1bcb2dfaeSJed Brown# Changes/Release Notes 2bcb2dfaeSJed Brown 3f374d6a3SJeremy L ThompsonOn this page we provide a summary of the main API changes, new features and examples for each release of libCEED. 4bcb2dfaeSJed Brown 5bcb2dfaeSJed Brown(main)= 6bcb2dfaeSJed Brown 7bcb2dfaeSJed Brown## Current `main` branch 8bcb2dfaeSJed Brown 9ca567da4SJeremy L Thompson### Interface changes 10ca567da4SJeremy L Thompson 115b6ec284SJeremy L Thompson- Add `bool` field type for `CeedQFunctionContext` and related interfaces to use `bool` fields. 12a36217cbSJeremy L Thompson- `CEED_BASIS_COLLOCATED` removed; users should only use `CEED_BASIS_NONE`. 1362c1cb2aSJeremy L Thompson- Remove unneeded pointer for `CeedElemRestrictionGetELayout`. 14f6c445a1SJames Wright- Change QFunction source include file handling in JiT compilers 15f6c445a1SJames Wright - Add `CEED_RUNNING_JIT_PASS` compiler definition for wrapping header files that device JiT compilers cannot read 16f6c445a1SJames Wright - Users should now prefer `#include <ceed/types.h>` rather than `#include <ceed.h>` in QFunction source files 17dc3318a4SJeremy L Thompson- Require use of `Ceed*Destroy()` on Ceed objects returned from `Ceed*Get*()`. 185b6ec284SJeremy L Thompson 194018a20aSJeremy L Thompson### New features 204018a20aSJeremy L Thompson 2148acf710SJeremy L Thompson- Add `CeedOperatorCreateAtPoints` which evaluates the `CeedQFunction` at arbitrary locations in each element, for use in Particle in Cell, Material Point Method, and similar methods. 2262c1cb2aSJeremy L Thompson- Add `CeedElemRestrictionGetLLayout` to provide L-vector layout for strided `CeedElemRestriction` created with `CEED_BACKEND_STRIDES`. 236e536b99SJeremy L Thompson- Add `CeedVectorReturnCeed` and similar when parent `Ceed` context for a libCEED object is only needed once in a calling scope. 24101cc02cSJeremy L Thompson- Enable `#pragma once` for all JiT source; remove duplicate includes in JiT source string before compilation. 254753b775SJeremy L Thompson- Allow user to set additional compiler options for CUDA and HIP JiT. 264753b775SJeremy L ThompsonSpecifically, directories set with `CeedAddJitSourceRoot(ceed, "foo/bar")` will be used to set `-Ifoo/bar` and defines set with `CeedAddJitDefine(ceed, "foo=bar")` will be used to set `-Dfoo=bar`. 27da5de306SJeremy L Thompson- Added non-tensor basis support to code generation backends `/gpu/cuda/gen` and `/gpu/hip/gen`. 288b89f79dSJeremy L Thompson- Added support to code generation backends `/gpu/cuda/gen` and `/gpu/hip/gen` for operators with both tensor and non-tensor bases. 29*4f69910bSJed Brown- Add `CeedGetGitVersion()` to access the Git commit and dirty state of the repository at build time. 30*4f69910bSJed Brown- Add `CeedGetBuildConfiguration()` to access compilers, flags, and related information about the build environment. 3148acf710SJeremy L Thompson 324018a20aSJeremy L Thompson### Examples 334018a20aSJeremy L Thompson 34a745612cSJeremy L Thompson- Add deal.II example with CEED BP suite. 35a745612cSJeremy L Thompson 364018a20aSJeremy L Thompson(v0-12)= 374018a20aSJeremy L Thompson 384018a20aSJeremy L Thompson## v0.12 (Oct 31, 2023) 394018a20aSJeremy L Thompson 404018a20aSJeremy L Thompson### Interface changes 414018a20aSJeremy L Thompson 42ca567da4SJeremy L Thompson- Update `CeedOperatorContext*` functions to `CeedOperator*Context*` functions for consistency. 43ca567da4SJeremy L ThompsonFor example, `CeedOperatorContextGetFieldLabel` was renamed to `CeedOperatorGetContextFieldLabel`. 4437eda346SJeremy L Thompson- Removed `CeedBasisSetNumQuadraturePoints` as redundant and bug-prone interface. 45ca567da4SJeremy L Thompson 46de5900adSJames Wright### New features 47ca567da4SJeremy L Thompson 48b8c4711aSSebastian Grimberg- Added {c:func}`CeedOperatorGetFieldByName` to access a specific `CeedOperatorField` by its name. 49ca567da4SJeremy L Thompson- Update `/cpu/self/memcheck/*` backends to help verify `CeedVector` array access assumptions and `CeedQFunction` user output assumptions. 50ca567da4SJeremy L Thompson- Update {c:func}`CeedOperatorLinearAssembleDiagonal` to provide default implementation that supports `CeedOperator` with multiple active bases. 514018a20aSJeremy L Thompson- Added Sycl backends `/gpu/sycl/ref`, `/gpu/sycl/shared`, and `/gpu/sycl/gen`. 52ac5aa7bcSJeremy L Thompson- Added {c:func}`CeedBasisApplyAtPoints` for evaluation of values and derivatives at arbitrary points inside elements. 53b8c4711aSSebastian Grimberg- Added support for non-tensor $H(\text{curl})$ finite element spaces with {c:func}`CeedBasisCreateHcurl`. 54b8c4711aSSebastian Grimberg- Added {c:func}`CeedElemRestrictionCreateCurlOriented`, similar to {c:func}`CeedElemRestrictionCreateOriented`, for element restrictions requiring more general element transformations such as those for high-order $H(\text{curl})$ spaces on tetrahedra (see [https://dl.acm.org/doi/pdf/10.1145/3524456](https://dl.acm.org/doi/pdf/10.1145/3524456)). 5558c07c4fSSebastian Grimberg- Added {c:func}`CeedOperatorLinearAssemblePointBlockDiagonalSymbolic` to create COO mapping for mapping out of {c:func}`CeedOperatorLinearAssemblePointBlockDiagonal`. 5658c07c4fSSebastian Grimberg- Added support for application codes which manage multiple {ref}`Ceed` objects, parallelized across OpenMP threads. 57de5900adSJames Wright 58baf96a30SJames Wright### Examples 59baf96a30SJames Wright 604018a20aSJeremy L Thompson- Add `DMSwarm` example demonstrating interpolation from background mesh to swarm points and projection from swarm points to background mesh. 614018a20aSJeremy L Thompson 62baf96a30SJames Wright#### {ref}`example-petsc-bps` 63baf96a30SJames Wright 64b8c4711aSSebastian Grimberg- Requires PETSc version 3.19 or later. 65baf96a30SJames Wright 664018a20aSJeremy L Thompson#### {ref}`example-petsc-navier-stokes` 674018a20aSJeremy L Thompson 684018a20aSJeremy L Thompson- Updated restart and checkpointing interface. 694018a20aSJeremy L Thompson- Add data-driven subgrid-stress model. 704018a20aSJeremy L Thompson- Add differential filtering of solution. 714018a20aSJeremy L Thompson- Add turbulence statistics collection over spanwise-symmetric geometries. 724018a20aSJeremy L Thompson- Add Taylor-Green vortex initial condition. 734018a20aSJeremy L Thompson- Add Riemann-based outflow boundary conditions. 744018a20aSJeremy L Thompson- Added vortex shedding and flow past cylinder example, including calculations for lift, drag, and heat transfer. 754018a20aSJeremy L Thompson- Add Internal Damping Layer (IDL) for helping turbulent simulation stability. 764018a20aSJeremy L Thompson- Derive `CeedBasis` from `PetscFE`, and various other internal maintainability updates. 774018a20aSJeremy L Thompson 788ec64e9aSJed Brown(v0-11)= 798ec64e9aSJed Brown 808ec64e9aSJed Brown## v0.11 (Dec 24, 2022) 818ec64e9aSJed Brown 827e7773b5SJeremy L Thompson### Interface changes 837e7773b5SJeremy L Thompson 84ea6b5821SJeremy L Thompson- Added {c:func}`CeedOperatorSetName` for more readable {c:func}`CeedOperatorView` output. 85f113e5dcSJeremy L Thompson- Added {c:func}`CeedBasisCreateProjection` to facilitate interpolation between nodes for separate `CeedBases`. 86a00f0c56SJeremy L Thompson- Rename and move {c:func}`CeedCompositeOperatorGetNumSub` and {c:func}`CeedCompositeOperatorGetSubList` to public interface. 87356036faSJeremy L Thompson- Renamed `CEED_BASIS_COLLOCATED` to `CEED_BASIS_NONE` for clarity. 883384518aSJeremy L ThompsonSome users previously misinterpreted a `CeedOperator` field using `CEED_BASIS_COLLOCATED` as meaning that the entire `CeedOperator` used a quadrature space that is collocated with the nodal space of the active bases. 89ea6b5821SJeremy L Thompson 900f58c348SJeremy L Thompson### New features 916cccb8e4SJeremy L Thompson 920f58c348SJeremy L Thompson- Update `/cpu/self/memcheck/*` backends to help verify `CeedQFunctionContext` data sizes provided by user. 938ec64e9aSJed Brown- Improved support for $H(\text{div})$ bases. 94de5900adSJames Wright- Added `CeedInt_FMT` to support potential future use of larger integer sizes. 958ec64e9aSJed Brown- Added `CEED_QFUNCTION_ATTR` for setting compiler attributes/pragmas to `CEED_QFUNCTION_HELPER` and `CEED_QFUNCTION`. 960be03a92SJeremy L Thompson- OCCA backend updated to latest OCCA release; DPC++ and OMP OCCA modes enabled. 970be03a92SJeremy L ThompsonDue to a limitation of the OCCA parser, typedefs are required to use pointers to arrays in QFunctions with the OCCA backend. 980be03a92SJeremy L ThompsonThis issue will be fixed in a future OCCA release. 990f58c348SJeremy L Thompson 10044d7a66cSJeremy L Thompson### Bugfix 10144d7a66cSJeremy L Thompson 102f113e5dcSJeremy L Thompson- Fix bug in setting device id for GPU backends. 10344d7a66cSJeremy L Thompson- Fix storing of indices for `CeedElemRestriction` on the host with GPU backends. 1047b63f5c6SJed Brown- Fix `CeedElemRestriction` sizing for {c:func}`CeedOperatorAssemblePointBlockDiagonal`. 1056cccb8e4SJeremy L Thompson- Fix bugs in CPU implementation of {c:func}`CeedOperatorLinearAssemble` when there are different number of active input modes and active output modes. 1066cccb8e4SJeremy L Thompson 107e0e35436SJeremy L Thompson### Examples 108e0e35436SJeremy L Thompson 1098ec64e9aSJed Brown#### {ref}`example-petsc-navier-stokes` 1108ec64e9aSJed Brown 1118ec64e9aSJed Brown- Various performance enhancements, analytic matrix-free and assembled Jacobian, and PETSc solver configurations for GPUs. 1128ec64e9aSJed Brown- Refactored to improve code reuse and modularity. 1138ec64e9aSJed Brown- Support for primitive variables for more accurate boundary layers and all-speed flow. 1148ec64e9aSJed Brown- Added $YZ\beta$ shock capturing scheme and Shock Tube example. 1158ec64e9aSJed Brown- Added Channel example, with comparison to analytic solutions. 1168ec64e9aSJed Brown- Added Flat Plate with boundary layer mesh and compressible Blasius inflow condition based on Chebyshev collocation solution of the Blasius equations. 1178ec64e9aSJed Brown- Added strong and weak synthetic turbulence generation (STG) inflow boundary conditions. 1188ec64e9aSJed Brown- Added "freestream" boundary conditions based on HLLC Riemann solver. 1198ec64e9aSJed Brown- Automated stabilization coefficients for different basis degree. 1208ec64e9aSJed Brown 1218ec64e9aSJed Brown#### {ref}`example-petsc-bps` 1228ec64e9aSJed Brown 1238ec64e9aSJed Brown- Support for convergence studies. 124e0e35436SJeremy L Thompson 1259e201c85SYohann### Maintainability 1269e201c85SYohann 1279e201c85SYohann- Refactored `/gpu/cuda/shared` and `/gpu/cuda/gen` as well as `/gpu/hip/shared` and `/gpu/hip/gen` backend to improve maintainablity and reduce duplicated code. 1289e201c85SYohann- Enabled support for `p > 8` for `/gpu/*/shared` backends. 1298ec64e9aSJed Brown- Switch to `clang-format` over `astyle` for automatic formatting; Makefile command changed to `make format` from `make style`. 1308ec64e9aSJed Brown- Improved test harness. 1319e201c85SYohann 132f374d6a3SJeremy L Thompson(v0-10-1)= 133f374d6a3SJeremy L Thompson 134f374d6a3SJeremy L Thompson## v0.10.1 (Apr 11, 2022) 135f374d6a3SJeremy L Thompson 136f374d6a3SJeremy L Thompson### Interface changes 137f374d6a3SJeremy L Thompson 1386e15d496SJeremy L Thompson- Added {c:func}`CeedQFunctionSetUserFlopsEstimate` and {c:func}`CeedOperatorGetFlopsEstimate` to facilitate estimating FLOPs in operator application. 1396e15d496SJeremy L Thompson 140b3271f73Snbeams### New features 141b3271f73Snbeams 142b3271f73Snbeams- Switched MAGMA backends to use runtime compilation for tensor basis kernels (and element restriction kernels, in non-deterministic `/gpu/*/magma` backends). 143b3271f73SnbeamsThis reduces time to compile the library and increases the range of parameters for which the MAGMA tensor basis kernels will work. 144b3271f73Snbeams 1455766aa57SJeremy L Thompson### Bugfix 1465766aa57SJeremy L Thompson 1475766aa57SJeremy L Thompson- Install JiT source files in install directory to fix GPU functionality for installed libCEED. 1485766aa57SJeremy L Thompson 149667e613fSJeremy L Thompson(v0-10)= 150667e613fSJeremy L Thompson 1513ed90579SJeremy L Thompson## v0.10 (Mar 21, 2022) 152667e613fSJeremy L Thompson 153667e613fSJeremy L Thompson### Interface changes 154667e613fSJeremy L Thompson 1557e7773b5SJeremy L Thompson- Update {c:func}`CeedQFunctionGetFields` and {c:func}`CeedOperatorGetFields` to include number of fields. 156ce4822f6SJeremy L Thompson- Promote to the public API: QFunction and Operator field objects, `CeedQFunctionField` and `CeedOperatorField`, and associated getters, {c:func}`CeedQFunctionGetFields`; {c:func}`CeedQFunctionFieldGetName`; {c:func}`CeedQFunctionFieldGetSize`; {c:func}`CeedQFunctionFieldGetEvalMode`; {c:func}`CeedOperatorGetFields`; {c:func}`CeedOperatorFieldGetElemRestriction`; {c:func}`CeedOperatorFieldGetBasis`; and {c:func}`CeedOperatorFieldGetVector`. 157f04ea552SJeremy L Thompson- Clarify and document conditions where `CeedQFunction` and `CeedOperator` become immutable and no further fields or suboperators can be added. 15870a7ffb3SJeremy L Thompson- Add {c:func}`CeedOperatorLinearAssembleQFunctionBuildOrUpdate` to reduce object creation overhead in assembly of CeedOperator preconditioning ingredients. 1594db537f9SJeremy L Thompson- Promote {c:func}`CeedOperatorCheckReady`to the public API to facilitate interactive interfaces. 160dcc1e3ecSJeremy L Thompson- Warning added when compiling OCCA backend to alert users that this backend is experimental. 1619a1d3511SJeremy L Thompson- `ceed-backend.h`, `ceed-hash.h`, and `ceed-khash.h` removed. Users should use `ceed/backend.h`, `ceed/hash.h`, and `ceed/khash.h`. 16243e1b16fSJeremy L Thompson- Added {c:func}`CeedQFunctionGetKernelName`; refactored {c:func}`CeedQFunctionGetSourcePath` to exclude function kernel name. 1639c774eddSJeremy L Thompson- Clarify documentation for {c:func}`CeedVectorTakeArray`; this function will error if {c:func}`CeedVectorSetArray` with `copy_mode == CEED_USE_POINTER` was not previously called for the corresponding `CeedMemType`. 164ac5aa7bcSJeremy L Thompson- Added {c:func}`CeedVectorGetArrayWrite` that allows access to uninitialized arrays; require initialized data for {c:func}`CeedVectorGetArray`. 165c38440baSJed Brown- Added {c:func}`CeedQFunctionContextRegisterDouble` and {c:func}`CeedQFunctionContextRegisterInt32` with {c:func}`CeedQFunctionContextSetDouble` and {c:func}`CeedQFunctionContextSetInt32` to facilitate easy updating of {c:struct}`CeedQFunctionContext` data by user defined field names. 166ac5aa7bcSJeremy L Thompson- Added {c:func}`CeedQFunctionContextGetFieldDescriptions` to retrieve user defined descriptions of fields that are registered with `CeedQFunctionContextRegister*`. 1677a06ec9fSJeremy L Thompson- Renamed `CeedElemTopology` entries for clearer namespacing between libCEED enums. 168f4f98f9dSJeremy L Thompson- Added type `CeedSize` equivalent to `ptrdiff_t` for array sizes in {c:func}`CeedVectorCreate`, {c:func}`CeedVectorGetLength`, `CeedElemRestrictionCreate*`, {c:func}`CeedElemRestrictionGetLVectorSize`, and {c:func}`CeedOperatorLinearAssembleSymbolic`. This is a breaking change. 1698b919e6bSJeremy L Thompson- Added {c:func}`CeedOperatorSetQFunctionUpdated` to facilitate QFunction data re-use between operators sharing the same quadrature space, such as in a multigrid hierarchy. 170c9366a6bSJeremy L Thompson- Added {c:func}`CeedOperatorGetActiveVectorLengths` to get shape of CeedOperator. 1717e7773b5SJeremy L Thompson 172f479eb23SJeremy L Thompson### New features 173f479eb23SJeremy L Thompson 174f479eb23SJeremy L Thompson- `CeedScalar` can now be set as `float` or `double` at compile time. 17530601ac0SJeremy L Thompson- Added JiT utilities in `ceed/jit-tools.h` to reduce duplicated code in GPU backends. 176fb3c7d02SJeremy L Thompson- Added support for JiT of QFunctions with `#include "relative/path/local-file.h"` statements for additional local files. Note that files included with `""` are searched relative to the current file first, then by compiler paths (as with `<>` includes). To use this feature, one should adhere to relative paths only, not compiler flags like `-I`, which the JiT will not be aware of. 17723dfbf5bSJeremy L Thompson- Remove need to guard library headers in QFunction source for code generation backends. 1783f21f6b1SJeremy L Thompson- `CeedDebugEnv()` macro created to provide debugging outputs when Ceed context is not present. 179f7e22acaSJeremy L Thompson- Added {c:func}`CeedStringAllocCopy` to reduce repeated code for copying strings internally. 1803451974fSJeremy L Thompson- Added {c:func}`CeedPathConcatenate` to facilitate loading kernel source files with a path relative to the current file. 181b8c4711aSSebastian Grimberg- Added support for non-tensor $H(\text{div})$ elements, to include CPU backend implementations and {c:func}`CeedBasisCreateHdiv` convenience constructor. 182d34e270fSJeremy L Thompson- Added {c:func}`CeedQFunctionSetContextWritable` and read-only access to `CeedQFunctionContext` data as an optional feature to improve GPU performance. By default, calling the `CeedQFunctionUser` during {c:func}`CeedQFunctionApply` is assumed to write into the `CeedQFunctionContext` data, consistent with the previous behavior. Note that if a user asserts that their `CeedQFunctionUser` does not write into the `CeedQFunctionContext` data, they are responsible for the validity of this assertion. 18359ad764aSnbeams- Added support for element matrix assembly in GPU backends. 184f479eb23SJeremy L Thompson 185bcb2dfaeSJed Brown### Maintainability 186bcb2dfaeSJed Brown 187bcb2dfaeSJed Brown- Refactored preconditioner support internally to facilitate future development and improve GPU completeness/test coverage. 188db52d626SJeremy L Thompson- `Include-what-you-use` makefile target added as `make iwyu`. 189bf4cb664SJeremy L Thompson- Create backend constant `CEED_FIELD_MAX` to reduce magic numbers in codebase. 1903451974fSJeremy L Thompson- Put GPU JiTed kernel source code into separate files. 191f9996dfdSJeremy L Thompson- Dropped legacy version support in PETSc based examples to better utilize PETSc DMPlex and Mat updates to support libCEED; current minimum PETSc version for the examples is v3.17. 192bcb2dfaeSJed Brown 193bcb2dfaeSJed Brown(v0-9)= 194bcb2dfaeSJed Brown 195bcb2dfaeSJed Brown## v0.9 (Jul 6, 2021) 196bcb2dfaeSJed Brown 197bcb2dfaeSJed Brown### Interface changes 198bcb2dfaeSJed Brown 199bcb2dfaeSJed Brown- Minor modification in error handling macro to silence pedantic warnings when compiling with Clang, but no functional impact. 200bcb2dfaeSJed Brown 201bcb2dfaeSJed Brown### New features 202bcb2dfaeSJed Brown 203bcb2dfaeSJed Brown- Add {c:func}`CeedVectorAXPY` and {c:func}`CeedVectorPointwiseMult` as a convenience for stand-alone testing and internal use. 204bcb2dfaeSJed Brown- Add `CEED_QFUNCTION_HELPER` macro to properly annotate QFunction helper functions for code generation backends. 205bcb2dfaeSJed Brown- Add `CeedPragmaOptimizeOff` macro for code that is sensitive to floating point errors from fast math optimizations. 206bcb2dfaeSJed Brown- Rust support: split `libceed-sys` crate out of `libceed` and [publish both on crates.io](https://crates.io/crates/libceed). 207bcb2dfaeSJed Brown 208bcb2dfaeSJed Brown### Performance improvements 209bcb2dfaeSJed Brown 210bcb2dfaeSJed Brown### Examples 211bcb2dfaeSJed Brown 212bcb2dfaeSJed Brown- Solid mechanics mini-app updated to explore the performance impacts of various formulations in the initial and current configurations. 213bcb2dfaeSJed Brown- Fluid mechanics example adds GPU support and improves modularity. 214bcb2dfaeSJed Brown 215bcb2dfaeSJed Brown### Deprecated backends 216bcb2dfaeSJed Brown 217bcb2dfaeSJed Brown- The `/cpu/self/tmpl` and `/cpu/self/tmpl/sub` backends have been removed. These backends were intially added to test the backend inheritance mechanism, but this mechanism is now widely used and tested in multiple backends. 218bcb2dfaeSJed Brown 219bcb2dfaeSJed Brown(v0-8)= 220bcb2dfaeSJed Brown 221bcb2dfaeSJed Brown## v0.8 (Mar 31, 2021) 222bcb2dfaeSJed Brown 223bcb2dfaeSJed Brown### Interface changes 224bcb2dfaeSJed Brown 225bcb2dfaeSJed Brown- Error handling improved to include enumerated error codes for C interface return values. 226bcb2dfaeSJed Brown- Installed headers that will follow semantic versioning were moved to {code}`include/ceed` directory. These headers have been renamed from {code}`ceed-*.h` to {code}`ceed/*.h`. Placeholder headers with the old naming schema are currently provided, but these headers will be removed in the libCEED v0.9 release. 227bcb2dfaeSJed Brown 228bcb2dfaeSJed Brown### New features 229bcb2dfaeSJed Brown 230bcb2dfaeSJed Brown- Julia and Rust interfaces added, providing a nearly 1-1 correspondence with the C interface, plus some convenience features. 231bcb2dfaeSJed Brown- Static libraries can be built with `make STATIC=1` and the pkg-config file is installed accordingly. 232bcb2dfaeSJed Brown- Add {c:func}`CeedOperatorLinearAssembleSymbolic` and {c:func}`CeedOperatorLinearAssemble` to support full assembly of libCEED operators. 233bcb2dfaeSJed Brown 234bcb2dfaeSJed Brown### Performance improvements 235bcb2dfaeSJed Brown 236bcb2dfaeSJed Brown- New HIP MAGMA backends for hipMAGMA library users: `/gpu/hip/magma` and `/gpu/hip/magma/det`. 237bcb2dfaeSJed Brown- New HIP backends for improved tensor basis performance: `/gpu/hip/shared` and `/gpu/hip/gen`. 238bcb2dfaeSJed Brown 239bcb2dfaeSJed Brown### Examples 240bcb2dfaeSJed Brown 241bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with traction boundary conditions and improved Dirichlet boundary conditions. 242bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with Neo-Hookean hyperelasticity in current configuration as well as improved Neo-Hookean hyperelasticity exploring storage vs computation tradeoffs. 243bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` example updated with isentropic traveling vortex test case, an analytical solution to the Euler equations that is useful for testing boundary conditions, discretization stability, and order of accuracy. 244bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` example updated with support for performing convergence study and plotting order of convergence by polynomial degree. 245bcb2dfaeSJed Brown 246bcb2dfaeSJed Brown(v0-7)= 247bcb2dfaeSJed Brown 248bcb2dfaeSJed Brown## v0.7 (Sep 29, 2020) 249bcb2dfaeSJed Brown 250bcb2dfaeSJed Brown### Interface changes 251bcb2dfaeSJed Brown 252bcb2dfaeSJed Brown- Replace limited {code}`CeedInterlaceMode` with more flexible component stride {code}`compstride` in {code}`CeedElemRestriction` constructors. 253bcb2dfaeSJed Brown As a result, the {code}`indices` parameter has been replaced with {code}`offsets` and the {code}`nnodes` parameter has been replaced with {code}`lsize`. 254bcb2dfaeSJed Brown These changes improve support for mixed finite element methods. 255bcb2dfaeSJed Brown- Replace various uses of {code}`Ceed*Get*Status` with {code}`Ceed*Is*` in the backend API to match common nomenclature. 256bcb2dfaeSJed Brown- Replace {code}`CeedOperatorAssembleLinearDiagonal` with {c:func}`CeedOperatorLinearAssembleDiagonal` for clarity. 257bcb2dfaeSJed Brown- Linear Operators can be assembled as point-block diagonal matrices with {c:func}`CeedOperatorLinearAssemblePointBlockDiagonal`, provided in row-major form in a {code}`ncomp` by {code}`ncomp` block per node. 258bcb2dfaeSJed Brown- Diagonal assemble interface changed to accept a {ref}`CeedVector` instead of a pointer to a {ref}`CeedVector` to reduce memory movement when interfacing with calling code. 259bcb2dfaeSJed Brown- Added {c:func}`CeedOperatorLinearAssembleAddDiagonal` and {c:func}`CeedOperatorLinearAssembleAddPointBlockDiagonal` for improved future integration with codes such as MFEM that compose the action of {ref}`CeedOperator`s external to libCEED. 260bcb2dfaeSJed Brown- Added {c:func}`CeedVectorTakeAray` to sync and remove libCEED read/write access to an allocated array and pass ownership of the array to the caller. 261bcb2dfaeSJed Brown This function is recommended over {c:func}`CeedVectorSyncArray` when the {code}`CeedVector` has an array owned by the caller that was set by {c:func}`CeedVectorSetArray`. 262bcb2dfaeSJed Brown- Added {code}`CeedQFunctionContext` object to manage user QFunction context data and reduce copies between device and host memory. 263bcb2dfaeSJed Brown- Added {c:func}`CeedOperatorMultigridLevelCreate`, {c:func}`CeedOperatorMultigridLevelCreateTensorH1`, and {c:func}`CeedOperatorMultigridLevelCreateH1` to facilitate creation of multigrid prolongation, restriction, and coarse grid operators using a common quadrature space. 264bcb2dfaeSJed Brown 265bcb2dfaeSJed Brown### New features 266bcb2dfaeSJed Brown 267bcb2dfaeSJed Brown- New HIP backend: `/gpu/hip/ref`. 268bcb2dfaeSJed Brown- CeedQFunction support for user `CUfunction`s in some backends 269bcb2dfaeSJed Brown 270bcb2dfaeSJed Brown### Performance improvements 271bcb2dfaeSJed Brown 272bcb2dfaeSJed Brown- OCCA backend rebuilt to facilitate future performance enhancements. 273a745612cSJeremy L Thompson- PETSc BPs suite improved to reduce noise due to multiple calls to {code}`mpiexec`. 274bcb2dfaeSJed Brown 275bcb2dfaeSJed Brown### Examples 276bcb2dfaeSJed Brown 277bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with strain energy computation and more flexible boundary conditions. 278bcb2dfaeSJed Brown 279bcb2dfaeSJed Brown### Deprecated backends 280bcb2dfaeSJed Brown 281bcb2dfaeSJed Brown- The `/gpu/cuda/reg` backend has been removed, with its core features moved into `/gpu/cuda/ref` and `/gpu/cuda/shared`. 282bcb2dfaeSJed Brown 283bcb2dfaeSJed Brown(v0-6)= 284bcb2dfaeSJed Brown 285bcb2dfaeSJed Brown## v0.6 (Mar 29, 2020) 286bcb2dfaeSJed Brown 287bcb2dfaeSJed BrownlibCEED v0.6 contains numerous new features and examples, as well as expanded 28813964f07SJed Browndocumentation in [this new website](https://libceed.org). 289bcb2dfaeSJed Brown 290bcb2dfaeSJed Brown### New features 291bcb2dfaeSJed Brown 292bcb2dfaeSJed Brown- New Python interface using [CFFI](https://cffi.readthedocs.io/) provides a nearly 293bcb2dfaeSJed Brown 1-1 correspondence with the C interface, plus some convenience features. For instance, 294bcb2dfaeSJed Brown data stored in the {cpp:type}`CeedVector` structure are available without copy as 295bcb2dfaeSJed Brown {py:class}`numpy.ndarray`. Short tutorials are provided in 296bcb2dfaeSJed Brown [Binder](https://mybinder.org/v2/gh/CEED/libCEED/main?urlpath=lab/tree/examples/tutorials/). 297bcb2dfaeSJed Brown- Linear QFunctions can be assembled as block-diagonal matrices (per quadrature point, 298bcb2dfaeSJed Brown {c:func}`CeedOperatorAssembleLinearQFunction`) or to evaluate the diagonal 299bcb2dfaeSJed Brown ({c:func}`CeedOperatorAssembleLinearDiagonal`). These operations are useful for 300bcb2dfaeSJed Brown preconditioning ingredients and are used in the libCEED's multigrid examples. 301bcb2dfaeSJed Brown- The inverse of separable operators can be obtained using 302bcb2dfaeSJed Brown {c:func}`CeedOperatorCreateFDMElementInverse` and applied with 303bcb2dfaeSJed Brown {c:func}`CeedOperatorApply`. This is a useful preconditioning ingredient, 304bcb2dfaeSJed Brown especially for Laplacians and related operators. 305bcb2dfaeSJed Brown- New functions: {c:func}`CeedVectorNorm`, {c:func}`CeedOperatorApplyAdd`, 306bcb2dfaeSJed Brown {c:func}`CeedQFunctionView`, {c:func}`CeedOperatorView`. 307bcb2dfaeSJed Brown- Make public accessors for various attributes to facilitate writing composable code. 308bcb2dfaeSJed Brown- New backend: `/cpu/self/memcheck/serial`. 309bcb2dfaeSJed Brown- QFunctions using variable-length array (VLA) pointer constructs can be used with CUDA 310bcb2dfaeSJed Brown backends. (Single source is coming soon for OCCA backends.) 311bcb2dfaeSJed Brown- Fix some missing edge cases in CUDA backend. 312bcb2dfaeSJed Brown 313bcb2dfaeSJed Brown### Performance Improvements 314bcb2dfaeSJed Brown 315bcb2dfaeSJed Brown- MAGMA backend performance optimization and non-tensor bases. 316bcb2dfaeSJed Brown- No-copy optimization in {c:func}`CeedOperatorApply`. 317bcb2dfaeSJed Brown 318bcb2dfaeSJed Brown### Interface changes 319bcb2dfaeSJed Brown 320bcb2dfaeSJed Brown- Replace {code}`CeedElemRestrictionCreateIdentity` and 321bcb2dfaeSJed Brown {code}`CeedElemRestrictionCreateBlocked` with more flexible 322bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionCreateStrided` and 323bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionCreateBlockedStrided`. 324bcb2dfaeSJed Brown- Add arguments to {c:func}`CeedQFunctionCreateIdentity`. 325bcb2dfaeSJed Brown- Replace ambiguous uses of {cpp:enum}`CeedTransposeMode` for L-vector identification 326bcb2dfaeSJed Brown with {cpp:enum}`CeedInterlaceMode`. This is now an attribute of the 327bcb2dfaeSJed Brown {cpp:type}`CeedElemRestriction` (see {c:func}`CeedElemRestrictionCreate`) and no 328bcb2dfaeSJed Brown longer passed as `lmode` arguments to {c:func}`CeedOperatorSetField` and 329bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionApply`. 330bcb2dfaeSJed Brown 331bcb2dfaeSJed Brown### Examples 332bcb2dfaeSJed Brown 333bcb2dfaeSJed BrownlibCEED-0.6 contains greatly expanded examples with {ref}`new documentation <Examples>`. 334bcb2dfaeSJed BrownNotable additions include: 335bcb2dfaeSJed Brown 336bcb2dfaeSJed Brown- Standalone {ref}`ex2-surface` ({file}`examples/ceed/ex2-surface`): compute the area of 337bcb2dfaeSJed Brown a domain in 1, 2, and 3 dimensions by applying a Laplacian. 338bcb2dfaeSJed Brown 339bcb2dfaeSJed Brown- PETSc {ref}`example-petsc-area` ({file}`examples/petsc/area.c`): computes surface area 340bcb2dfaeSJed Brown of domains (like the cube and sphere) by direct integration on a surface mesh; 341bcb2dfaeSJed Brown demonstrates geometric dimension different from topological dimension. 342bcb2dfaeSJed Brown 343bcb2dfaeSJed Brown- PETSc {ref}`example-petsc-bps`: 344bcb2dfaeSJed Brown 345bcb2dfaeSJed Brown - {file}`examples/petsc/bpsraw.c` (formerly `bps.c`): transparent CUDA support. 346bcb2dfaeSJed Brown - {file}`examples/petsc/bps.c` (formerly `bpsdmplex.c`): performance improvements 347bcb2dfaeSJed Brown and transparent CUDA support. 348bcb2dfaeSJed Brown - {ref}`example-petsc-bps-sphere` ({file}`examples/petsc/bpssphere.c`): 349bcb2dfaeSJed Brown generalizations of all CEED BPs to the surface of the sphere; demonstrates geometric 350bcb2dfaeSJed Brown dimension different from topological dimension. 351bcb2dfaeSJed Brown 352bcb2dfaeSJed Brown- {ref}`example-petsc-multigrid` ({file}`examples/petsc/multigrid.c`): new p-multigrid 353bcb2dfaeSJed Brown solver with algebraic multigrid coarse solve. 354bcb2dfaeSJed Brown 355bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` ({file}`examples/fluids/navierstokes.c`; formerly 356bcb2dfaeSJed Brown `examples/navier-stokes`): unstructured grid support (using PETSc's `DMPlex`), 357bcb2dfaeSJed Brown implicit time integration, SU/SUPG stabilization, free-slip boundary conditions, and 358bcb2dfaeSJed Brown quasi-2D computational domain support. 359bcb2dfaeSJed Brown 360bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` ({file}`examples/solids/elasticity.c`): new solver for 361bcb2dfaeSJed Brown linear elasticity, small-strain hyperelasticity, and globalized finite-strain 362bcb2dfaeSJed Brown hyperelasticity using p-multigrid with algebraic multigrid coarse solve. 363bcb2dfaeSJed Brown 364bcb2dfaeSJed Brown(v0-5)= 365bcb2dfaeSJed Brown 366bcb2dfaeSJed Brown## v0.5 (Sep 18, 2019) 367bcb2dfaeSJed Brown 368bcb2dfaeSJed BrownFor this release, several improvements were made. Two new CUDA backends were added to 369bcb2dfaeSJed Brownthe family of backends, of which, the new `cuda-gen` backend achieves state-of-the-art 370bcb2dfaeSJed Brownperformance using single-source {ref}`CeedQFunction`. From this release, users 371bcb2dfaeSJed Browncan define Q-Functions in a single source code independently of the targeted backend 372bcb2dfaeSJed Brownwith the aid of a new macro `CEED QFUNCTION` to support JIT (Just-In-Time) and CPU 373bcb2dfaeSJed Browncompilation of the user provided {ref}`CeedQFunction` code. To allow a unified 374bcb2dfaeSJed Browndeclaration, the {ref}`CeedQFunction` API has undergone a slight change: 375bcb2dfaeSJed Brownthe `QFunctionField` parameter `ncomp` has been changed to `size`. This change 376bcb2dfaeSJed Brownrequires setting the previous value of `ncomp` to `ncomp*dim` when adding a 377bcb2dfaeSJed Brown`QFunctionField` with eval mode `CEED EVAL GRAD`. 378bcb2dfaeSJed Brown 379bcb2dfaeSJed BrownAdditionally, new CPU backends 380bcb2dfaeSJed Brownwere included in this release, such as the `/cpu/self/opt/*` backends (which are 381bcb2dfaeSJed Brownwritten in pure C and use partial **E-vectors** to improve performance) and the 382bcb2dfaeSJed Brown`/cpu/self/ref/memcheck` backend (which relies upon the 383bcb2dfaeSJed Brown[Valgrind](http://valgrind.org/) Memcheck tool to help verify that user 384bcb2dfaeSJed Brown{ref}`CeedQFunction` have no undefined values). 385bcb2dfaeSJed BrownThis release also included various performance improvements, bug fixes, new examples, 386bcb2dfaeSJed Brownand improved tests. Among these improvements, vectorized instructions for 387bcb2dfaeSJed Brown{ref}`CeedQFunction` code compiled for CPU were enhanced by using `CeedPragmaSIMD` 388bcb2dfaeSJed Browninstead of `CeedPragmaOMP`, implementation of a {ref}`CeedQFunction` gallery and 389bcb2dfaeSJed Brownidentity Q-Functions were introduced, and the PETSc benchmark problems were expanded 390bcb2dfaeSJed Brownto include unstructured meshes handling were. For this expansion, the prior version of 391bcb2dfaeSJed Brownthe PETSc BPs, which only included data associated with structured geometries, were 392bcb2dfaeSJed Brownrenamed `bpsraw`, and the new version of the BPs, which can handle data associated 393bcb2dfaeSJed Brownwith any unstructured geometry, were called `bps`. Additionally, other benchmark 394bcb2dfaeSJed Brownproblems, namely BP2 and BP4 (the vector-valued versions of BP1 and BP3, respectively), 395bcb2dfaeSJed Brownand BP5 and BP6 (the collocated versions---for which the quadrature points are the same 396bcb2dfaeSJed Brownas the Gauss Lobatto nodes---of BP3 and BP4 respectively) were added to the PETSc 397bcb2dfaeSJed Brownexamples. Furthermoew, another standalone libCEED example, called `ex2`, which 398bcb2dfaeSJed Browncomputes the surface area of a given mesh was added to this release. 399bcb2dfaeSJed Brown 400bcb2dfaeSJed BrownBackends available in this release: 401bcb2dfaeSJed Brown 40268e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 40368e843eeSJed Brown|--------------------------|-----------------------------------------------------| 40468e843eeSJed Brown| `/cpu/self/ref/serial` | Serial reference implementation | 40568e843eeSJed Brown| `/cpu/self/ref/blocked` | Blocked reference implementation | 40668e843eeSJed Brown| `/cpu/self/ref/memcheck` | Memcheck backend, undefined value checks | 40768e843eeSJed Brown| `/cpu/self/opt/serial` | Serial optimized C implementation | 40868e843eeSJed Brown| `/cpu/self/opt/blocked` | Blocked optimized C implementation | 40968e843eeSJed Brown| `/cpu/self/avx/serial` | Serial AVX implementation | 41068e843eeSJed Brown| `/cpu/self/avx/blocked` | Blocked AVX implementation | 41168e843eeSJed Brown| `/cpu/self/xsmm/serial` | Serial LIBXSMM implementation | 41268e843eeSJed Brown| `/cpu/self/xsmm/blocked` | Blocked LIBXSMM implementation | 41368e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 41468e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 41568e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 41668e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 41768e843eeSJed Brown| `/gpu/cuda/ref` | Reference pure CUDA kernels | 41868e843eeSJed Brown| `/gpu/cuda/reg` | Pure CUDA kernels using one thread per element | 41968e843eeSJed Brown| `/gpu/cuda/shared` | Optimized pure CUDA kernels using shared memory | 42068e843eeSJed Brown| `/gpu/cuda/gen` | Optimized pure CUDA kernels using code generation | 42168e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 422bcb2dfaeSJed Brown 423bcb2dfaeSJed BrownExamples available in this release: 424bcb2dfaeSJed Brown 42568e843eeSJed Brown:::{list-table} 42668e843eeSJed Brown:header-rows: 1 42768e843eeSJed Brown:widths: auto 42868e843eeSJed Brown* - User code 42968e843eeSJed Brown - Example 43068e843eeSJed Brown* - `ceed` 43168e843eeSJed Brown - * ex1 (volume) 43268e843eeSJed Brown * ex2 (surface) 43368e843eeSJed Brown* - `mfem` 43468e843eeSJed Brown - * BP1 (scalar mass operator) 43568e843eeSJed Brown * BP3 (scalar Laplace operator) 43668e843eeSJed Brown* - `petsc` 43768e843eeSJed Brown - * BP1 (scalar mass operator) 43868e843eeSJed Brown * BP2 (vector mass operator) 43968e843eeSJed Brown * BP3 (scalar Laplace operator) 44068e843eeSJed Brown * BP4 (vector Laplace operator) 44168e843eeSJed Brown * BP5 (collocated scalar Laplace operator) 44268e843eeSJed Brown * BP6 (collocated vector Laplace operator) 44368e843eeSJed Brown * Navier-Stokes 44468e843eeSJed Brown* - `nek5000` 44568e843eeSJed Brown - * BP1 (scalar mass operator) 44668e843eeSJed Brown * BP3 (scalar Laplace operator) 44768e843eeSJed Brown::: 448bcb2dfaeSJed Brown 449bcb2dfaeSJed Brown(v0-4)= 450bcb2dfaeSJed Brown 451bcb2dfaeSJed Brown## v0.4 (Apr 1, 2019) 452bcb2dfaeSJed Brown 453bcb2dfaeSJed BrownlibCEED v0.4 was made again publicly available in the second full CEED software 454bcb2dfaeSJed Browndistribution, release CEED 2.0. This release contained notable features, such as 455bcb2dfaeSJed Brownfour new CPU backends, two new GPU backends, CPU backend optimizations, initial 456bcb2dfaeSJed Brownsupport for operator composition, performance benchmarking, and a Navier-Stokes demo. 457bcb2dfaeSJed BrownThe new CPU backends in this release came in two families. The `/cpu/self/*/serial` 458bcb2dfaeSJed Brownbackends process one element at a time and are intended for meshes with a smaller number 459bcb2dfaeSJed Brownof high order elements. The `/cpu/self/*/blocked` backends process blocked batches of 460bcb2dfaeSJed Browneight interlaced elements and are intended for meshes with higher numbers of elements. 461bcb2dfaeSJed BrownThe `/cpu/self/avx/*` backends rely upon AVX instructions to provide vectorized CPU 462bcb2dfaeSJed Brownperformance. The `/cpu/self/xsmm/*` backends rely upon the 463bcb2dfaeSJed Brown[LIBXSMM](http://github.com/hfp/libxsmm) package to provide vectorized CPU 464bcb2dfaeSJed Brownperformance. The `/gpu/cuda/*` backends provide GPU performance strictly using CUDA. 465bcb2dfaeSJed BrownThe `/gpu/cuda/ref` backend is a reference CUDA backend, providing reasonable 466bcb2dfaeSJed Brownperformance for most problem configurations. The `/gpu/cuda/reg` backend uses a simple 467bcb2dfaeSJed Brownparallelization approach, where each thread treats a finite element. Using just in time 468bcb2dfaeSJed Browncompilation, provided by nvrtc (NVidia Runtime Compiler), and runtime parameters, this 469bcb2dfaeSJed Brownbackend unroll loops and map memory address to registers. The `/gpu/cuda/reg` backend 470bcb2dfaeSJed Brownachieve good peak performance for 1D, 2D, and low order 3D problems, but performance 471bcb2dfaeSJed Browndeteriorates very quickly when threads run out of registers. 472bcb2dfaeSJed Brown 473bcb2dfaeSJed BrownA new explicit time-stepping Navier-Stokes solver was added to the family of libCEED 474bcb2dfaeSJed Brownexamples in the `examples/petsc` directory (see {ref}`example-petsc-navier-stokes`). 475bcb2dfaeSJed BrownThis example solves the time-dependent Navier-Stokes equations of compressible gas 476bcb2dfaeSJed Browndynamics in a static Eulerian three-dimensional frame, using structured high-order 477bcb2dfaeSJed Brownfinite/spectral element spatial discretizations and explicit high-order time-stepping 478bcb2dfaeSJed Brown(available in PETSc). Moreover, the Navier-Stokes example was developed using PETSc, 479bcb2dfaeSJed Brownso that the pointwise physics (defined at quadrature points) is separated from the 480bcb2dfaeSJed Brownparallelization and meshing concerns. 481bcb2dfaeSJed Brown 482bcb2dfaeSJed BrownBackends available in this release: 483bcb2dfaeSJed Brown 48468e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 48568e843eeSJed Brown|--------------------------|-----------------------------------------------------| 48668e843eeSJed Brown| `/cpu/self/ref/serial` | Serial reference implementation | 48768e843eeSJed Brown| `/cpu/self/ref/blocked` | Blocked reference implementation | 48868e843eeSJed Brown| `/cpu/self/tmpl` | Backend template, defaults to `/cpu/self/blocked` | 48968e843eeSJed Brown| `/cpu/self/avx/serial` | Serial AVX implementation | 49068e843eeSJed Brown| `/cpu/self/avx/blocked` | Blocked AVX implementation | 49168e843eeSJed Brown| `/cpu/self/xsmm/serial` | Serial LIBXSMM implementation | 49268e843eeSJed Brown| `/cpu/self/xsmm/blocked` | Blocked LIBXSMM implementation | 49368e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 49468e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 49568e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 49668e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 49768e843eeSJed Brown| `/gpu/cuda/ref` | Reference pure CUDA kernels | 49868e843eeSJed Brown| `/gpu/cuda/reg` | Pure CUDA kernels using one thread per element | 49968e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 500bcb2dfaeSJed Brown 501bcb2dfaeSJed BrownExamples available in this release: 502bcb2dfaeSJed Brown 50368e843eeSJed Brown:::{list-table} 50468e843eeSJed Brown:header-rows: 1 50568e843eeSJed Brown:widths: auto 50668e843eeSJed Brown* - User code 50768e843eeSJed Brown - Example 50868e843eeSJed Brown* - `ceed` 50968e843eeSJed Brown - * ex1 (volume) 51068e843eeSJed Brown* - `mfem` 51168e843eeSJed Brown - * BP1 (scalar mass operator) 51268e843eeSJed Brown * BP3 (scalar Laplace operator) 51368e843eeSJed Brown* - `petsc` 51468e843eeSJed Brown - * BP1 (scalar mass operator) 51568e843eeSJed Brown * BP3 (scalar Laplace operator) 51668e843eeSJed Brown * Navier-Stokes 51768e843eeSJed Brown* - `nek5000` 51868e843eeSJed Brown - * BP1 (scalar mass operator) 51968e843eeSJed Brown * BP3 (scalar Laplace operator) 52068e843eeSJed Brown::: 521bcb2dfaeSJed Brown 522bcb2dfaeSJed Brown(v0-3)= 523bcb2dfaeSJed Brown 524bcb2dfaeSJed Brown## v0.3 (Sep 30, 2018) 525bcb2dfaeSJed Brown 526bcb2dfaeSJed BrownNotable features in this release include active/passive field interface, support for 527bcb2dfaeSJed Brownnon-tensor bases, backend optimization, and improved Fortran interface. This release 528bcb2dfaeSJed Brownalso focused on providing improved continuous integration, and many new tests with code 529bcb2dfaeSJed Browncoverage reports of about 90%. This release also provided a significant change to the 530bcb2dfaeSJed Brownpublic interface: a {ref}`CeedQFunction` can take any number of named input and output 531bcb2dfaeSJed Brownarguments while {ref}`CeedOperator` connects them to the actual data, which may be 532bcb2dfaeSJed Brownsupplied explicitly to `CeedOperatorApply()` (active) or separately via 533bcb2dfaeSJed Brown`CeedOperatorSetField()` (passive). This interface change enables reusable libraries 534bcb2dfaeSJed Brownof CeedQFunctions and composition of block solvers constructed using 535bcb2dfaeSJed Brown{ref}`CeedOperator`. A concept of blocked restriction was added to this release and 536bcb2dfaeSJed Brownused in an optimized CPU backend. Although this is typically not visible to the user, 537bcb2dfaeSJed Brownit enables effective use of arbitrary-length SIMD while maintaining cache locality. 538bcb2dfaeSJed BrownThis CPU backend also implements an algebraic factorization of tensor product gradients 539bcb2dfaeSJed Brownto perform fewer operations than standard application of interpolation and 540bcb2dfaeSJed Browndifferentiation from nodes to quadrature points. This algebraic formulation 541bcb2dfaeSJed Brownautomatically supports non-polynomial and non-interpolatory bases, thus is more general 542bcb2dfaeSJed Brownthan the more common derivation in terms of Lagrange polynomials on the quadrature points. 543bcb2dfaeSJed Brown 544bcb2dfaeSJed BrownBackends available in this release: 545bcb2dfaeSJed Brown 54668e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 54768e843eeSJed Brown|-------------------------|-----------------------------------------------------| 54868e843eeSJed Brown| `/cpu/self/blocked` | Blocked reference implementation | 54968e843eeSJed Brown| `/cpu/self/ref` | Serial reference implementation | 55068e843eeSJed Brown| `/cpu/self/tmpl` | Backend template, defaults to `/cpu/self/blocked` | 55168e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 55268e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 55368e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 55468e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 55568e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 556bcb2dfaeSJed Brown 557bcb2dfaeSJed BrownExamples available in this release: 558bcb2dfaeSJed Brown 55968e843eeSJed Brown:::{list-table} 56068e843eeSJed Brown:header-rows: 1 56168e843eeSJed Brown:widths: auto 56268e843eeSJed Brown* - User code 56368e843eeSJed Brown - Example 56468e843eeSJed Brown* - `ceed` 56568e843eeSJed Brown - * ex1 (volume) 56668e843eeSJed Brown* - `mfem` 56768e843eeSJed Brown - * BP1 (scalar mass operator) 56868e843eeSJed Brown * BP3 (scalar Laplace operator) 56968e843eeSJed Brown* - `petsc` 57068e843eeSJed Brown - * BP1 (scalar mass operator) 57168e843eeSJed Brown * BP3 (scalar Laplace operator) 57268e843eeSJed Brown* - `nek5000` 57368e843eeSJed Brown - * BP1 (scalar mass operator) 57468e843eeSJed Brown * BP3 (scalar Laplace operator) 57568e843eeSJed Brown::: 576bcb2dfaeSJed Brown 577bcb2dfaeSJed Brown(v0-21)= 578bcb2dfaeSJed Brown 579bcb2dfaeSJed Brown## v0.21 (Sep 30, 2018) 580bcb2dfaeSJed Brown 581bcb2dfaeSJed BrownA MAGMA backend (which relies upon the 582bcb2dfaeSJed Brown[MAGMA](https://bitbucket.org/icl/magma) package) was integrated in libCEED for this 583bcb2dfaeSJed Brownrelease. This initial integration set up the framework of using MAGMA and provided the 584bcb2dfaeSJed BrownlibCEED functionality through MAGMA kernels as one of libCEED’s computational backends. 585bcb2dfaeSJed BrownAs any other backend, the MAGMA backend provides extended basic data structures for 586bcb2dfaeSJed Brown{ref}`CeedVector`, {ref}`CeedElemRestriction`, and {ref}`CeedOperator`, and implements 587bcb2dfaeSJed Brownthe fundamental CEED building blocks to work with the new data structures. 588bcb2dfaeSJed BrownIn general, the MAGMA-specific data structures keep the libCEED pointers to CPU data 589bcb2dfaeSJed Brownbut also add corresponding device (e.g., GPU) pointers to the data. Coherency is handled 590bcb2dfaeSJed Browninternally, and thus seamlessly to the user, through the functions/methods that are 591bcb2dfaeSJed Brownprovided to support them. 592bcb2dfaeSJed Brown 593bcb2dfaeSJed BrownBackends available in this release: 594bcb2dfaeSJed Brown 59568e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 59668e843eeSJed Brown|-------------------------|---------------------------------| 59768e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 59868e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 59968e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 60068e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 60168e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 60268e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 603bcb2dfaeSJed Brown 604bcb2dfaeSJed BrownExamples available in this release: 605bcb2dfaeSJed Brown 60668e843eeSJed Brown:::{list-table} 60768e843eeSJed Brown:header-rows: 1 60868e843eeSJed Brown:widths: auto 60968e843eeSJed Brown* - User code 61068e843eeSJed Brown - Example 61168e843eeSJed Brown* - `ceed` 61268e843eeSJed Brown - * ex1 (volume) 61368e843eeSJed Brown* - `mfem` 61468e843eeSJed Brown - * BP1 (scalar mass operator) 61568e843eeSJed Brown * BP3 (scalar Laplace operator) 61668e843eeSJed Brown* - `petsc` 61768e843eeSJed Brown - * BP1 (scalar mass operator) 61868e843eeSJed Brown* - `nek5000` 61968e843eeSJed Brown - * BP1 (scalar mass operator) 62068e843eeSJed Brown::: 621bcb2dfaeSJed Brown 622bcb2dfaeSJed Brown(v0-2)= 623bcb2dfaeSJed Brown 624bcb2dfaeSJed Brown## v0.2 (Mar 30, 2018) 625bcb2dfaeSJed Brown 626bcb2dfaeSJed BrownlibCEED was made publicly available the first full CEED software distribution, release 627bcb2dfaeSJed BrownCEED 1.0. The distribution was made available using the Spack package manager to provide 628bcb2dfaeSJed Browna common, easy-to-use build environment, where the user can build the CEED distribution 629bcb2dfaeSJed Brownwith all dependencies. This release included a new Fortran interface for the library. 630bcb2dfaeSJed BrownThis release also contained major improvements in the OCCA backend (including a new 631bcb2dfaeSJed Brown`/ocl/occa` backend) and new examples. The standalone libCEED example was modified to 632bcb2dfaeSJed Browncompute the volume volume of a given mesh (in 1D, 2D, or 3D) and placed in an 633bcb2dfaeSJed Brown`examples/ceed` subfolder. A new `mfem` example to perform BP3 (with the application 634bcb2dfaeSJed Brownof the Laplace operator) was also added to this release. 635bcb2dfaeSJed Brown 636bcb2dfaeSJed BrownBackends available in this release: 637bcb2dfaeSJed Brown 63868e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 63968e843eeSJed Brown|-------------------------|---------------------------------| 64068e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 64168e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 64268e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 64368e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 64468e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 645bcb2dfaeSJed Brown 646bcb2dfaeSJed BrownExamples available in this release: 647bcb2dfaeSJed Brown 64868e843eeSJed Brown:::{list-table} 64968e843eeSJed Brown:header-rows: 1 65068e843eeSJed Brown:widths: auto 65168e843eeSJed Brown* - User code 65268e843eeSJed Brown - Example 65368e843eeSJed Brown* - `ceed` 65468e843eeSJed Brown - * ex1 (volume) 65568e843eeSJed Brown* - `mfem` 65668e843eeSJed Brown - * BP1 (scalar mass operator) 65768e843eeSJed Brown * BP3 (scalar Laplace operator) 65868e843eeSJed Brown* - `petsc` 65968e843eeSJed Brown - * BP1 (scalar mass operator) 66068e843eeSJed Brown* - `nek5000` 66168e843eeSJed Brown - * BP1 (scalar mass operator) 66268e843eeSJed Brown::: 663bcb2dfaeSJed Brown 664bcb2dfaeSJed Brown(v0-1)= 665bcb2dfaeSJed Brown 666bcb2dfaeSJed Brown## v0.1 (Jan 3, 2018) 667bcb2dfaeSJed Brown 668bcb2dfaeSJed BrownInitial low-level API of the CEED project. The low-level API provides a set of Finite 669bcb2dfaeSJed BrownElements kernels and components for writing new low-level kernels. Examples include: 670bcb2dfaeSJed Brownvector and sparse linear algebra, element matrix assembly over a batch of elements, 671bcb2dfaeSJed Brownpartial assembly and action for efficient high-order operators like mass, diffusion, 672bcb2dfaeSJed Brownadvection, etc. The main goal of the low-level API is to establish the basis for the 673bcb2dfaeSJed Brownhigh-level API. Also, identifying such low-level kernels and providing a reference 674bcb2dfaeSJed Brownimplementation for them serves as the basis for specialized backend implementations. 675bcb2dfaeSJed BrownThis release contained several backends: `/cpu/self`, and backends which rely upon the 676bcb2dfaeSJed Brown[OCCA](http://github.com/libocca/occa) package, such as `/cpu/occa`, 677bcb2dfaeSJed Brown`/gpu/occa`, and `/omp/occa`. 678bcb2dfaeSJed BrownIt also included several examples, in the `examples` folder: 679bcb2dfaeSJed BrownA standalone code that shows the usage of libCEED (with no external 680bcb2dfaeSJed Browndependencies) to apply the Laplace operator, `ex1`; an `mfem` example to perform BP1 681bcb2dfaeSJed Brown(with the application of the mass operator); and a `petsc` example to perform BP1 682bcb2dfaeSJed Brown(with the application of the mass operator). 683bcb2dfaeSJed Brown 684bcb2dfaeSJed BrownBackends available in this release: 685bcb2dfaeSJed Brown 68668e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 68768e843eeSJed Brown|-------------------------|---------------------------------| 68868e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 68968e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 69068e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 69168e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 692bcb2dfaeSJed Brown 693bcb2dfaeSJed BrownExamples available in this release: 694bcb2dfaeSJed Brown 695bcb2dfaeSJed Brown| User code | Example | 69668e843eeSJed Brown|-----------------------|-----------------------------------| 69768e843eeSJed Brown| `ceed` | ex1 (scalar Laplace operator) | 69868e843eeSJed Brown| `mfem` | BP1 (scalar mass operator) | 69968e843eeSJed Brown| `petsc` | BP1 (scalar mass operator) | 700bcb2dfaeSJed Brown``` 701