen`. 244bcb2dfaeSJed Brown 245bcb2dfaeSJed Brown### Examples 246bcb2dfaeSJed Brown 247bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with traction boundary conditions and improved Dirichlet boundary conditions. 248bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with Neo-Hookean hyperelasticity in current configuration as well as improved Neo-Hookean hyperelasticity exploring storage vs computation tradeoffs. 249bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` example updated with isentropic traveling vortex test case, an analytical solution to the Euler equations that is useful for testing boundary conditions, discretization stability, and order of accuracy. 250bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` example updated with support for performing convergence study and plotting order of convergence by polynomial degree. 251bcb2dfaeSJed Brown 252bcb2dfaeSJed Brown(v0-7)= 253bcb2dfaeSJed Brown 254bcb2dfaeSJed Brown## v0.7 (Sep 29, 2020) 255bcb2dfaeSJed Brown 256bcb2dfaeSJed Brown### Interface changes 257bcb2dfaeSJed Brown 258bcb2dfaeSJed Brown- Replace limited {code}`CeedInterlaceMode` with more flexible component stride {code}`compstride` in {code}`CeedElemRestriction` constructors. 259bcb2dfaeSJed Brown As a result, the {code}`indices` parameter has been replaced with {code}`offsets` and the {code}`nnodes` parameter has been replaced with {code}`lsize`. 260bcb2dfaeSJed Brown These changes improve support for mixed finite element methods. 261bcb2dfaeSJed Brown- Replace various uses of {code}`Ceed*Get*Status` with {code}`Ceed*Is*` in the backend API to match common nomenclature. 262bcb2dfaeSJed Brown- Replace {code}`CeedOperatorAssembleLinearDiagonal` with {c:func}`CeedOperatorLinearAssembleDiagonal` for clarity. 263bcb2dfaeSJed Brown- Linear Operators can be assembled as point-block diagonal matrices with {c:func}`CeedOperatorLinearAssemblePointBlockDiagonal`, provided in row-major form in a {code}`ncomp` by {code}`ncomp` block per node. 264bcb2dfaeSJed Brown- Diagonal assemble interface changed to accept a {ref}`CeedVector` instead of a pointer to a {ref}`CeedVector` to reduce memory movement when interfacing with calling code. 265bcb2dfaeSJed Brown- Added {c:func}`CeedOperatorLinearAssembleAddDiagonal` and {c:func}`CeedOperatorLinearAssembleAddPointBlockDiagonal` for improved future integration with codes such as MFEM that compose the action of {ref}`CeedOperator`s external to libCEED. 266bcb2dfaeSJed Brown- Added {c:func}`CeedVectorTakeAray` to sync and remove libCEED read/write access to an allocated array and pass ownership of the array to the caller. 267bcb2dfaeSJed Brown This function is recommended over {c:func}`CeedVectorSyncArray` when the {code}`CeedVector` has an array owned by the caller that was set by {c:func}`CeedVectorSetArray`. 268bcb2dfaeSJed Brown- Added {code}`CeedQFunctionContext` object to manage user QFunction context data and reduce copies between device and host memory. 269bcb2dfaeSJed Brown- Added {c:func}`CeedOperatorMultigridLevelCreate`, {c:func}`CeedOperatorMultigridLevelCreateTensorH1`, and {c:func}`CeedOperatorMultigridLevelCreateH1` to facilitate creation of multigrid prolongation, restriction, and coarse grid operators using a common quadrature space. 270bcb2dfaeSJed Brown 271bcb2dfaeSJed Brown### New features 272bcb2dfaeSJed Brown 273bcb2dfaeSJed Brown- New HIP backend: `/gpu/hip/ref`. 274bcb2dfaeSJed Brown- CeedQFunction support for user `CUfunction`s in some backends 275bcb2dfaeSJed Brown 276bcb2dfaeSJed Brown### Performance improvements 277bcb2dfaeSJed Brown 278bcb2dfaeSJed Brown- OCCA backend rebuilt to facilitate future performance enhancements. 279a745612cSJeremy L Thompson- PETSc BPs suite improved to reduce noise due to multiple calls to {code}`mpiexec`. 280bcb2dfaeSJed Brown 281bcb2dfaeSJed Brown### Examples 282bcb2dfaeSJed Brown 283bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with strain energy computation and more flexible boundary conditions. 284bcb2dfaeSJed Brown 285bcb2dfaeSJed Brown### Deprecated backends 286bcb2dfaeSJed Brown 287bcb2dfaeSJed Brown- The `/gpu/cuda/reg` backend has been removed, with its core features moved into `/gpu/cuda/ref` and `/gpu/cuda/shared`. 288bcb2dfaeSJed Brown 289bcb2dfaeSJed Brown(v0-6)= 290bcb2dfaeSJed Brown 291bcb2dfaeSJed Brown## v0.6 (Mar 29, 2020) 292bcb2dfaeSJed Brown 293bcb2dfaeSJed BrownlibCEED v0.6 contains numerous new features and examples, as well as expanded 29413964f07SJed Browndocumentation in [this new website](https://libceed.org). 295bcb2dfaeSJed Brown 296bcb2dfaeSJed Brown### New features 297bcb2dfaeSJed Brown 298bcb2dfaeSJed Brown- New Python interface using [CFFI](https://cffi.readthedocs.io/) provides a nearly 299bcb2dfaeSJed Brown 1-1 correspondence with the C interface, plus some convenience features. For instance, 300bcb2dfaeSJed Brown data stored in the {cpp:type}`CeedVector` structure are available without copy as 301bcb2dfaeSJed Brown {py:class}`numpy.ndarray`. Short tutorials are provided in 302bcb2dfaeSJed Brown [Binder](https://mybinder.org/v2/gh/CEED/libCEED/main?urlpath=lab/tree/examples/tutorials/). 303bcb2dfaeSJed Brown- Linear QFunctions can be assembled as block-diagonal matrices (per quadrature point, 304bcb2dfaeSJed Brown {c:func}`CeedOperatorAssembleLinearQFunction`) or to evaluate the diagonal 305bcb2dfaeSJed Brown ({c:func}`CeedOperatorAssembleLinearDiagonal`). These operations are useful for 306bcb2dfaeSJed Brown preconditioning ingredients and are used in the libCEED's multigrid examples. 307bcb2dfaeSJed Brown- The inverse of separable operators can be obtained using 308bcb2dfaeSJed Brown {c:func}`CeedOperatorCreateFDMElementInverse` and applied with 309bcb2dfaeSJed Brown {c:func}`CeedOperatorApply`. This is a useful preconditioning ingredient, 310bcb2dfaeSJed Brown especially for Laplacians and related operators. 311bcb2dfaeSJed Brown- New functions: {c:func}`CeedVectorNorm`, {c:func}`CeedOperatorApplyAdd`, 312bcb2dfaeSJed Brown {c:func}`CeedQFunctionView`, {c:func}`CeedOperatorView`. 313bcb2dfaeSJed Brown- Make public accessors for various attributes to facilitate writing composable code. 314bcb2dfaeSJed Brown- New backend: `/cpu/self/memcheck/serial`. 315bcb2dfaeSJed Brown- QFunctions using variable-length array (VLA) pointer constructs can be used with CUDA 316bcb2dfaeSJed Brown backends. (Single source is coming soon for OCCA backends.) 317bcb2dfaeSJed Brown- Fix some missing edge cases in CUDA backend. 318bcb2dfaeSJed Brown 319bcb2dfaeSJed Brown### Performance Improvements 320bcb2dfaeSJed Brown 321bcb2dfaeSJed Brown- MAGMA backend performance optimization and non-tensor bases. 322bcb2dfaeSJed Brown- No-copy optimization in {c:func}`CeedOperatorApply`. 323bcb2dfaeSJed Brown 324bcb2dfaeSJed Brown### Interface changes 325bcb2dfaeSJed Brown 326bcb2dfaeSJed Brown- Replace {code}`CeedElemRestrictionCreateIdentity` and 327bcb2dfaeSJed Brown {code}`CeedElemRestrictionCreateBlocked` with more flexible 328bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionCreateStrided` and 329bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionCreateBlockedStrided`. 330bcb2dfaeSJed Brown- Add arguments to {c:func}`CeedQFunctionCreateIdentity`. 331bcb2dfaeSJed Brown- Replace ambiguous uses of {cpp:enum}`CeedTransposeMode` for L-vector identification 332bcb2dfaeSJed Brown with {cpp:enum}`CeedInterlaceMode`. This is now an attribute of the 333bcb2dfaeSJed Brown {cpp:type}`CeedElemRestriction` (see {c:func}`CeedElemRestrictionCreate`) and no 334bcb2dfaeSJed Brown longer passed as `lmode` arguments to {c:func}`CeedOperatorSetField` and 335bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionApply`. 336bcb2dfaeSJed Brown 337bcb2dfaeSJed Brown### Examples 338bcb2dfaeSJed Brown 339bcb2dfaeSJed BrownlibCEED-0.6 contains greatly expanded examples with {ref}`new documentation <Examples>`. 340bcb2dfaeSJed BrownNotable additions include: 341bcb2dfaeSJed Brown 342bcb2dfaeSJed Brown- Standalone {ref}`ex2-surface` ({file}`examples/ceed/ex2-surface`): compute the area of 343bcb2dfaeSJed Brown a domain in 1, 2, and 3 dimensions by applying a Laplacian. 344bcb2dfaeSJed Brown 345bcb2dfaeSJed Brown- PETSc {ref}`example-petsc-area` ({file}`examples/petsc/area.c`): computes surface area 346bcb2dfaeSJed Brown of domains (like the cube and sphere) by direct integration on a surface mesh; 347bcb2dfaeSJed Brown demonstrates geometric dimension different from topological dimension. 348bcb2dfaeSJed Brown 349bcb2dfaeSJed Brown- PETSc {ref}`example-petsc-bps`: 350bcb2dfaeSJed Brown 351bcb2dfaeSJed Brown - {file}`examples/petsc/bpsraw.c` (formerly `bps.c`): transparent CUDA support. 352bcb2dfaeSJed Brown - {file}`examples/petsc/bps.c` (formerly `bpsdmplex.c`): performance improvements 353bcb2dfaeSJed Brown and transparent CUDA support. 354bcb2dfaeSJed Brown - {ref}`example-petsc-bps-sphere` ({file}`examples/petsc/bpssphere.c`): 355bcb2dfaeSJed Brown generalizations of all CEED BPs to the surface of the sphere; demonstrates geometric 356bcb2dfaeSJed Brown dimension different from topological dimension. 357bcb2dfaeSJed Brown 358bcb2dfaeSJed Brown- {ref}`example-petsc-multigrid` ({file}`examples/petsc/multigrid.c`): new p-multigrid 359bcb2dfaeSJed Brown solver with algebraic multigrid coarse solve. 360bcb2dfaeSJed Brown 361bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` ({file}`examples/fluids/navierstokes.c`; formerly 362bcb2dfaeSJed Brown `examples/navier-stokes`): unstructured grid support (using PETSc's `DMPlex`), 363bcb2dfaeSJed Brown implicit time integration, SU/SUPG stabilization, free-slip boundary conditions, and 364bcb2dfaeSJed Brown quasi-2D computational domain support. 365bcb2dfaeSJed Brown 366bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` ({file}`examples/solids/elasticity.c`): new solver for 367bcb2dfaeSJed Brown linear elasticity, small-strain hyperelasticity, and globalized finite-strain 368bcb2dfaeSJed Brown hyperelasticity using p-multigrid with algebraic multigrid coarse solve. 369bcb2dfaeSJed Brown 370bcb2dfaeSJed Brown(v0-5)= 371bcb2dfaeSJed Brown 372bcb2dfaeSJed Brown## v0.5 (Sep 18, 2019) 373bcb2dfaeSJed Brown 374bcb2dfaeSJed BrownFor this release, several improvements were made. Two new CUDA backends were added to 375bcb2dfaeSJed Brownthe family of backends, of which, the new `cuda-gen` backend achieves state-of-the-art 376bcb2dfaeSJed Brownperformance using single-source {ref}`CeedQFunction`. From this release, users 377bcb2dfaeSJed Browncan define Q-Functions in a single source code independently of the targeted backend 378bcb2dfaeSJed Brownwith the aid of a new macro `CEED QFUNCTION` to support JIT (Just-In-Time) and CPU 379bcb2dfaeSJed Browncompilation of the user provided {ref}`CeedQFunction` code. To allow a unified 380bcb2dfaeSJed Browndeclaration, the {ref}`CeedQFunction` API has undergone a slight change: 381bcb2dfaeSJed Brownthe `QFunctionField` parameter `ncomp` has been changed to `size`. This change 382bcb2dfaeSJed Brownrequires setting the previous value of `ncomp` to `ncomp*dim` when adding a 383bcb2dfaeSJed Brown`QFunctionField` with eval mode `CEED EVAL GRAD`. 384bcb2dfaeSJed Brown 385bcb2dfaeSJed BrownAdditionally, new CPU backends 386bcb2dfaeSJed Brownwere included in this release, such as the `/cpu/self/opt/*` backends (which are 387bcb2dfaeSJed Brownwritten in pure C and use partial **E-vectors** to improve performance) and the 388bcb2dfaeSJed Brown`/cpu/self/ref/memcheck` backend (which relies upon the 389bcb2dfaeSJed Brown[Valgrind](http://valgrind.org/) Memcheck tool to help verify that user 390bcb2dfaeSJed Brown{ref}`CeedQFunction` have no undefined values). 391bcb2dfaeSJed BrownThis release also included various performance improvements, bug fixes, new examples, 392bcb2dfaeSJed Brownand improved tests. Among these improvements, vectorized instructions for 393bcb2dfaeSJed Brown{ref}`CeedQFunction` code compiled for CPU were enhanced by using `CeedPragmaSIMD` 394bcb2dfaeSJed Browninstead of `CeedPragmaOMP`, implementation of a {ref}`CeedQFunction` gallery and 395bcb2dfaeSJed Brownidentity Q-Functions were introduced, and the PETSc benchmark problems were expanded 396bcb2dfaeSJed Brownto include unstructured meshes handling were. For this expansion, the prior version of 397bcb2dfaeSJed Brownthe PETSc BPs, which only included data associated with structured geometries, were 398bcb2dfaeSJed Brownrenamed `bpsraw`, and the new version of the BPs, which can handle data associated 399bcb2dfaeSJed Brownwith any unstructured geometry, were called `bps`. Additionally, other benchmark 400bcb2dfaeSJed Brownproblems, namely BP2 and BP4 (the vector-valued versions of BP1 and BP3, respectively), 401bcb2dfaeSJed Brownand BP5 and BP6 (the collocated versions---for which the quadrature points are the same 402bcb2dfaeSJed Brownas the Gauss Lobatto nodes---of BP3 and BP4 respectively) were added to the PETSc 403bcb2dfaeSJed Brownexamples. Furthermoew, another standalone libCEED example, called `ex2`, which 404bcb2dfaeSJed Browncomputes the surface area of a given mesh was added to this release. 405bcb2dfaeSJed Brown 406bcb2dfaeSJed BrownBackends available in this release: 407bcb2dfaeSJed Brown 40868e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 40968e843eeSJed Brown|--------------------------|-----------------------------------------------------| 41068e843eeSJed Brown| `/cpu/self/ref/serial` | Serial reference implementation | 41168e843eeSJed Brown| `/cpu/self/ref/blocked` | Blocked reference implementation | 41268e843eeSJed Brown| `/cpu/self/ref/memcheck` | Memcheck backend, undefined value checks | 41368e843eeSJed Brown| `/cpu/self/opt/serial` | Serial optimized C implementation | 41468e843eeSJed Brown| `/cpu/self/opt/blocked` | Blocked optimized C implementation | 41568e843eeSJed Brown| `/cpu/self/avx/serial` | Serial AVX implementation | 41668e843eeSJed Brown| `/cpu/self/avx/blocked` | Blocked AVX implementation | 41768e843eeSJed Brown| `/cpu/self/xsmm/serial` | Serial LIBXSMM implementation | 41868e843eeSJed Brown| `/cpu/self/xsmm/blocked` | Blocked LIBXSMM implementation | 41968e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 42068e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 42168e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 42268e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 42368e843eeSJed Brown| `/gpu/cuda/ref` | Reference pure CUDA kernels | 42468e843eeSJed Brown| `/gpu/cuda/reg` | Pure CUDA kernels using one thread per element | 42568e843eeSJed Brown| `/gpu/cuda/shared` | Optimized pure CUDA kernels using shared memory | 42668e843eeSJed Brown| `/gpu/cuda/gen` | Optimized pure CUDA kernels using code generation | 42768e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 428bcb2dfaeSJed Brown 429bcb2dfaeSJed BrownExamples available in this release: 430bcb2dfaeSJed Brown 43168e843eeSJed Brown:::{list-table} 43268e843eeSJed Brown:header-rows: 1 43368e843eeSJed Brown:widths: auto 43468e843eeSJed Brown* - User code 43568e843eeSJed Brown - Example 43668e843eeSJed Brown* - `ceed` 43768e843eeSJed Brown - * ex1 (volume) 43868e843eeSJed Brown * ex2 (surface) 43968e843eeSJed Brown* - `mfem` 44068e843eeSJed Brown - * BP1 (scalar mass operator) 44168e843eeSJed Brown * BP3 (scalar Laplace operator) 44268e843eeSJed Brown* - `petsc` 44368e843eeSJed Brown - * BP1 (scalar mass operator) 44468e843eeSJed Brown * BP2 (vector mass operator) 44568e843eeSJed Brown * BP3 (scalar Laplace operator) 44668e843eeSJed Brown * BP4 (vector Laplace operator) 44768e843eeSJed Brown * BP5 (collocated scalar Laplace operator) 44868e843eeSJed Brown * BP6 (collocated vector Laplace operator) 44968e843eeSJed Brown * Navier-Stokes 45068e843eeSJed Brown* - `nek5000` 45168e843eeSJed Brown - * BP1 (scalar mass operator) 45268e843eeSJed Brown * BP3 (scalar Laplace operator) 45368e843eeSJed Brown::: 454bcb2dfaeSJed Brown 455bcb2dfaeSJed Brown(v0-4)= 456bcb2dfaeSJed Brown 457bcb2dfaeSJed Brown## v0.4 (Apr 1, 2019) 458bcb2dfaeSJed Brown 459bcb2dfaeSJed BrownlibCEED v0.4 was made again publicly available in the second full CEED software 460bcb2dfaeSJed Browndistribution, release CEED 2.0. This release contained notable features, such as 461bcb2dfaeSJed Brownfour new CPU backends, two new GPU backends, CPU backend optimizations, initial 462bcb2dfaeSJed Brownsupport for operator composition, performance benchmarking, and a Navier-Stokes demo. 463bcb2dfaeSJed BrownThe new CPU backends in this release came in two families. The `/cpu/self/*/serial` 464bcb2dfaeSJed Brownbackends process one element at a time and are intended for meshes with a smaller number 465bcb2dfaeSJed Brownof high order elements. The `/cpu/self/*/blocked` backends process blocked batches of 466bcb2dfaeSJed Browneight interlaced elements and are intended for meshes with higher numbers of elements. 467bcb2dfaeSJed BrownThe `/cpu/self/avx/*` backends rely upon AVX instructions to provide vectorized CPU 468bcb2dfaeSJed Brownperformance. The `/cpu/self/xsmm/*` backends rely upon the 469bcb2dfaeSJed Brown[LIBXSMM](http://github.com/hfp/libxsmm) package to provide vectorized CPU 470bcb2dfaeSJed Brownperformance. The `/gpu/cuda/*` backends provide GPU performance strictly using CUDA. 471bcb2dfaeSJed BrownThe `/gpu/cuda/ref` backend is a reference CUDA backend, providing reasonable 472bcb2dfaeSJed Brownperformance for most problem configurations. The `/gpu/cuda/reg` backend uses a simple 473bcb2dfaeSJed Brownparallelization approach, where each thread treats a finite element. Using just in time 474bcb2dfaeSJed Browncompilation, provided by nvrtc (NVidia Runtime Compiler), and runtime parameters, this 475bcb2dfaeSJed Brownbackend unroll loops and map memory address to registers. The `/gpu/cuda/reg` backend 476bcb2dfaeSJed Brownachieve good peak performance for 1D, 2D, and low order 3D problems, but performance 477bcb2dfaeSJed Browndeteriorates very quickly when threads run out of registers. 478bcb2dfaeSJed Brown 479bcb2dfaeSJed BrownA new explicit time-stepping Navier-Stokes solver was added to the family of libCEED 480bcb2dfaeSJed Brownexamples in the `examples/petsc` directory (see {ref}`example-petsc-navier-stokes`). 481bcb2dfaeSJed BrownThis example solves the time-dependent Navier-Stokes equations of compressible gas 482bcb2dfaeSJed Browndynamics in a static Eulerian three-dimensional frame, using structured high-order 483bcb2dfaeSJed Brownfinite/spectral element spatial discretizations and explicit high-order time-stepping 484bcb2dfaeSJed Brown(available in PETSc). Moreover, the Navier-Stokes example was developed using PETSc, 485bcb2dfaeSJed Brownso that the pointwise physics (defined at quadrature points) is separated from the 486bcb2dfaeSJed Brownparallelization and meshing concerns. 487bcb2dfaeSJed Brown 488bcb2dfaeSJed BrownBackends available in this release: 489bcb2dfaeSJed Brown 49068e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 49168e843eeSJed Brown|--------------------------|-----------------------------------------------------| 49268e843eeSJed Brown| `/cpu/self/ref/serial` | Serial reference implementation | 49368e843eeSJed Brown| `/cpu/self/ref/blocked` | Blocked reference implementation | 49468e843eeSJed Brown| `/cpu/self/tmpl` | Backend template, defaults to `/cpu/self/blocked` | 49568e843eeSJed Brown| `/cpu/self/avx/serial` | Serial AVX implementation | 49668e843eeSJed Brown| `/cpu/self/avx/blocked` | Blocked AVX implementation | 49768e843eeSJed Brown| `/cpu/self/xsmm/serial` | Serial LIBXSMM implementation | 49868e843eeSJed Brown| `/cpu/self/xsmm/blocked` | Blocked LIBXSMM implementation | 49968e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 50068e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 50168e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 50268e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 50368e843eeSJed Brown| `/gpu/cuda/ref` | Reference pure CUDA kernels | 50468e843eeSJed Brown| `/gpu/cuda/reg` | Pure CUDA kernels using one thread per element | 50568e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 506bcb2dfaeSJed Brown 507bcb2dfaeSJed BrownExamples available in this release: 508bcb2dfaeSJed Brown 50968e843eeSJed Brown:::{list-table} 51068e843eeSJed Brown:header-rows: 1 51168e843eeSJed Brown:widths: auto 51268e843eeSJed Brown* - User code 51368e843eeSJed Brown - Example 51468e843eeSJed Brown* - `ceed` 51568e843eeSJed Brown - * ex1 (volume) 51668e843eeSJed Brown* - `mfem` 51768e843eeSJed Brown - * BP1 (scalar mass operator) 51868e843eeSJed Brown * BP3 (scalar Laplace operator) 51968e843eeSJed Brown* - `petsc` 52068e843eeSJed Brown - * BP1 (scalar mass operator) 52168e843eeSJed Brown * BP3 (scalar Laplace operator) 52268e843eeSJed Brown * Navier-Stokes 52368e843eeSJed Brown* - `nek5000` 52468e843eeSJed Brown - * BP1 (scalar mass operator) 52568e843eeSJed Brown * BP3 (scalar Laplace operator) 52668e843eeSJed Brown::: 527bcb2dfaeSJed Brown 528bcb2dfaeSJed Brown(v0-3)= 529bcb2dfaeSJed Brown 530bcb2dfaeSJed Brown## v0.3 (Sep 30, 2018) 531bcb2dfaeSJed Brown 532bcb2dfaeSJed BrownNotable features in this release include active/passive field interface, support for 533bcb2dfaeSJed Brownnon-tensor bases, backend optimization, and improved Fortran interface. This release 534bcb2dfaeSJed Brownalso focused on providing improved continuous integration, and many new tests with code 535bcb2dfaeSJed Browncoverage reports of about 90%. This release also provided a significant change to the 536bcb2dfaeSJed Brownpublic interface: a {ref}`CeedQFunction` can take any number of named input and output 537bcb2dfaeSJed Brownarguments while {ref}`CeedOperator` connects them to the actual data, which may be 538bcb2dfaeSJed Brownsupplied explicitly to `CeedOperatorApply()` (active) or separately via 539bcb2dfaeSJed Brown`CeedOperatorSetField()` (passive). This interface change enables reusable libraries 540bcb2dfaeSJed Brownof CeedQFunctions and composition of block solvers constructed using 541bcb2dfaeSJed Brown{ref}`CeedOperator`. A concept of blocked restriction was added to this release and 542bcb2dfaeSJed Brownused in an optimized CPU backend. Although this is typically not visible to the user, 543bcb2dfaeSJed Brownit enables effective use of arbitrary-length SIMD while maintaining cache locality. 544bcb2dfaeSJed BrownThis CPU backend also implements an algebraic factorization of tensor product gradients 545bcb2dfaeSJed Brownto perform fewer operations than standard application of interpolation and 546bcb2dfaeSJed Browndifferentiation from nodes to quadrature points. This algebraic formulation 547bcb2dfaeSJed Brownautomatically supports non-polynomial and non-interpolatory bases, thus is more general 548bcb2dfaeSJed Brownthan the more common derivation in terms of Lagrange polynomials on the quadrature points. 549bcb2dfaeSJed Brown 550bcb2dfaeSJed BrownBackends available in this release: 551bcb2dfaeSJed Brown 55268e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 55368e843eeSJed Brown|-------------------------|-----------------------------------------------------| 55468e843eeSJed Brown| `/cpu/self/blocked` | Blocked reference implementation | 55568e843eeSJed Brown| `/cpu/self/ref` | Serial reference implementation | 55668e843eeSJed Brown| `/cpu/self/tmpl` | Backend template, defaults to `/cpu/self/blocked` | 55768e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 55868e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 55968e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 56068e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 56168e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 562bcb2dfaeSJed Brown 563bcb2dfaeSJed BrownExamples available in this release: 564bcb2dfaeSJed Brown 56568e843eeSJed Brown:::{list-table} 56668e843eeSJed Brown:header-rows: 1 56768e843eeSJed Brown:widths: auto 56868e843eeSJed Brown* - User code 56968e843eeSJed Brown - Example 57068e843eeSJed Brown* - `ceed` 57168e843eeSJed Brown - * ex1 (volume) 57268e843eeSJed Brown* - `mfem` 57368e843eeSJed Brown - * BP1 (scalar mass operator) 57468e843eeSJed Brown * BP3 (scalar Laplace operator) 57568e843eeSJed Brown* - `petsc` 57668e843eeSJed Brown - * BP1 (scalar mass operator) 57768e843eeSJed Brown * BP3 (scalar Laplace operator) 57868e843eeSJed Brown* - `nek5000` 57968e843eeSJed Brown - * BP1 (scalar mass operator) 58068e843eeSJed Brown * BP3 (scalar Laplace operator) 58168e843eeSJed Brown::: 582bcb2dfaeSJed Brown 583bcb2dfaeSJed Brown(v0-21)= 584bcb2dfaeSJed Brown 585bcb2dfaeSJed Brown## v0.21 (Sep 30, 2018) 586bcb2dfaeSJed Brown 587bcb2dfaeSJed BrownA MAGMA backend (which relies upon the 588bcb2dfaeSJed Brown[MAGMA](https://bitbucket.org/icl/magma) package) was integrated in libCEED for this 589bcb2dfaeSJed Brownrelease. This initial integration set up the framework of using MAGMA and provided the 590bcb2dfaeSJed BrownlibCEED functionality through MAGMA kernels as one of libCEED’s computational backends. 591bcb2dfaeSJed BrownAs any other backend, the MAGMA backend provides extended basic data structures for 592bcb2dfaeSJed Brown{ref}`CeedVector`, {ref}`CeedElemRestriction`, and {ref}`CeedOperator`, and implements 593bcb2dfaeSJed Brownthe fundamental CEED building blocks to work with the new data structures. 594bcb2dfaeSJed BrownIn general, the MAGMA-specific data structures keep the libCEED pointers to CPU data 595bcb2dfaeSJed Brownbut also add corresponding device (e.g., GPU) pointers to the data. Coherency is handled 596bcb2dfaeSJed Browninternally, and thus seamlessly to the user, through the functions/methods that are 597bcb2dfaeSJed Brownprovided to support them. 598bcb2dfaeSJed Brown 599bcb2dfaeSJed BrownBackends available in this release: 600bcb2dfaeSJed Brown 60168e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 60268e843eeSJed Brown|-------------------------|---------------------------------| 60368e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 60468e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 60568e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 60668e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 60768e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 60868e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 609bcb2dfaeSJed Brown 610bcb2dfaeSJed BrownExamples available in this release: 611bcb2dfaeSJed Brown 61268e843eeSJed Brown:::{list-table} 61368e843eeSJed Brown:header-rows: 1 61468e843eeSJed Brown:widths: auto 61568e843eeSJed Brown* - User code 61668e843eeSJed Brown - Example 61768e843eeSJed Brown* - `ceed` 61868e843eeSJed Brown - * ex1 (volume) 61968e843eeSJed Brown* - `mfem` 62068e843eeSJed Brown - * BP1 (scalar mass operator) 62168e843eeSJed Brown * BP3 (scalar Laplace operator) 62268e843eeSJed Brown* - `petsc` 62368e843eeSJed Brown - * BP1 (scalar mass operator) 62468e843eeSJed Brown* - `nek5000` 62568e843eeSJed Brown - * BP1 (scalar mass operator) 62668e843eeSJed Brown::: 627bcb2dfaeSJed Brown 628bcb2dfaeSJed Brown(v0-2)= 629bcb2dfaeSJed Brown 630bcb2dfaeSJed Brown## v0.2 (Mar 30, 2018) 631bcb2dfaeSJed Brown 632bcb2dfaeSJed BrownlibCEED was made publicly available the first full CEED software distribution, release 633bcb2dfaeSJed BrownCEED 1.0. The distribution was made available using the Spack package manager to provide 634bcb2dfaeSJed Browna common, easy-to-use build environment, where the user can build the CEED distribution 635bcb2dfaeSJed Brownwith all dependencies. This release included a new Fortran interface for the library. 636bcb2dfaeSJed BrownThis release also contained major improvements in the OCCA backend (including a new 637bcb2dfaeSJed Brown`/ocl/occa` backend) and new examples. The standalone libCEED example was modified to 638bcb2dfaeSJed Browncompute the volume volume of a given mesh (in 1D, 2D, or 3D) and placed in an 639bcb2dfaeSJed Brown`examples/ceed` subfolder. A new `mfem` example to perform BP3 (with the application 640bcb2dfaeSJed Brownof the Laplace operator) was also added to this release. 641bcb2dfaeSJed Brown 642bcb2dfaeSJed BrownBackends available in this release: 643bcb2dfaeSJed Brown 64468e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 64568e843eeSJed Brown|-------------------------|---------------------------------| 64668e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 64768e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 64868e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 64968e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 65068e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 651bcb2dfaeSJed Brown 652bcb2dfaeSJed BrownExamples available in this release: 653bcb2dfaeSJed Brown 65468e843eeSJed Brown:::{list-table} 65568e843eeSJed Brown:header-rows: 1 65668e843eeSJed Brown:widths: auto 65768e843eeSJed Brown* - User code 65868e843eeSJed Brown - Example 65968e843eeSJed Brown* - `ceed` 66068e843eeSJed Brown - * ex1 (volume) 66168e843eeSJed Brown* - `mfem` 66268e843eeSJed Brown - * BP1 (scalar mass operator) 66368e843eeSJed Brown * BP3 (scalar Laplace operator) 66468e843eeSJed Brown* - `petsc` 66568e843eeSJed Brown - * BP1 (scalar mass operator) 66668e843eeSJed Brown* - `nek5000` 66768e843eeSJed Brown - * BP1 (scalar mass operator) 66868e843eeSJed Brown::: 669bcb2dfaeSJed Brown 670bcb2dfaeSJed Brown(v0-1)= 671bcb2dfaeSJed Brown 672bcb2dfaeSJed Brown## v0.1 (Jan 3, 2018) 673bcb2dfaeSJed Brown 674bcb2dfaeSJed BrownInitial low-level API of the CEED project. The low-level API provides a set of Finite 675bcb2dfaeSJed BrownElements kernels and components for writing new low-level kernels. Examples include: 676bcb2dfaeSJed Brownvector and sparse linear algebra, element matrix assembly over a batch of elements, 677bcb2dfaeSJed Brownpartial assembly and action for efficient high-order operators like mass, diffusion, 678bcb2dfaeSJed Brownadvection, etc. The main goal of the low-level API is to establish the basis for the 679bcb2dfaeSJed Brownhigh-level API. Also, identifying such low-level kernels and providing a reference 680bcb2dfaeSJed Brownimplementation for them serves as the basis for specialized backend implementations. 681bcb2dfaeSJed BrownThis release contained several backends: `/cpu/self`, and backends which rely upon the 682bcb2dfaeSJed Brown[OCCA](http://github.com/libocca/occa) package, such as `/cpu/occa`, 683bcb2dfaeSJed Brown`/gpu/occa`, and `/omp/occa`. 684bcb2dfaeSJed BrownIt also included several examples, in the `examples` folder: 685bcb2dfaeSJed BrownA standalone code that shows the usage of libCEED (with no external 686bcb2dfaeSJed Browndependencies) to apply the Laplace operator, `ex1`; an `mfem` example to perform BP1 687bcb2dfaeSJed Brown(with the application of the mass operator); and a `petsc` example to perform BP1 688bcb2dfaeSJed Brown(with the application of the mass operator). 689bcb2dfaeSJed Brown 690bcb2dfaeSJed BrownBackends available in this release: 691bcb2dfaeSJed Brown 69268e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 69368e843eeSJed Brown|-------------------------|---------------------------------| 69468e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 69568e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 69668e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 69768e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 698bcb2dfaeSJed Brown 699bcb2dfaeSJed BrownExamples available in this release: 700bcb2dfaeSJed Brown 701bcb2dfaeSJed Brown| User code | Example | 70268e843eeSJed Brown|-----------------------|-----------------------------------| 70368e843eeSJed Brown| `ceed` | ex1 (scalar Laplace operator) | 70468e843eeSJed Brown| `mfem` | BP1 (scalar mass operator) | 70568e843eeSJed Brown| `petsc` | BP1 (scalar mass operator) | 706bcb2dfaeSJed Brown``` 707