1bcb2dfaeSJed Brown# Changes/Release Notes 2bcb2dfaeSJed Brown 3bcb2dfaeSJed BrownOn this page we provide a summary of the main API changes, new features and examples 4bcb2dfaeSJed Brownfor each release of libCEED. 5bcb2dfaeSJed Brown 6bcb2dfaeSJed Brown(main)= 7bcb2dfaeSJed Brown 8bcb2dfaeSJed Brown## Current `main` branch 9bcb2dfaeSJed Brown 107e7773b5SJeremy L Thompson### Interface changes 117e7773b5SJeremy L Thompson 126e15d496SJeremy L Thompson- Added {c:func}`CeedQFunctionSetUserFlopsEstimate` and {c:func}`CeedOperatorGetFlopsEstimate` to facilitate estimating FLOPs in operator application. 136e15d496SJeremy L Thompson 14*5766aa57SJeremy L Thompson### Bugfix 15*5766aa57SJeremy L Thompson 16*5766aa57SJeremy L Thompson- Install JiT source files in install directory to fix GPU functionality for installed libCEED. 17*5766aa57SJeremy L Thompson 18667e613fSJeremy L Thompson(v0-10)= 19667e613fSJeremy L Thompson 203ed90579SJeremy L Thompson## v0.10 (Mar 21, 2022) 21667e613fSJeremy L Thompson 22667e613fSJeremy L Thompson### Interface changes 23667e613fSJeremy L Thompson 247e7773b5SJeremy L Thompson- Update {c:func}`CeedQFunctionGetFields` and {c:func}`CeedOperatorGetFields` to include number of fields. 25ce4822f6SJeremy L Thompson- Promote to the public API: QFunction and Operator field objects, `CeedQFunctionField` and `CeedOperatorField`, and associated getters, {c:func}`CeedQFunctionGetFields`; {c:func}`CeedQFunctionFieldGetName`; {c:func}`CeedQFunctionFieldGetSize`; {c:func}`CeedQFunctionFieldGetEvalMode`; {c:func}`CeedOperatorGetFields`; {c:func}`CeedOperatorFieldGetElemRestriction`; {c:func}`CeedOperatorFieldGetBasis`; and {c:func}`CeedOperatorFieldGetVector`. 26f04ea552SJeremy L Thompson- Clarify and document conditions where `CeedQFunction` and `CeedOperator` become immutable and no further fields or suboperators can be added. 2770a7ffb3SJeremy L Thompson- Add {c:func}`CeedOperatorLinearAssembleQFunctionBuildOrUpdate` to reduce object creation overhead in assembly of CeedOperator preconditioning ingredients. 284db537f9SJeremy L Thompson- Promote {c:func}`CeedOperatorCheckReady`to the public API to facilitate interactive interfaces. 29dcc1e3ecSJeremy L Thompson- Warning added when compiling OCCA backend to alert users that this backend is experimental. 309a1d3511SJeremy L Thompson- `ceed-backend.h`, `ceed-hash.h`, and `ceed-khash.h` removed. Users should use `ceed/backend.h`, `ceed/hash.h`, and `ceed/khash.h`. 3143e1b16fSJeremy L Thompson- Added {c:func}`CeedQFunctionGetKernelName`; refactored {c:func}`CeedQFunctionGetSourcePath` to exclude function kernel name. 329c774eddSJeremy L Thompson- Clarify documentation for {c:func}`CeedVectorTakeArray`; this function will error if {c:func}`CeedVectorSetArray` with `copy_mode == CEED_USE_POINTER` was not previously called for the corresponding `CeedMemType`. 339c774eddSJeremy L Thompson- Added {c:func}`CeedVectorGetArrayWrite` that allows access to uninitalized arrays; require initalized data for {c:func}`CeedVectorGetArray`. 34c38440baSJed Brown- Added {c:func}`CeedQFunctionContextRegisterDouble` and {c:func}`CeedQFunctionContextRegisterInt32` with {c:func}`CeedQFunctionContextSetDouble` and {c:func}`CeedQFunctionContextSetInt32` to facilitate easy updating of {c:struct}`CeedQFunctionContext` data by user defined field names. 35cdf32b93SJeremy L Thompson- Added {c:func}`CeedQFunctionContextGetFieldDescriptions` to retreive user defined descriptions of fields that are registered with `CeedQFunctionContextRegister*`. 367a06ec9fSJeremy L Thompson- Renamed `CeedElemTopology` entries for clearer namespacing between libCEED enums. 37f4f98f9dSJeremy L Thompson- Added type `CeedSize` equivalent to `ptrdiff_t` for array sizes in {c:func}`CeedVectorCreate`, {c:func}`CeedVectorGetLength`, `CeedElemRestrictionCreate*`, {c:func}`CeedElemRestrictionGetLVectorSize`, and {c:func}`CeedOperatorLinearAssembleSymbolic`. This is a breaking change. 388b919e6bSJeremy L Thompson- Added {c:func}`CeedOperatorSetQFunctionUpdated` to facilitate QFunction data re-use between operators sharing the same quadrature space, such as in a multigrid hierarchy. 39c9366a6bSJeremy L Thompson- Added {c:func}`CeedOperatorGetActiveVectorLengths` to get shape of CeedOperator. 407e7773b5SJeremy L Thompson 41f479eb23SJeremy L Thompson### New features 42f479eb23SJeremy L Thompson 43f479eb23SJeremy L Thompson- `CeedScalar` can now be set as `float` or `double` at compile time. 4430601ac0SJeremy L Thompson- Added JiT utilities in `ceed/jit-tools.h` to reduce duplicated code in GPU backends. 45fb3c7d02SJeremy L Thompson- Added support for JiT of QFunctions with `#include "relative/path/local-file.h"` statements for additional local files. Note that files included with `""` are searched relative to the current file first, then by compiler paths (as with `<>` includes). To use this feature, one should adhere to relative paths only, not compiler flags like `-I`, which the JiT will not be aware of. 4623dfbf5bSJeremy L Thompson- Remove need to guard library headers in QFunction source for code generation backends. 473f21f6b1SJeremy L Thompson- `CeedDebugEnv()` macro created to provide debugging outputs when Ceed context is not present. 48f7e22acaSJeremy L Thompson- Added {c:func}`CeedStringAllocCopy` to reduce repeated code for copying strings internally. 493451974fSJeremy L Thompson- Added {c:func}`CeedPathConcatenate` to facilitate loading kernel source files with a path relative to the current file. 507a06ec9fSJeremy L Thompson- Added support for non-tensor H(div) elements, to include CPU backend implementations and {c:func}`CeedBasisCreateHdiv` convenience constructor. 51d34e270fSJeremy L Thompson- Added {c:func}`CeedQFunctionSetContextWritable` and read-only access to `CeedQFunctionContext` data as an optional feature to improve GPU performance. By default, calling the `CeedQFunctionUser` during {c:func}`CeedQFunctionApply` is assumed to write into the `CeedQFunctionContext` data, consistent with the previous behavior. Note that if a user asserts that their `CeedQFunctionUser` does not write into the `CeedQFunctionContext` data, they are responsible for the validity of this assertion. 5259ad764aSnbeams- Added support for element matrix assembly in GPU backends. 53f479eb23SJeremy L Thompson 54bcb2dfaeSJed Brown### Maintainability 55bcb2dfaeSJed Brown 56bcb2dfaeSJed Brown- Refactored preconditioner support internally to facilitate future development and improve GPU completeness/test coverage. 57db52d626SJeremy L Thompson- `Include-what-you-use` makefile target added as `make iwyu`. 58bf4cb664SJeremy L Thompson- Create backend constant `CEED_FIELD_MAX` to reduce magic numbers in codebase. 593451974fSJeremy L Thompson- Put GPU JiTed kernel source code into separate files. 60f9996dfdSJeremy L Thompson- Dropped legacy version support in PETSc based examples to better utilize PETSc DMPlex and Mat updates to support libCEED; current minimum PETSc version for the examples is v3.17. 61bcb2dfaeSJed Brown 62bcb2dfaeSJed Brown(v0-9)= 63bcb2dfaeSJed Brown 64bcb2dfaeSJed Brown## v0.9 (Jul 6, 2021) 65bcb2dfaeSJed Brown 66bcb2dfaeSJed Brown### Interface changes 67bcb2dfaeSJed Brown 68bcb2dfaeSJed Brown- Minor modification in error handling macro to silence pedantic warnings when compiling with Clang, but no functional impact. 69bcb2dfaeSJed Brown 70bcb2dfaeSJed Brown### New features 71bcb2dfaeSJed Brown 72bcb2dfaeSJed Brown- Add {c:func}`CeedVectorAXPY` and {c:func}`CeedVectorPointwiseMult` as a convenience for stand-alone testing and internal use. 73bcb2dfaeSJed Brown- Add `CEED_QFUNCTION_HELPER` macro to properly annotate QFunction helper functions for code generation backends. 74bcb2dfaeSJed Brown- Add `CeedPragmaOptimizeOff` macro for code that is sensitive to floating point errors from fast math optimizations. 75bcb2dfaeSJed Brown- Rust support: split `libceed-sys` crate out of `libceed` and [publish both on crates.io](https://crates.io/crates/libceed). 76bcb2dfaeSJed Brown 77bcb2dfaeSJed Brown### Performance improvements 78bcb2dfaeSJed Brown 79bcb2dfaeSJed Brown### Examples 80bcb2dfaeSJed Brown 81bcb2dfaeSJed Brown- Solid mechanics mini-app updated to explore the performance impacts of various formulations in the initial and current configurations. 82bcb2dfaeSJed Brown- Fluid mechanics example adds GPU support and improves modularity. 83bcb2dfaeSJed Brown 84bcb2dfaeSJed Brown### Deprecated backends 85bcb2dfaeSJed Brown 86bcb2dfaeSJed Brown- The `/cpu/self/tmpl` and `/cpu/self/tmpl/sub` backends have been removed. These backends were intially added to test the backend inheritance mechanism, but this mechanism is now widely used and tested in multiple backends. 87bcb2dfaeSJed Brown 88bcb2dfaeSJed Brown(v0-8)= 89bcb2dfaeSJed Brown 90bcb2dfaeSJed Brown## v0.8 (Mar 31, 2021) 91bcb2dfaeSJed Brown 92bcb2dfaeSJed Brown### Interface changes 93bcb2dfaeSJed Brown 94bcb2dfaeSJed Brown- Error handling improved to include enumerated error codes for C interface return values. 95bcb2dfaeSJed Brown- Installed headers that will follow semantic versioning were moved to {code}`include/ceed` directory. These headers have been renamed from {code}`ceed-*.h` to {code}`ceed/*.h`. Placeholder headers with the old naming schema are currently provided, but these headers will be removed in the libCEED v0.9 release. 96bcb2dfaeSJed Brown 97bcb2dfaeSJed Brown### New features 98bcb2dfaeSJed Brown 99bcb2dfaeSJed Brown- Julia and Rust interfaces added, providing a nearly 1-1 correspondence with the C interface, plus some convenience features. 100bcb2dfaeSJed Brown- Static libraries can be built with `make STATIC=1` and the pkg-config file is installed accordingly. 101bcb2dfaeSJed Brown- Add {c:func}`CeedOperatorLinearAssembleSymbolic` and {c:func}`CeedOperatorLinearAssemble` to support full assembly of libCEED operators. 102bcb2dfaeSJed Brown 103bcb2dfaeSJed Brown### Performance improvements 104bcb2dfaeSJed Brown 105bcb2dfaeSJed Brown- New HIP MAGMA backends for hipMAGMA library users: `/gpu/hip/magma` and `/gpu/hip/magma/det`. 106bcb2dfaeSJed Brown- New HIP backends for improved tensor basis performance: `/gpu/hip/shared` and `/gpu/hip/gen`. 107bcb2dfaeSJed Brown 108bcb2dfaeSJed Brown### Examples 109bcb2dfaeSJed Brown 110bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with traction boundary conditions and improved Dirichlet boundary conditions. 111bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with Neo-Hookean hyperelasticity in current configuration as well as improved Neo-Hookean hyperelasticity exploring storage vs computation tradeoffs. 112bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` example updated with isentropic traveling vortex test case, an analytical solution to the Euler equations that is useful for testing boundary conditions, discretization stability, and order of accuracy. 113bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` example updated with support for performing convergence study and plotting order of convergence by polynomial degree. 114bcb2dfaeSJed Brown 115bcb2dfaeSJed Brown(v0-7)= 116bcb2dfaeSJed Brown 117bcb2dfaeSJed Brown## v0.7 (Sep 29, 2020) 118bcb2dfaeSJed Brown 119bcb2dfaeSJed Brown### Interface changes 120bcb2dfaeSJed Brown 121bcb2dfaeSJed Brown- Replace limited {code}`CeedInterlaceMode` with more flexible component stride {code}`compstride` in {code}`CeedElemRestriction` constructors. 122bcb2dfaeSJed Brown As a result, the {code}`indices` parameter has been replaced with {code}`offsets` and the {code}`nnodes` parameter has been replaced with {code}`lsize`. 123bcb2dfaeSJed Brown These changes improve support for mixed finite element methods. 124bcb2dfaeSJed Brown- Replace various uses of {code}`Ceed*Get*Status` with {code}`Ceed*Is*` in the backend API to match common nomenclature. 125bcb2dfaeSJed Brown- Replace {code}`CeedOperatorAssembleLinearDiagonal` with {c:func}`CeedOperatorLinearAssembleDiagonal` for clarity. 126bcb2dfaeSJed Brown- Linear Operators can be assembled as point-block diagonal matrices with {c:func}`CeedOperatorLinearAssemblePointBlockDiagonal`, provided in row-major form in a {code}`ncomp` by {code}`ncomp` block per node. 127bcb2dfaeSJed Brown- Diagonal assemble interface changed to accept a {ref}`CeedVector` instead of a pointer to a {ref}`CeedVector` to reduce memory movement when interfacing with calling code. 128bcb2dfaeSJed Brown- Added {c:func}`CeedOperatorLinearAssembleAddDiagonal` and {c:func}`CeedOperatorLinearAssembleAddPointBlockDiagonal` for improved future integration with codes such as MFEM that compose the action of {ref}`CeedOperator`s external to libCEED. 129bcb2dfaeSJed Brown- Added {c:func}`CeedVectorTakeAray` to sync and remove libCEED read/write access to an allocated array and pass ownership of the array to the caller. 130bcb2dfaeSJed Brown This function is recommended over {c:func}`CeedVectorSyncArray` when the {code}`CeedVector` has an array owned by the caller that was set by {c:func}`CeedVectorSetArray`. 131bcb2dfaeSJed Brown- Added {code}`CeedQFunctionContext` object to manage user QFunction context data and reduce copies between device and host memory. 132bcb2dfaeSJed Brown- Added {c:func}`CeedOperatorMultigridLevelCreate`, {c:func}`CeedOperatorMultigridLevelCreateTensorH1`, and {c:func}`CeedOperatorMultigridLevelCreateH1` to facilitate creation of multigrid prolongation, restriction, and coarse grid operators using a common quadrature space. 133bcb2dfaeSJed Brown 134bcb2dfaeSJed Brown### New features 135bcb2dfaeSJed Brown 136bcb2dfaeSJed Brown- New HIP backend: `/gpu/hip/ref`. 137bcb2dfaeSJed Brown- CeedQFunction support for user `CUfunction`s in some backends 138bcb2dfaeSJed Brown 139bcb2dfaeSJed Brown### Performance improvements 140bcb2dfaeSJed Brown 141bcb2dfaeSJed Brown- OCCA backend rebuilt to facilitate future performance enhancements. 142bcb2dfaeSJed Brown- Petsc BPs suite improved to reduce noise due to multiple calls to {code}`mpiexec`. 143bcb2dfaeSJed Brown 144bcb2dfaeSJed Brown### Examples 145bcb2dfaeSJed Brown 146bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` example updated with strain energy computation and more flexible boundary conditions. 147bcb2dfaeSJed Brown 148bcb2dfaeSJed Brown### Deprecated backends 149bcb2dfaeSJed Brown 150bcb2dfaeSJed Brown- The `/gpu/cuda/reg` backend has been removed, with its core features moved into `/gpu/cuda/ref` and `/gpu/cuda/shared`. 151bcb2dfaeSJed Brown 152bcb2dfaeSJed Brown(v0-6)= 153bcb2dfaeSJed Brown 154bcb2dfaeSJed Brown## v0.6 (Mar 29, 2020) 155bcb2dfaeSJed Brown 156bcb2dfaeSJed BrownlibCEED v0.6 contains numerous new features and examples, as well as expanded 15713964f07SJed Browndocumentation in [this new website](https://libceed.org). 158bcb2dfaeSJed Brown 159bcb2dfaeSJed Brown### New features 160bcb2dfaeSJed Brown 161bcb2dfaeSJed Brown- New Python interface using [CFFI](https://cffi.readthedocs.io/) provides a nearly 162bcb2dfaeSJed Brown 1-1 correspondence with the C interface, plus some convenience features. For instance, 163bcb2dfaeSJed Brown data stored in the {cpp:type}`CeedVector` structure are available without copy as 164bcb2dfaeSJed Brown {py:class}`numpy.ndarray`. Short tutorials are provided in 165bcb2dfaeSJed Brown [Binder](https://mybinder.org/v2/gh/CEED/libCEED/main?urlpath=lab/tree/examples/tutorials/). 166bcb2dfaeSJed Brown- Linear QFunctions can be assembled as block-diagonal matrices (per quadrature point, 167bcb2dfaeSJed Brown {c:func}`CeedOperatorAssembleLinearQFunction`) or to evaluate the diagonal 168bcb2dfaeSJed Brown ({c:func}`CeedOperatorAssembleLinearDiagonal`). These operations are useful for 169bcb2dfaeSJed Brown preconditioning ingredients and are used in the libCEED's multigrid examples. 170bcb2dfaeSJed Brown- The inverse of separable operators can be obtained using 171bcb2dfaeSJed Brown {c:func}`CeedOperatorCreateFDMElementInverse` and applied with 172bcb2dfaeSJed Brown {c:func}`CeedOperatorApply`. This is a useful preconditioning ingredient, 173bcb2dfaeSJed Brown especially for Laplacians and related operators. 174bcb2dfaeSJed Brown- New functions: {c:func}`CeedVectorNorm`, {c:func}`CeedOperatorApplyAdd`, 175bcb2dfaeSJed Brown {c:func}`CeedQFunctionView`, {c:func}`CeedOperatorView`. 176bcb2dfaeSJed Brown- Make public accessors for various attributes to facilitate writing composable code. 177bcb2dfaeSJed Brown- New backend: `/cpu/self/memcheck/serial`. 178bcb2dfaeSJed Brown- QFunctions using variable-length array (VLA) pointer constructs can be used with CUDA 179bcb2dfaeSJed Brown backends. (Single source is coming soon for OCCA backends.) 180bcb2dfaeSJed Brown- Fix some missing edge cases in CUDA backend. 181bcb2dfaeSJed Brown 182bcb2dfaeSJed Brown### Performance Improvements 183bcb2dfaeSJed Brown 184bcb2dfaeSJed Brown- MAGMA backend performance optimization and non-tensor bases. 185bcb2dfaeSJed Brown- No-copy optimization in {c:func}`CeedOperatorApply`. 186bcb2dfaeSJed Brown 187bcb2dfaeSJed Brown### Interface changes 188bcb2dfaeSJed Brown 189bcb2dfaeSJed Brown- Replace {code}`CeedElemRestrictionCreateIdentity` and 190bcb2dfaeSJed Brown {code}`CeedElemRestrictionCreateBlocked` with more flexible 191bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionCreateStrided` and 192bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionCreateBlockedStrided`. 193bcb2dfaeSJed Brown- Add arguments to {c:func}`CeedQFunctionCreateIdentity`. 194bcb2dfaeSJed Brown- Replace ambiguous uses of {cpp:enum}`CeedTransposeMode` for L-vector identification 195bcb2dfaeSJed Brown with {cpp:enum}`CeedInterlaceMode`. This is now an attribute of the 196bcb2dfaeSJed Brown {cpp:type}`CeedElemRestriction` (see {c:func}`CeedElemRestrictionCreate`) and no 197bcb2dfaeSJed Brown longer passed as `lmode` arguments to {c:func}`CeedOperatorSetField` and 198bcb2dfaeSJed Brown {c:func}`CeedElemRestrictionApply`. 199bcb2dfaeSJed Brown 200bcb2dfaeSJed Brown### Examples 201bcb2dfaeSJed Brown 202bcb2dfaeSJed BrownlibCEED-0.6 contains greatly expanded examples with {ref}`new documentation <Examples>`. 203bcb2dfaeSJed BrownNotable additions include: 204bcb2dfaeSJed Brown 205bcb2dfaeSJed Brown- Standalone {ref}`ex2-surface` ({file}`examples/ceed/ex2-surface`): compute the area of 206bcb2dfaeSJed Brown a domain in 1, 2, and 3 dimensions by applying a Laplacian. 207bcb2dfaeSJed Brown 208bcb2dfaeSJed Brown- PETSc {ref}`example-petsc-area` ({file}`examples/petsc/area.c`): computes surface area 209bcb2dfaeSJed Brown of domains (like the cube and sphere) by direct integration on a surface mesh; 210bcb2dfaeSJed Brown demonstrates geometric dimension different from topological dimension. 211bcb2dfaeSJed Brown 212bcb2dfaeSJed Brown- PETSc {ref}`example-petsc-bps`: 213bcb2dfaeSJed Brown 214bcb2dfaeSJed Brown - {file}`examples/petsc/bpsraw.c` (formerly `bps.c`): transparent CUDA support. 215bcb2dfaeSJed Brown - {file}`examples/petsc/bps.c` (formerly `bpsdmplex.c`): performance improvements 216bcb2dfaeSJed Brown and transparent CUDA support. 217bcb2dfaeSJed Brown - {ref}`example-petsc-bps-sphere` ({file}`examples/petsc/bpssphere.c`): 218bcb2dfaeSJed Brown generalizations of all CEED BPs to the surface of the sphere; demonstrates geometric 219bcb2dfaeSJed Brown dimension different from topological dimension. 220bcb2dfaeSJed Brown 221bcb2dfaeSJed Brown- {ref}`example-petsc-multigrid` ({file}`examples/petsc/multigrid.c`): new p-multigrid 222bcb2dfaeSJed Brown solver with algebraic multigrid coarse solve. 223bcb2dfaeSJed Brown 224bcb2dfaeSJed Brown- {ref}`example-petsc-navier-stokes` ({file}`examples/fluids/navierstokes.c`; formerly 225bcb2dfaeSJed Brown `examples/navier-stokes`): unstructured grid support (using PETSc's `DMPlex`), 226bcb2dfaeSJed Brown implicit time integration, SU/SUPG stabilization, free-slip boundary conditions, and 227bcb2dfaeSJed Brown quasi-2D computational domain support. 228bcb2dfaeSJed Brown 229bcb2dfaeSJed Brown- {ref}`example-petsc-elasticity` ({file}`examples/solids/elasticity.c`): new solver for 230bcb2dfaeSJed Brown linear elasticity, small-strain hyperelasticity, and globalized finite-strain 231bcb2dfaeSJed Brown hyperelasticity using p-multigrid with algebraic multigrid coarse solve. 232bcb2dfaeSJed Brown 233bcb2dfaeSJed Brown(v0-5)= 234bcb2dfaeSJed Brown 235bcb2dfaeSJed Brown## v0.5 (Sep 18, 2019) 236bcb2dfaeSJed Brown 237bcb2dfaeSJed BrownFor this release, several improvements were made. Two new CUDA backends were added to 238bcb2dfaeSJed Brownthe family of backends, of which, the new `cuda-gen` backend achieves state-of-the-art 239bcb2dfaeSJed Brownperformance using single-source {ref}`CeedQFunction`. From this release, users 240bcb2dfaeSJed Browncan define Q-Functions in a single source code independently of the targeted backend 241bcb2dfaeSJed Brownwith the aid of a new macro `CEED QFUNCTION` to support JIT (Just-In-Time) and CPU 242bcb2dfaeSJed Browncompilation of the user provided {ref}`CeedQFunction` code. To allow a unified 243bcb2dfaeSJed Browndeclaration, the {ref}`CeedQFunction` API has undergone a slight change: 244bcb2dfaeSJed Brownthe `QFunctionField` parameter `ncomp` has been changed to `size`. This change 245bcb2dfaeSJed Brownrequires setting the previous value of `ncomp` to `ncomp*dim` when adding a 246bcb2dfaeSJed Brown`QFunctionField` with eval mode `CEED EVAL GRAD`. 247bcb2dfaeSJed Brown 248bcb2dfaeSJed BrownAdditionally, new CPU backends 249bcb2dfaeSJed Brownwere included in this release, such as the `/cpu/self/opt/*` backends (which are 250bcb2dfaeSJed Brownwritten in pure C and use partial **E-vectors** to improve performance) and the 251bcb2dfaeSJed Brown`/cpu/self/ref/memcheck` backend (which relies upon the 252bcb2dfaeSJed Brown[Valgrind](http://valgrind.org/) Memcheck tool to help verify that user 253bcb2dfaeSJed Brown{ref}`CeedQFunction` have no undefined values). 254bcb2dfaeSJed BrownThis release also included various performance improvements, bug fixes, new examples, 255bcb2dfaeSJed Brownand improved tests. Among these improvements, vectorized instructions for 256bcb2dfaeSJed Brown{ref}`CeedQFunction` code compiled for CPU were enhanced by using `CeedPragmaSIMD` 257bcb2dfaeSJed Browninstead of `CeedPragmaOMP`, implementation of a {ref}`CeedQFunction` gallery and 258bcb2dfaeSJed Brownidentity Q-Functions were introduced, and the PETSc benchmark problems were expanded 259bcb2dfaeSJed Brownto include unstructured meshes handling were. For this expansion, the prior version of 260bcb2dfaeSJed Brownthe PETSc BPs, which only included data associated with structured geometries, were 261bcb2dfaeSJed Brownrenamed `bpsraw`, and the new version of the BPs, which can handle data associated 262bcb2dfaeSJed Brownwith any unstructured geometry, were called `bps`. Additionally, other benchmark 263bcb2dfaeSJed Brownproblems, namely BP2 and BP4 (the vector-valued versions of BP1 and BP3, respectively), 264bcb2dfaeSJed Brownand BP5 and BP6 (the collocated versions---for which the quadrature points are the same 265bcb2dfaeSJed Brownas the Gauss Lobatto nodes---of BP3 and BP4 respectively) were added to the PETSc 266bcb2dfaeSJed Brownexamples. Furthermoew, another standalone libCEED example, called `ex2`, which 267bcb2dfaeSJed Browncomputes the surface area of a given mesh was added to this release. 268bcb2dfaeSJed Brown 269bcb2dfaeSJed BrownBackends available in this release: 270bcb2dfaeSJed Brown 27168e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 27268e843eeSJed Brown|--------------------------|-----------------------------------------------------| 27368e843eeSJed Brown| `/cpu/self/ref/serial` | Serial reference implementation | 27468e843eeSJed Brown| `/cpu/self/ref/blocked` | Blocked reference implementation | 27568e843eeSJed Brown| `/cpu/self/ref/memcheck` | Memcheck backend, undefined value checks | 27668e843eeSJed Brown| `/cpu/self/opt/serial` | Serial optimized C implementation | 27768e843eeSJed Brown| `/cpu/self/opt/blocked` | Blocked optimized C implementation | 27868e843eeSJed Brown| `/cpu/self/avx/serial` | Serial AVX implementation | 27968e843eeSJed Brown| `/cpu/self/avx/blocked` | Blocked AVX implementation | 28068e843eeSJed Brown| `/cpu/self/xsmm/serial` | Serial LIBXSMM implementation | 28168e843eeSJed Brown| `/cpu/self/xsmm/blocked` | Blocked LIBXSMM implementation | 28268e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 28368e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 28468e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 28568e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 28668e843eeSJed Brown| `/gpu/cuda/ref` | Reference pure CUDA kernels | 28768e843eeSJed Brown| `/gpu/cuda/reg` | Pure CUDA kernels using one thread per element | 28868e843eeSJed Brown| `/gpu/cuda/shared` | Optimized pure CUDA kernels using shared memory | 28968e843eeSJed Brown| `/gpu/cuda/gen` | Optimized pure CUDA kernels using code generation | 29068e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 291bcb2dfaeSJed Brown 292bcb2dfaeSJed BrownExamples available in this release: 293bcb2dfaeSJed Brown 29468e843eeSJed Brown:::{list-table} 29568e843eeSJed Brown:header-rows: 1 29668e843eeSJed Brown:widths: auto 29768e843eeSJed Brown* - User code 29868e843eeSJed Brown - Example 29968e843eeSJed Brown* - `ceed` 30068e843eeSJed Brown - * ex1 (volume) 30168e843eeSJed Brown * ex2 (surface) 30268e843eeSJed Brown* - `mfem` 30368e843eeSJed Brown - * BP1 (scalar mass operator) 30468e843eeSJed Brown * BP3 (scalar Laplace operator) 30568e843eeSJed Brown* - `petsc` 30668e843eeSJed Brown - * BP1 (scalar mass operator) 30768e843eeSJed Brown * BP2 (vector mass operator) 30868e843eeSJed Brown * BP3 (scalar Laplace operator) 30968e843eeSJed Brown * BP4 (vector Laplace operator) 31068e843eeSJed Brown * BP5 (collocated scalar Laplace operator) 31168e843eeSJed Brown * BP6 (collocated vector Laplace operator) 31268e843eeSJed Brown * Navier-Stokes 31368e843eeSJed Brown* - `nek5000` 31468e843eeSJed Brown - * BP1 (scalar mass operator) 31568e843eeSJed Brown * BP3 (scalar Laplace operator) 31668e843eeSJed Brown::: 317bcb2dfaeSJed Brown 318bcb2dfaeSJed Brown(v0-4)= 319bcb2dfaeSJed Brown 320bcb2dfaeSJed Brown## v0.4 (Apr 1, 2019) 321bcb2dfaeSJed Brown 322bcb2dfaeSJed BrownlibCEED v0.4 was made again publicly available in the second full CEED software 323bcb2dfaeSJed Browndistribution, release CEED 2.0. This release contained notable features, such as 324bcb2dfaeSJed Brownfour new CPU backends, two new GPU backends, CPU backend optimizations, initial 325bcb2dfaeSJed Brownsupport for operator composition, performance benchmarking, and a Navier-Stokes demo. 326bcb2dfaeSJed BrownThe new CPU backends in this release came in two families. The `/cpu/self/*/serial` 327bcb2dfaeSJed Brownbackends process one element at a time and are intended for meshes with a smaller number 328bcb2dfaeSJed Brownof high order elements. The `/cpu/self/*/blocked` backends process blocked batches of 329bcb2dfaeSJed Browneight interlaced elements and are intended for meshes with higher numbers of elements. 330bcb2dfaeSJed BrownThe `/cpu/self/avx/*` backends rely upon AVX instructions to provide vectorized CPU 331bcb2dfaeSJed Brownperformance. The `/cpu/self/xsmm/*` backends rely upon the 332bcb2dfaeSJed Brown[LIBXSMM](http://github.com/hfp/libxsmm) package to provide vectorized CPU 333bcb2dfaeSJed Brownperformance. The `/gpu/cuda/*` backends provide GPU performance strictly using CUDA. 334bcb2dfaeSJed BrownThe `/gpu/cuda/ref` backend is a reference CUDA backend, providing reasonable 335bcb2dfaeSJed Brownperformance for most problem configurations. The `/gpu/cuda/reg` backend uses a simple 336bcb2dfaeSJed Brownparallelization approach, where each thread treats a finite element. Using just in time 337bcb2dfaeSJed Browncompilation, provided by nvrtc (NVidia Runtime Compiler), and runtime parameters, this 338bcb2dfaeSJed Brownbackend unroll loops and map memory address to registers. The `/gpu/cuda/reg` backend 339bcb2dfaeSJed Brownachieve good peak performance for 1D, 2D, and low order 3D problems, but performance 340bcb2dfaeSJed Browndeteriorates very quickly when threads run out of registers. 341bcb2dfaeSJed Brown 342bcb2dfaeSJed BrownA new explicit time-stepping Navier-Stokes solver was added to the family of libCEED 343bcb2dfaeSJed Brownexamples in the `examples/petsc` directory (see {ref}`example-petsc-navier-stokes`). 344bcb2dfaeSJed BrownThis example solves the time-dependent Navier-Stokes equations of compressible gas 345bcb2dfaeSJed Browndynamics in a static Eulerian three-dimensional frame, using structured high-order 346bcb2dfaeSJed Brownfinite/spectral element spatial discretizations and explicit high-order time-stepping 347bcb2dfaeSJed Brown(available in PETSc). Moreover, the Navier-Stokes example was developed using PETSc, 348bcb2dfaeSJed Brownso that the pointwise physics (defined at quadrature points) is separated from the 349bcb2dfaeSJed Brownparallelization and meshing concerns. 350bcb2dfaeSJed Brown 351bcb2dfaeSJed BrownBackends available in this release: 352bcb2dfaeSJed Brown 35368e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 35468e843eeSJed Brown|--------------------------|-----------------------------------------------------| 35568e843eeSJed Brown| `/cpu/self/ref/serial` | Serial reference implementation | 35668e843eeSJed Brown| `/cpu/self/ref/blocked` | Blocked reference implementation | 35768e843eeSJed Brown| `/cpu/self/tmpl` | Backend template, defaults to `/cpu/self/blocked` | 35868e843eeSJed Brown| `/cpu/self/avx/serial` | Serial AVX implementation | 35968e843eeSJed Brown| `/cpu/self/avx/blocked` | Blocked AVX implementation | 36068e843eeSJed Brown| `/cpu/self/xsmm/serial` | Serial LIBXSMM implementation | 36168e843eeSJed Brown| `/cpu/self/xsmm/blocked` | Blocked LIBXSMM implementation | 36268e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 36368e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 36468e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 36568e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 36668e843eeSJed Brown| `/gpu/cuda/ref` | Reference pure CUDA kernels | 36768e843eeSJed Brown| `/gpu/cuda/reg` | Pure CUDA kernels using one thread per element | 36868e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 369bcb2dfaeSJed Brown 370bcb2dfaeSJed BrownExamples available in this release: 371bcb2dfaeSJed Brown 37268e843eeSJed Brown:::{list-table} 37368e843eeSJed Brown:header-rows: 1 37468e843eeSJed Brown:widths: auto 37568e843eeSJed Brown* - User code 37668e843eeSJed Brown - Example 37768e843eeSJed Brown* - `ceed` 37868e843eeSJed Brown - * ex1 (volume) 37968e843eeSJed Brown* - `mfem` 38068e843eeSJed Brown - * BP1 (scalar mass operator) 38168e843eeSJed Brown * BP3 (scalar Laplace operator) 38268e843eeSJed Brown* - `petsc` 38368e843eeSJed Brown - * BP1 (scalar mass operator) 38468e843eeSJed Brown * BP3 (scalar Laplace operator) 38568e843eeSJed Brown * Navier-Stokes 38668e843eeSJed Brown* - `nek5000` 38768e843eeSJed Brown - * BP1 (scalar mass operator) 38868e843eeSJed Brown * BP3 (scalar Laplace operator) 38968e843eeSJed Brown::: 390bcb2dfaeSJed Brown 391bcb2dfaeSJed Brown(v0-3)= 392bcb2dfaeSJed Brown 393bcb2dfaeSJed Brown## v0.3 (Sep 30, 2018) 394bcb2dfaeSJed Brown 395bcb2dfaeSJed BrownNotable features in this release include active/passive field interface, support for 396bcb2dfaeSJed Brownnon-tensor bases, backend optimization, and improved Fortran interface. This release 397bcb2dfaeSJed Brownalso focused on providing improved continuous integration, and many new tests with code 398bcb2dfaeSJed Browncoverage reports of about 90%. This release also provided a significant change to the 399bcb2dfaeSJed Brownpublic interface: a {ref}`CeedQFunction` can take any number of named input and output 400bcb2dfaeSJed Brownarguments while {ref}`CeedOperator` connects them to the actual data, which may be 401bcb2dfaeSJed Brownsupplied explicitly to `CeedOperatorApply()` (active) or separately via 402bcb2dfaeSJed Brown`CeedOperatorSetField()` (passive). This interface change enables reusable libraries 403bcb2dfaeSJed Brownof CeedQFunctions and composition of block solvers constructed using 404bcb2dfaeSJed Brown{ref}`CeedOperator`. A concept of blocked restriction was added to this release and 405bcb2dfaeSJed Brownused in an optimized CPU backend. Although this is typically not visible to the user, 406bcb2dfaeSJed Brownit enables effective use of arbitrary-length SIMD while maintaining cache locality. 407bcb2dfaeSJed BrownThis CPU backend also implements an algebraic factorization of tensor product gradients 408bcb2dfaeSJed Brownto perform fewer operations than standard application of interpolation and 409bcb2dfaeSJed Browndifferentiation from nodes to quadrature points. This algebraic formulation 410bcb2dfaeSJed Brownautomatically supports non-polynomial and non-interpolatory bases, thus is more general 411bcb2dfaeSJed Brownthan the more common derivation in terms of Lagrange polynomials on the quadrature points. 412bcb2dfaeSJed Brown 413bcb2dfaeSJed BrownBackends available in this release: 414bcb2dfaeSJed Brown 41568e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 41668e843eeSJed Brown|-------------------------|-----------------------------------------------------| 41768e843eeSJed Brown| `/cpu/self/blocked` | Blocked reference implementation | 41868e843eeSJed Brown| `/cpu/self/ref` | Serial reference implementation | 41968e843eeSJed Brown| `/cpu/self/tmpl` | Backend template, defaults to `/cpu/self/blocked` | 42068e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 42168e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 42268e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 42368e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 42468e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 425bcb2dfaeSJed Brown 426bcb2dfaeSJed BrownExamples available in this release: 427bcb2dfaeSJed Brown 42868e843eeSJed Brown:::{list-table} 42968e843eeSJed Brown:header-rows: 1 43068e843eeSJed Brown:widths: auto 43168e843eeSJed Brown* - User code 43268e843eeSJed Brown - Example 43368e843eeSJed Brown* - `ceed` 43468e843eeSJed Brown - * ex1 (volume) 43568e843eeSJed Brown* - `mfem` 43668e843eeSJed Brown - * BP1 (scalar mass operator) 43768e843eeSJed Brown * BP3 (scalar Laplace operator) 43868e843eeSJed Brown* - `petsc` 43968e843eeSJed Brown - * BP1 (scalar mass operator) 44068e843eeSJed Brown * BP3 (scalar Laplace operator) 44168e843eeSJed Brown* - `nek5000` 44268e843eeSJed Brown - * BP1 (scalar mass operator) 44368e843eeSJed Brown * BP3 (scalar Laplace operator) 44468e843eeSJed Brown::: 445bcb2dfaeSJed Brown 446bcb2dfaeSJed Brown(v0-21)= 447bcb2dfaeSJed Brown 448bcb2dfaeSJed Brown## v0.21 (Sep 30, 2018) 449bcb2dfaeSJed Brown 450bcb2dfaeSJed BrownA MAGMA backend (which relies upon the 451bcb2dfaeSJed Brown[MAGMA](https://bitbucket.org/icl/magma) package) was integrated in libCEED for this 452bcb2dfaeSJed Brownrelease. This initial integration set up the framework of using MAGMA and provided the 453bcb2dfaeSJed BrownlibCEED functionality through MAGMA kernels as one of libCEED’s computational backends. 454bcb2dfaeSJed BrownAs any other backend, the MAGMA backend provides extended basic data structures for 455bcb2dfaeSJed Brown{ref}`CeedVector`, {ref}`CeedElemRestriction`, and {ref}`CeedOperator`, and implements 456bcb2dfaeSJed Brownthe fundamental CEED building blocks to work with the new data structures. 457bcb2dfaeSJed BrownIn general, the MAGMA-specific data structures keep the libCEED pointers to CPU data 458bcb2dfaeSJed Brownbut also add corresponding device (e.g., GPU) pointers to the data. Coherency is handled 459bcb2dfaeSJed Browninternally, and thus seamlessly to the user, through the functions/methods that are 460bcb2dfaeSJed Brownprovided to support them. 461bcb2dfaeSJed Brown 462bcb2dfaeSJed BrownBackends available in this release: 463bcb2dfaeSJed Brown 46468e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 46568e843eeSJed Brown|-------------------------|---------------------------------| 46668e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 46768e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 46868e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 46968e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 47068e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 47168e843eeSJed Brown| `/gpu/magma` | CUDA MAGMA kernels | 472bcb2dfaeSJed Brown 473bcb2dfaeSJed BrownExamples available in this release: 474bcb2dfaeSJed Brown 47568e843eeSJed Brown:::{list-table} 47668e843eeSJed Brown:header-rows: 1 47768e843eeSJed Brown:widths: auto 47868e843eeSJed Brown* - User code 47968e843eeSJed Brown - Example 48068e843eeSJed Brown* - `ceed` 48168e843eeSJed Brown - * ex1 (volume) 48268e843eeSJed Brown* - `mfem` 48368e843eeSJed Brown - * BP1 (scalar mass operator) 48468e843eeSJed Brown * BP3 (scalar Laplace operator) 48568e843eeSJed Brown* - `petsc` 48668e843eeSJed Brown - * BP1 (scalar mass operator) 48768e843eeSJed Brown* - `nek5000` 48868e843eeSJed Brown - * BP1 (scalar mass operator) 48968e843eeSJed Brown::: 490bcb2dfaeSJed Brown 491bcb2dfaeSJed Brown(v0-2)= 492bcb2dfaeSJed Brown 493bcb2dfaeSJed Brown## v0.2 (Mar 30, 2018) 494bcb2dfaeSJed Brown 495bcb2dfaeSJed BrownlibCEED was made publicly available the first full CEED software distribution, release 496bcb2dfaeSJed BrownCEED 1.0. The distribution was made available using the Spack package manager to provide 497bcb2dfaeSJed Browna common, easy-to-use build environment, where the user can build the CEED distribution 498bcb2dfaeSJed Brownwith all dependencies. This release included a new Fortran interface for the library. 499bcb2dfaeSJed BrownThis release also contained major improvements in the OCCA backend (including a new 500bcb2dfaeSJed Brown`/ocl/occa` backend) and new examples. The standalone libCEED example was modified to 501bcb2dfaeSJed Browncompute the volume volume of a given mesh (in 1D, 2D, or 3D) and placed in an 502bcb2dfaeSJed Brown`examples/ceed` subfolder. A new `mfem` example to perform BP3 (with the application 503bcb2dfaeSJed Brownof the Laplace operator) was also added to this release. 504bcb2dfaeSJed Brown 505bcb2dfaeSJed BrownBackends available in this release: 506bcb2dfaeSJed Brown 50768e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 50868e843eeSJed Brown|-------------------------|---------------------------------| 50968e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 51068e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 51168e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 51268e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 51368e843eeSJed Brown| `/ocl/occa` | OpenCL OCCA kernels | 514bcb2dfaeSJed Brown 515bcb2dfaeSJed BrownExamples available in this release: 516bcb2dfaeSJed Brown 51768e843eeSJed Brown:::{list-table} 51868e843eeSJed Brown:header-rows: 1 51968e843eeSJed Brown:widths: auto 52068e843eeSJed Brown* - User code 52168e843eeSJed Brown - Example 52268e843eeSJed Brown* - `ceed` 52368e843eeSJed Brown - * ex1 (volume) 52468e843eeSJed Brown* - `mfem` 52568e843eeSJed Brown - * BP1 (scalar mass operator) 52668e843eeSJed Brown * BP3 (scalar Laplace operator) 52768e843eeSJed Brown* - `petsc` 52868e843eeSJed Brown - * BP1 (scalar mass operator) 52968e843eeSJed Brown* - `nek5000` 53068e843eeSJed Brown - * BP1 (scalar mass operator) 53168e843eeSJed Brown::: 532bcb2dfaeSJed Brown 533bcb2dfaeSJed Brown(v0-1)= 534bcb2dfaeSJed Brown 535bcb2dfaeSJed Brown## v0.1 (Jan 3, 2018) 536bcb2dfaeSJed Brown 537bcb2dfaeSJed BrownInitial low-level API of the CEED project. The low-level API provides a set of Finite 538bcb2dfaeSJed BrownElements kernels and components for writing new low-level kernels. Examples include: 539bcb2dfaeSJed Brownvector and sparse linear algebra, element matrix assembly over a batch of elements, 540bcb2dfaeSJed Brownpartial assembly and action for efficient high-order operators like mass, diffusion, 541bcb2dfaeSJed Brownadvection, etc. The main goal of the low-level API is to establish the basis for the 542bcb2dfaeSJed Brownhigh-level API. Also, identifying such low-level kernels and providing a reference 543bcb2dfaeSJed Brownimplementation for them serves as the basis for specialized backend implementations. 544bcb2dfaeSJed BrownThis release contained several backends: `/cpu/self`, and backends which rely upon the 545bcb2dfaeSJed Brown[OCCA](http://github.com/libocca/occa) package, such as `/cpu/occa`, 546bcb2dfaeSJed Brown`/gpu/occa`, and `/omp/occa`. 547bcb2dfaeSJed BrownIt also included several examples, in the `examples` folder: 548bcb2dfaeSJed BrownA standalone code that shows the usage of libCEED (with no external 549bcb2dfaeSJed Browndependencies) to apply the Laplace operator, `ex1`; an `mfem` example to perform BP1 550bcb2dfaeSJed Brown(with the application of the mass operator); and a `petsc` example to perform BP1 551bcb2dfaeSJed Brown(with the application of the mass operator). 552bcb2dfaeSJed Brown 553bcb2dfaeSJed BrownBackends available in this release: 554bcb2dfaeSJed Brown 55568e843eeSJed Brown| CEED resource (`-ceed`) | Backend | 55668e843eeSJed Brown|-------------------------|---------------------------------| 55768e843eeSJed Brown| `/cpu/self` | Serial reference implementation | 55868e843eeSJed Brown| `/cpu/occa` | Serial OCCA kernels | 55968e843eeSJed Brown| `/gpu/occa` | CUDA OCCA kernels | 56068e843eeSJed Brown| `/omp/occa` | OpenMP OCCA kernels | 561bcb2dfaeSJed Brown 562bcb2dfaeSJed BrownExamples available in this release: 563bcb2dfaeSJed Brown 564bcb2dfaeSJed Brown| User code | Example | 56568e843eeSJed Brown|-----------------------|-----------------------------------| 56668e843eeSJed Brown| `ceed` | ex1 (scalar Laplace operator) | 56768e843eeSJed Brown| `mfem` | BP1 (scalar mass operator) | 56868e843eeSJed Brown| `petsc` | BP1 (scalar mass operator) | 569bcb2dfaeSJed Brown``` 570