xref: /libCEED/examples/fluids/qfunctions/newtonian.h (revision 7b69c78315ab4310d7f8ea4446c79ebcc05176cd)
13d8e8822SJeremy L Thompson // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors.
23d8e8822SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
388b783a1SJames Wright //
43d8e8822SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause
588b783a1SJames Wright //
63d8e8822SJeremy L Thompson // This file is part of CEED:  http://github.com/ceed
788b783a1SJames Wright 
888b783a1SJames Wright /// @file
988b783a1SJames Wright /// Operator for Navier-Stokes example using PETSc
1088b783a1SJames Wright 
1188b783a1SJames Wright #ifndef newtonian_h
1288b783a1SJames Wright #define newtonian_h
1388b783a1SJames Wright 
1488b783a1SJames Wright #include <ceed.h>
15c9c2c079SJeremy L Thompson #include <math.h>
16738af36cSAdelekeBankole #include <stdlib.h>
172b730f8bSJeremy L Thompson 
18c6e8c570SJames Wright #include "newtonian_state.h"
19c9c2c079SJeremy L Thompson #include "newtonian_types.h"
202b89d87eSLeila Ghaffari #include "stabilization.h"
21c9c2c079SJeremy L Thompson #include "utils.h"
2288626eedSJames Wright 
23530ad8c4SKenneth E. Jansen CEED_QFUNCTION_HELPER void InternalDampingLayer(const NewtonianIdealGasContext context, const State s, const CeedScalar x_i[3], CeedScalar damp_Y[5],
24530ad8c4SKenneth E. Jansen                                                 CeedScalar damp_residual[5]) {
25530ad8c4SKenneth E. Jansen   const CeedScalar sigma = LinearRampCoefficient(context->idl_amplitude, context->idl_length, context->idl_start, x_i[0]);
26530ad8c4SKenneth E. Jansen   ScaleN(damp_Y, sigma, 5);
27530ad8c4SKenneth E. Jansen   CeedScalar dx_i[3] = {0};
28530ad8c4SKenneth E. Jansen   State      damp_s  = StateFromY_fwd(context, s, damp_Y, x_i, dx_i);
29530ad8c4SKenneth E. Jansen 
30530ad8c4SKenneth E. Jansen   CeedScalar U[5];
31530ad8c4SKenneth E. Jansen   UnpackState_U(damp_s.U, U);
32530ad8c4SKenneth E. Jansen   for (int i = 0; i < 5; i++) damp_residual[i] += U[i];
33530ad8c4SKenneth E. Jansen }
34530ad8c4SKenneth E. Jansen 
3588626eedSJames Wright // *****************************************************************************
3688b783a1SJames Wright // This QFunction sets a "still" initial condition for generic Newtonian IG problems
3788b783a1SJames Wright // *****************************************************************************
38be91e165SJames Wright CEED_QFUNCTION_HELPER int ICsNewtonianIG(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) {
3988b783a1SJames Wright   // Inputs
4088b783a1SJames Wright   const CeedScalar(*X)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0];
4188b783a1SJames Wright 
4288b783a1SJames Wright   // Outputs
4388b783a1SJames Wright   CeedScalar(*q0)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0];
4488b783a1SJames Wright 
4588626eedSJames Wright   // Context
4688626eedSJames Wright   const SetupContext context = (SetupContext)ctx;
4788626eedSJames Wright 
4888b783a1SJames Wright   // Quadrature Point Loop
492b730f8bSJeremy L Thompson   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
50d310b3d3SAdeleke O. Bankole     CeedScalar x[3] = {X[0][i], X[1][i], X[2][i]};
5188b783a1SJames Wright     CeedScalar q[5] = {0.};
52d310b3d3SAdeleke O. Bankole     State      s    = StateFromPrimitive(&context->gas, context->reference, x);
53be91e165SJames Wright     StateToQ(&context->gas, s, q, state_var);
542b730f8bSJeremy L Thompson     for (CeedInt j = 0; j < 5; j++) q0[j][i] = q[j];
5588b783a1SJames Wright   }  // End of Quadrature Point Loop
5688b783a1SJames Wright   return 0;
5788b783a1SJames Wright }
5888b783a1SJames Wright 
592b730f8bSJeremy L Thompson CEED_QFUNCTION(ICsNewtonianIG_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
60be91e165SJames Wright   return ICsNewtonianIG(ctx, Q, in, out, STATEVAR_PRIMITIVE);
61d310b3d3SAdeleke O. Bankole }
62d310b3d3SAdeleke O. Bankole CEED_QFUNCTION(ICsNewtonianIG_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
63be91e165SJames Wright   return ICsNewtonianIG(ctx, Q, in, out, STATEVAR_CONSERVATIVE);
64dc805cc4SLeila Ghaffari }
65dc805cc4SLeila Ghaffari 
66dc805cc4SLeila Ghaffari // *****************************************************************************
67ea61e9acSJeremy L Thompson // This QFunction implements the following formulation of Navier-Stokes with explicit time stepping method
6888b783a1SJames Wright //
69ea61e9acSJeremy L Thompson // This is 3D compressible Navier-Stokes in conservation form with state variables of density, momentum density, and total energy density.
7088b783a1SJames Wright //
7188b783a1SJames Wright // State Variables: q = ( rho, U1, U2, U3, E )
7288b783a1SJames Wright //   rho - Mass Density
7388b783a1SJames Wright //   Ui  - Momentum Density,      Ui = rho ui
7488b783a1SJames Wright //   E   - Total Energy Density,  E  = rho (cv T + (u u)/2 + g z)
7588b783a1SJames Wright //
7688b783a1SJames Wright // Navier-Stokes Equations:
7788b783a1SJames Wright //   drho/dt + div( U )                               = 0
7888b783a1SJames Wright //   dU/dt   + div( rho (u x u) + P I3 ) + rho g khat = div( Fu )
7988b783a1SJames Wright //   dE/dt   + div( (E + P) u )                       = div( Fe )
8088b783a1SJames Wright //
8188b783a1SJames Wright // Viscous Stress:
8288b783a1SJames Wright //   Fu = mu (grad( u ) + grad( u )^T + lambda div ( u ) I3)
8388b783a1SJames Wright //
8488b783a1SJames Wright // Thermal Stress:
8588b783a1SJames Wright //   Fe = u Fu + k grad( T )
8688626eedSJames Wright // Equation of State
8788b783a1SJames Wright //   P = (gamma - 1) (E - rho (u u) / 2 - rho g z)
8888b783a1SJames Wright //
8988b783a1SJames Wright // Stabilization:
9088b783a1SJames Wright //   Tau = diag(TauC, TauM, TauM, TauM, TauE)
9188b783a1SJames Wright //     f1 = rho  sqrt(ui uj gij)
9288b783a1SJames Wright //     gij = dXi/dX * dXi/dX
9388b783a1SJames Wright //     TauC = Cc f1 / (8 gii)
9488b783a1SJames Wright //     TauM = min( 1 , 1 / f1 )
9588b783a1SJames Wright //     TauE = TauM / (Ce cv)
9688b783a1SJames Wright //
9788b783a1SJames Wright //  SU   = Galerkin + grad(v) . ( Ai^T * Tau * (Aj q,j) )
9888b783a1SJames Wright //
9988b783a1SJames Wright // Constants:
10088b783a1SJames Wright //   lambda = - 2 / 3,  From Stokes hypothesis
10188b783a1SJames Wright //   mu              ,  Dynamic viscosity
10288b783a1SJames Wright //   k               ,  Thermal conductivity
10388b783a1SJames Wright //   cv              ,  Specific heat, constant volume
10488b783a1SJames Wright //   cp              ,  Specific heat, constant pressure
10588b783a1SJames Wright //   g               ,  Gravity
10688b783a1SJames Wright //   gamma  = cp / cv,  Specific heat ratio
10788b783a1SJames Wright //
108ea61e9acSJeremy L Thompson // We require the product of the inverse of the Jacobian (dXdx_j,k) and its transpose (dXdx_k,j) to properly compute integrals of the form: int( gradv
109ea61e9acSJeremy L Thompson // gradu )
11088b783a1SJames Wright // *****************************************************************************
1112b730f8bSJeremy L Thompson CEED_QFUNCTION(RHSFunction_Newtonian)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
11288b783a1SJames Wright   // Inputs
11346603fc5SJames Wright   const CeedScalar(*q)[CEED_Q_VLA]         = (const CeedScalar(*)[CEED_Q_VLA])in[0];
11446603fc5SJames Wright   const CeedScalar(*Grad_q)[5][CEED_Q_VLA] = (const CeedScalar(*)[5][CEED_Q_VLA])in[1];
11546603fc5SJames Wright   const CeedScalar(*q_data)[CEED_Q_VLA]    = (const CeedScalar(*)[CEED_Q_VLA])in[2];
11646603fc5SJames Wright   const CeedScalar(*x)[CEED_Q_VLA]         = (const CeedScalar(*)[CEED_Q_VLA])in[3];
11746603fc5SJames Wright 
11888b783a1SJames Wright   // Outputs
11946603fc5SJames Wright   CeedScalar(*v)[CEED_Q_VLA]         = (CeedScalar(*)[CEED_Q_VLA])out[0];
12046603fc5SJames Wright   CeedScalar(*Grad_v)[5][CEED_Q_VLA] = (CeedScalar(*)[5][CEED_Q_VLA])out[1];
12188b783a1SJames Wright 
12288b783a1SJames Wright   // Context
12388b783a1SJames Wright   NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx;
12488626eedSJames Wright   const CeedScalar        *g       = context->g;
12588626eedSJames Wright   const CeedScalar         dt      = context->dt;
12688b783a1SJames Wright 
12788b783a1SJames Wright   // Quadrature Point Loop
12846603fc5SJames Wright   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
1295c677226SJed Brown     CeedScalar U[5];
1305c677226SJed Brown     for (int j = 0; j < 5; j++) U[j] = q[j][i];
1315c677226SJed Brown     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
1325c677226SJed Brown     State            s      = StateFromU(context, U, x_i);
1335c677226SJed Brown 
13488b783a1SJames Wright     // -- Interp-to-Interp q_data
13588b783a1SJames Wright     const CeedScalar wdetJ = q_data[0][i];
13688b783a1SJames Wright     // -- Interp-to-Grad q_data
13788b783a1SJames Wright     // ---- Inverse of change of coordinate matrix: X_i,j
1382b730f8bSJeremy L Thompson     const CeedScalar dXdx[3][3] = {
1392b730f8bSJeremy L Thompson         {q_data[1][i], q_data[2][i], q_data[3][i]},
14023d6ba15SJames Wright         {q_data[4][i], q_data[5][i], q_data[6][i]},
14123d6ba15SJames Wright         {q_data[7][i], q_data[8][i], q_data[9][i]}
14288b783a1SJames Wright     };
1435c677226SJed Brown     State grad_s[3];
144*7b69c783SJames Wright     for (CeedInt k = 0; k < 3; k++) {
1456f00d0e6SJed Brown       CeedScalar dx_i[3] = {0}, dU[5];
146*7b69c783SJames Wright       for (CeedInt j = 0; j < 5; j++) dU[j] = Grad_q[0][j][i] * dXdx[0][k] + Grad_q[1][j][i] * dXdx[1][k] + Grad_q[2][j][i] * dXdx[2][k];
147*7b69c783SJames Wright       dx_i[k]   = 1.;
148*7b69c783SJames Wright       grad_s[k] = StateFromU_fwd(context, s, dU, x_i, dx_i);
1495c677226SJed Brown     }
1505c677226SJed Brown 
1515c677226SJed Brown     CeedScalar strain_rate[6], kmstress[6], stress[3][3], Fe[3];
152d08fcc28SJames Wright     KMStrainRate_State(grad_s, strain_rate);
1535c677226SJed Brown     NewtonianStress(context, strain_rate, kmstress);
1545c677226SJed Brown     KMUnpack(kmstress, stress);
1555c677226SJed Brown     ViscousEnergyFlux(context, s.Y, grad_s, stress, Fe);
1565c677226SJed Brown 
1575c677226SJed Brown     StateConservative F_inviscid[3];
1585c677226SJed Brown     FluxInviscid(context, s, F_inviscid);
1595c677226SJed Brown 
1605c677226SJed Brown     // Total flux
1615c677226SJed Brown     CeedScalar Flux[5][3];
1622b89d87eSLeila Ghaffari     FluxTotal(F_inviscid, stress, Fe, Flux);
1635c677226SJed Brown 
164*7b69c783SJames Wright     for (CeedInt j = 0; j < 5; j++) {
165*7b69c783SJames Wright       for (CeedInt k = 0; k < 3; k++) Grad_v[k][j][i] = wdetJ * (dXdx[k][0] * Flux[j][0] + dXdx[k][1] * Flux[j][1] + dXdx[k][2] * Flux[j][2]);
1662b730f8bSJeremy L Thompson     }
1675c677226SJed Brown 
1685c677226SJed Brown     const CeedScalar body_force[5] = {0, s.U.density * g[0], s.U.density * g[1], s.U.density * g[2], 0};
1692b730f8bSJeremy L Thompson     for (int j = 0; j < 5; j++) v[j][i] = wdetJ * body_force[j];
17088b783a1SJames Wright 
1712b89d87eSLeila Ghaffari     // -- Stabilization method: none (Galerkin), SU, or SUPG
1722b89d87eSLeila Ghaffari     CeedScalar Tau_d[3], stab[5][3], U_dot[5] = {0};
1732b89d87eSLeila Ghaffari     Tau_diagPrim(context, s, dXdx, dt, Tau_d);
1742b89d87eSLeila Ghaffari     Stabilization(context, s, Tau_d, grad_s, U_dot, body_force, x_i, stab);
17588b783a1SJames Wright 
1762b730f8bSJeremy L Thompson     for (CeedInt j = 0; j < 5; j++) {
1772b730f8bSJeremy L Thompson       for (CeedInt k = 0; k < 3; k++) Grad_v[k][j][i] -= wdetJ * (stab[j][0] * dXdx[k][0] + stab[j][1] * dXdx[k][1] + stab[j][2] * dXdx[k][2]);
1782b730f8bSJeremy L Thompson     }
17988b783a1SJames Wright   }  // End Quadrature Point Loop
18088b783a1SJames Wright 
18188b783a1SJames Wright   // Return
18288b783a1SJames Wright   return 0;
18388b783a1SJames Wright }
18488b783a1SJames Wright 
18588b783a1SJames Wright // *****************************************************************************
186ea61e9acSJeremy L Thompson // This QFunction implements the Navier-Stokes equations (mentioned above) with implicit time stepping method
18788b783a1SJames Wright //
18888b783a1SJames Wright //  SU   = Galerkin + grad(v) . ( Ai^T * Tau * (Aj q,j) )
18988b783a1SJames Wright //  SUPG = Galerkin + grad(v) . ( Ai^T * Tau * (q_dot + Aj q,j - body force) )
190ea61e9acSJeremy L Thompson //                                       (diffusive terms will be added later)
19188b783a1SJames Wright // *****************************************************************************
192be91e165SJames Wright CEED_QFUNCTION_HELPER int IFunction_Newtonian(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) {
19388b783a1SJames Wright   // Inputs
19446603fc5SJames Wright   const CeedScalar(*q)[CEED_Q_VLA]         = (const CeedScalar(*)[CEED_Q_VLA])in[0];
19546603fc5SJames Wright   const CeedScalar(*Grad_q)[5][CEED_Q_VLA] = (const CeedScalar(*)[5][CEED_Q_VLA])in[1];
19646603fc5SJames Wright   const CeedScalar(*q_dot)[CEED_Q_VLA]     = (const CeedScalar(*)[CEED_Q_VLA])in[2];
19746603fc5SJames Wright   const CeedScalar(*q_data)[CEED_Q_VLA]    = (const CeedScalar(*)[CEED_Q_VLA])in[3];
19846603fc5SJames Wright   const CeedScalar(*x)[CEED_Q_VLA]         = (const CeedScalar(*)[CEED_Q_VLA])in[4];
19946603fc5SJames Wright 
20088b783a1SJames Wright   // Outputs
20146603fc5SJames Wright   CeedScalar(*v)[CEED_Q_VLA]         = (CeedScalar(*)[CEED_Q_VLA])out[0];
20246603fc5SJames Wright   CeedScalar(*Grad_v)[5][CEED_Q_VLA] = (CeedScalar(*)[5][CEED_Q_VLA])out[1];
20346603fc5SJames Wright   CeedScalar(*jac_data)[CEED_Q_VLA]  = (CeedScalar(*)[CEED_Q_VLA])out[2];
20446603fc5SJames Wright 
20588b783a1SJames Wright   // Context
20688b783a1SJames Wright   NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx;
20788626eedSJames Wright   const CeedScalar        *g       = context->g;
20888626eedSJames Wright   const CeedScalar         dt      = context->dt;
209530ad8c4SKenneth E. Jansen   const CeedScalar         P0      = context->P0;
21088b783a1SJames Wright 
21188b783a1SJames Wright   // Quadrature Point Loop
21246603fc5SJames Wright   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
21346603fc5SJames Wright     const CeedScalar qi[5]  = {q[0][i], q[1][i], q[2][i], q[3][i], q[4][i]};
2145c677226SJed Brown     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
215be91e165SJames Wright     const State      s      = StateFromQ(context, qi, x_i, state_var);
2165c677226SJed Brown 
21788b783a1SJames Wright     // -- Interp-to-Interp q_data
21888b783a1SJames Wright     const CeedScalar wdetJ = q_data[0][i];
21988b783a1SJames Wright     // -- Interp-to-Grad q_data
22088b783a1SJames Wright     // ---- Inverse of change of coordinate matrix: X_i,j
2212b730f8bSJeremy L Thompson     const CeedScalar dXdx[3][3] = {
2222b730f8bSJeremy L Thompson         {q_data[1][i], q_data[2][i], q_data[3][i]},
22323d6ba15SJames Wright         {q_data[4][i], q_data[5][i], q_data[6][i]},
22423d6ba15SJames Wright         {q_data[7][i], q_data[8][i], q_data[9][i]}
22588b783a1SJames Wright     };
2265c677226SJed Brown     State grad_s[3];
227*7b69c783SJames Wright     for (CeedInt k = 0; k < 3; k++) {
2283d02368aSJames Wright       CeedScalar dx_i[3] = {0}, dqi[5];
229*7b69c783SJames Wright       for (CeedInt j = 0; j < 5; j++) {
230*7b69c783SJames Wright         dqi[j] = Grad_q[0][j][i] * dXdx[0][k] + Grad_q[1][j][i] * dXdx[1][k] + Grad_q[2][j][i] * dXdx[2][k];
23146603fc5SJames Wright       }
232*7b69c783SJames Wright       dx_i[k]   = 1.;
233*7b69c783SJames Wright       grad_s[k] = StateFromQ_fwd(context, s, dqi, x_i, dx_i, state_var);
23488b783a1SJames Wright     }
2355c677226SJed Brown 
2365c677226SJed Brown     CeedScalar strain_rate[6], kmstress[6], stress[3][3], Fe[3];
237d08fcc28SJames Wright     KMStrainRate_State(grad_s, strain_rate);
2385c677226SJed Brown     NewtonianStress(context, strain_rate, kmstress);
2395c677226SJed Brown     KMUnpack(kmstress, stress);
2405c677226SJed Brown     ViscousEnergyFlux(context, s.Y, grad_s, stress, Fe);
2415c677226SJed Brown 
2425c677226SJed Brown     StateConservative F_inviscid[3];
2435c677226SJed Brown     FluxInviscid(context, s, F_inviscid);
2445c677226SJed Brown 
2455c677226SJed Brown     // Total flux
2465c677226SJed Brown     CeedScalar Flux[5][3];
2472b89d87eSLeila Ghaffari     FluxTotal(F_inviscid, stress, Fe, Flux);
2485c677226SJed Brown 
249*7b69c783SJames Wright     for (CeedInt j = 0; j < 5; j++) {
250*7b69c783SJames Wright       for (CeedInt k = 0; k < 3; k++) {
251*7b69c783SJames Wright         Grad_v[k][j][i] = -wdetJ * (dXdx[k][0] * Flux[j][0] + dXdx[k][1] * Flux[j][1] + dXdx[k][2] * Flux[j][2]);
25246603fc5SJames Wright       }
2532b730f8bSJeremy L Thompson     }
2545c677226SJed Brown 
2555c677226SJed Brown     const CeedScalar body_force[5] = {0, s.U.density * g[0], s.U.density * g[1], s.U.density * g[2], 0};
25688b783a1SJames Wright 
2572b89d87eSLeila Ghaffari     // -- Stabilization method: none (Galerkin), SU, or SUPG
2583d02368aSJames Wright     CeedScalar Tau_d[3], stab[5][3], U_dot[5] = {0}, qi_dot[5], dx0[3] = {0};
2593d02368aSJames Wright     for (int j = 0; j < 5; j++) qi_dot[j] = q_dot[j][i];
260be91e165SJames Wright     State s_dot = StateFromQ_fwd(context, s, qi_dot, x_i, dx0, state_var);
2613d02368aSJames Wright     UnpackState_U(s_dot.U, U_dot);
2623d02368aSJames Wright 
2632b730f8bSJeremy L Thompson     for (CeedInt j = 0; j < 5; j++) v[j][i] = wdetJ * (U_dot[j] - body_force[j]);
264530ad8c4SKenneth E. Jansen     if (context->idl_enable) {
265530ad8c4SKenneth E. Jansen       CeedScalar damp_state[5] = {s.Y.pressure - P0, 0, 0, 0, 0}, idl_residual[5] = {0.};
266530ad8c4SKenneth E. Jansen       InternalDampingLayer(context, s, x_i, damp_state, idl_residual);
267530ad8c4SKenneth E. Jansen       for (int j = 0; j < 5; j++) v[j][i] += wdetJ * idl_residual[j];
268530ad8c4SKenneth E. Jansen     }
269530ad8c4SKenneth E. Jansen 
2702b89d87eSLeila Ghaffari     Tau_diagPrim(context, s, dXdx, dt, Tau_d);
2712b89d87eSLeila Ghaffari     Stabilization(context, s, Tau_d, grad_s, U_dot, body_force, x_i, stab);
27288b783a1SJames Wright 
2732b730f8bSJeremy L Thompson     for (CeedInt j = 0; j < 5; j++) {
27446603fc5SJames Wright       for (CeedInt k = 0; k < 3; k++) {
27546603fc5SJames Wright         Grad_v[k][j][i] += wdetJ * (stab[j][0] * dXdx[k][0] + stab[j][1] * dXdx[k][1] + stab[j][2] * dXdx[k][2]);
27646603fc5SJames Wright       }
2772b730f8bSJeremy L Thompson     }
2783d02368aSJames Wright     for (CeedInt j = 0; j < 5; j++) jac_data[j][i] = qi[j];
2793c4b7af6SJed Brown     for (CeedInt j = 0; j < 6; j++) jac_data[5 + j][i] = kmstress[j];
2803c4b7af6SJed Brown     for (CeedInt j = 0; j < 3; j++) jac_data[5 + 6 + j][i] = Tau_d[j];
28188b783a1SJames Wright 
28288b783a1SJames Wright   }  // End Quadrature Point Loop
28388b783a1SJames Wright 
28488b783a1SJames Wright   // Return
28588b783a1SJames Wright   return 0;
28688b783a1SJames Wright }
287e334ad8fSJed Brown 
2882b730f8bSJeremy L Thompson CEED_QFUNCTION(IFunction_Newtonian_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
289be91e165SJames Wright   return IFunction_Newtonian(ctx, Q, in, out, STATEVAR_CONSERVATIVE);
2903d02368aSJames Wright }
2913d02368aSJames Wright 
2922b730f8bSJeremy L Thompson CEED_QFUNCTION(IFunction_Newtonian_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
293be91e165SJames Wright   return IFunction_Newtonian(ctx, Q, in, out, STATEVAR_PRIMITIVE);
2943d02368aSJames Wright }
2953d02368aSJames Wright 
296dc805cc4SLeila Ghaffari // *****************************************************************************
297ea61e9acSJeremy L Thompson // This QFunction implements the jacobian of the Navier-Stokes equations for implicit time stepping method.
298dc805cc4SLeila Ghaffari // *****************************************************************************
299be91e165SJames Wright CEED_QFUNCTION_HELPER int IJacobian_Newtonian(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) {
300e334ad8fSJed Brown   // Inputs
30146603fc5SJames Wright   const CeedScalar(*dq)[CEED_Q_VLA]         = (const CeedScalar(*)[CEED_Q_VLA])in[0];
30246603fc5SJames Wright   const CeedScalar(*Grad_dq)[5][CEED_Q_VLA] = (const CeedScalar(*)[5][CEED_Q_VLA])in[1];
30346603fc5SJames Wright   const CeedScalar(*q_data)[CEED_Q_VLA]     = (const CeedScalar(*)[CEED_Q_VLA])in[2];
30446603fc5SJames Wright   const CeedScalar(*x)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[3];
30546603fc5SJames Wright   const CeedScalar(*jac_data)[CEED_Q_VLA]   = (const CeedScalar(*)[CEED_Q_VLA])in[4];
30646603fc5SJames Wright 
307e334ad8fSJed Brown   // Outputs
30846603fc5SJames Wright   CeedScalar(*v)[CEED_Q_VLA]         = (CeedScalar(*)[CEED_Q_VLA])out[0];
30946603fc5SJames Wright   CeedScalar(*Grad_v)[5][CEED_Q_VLA] = (CeedScalar(*)[5][CEED_Q_VLA])out[1];
31046603fc5SJames Wright 
311e334ad8fSJed Brown   // Context
312e334ad8fSJed Brown   NewtonianIdealGasContext context = (NewtonianIdealGasContext)ctx;
313e334ad8fSJed Brown   const CeedScalar        *g       = context->g;
314e334ad8fSJed Brown 
315e334ad8fSJed Brown   // Quadrature Point Loop
31646603fc5SJames Wright   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
317e334ad8fSJed Brown     // -- Interp-to-Interp q_data
318e334ad8fSJed Brown     const CeedScalar wdetJ = q_data[0][i];
319e334ad8fSJed Brown     // -- Interp-to-Grad q_data
320e334ad8fSJed Brown     // ---- Inverse of change of coordinate matrix: X_i,j
3212b730f8bSJeremy L Thompson     const CeedScalar dXdx[3][3] = {
3222b730f8bSJeremy L Thompson         {q_data[1][i], q_data[2][i], q_data[3][i]},
32323d6ba15SJames Wright         {q_data[4][i], q_data[5][i], q_data[6][i]},
32423d6ba15SJames Wright         {q_data[7][i], q_data[8][i], q_data[9][i]}
325e334ad8fSJed Brown     };
326e334ad8fSJed Brown 
327c98a0616SJames Wright     CeedScalar qi[5], kmstress[6], Tau_d[3];
3283d02368aSJames Wright     for (int j = 0; j < 5; j++) qi[j] = jac_data[j][i];
329e334ad8fSJed Brown     for (int j = 0; j < 6; j++) kmstress[j] = jac_data[5 + j][i];
330e334ad8fSJed Brown     for (int j = 0; j < 3; j++) Tau_d[j] = jac_data[5 + 6 + j][i];
331e334ad8fSJed Brown     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
332be91e165SJames Wright     State            s      = StateFromQ(context, qi, x_i, state_var);
333e334ad8fSJed Brown 
3343d02368aSJames Wright     CeedScalar dqi[5], dx0[3] = {0};
3353d02368aSJames Wright     for (int j = 0; j < 5; j++) dqi[j] = dq[j][i];
336be91e165SJames Wright     State ds = StateFromQ_fwd(context, s, dqi, x_i, dx0, state_var);
337e334ad8fSJed Brown 
338e334ad8fSJed Brown     State grad_ds[3];
339*7b69c783SJames Wright     for (int k = 0; k < 3; k++) {
3403d02368aSJames Wright       CeedScalar dqi_j[5];
341*7b69c783SJames Wright       for (int j = 0; j < 5; j++) dqi_j[j] = Grad_dq[0][j][i] * dXdx[0][k] + Grad_dq[1][j][i] * dXdx[1][k] + Grad_dq[2][j][i] * dXdx[2][k];
342*7b69c783SJames Wright       grad_ds[k] = StateFromQ_fwd(context, s, dqi_j, x_i, dx0, state_var);
343e334ad8fSJed Brown     }
344e334ad8fSJed Brown 
345e334ad8fSJed Brown     CeedScalar dstrain_rate[6], dkmstress[6], stress[3][3], dstress[3][3], dFe[3];
346d08fcc28SJames Wright     KMStrainRate_State(grad_ds, dstrain_rate);
347e334ad8fSJed Brown     NewtonianStress(context, dstrain_rate, dkmstress);
348e334ad8fSJed Brown     KMUnpack(dkmstress, dstress);
349e334ad8fSJed Brown     KMUnpack(kmstress, stress);
350e334ad8fSJed Brown     ViscousEnergyFlux_fwd(context, s.Y, ds.Y, grad_ds, stress, dstress, dFe);
351e334ad8fSJed Brown 
352e334ad8fSJed Brown     StateConservative dF_inviscid[3];
353e334ad8fSJed Brown     FluxInviscid_fwd(context, s, ds, dF_inviscid);
354e334ad8fSJed Brown 
355e334ad8fSJed Brown     // Total flux
356e334ad8fSJed Brown     CeedScalar dFlux[5][3];
3572b89d87eSLeila Ghaffari     FluxTotal(dF_inviscid, dstress, dFe, dFlux);
358e334ad8fSJed Brown 
35951b00d91SJames Wright     for (int j = 0; j < 5; j++) {
36051b00d91SJames Wright       for (int k = 0; k < 3; k++) Grad_v[k][j][i] = -wdetJ * (dXdx[k][0] * dFlux[j][0] + dXdx[k][1] * dFlux[j][1] + dXdx[k][2] * dFlux[j][2]);
3612b730f8bSJeremy L Thompson     }
362e334ad8fSJed Brown 
363e334ad8fSJed Brown     const CeedScalar dbody_force[5] = {0, ds.U.density * g[0], ds.U.density * g[1], ds.U.density * g[2], 0};
3643d02368aSJames Wright     CeedScalar       dU[5]          = {0.};
3653d02368aSJames Wright     UnpackState_U(ds.U, dU);
3662b730f8bSJeremy L Thompson     for (int j = 0; j < 5; j++) v[j][i] = wdetJ * (context->ijacobian_time_shift * dU[j] - dbody_force[j]);
367e334ad8fSJed Brown 
368530ad8c4SKenneth E. Jansen     if (context->idl_enable) {
369530ad8c4SKenneth E. Jansen       CeedScalar damp_state[5] = {ds.Y.pressure, 0, 0, 0, 0}, idl_residual[5] = {0.};
370530ad8c4SKenneth E. Jansen       // This is a Picard-type linearization of the damping and could be replaced by an InternalDampingLayer_fwd that uses s and ds.
371530ad8c4SKenneth E. Jansen       InternalDampingLayer(context, s, x_i, damp_state, idl_residual);
372530ad8c4SKenneth E. Jansen       for (int j = 0; j < 5; j++) v[j][i] += wdetJ * idl_residual[j];
373530ad8c4SKenneth E. Jansen     }
374530ad8c4SKenneth E. Jansen 
3752b89d87eSLeila Ghaffari     // -- Stabilization method: none (Galerkin), SU, or SUPG
3762b89d87eSLeila Ghaffari     CeedScalar dstab[5][3], U_dot[5] = {0};
3772b89d87eSLeila Ghaffari     for (CeedInt j = 0; j < 5; j++) U_dot[j] = context->ijacobian_time_shift * dU[j];
3782b89d87eSLeila Ghaffari     Stabilization(context, s, Tau_d, grad_ds, U_dot, dbody_force, x_i, dstab);
3792b89d87eSLeila Ghaffari 
3802b730f8bSJeremy L Thompson     for (int j = 0; j < 5; j++) {
3812b730f8bSJeremy L Thompson       for (int k = 0; k < 3; k++) Grad_v[k][j][i] += wdetJ * (dstab[j][0] * dXdx[k][0] + dstab[j][1] * dXdx[k][1] + dstab[j][2] * dXdx[k][2]);
3822b730f8bSJeremy L Thompson     }
383e334ad8fSJed Brown   }  // End Quadrature Point Loop
384e334ad8fSJed Brown   return 0;
385e334ad8fSJed Brown }
38665dd5cafSJames Wright 
3872b730f8bSJeremy L Thompson CEED_QFUNCTION(IJacobian_Newtonian_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
388be91e165SJames Wright   return IJacobian_Newtonian(ctx, Q, in, out, STATEVAR_CONSERVATIVE);
3893d02368aSJames Wright }
3903d02368aSJames Wright 
3912b730f8bSJeremy L Thompson CEED_QFUNCTION(IJacobian_Newtonian_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
392be91e165SJames Wright   return IJacobian_Newtonian(ctx, Q, in, out, STATEVAR_PRIMITIVE);
3933d02368aSJames Wright }
3943d02368aSJames Wright 
3952b89d87eSLeila Ghaffari // *****************************************************************************
39665dd5cafSJames Wright // Compute boundary integral (ie. for strongly set inflows)
3972b89d87eSLeila Ghaffari // *****************************************************************************
398be91e165SJames Wright CEED_QFUNCTION_HELPER int BoundaryIntegral(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) {
39946603fc5SJames Wright   const CeedScalar(*q)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[0];
40046603fc5SJames Wright   const CeedScalar(*Grad_q)[5][CEED_Q_VLA]  = (const CeedScalar(*)[5][CEED_Q_VLA])in[1];
40146603fc5SJames Wright   const CeedScalar(*q_data_sur)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[2];
40246603fc5SJames Wright   const CeedScalar(*x)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[3];
40365dd5cafSJames Wright 
40446603fc5SJames Wright   CeedScalar(*v)[CEED_Q_VLA]            = (CeedScalar(*)[CEED_Q_VLA])out[0];
40546603fc5SJames Wright   CeedScalar(*jac_data_sur)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[1];
40665dd5cafSJames Wright 
4072c4e60d7SJames Wright   const NewtonianIdealGasContext context     = (NewtonianIdealGasContext)ctx;
4082c4e60d7SJames Wright   const bool                     is_implicit = context->is_implicit;
40965dd5cafSJames Wright 
4102b730f8bSJeremy L Thompson   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
4112c4e60d7SJames Wright     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
412efe9d856SJames Wright     const CeedScalar qi[5]  = {q[0][i], q[1][i], q[2][i], q[3][i], q[4][i]};
413be91e165SJames Wright     State            s      = StateFromQ(context, qi, x_i, state_var);
41465dd5cafSJames Wright 
41565dd5cafSJames Wright     const CeedScalar wdetJb = (is_implicit ? -1. : 1.) * q_data_sur[0][i];
4165bce47c7SJames Wright     // ---- Normal vector
4172b730f8bSJeremy L Thompson     const CeedScalar norm[3] = {q_data_sur[1][i], q_data_sur[2][i], q_data_sur[3][i]};
41865dd5cafSJames Wright 
4192c4e60d7SJames Wright     const CeedScalar dXdx[2][3] = {
4202c4e60d7SJames Wright         {q_data_sur[4][i], q_data_sur[5][i], q_data_sur[6][i]},
4212c4e60d7SJames Wright         {q_data_sur[7][i], q_data_sur[8][i], q_data_sur[9][i]}
4222c4e60d7SJames Wright     };
42365dd5cafSJames Wright 
4242c4e60d7SJames Wright     State grad_s[3];
425*7b69c783SJames Wright     for (CeedInt k = 0; k < 3; k++) {
426efe9d856SJames Wright       CeedScalar dx_i[3] = {0}, dqi[5];
427*7b69c783SJames Wright       for (CeedInt j = 0; j < 5; j++) dqi[j] = Grad_q[0][j][i] * dXdx[0][k] + Grad_q[1][j][i] * dXdx[1][k];
428*7b69c783SJames Wright       dx_i[k]   = 1.;
429*7b69c783SJames Wright       grad_s[k] = StateFromQ_fwd(context, s, dqi, x_i, dx_i, state_var);
4302c4e60d7SJames Wright     }
43165dd5cafSJames Wright 
4322c4e60d7SJames Wright     CeedScalar strain_rate[6], kmstress[6], stress[3][3], Fe[3];
433d08fcc28SJames Wright     KMStrainRate_State(grad_s, strain_rate);
4342c4e60d7SJames Wright     NewtonianStress(context, strain_rate, kmstress);
4352c4e60d7SJames Wright     KMUnpack(kmstress, stress);
4362c4e60d7SJames Wright     ViscousEnergyFlux(context, s.Y, grad_s, stress, Fe);
4372c4e60d7SJames Wright 
4382c4e60d7SJames Wright     StateConservative F_inviscid[3];
4392c4e60d7SJames Wright     FluxInviscid(context, s, F_inviscid);
4402c4e60d7SJames Wright 
4415bce47c7SJames Wright     CeedScalar Flux[5];
4425bce47c7SJames Wright     FluxTotal_Boundary(F_inviscid, stress, Fe, norm, Flux);
4432c4e60d7SJames Wright 
4445bce47c7SJames Wright     for (CeedInt j = 0; j < 5; j++) v[j][i] = -wdetJb * Flux[j];
44565dd5cafSJames Wright 
4465bce47c7SJames Wright     for (int j = 0; j < 5; j++) jac_data_sur[j][i] = qi[j];
447b55ac660SJames Wright     for (int j = 0; j < 6; j++) jac_data_sur[5 + j][i] = kmstress[j];
44865dd5cafSJames Wright   }
44965dd5cafSJames Wright   return 0;
45065dd5cafSJames Wright }
45165dd5cafSJames Wright 
4522b730f8bSJeremy L Thompson CEED_QFUNCTION(BoundaryIntegral_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
453be91e165SJames Wright   return BoundaryIntegral(ctx, Q, in, out, STATEVAR_CONSERVATIVE);
45420840d50SJames Wright }
45520840d50SJames Wright 
4562b730f8bSJeremy L Thompson CEED_QFUNCTION(BoundaryIntegral_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
457be91e165SJames Wright   return BoundaryIntegral(ctx, Q, in, out, STATEVAR_PRIMITIVE);
45820840d50SJames Wright }
45920840d50SJames Wright 
4602b89d87eSLeila Ghaffari // *****************************************************************************
461b55ac660SJames Wright // Jacobian for "set nothing" boundary integral
4622b89d87eSLeila Ghaffari // *****************************************************************************
4632b730f8bSJeremy L Thompson CEED_QFUNCTION_HELPER int BoundaryIntegral_Jacobian(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out,
464be91e165SJames Wright                                                     StateVariable state_var) {
465b55ac660SJames Wright   // Inputs
46646603fc5SJames Wright   const CeedScalar(*dq)[CEED_Q_VLA]           = (const CeedScalar(*)[CEED_Q_VLA])in[0];
46746603fc5SJames Wright   const CeedScalar(*Grad_dq)[5][CEED_Q_VLA]   = (const CeedScalar(*)[5][CEED_Q_VLA])in[1];
46846603fc5SJames Wright   const CeedScalar(*q_data_sur)[CEED_Q_VLA]   = (const CeedScalar(*)[CEED_Q_VLA])in[2];
46946603fc5SJames Wright   const CeedScalar(*x)[CEED_Q_VLA]            = (const CeedScalar(*)[CEED_Q_VLA])in[3];
47046603fc5SJames Wright   const CeedScalar(*jac_data_sur)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[4];
47146603fc5SJames Wright 
472b55ac660SJames Wright   // Outputs
473b55ac660SJames Wright   CeedScalar(*v)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0];
474b55ac660SJames Wright 
475b55ac660SJames Wright   const NewtonianIdealGasContext context  = (NewtonianIdealGasContext)ctx;
476b55ac660SJames Wright   const bool                     implicit = context->is_implicit;
477b55ac660SJames Wright 
478b55ac660SJames Wright   // Quadrature Point Loop
47946603fc5SJames Wright   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
480b55ac660SJames Wright     const CeedScalar x_i[3]     = {x[0][i], x[1][i], x[2][i]};
481b55ac660SJames Wright     const CeedScalar wdetJb     = (implicit ? -1. : 1.) * q_data_sur[0][i];
4822b730f8bSJeremy L Thompson     const CeedScalar norm[3]    = {q_data_sur[1][i], q_data_sur[2][i], q_data_sur[3][i]};
483b55ac660SJames Wright     const CeedScalar dXdx[2][3] = {
484b55ac660SJames Wright         {q_data_sur[4][i], q_data_sur[5][i], q_data_sur[6][i]},
485b55ac660SJames Wright         {q_data_sur[7][i], q_data_sur[8][i], q_data_sur[9][i]}
486b55ac660SJames Wright     };
487b55ac660SJames Wright 
488efe9d856SJames Wright     CeedScalar qi[5], kmstress[6], dqi[5], dx_i[3] = {0.};
489efe9d856SJames Wright     for (int j = 0; j < 5; j++) qi[j] = jac_data_sur[j][i];
490b55ac660SJames Wright     for (int j = 0; j < 6; j++) kmstress[j] = jac_data_sur[5 + j][i];
491efe9d856SJames Wright     for (int j = 0; j < 5; j++) dqi[j] = dq[j][i];
49257e55a1cSJames Wright 
493be91e165SJames Wright     State s  = StateFromQ(context, qi, x_i, state_var);
494be91e165SJames Wright     State ds = StateFromQ_fwd(context, s, dqi, x_i, dx_i, state_var);
495b55ac660SJames Wright 
496b55ac660SJames Wright     State grad_ds[3];
497*7b69c783SJames Wright     for (CeedInt k = 0; k < 3; k++) {
498efe9d856SJames Wright       CeedScalar dx_i[3] = {0}, dqi_j[5];
499*7b69c783SJames Wright       for (CeedInt j = 0; j < 5; j++) dqi_j[j] = Grad_dq[0][j][i] * dXdx[0][k] + Grad_dq[1][j][i] * dXdx[1][k];
500*7b69c783SJames Wright       dx_i[k]    = 1.;
501*7b69c783SJames Wright       grad_ds[k] = StateFromQ_fwd(context, s, dqi_j, x_i, dx_i, state_var);
502b55ac660SJames Wright     }
503b55ac660SJames Wright 
504b55ac660SJames Wright     CeedScalar dstrain_rate[6], dkmstress[6], stress[3][3], dstress[3][3], dFe[3];
505d08fcc28SJames Wright     KMStrainRate_State(grad_ds, dstrain_rate);
506b55ac660SJames Wright     NewtonianStress(context, dstrain_rate, dkmstress);
507b55ac660SJames Wright     KMUnpack(dkmstress, dstress);
508b55ac660SJames Wright     KMUnpack(kmstress, stress);
509b55ac660SJames Wright     ViscousEnergyFlux_fwd(context, s.Y, ds.Y, grad_ds, stress, dstress, dFe);
510b55ac660SJames Wright 
511b55ac660SJames Wright     StateConservative dF_inviscid[3];
512b55ac660SJames Wright     FluxInviscid_fwd(context, s, ds, dF_inviscid);
513b55ac660SJames Wright 
5145bce47c7SJames Wright     CeedScalar dFlux[5];
5155bce47c7SJames Wright     FluxTotal_Boundary(dF_inviscid, dstress, dFe, norm, dFlux);
516b55ac660SJames Wright 
5175bce47c7SJames Wright     for (int j = 0; j < 5; j++) v[j][i] = -wdetJb * dFlux[j];
518b55ac660SJames Wright   }  // End Quadrature Point Loop
519b55ac660SJames Wright   return 0;
520b55ac660SJames Wright }
521b55ac660SJames Wright 
5222b730f8bSJeremy L Thompson CEED_QFUNCTION(BoundaryIntegral_Jacobian_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
523be91e165SJames Wright   return BoundaryIntegral_Jacobian(ctx, Q, in, out, STATEVAR_CONSERVATIVE);
52420840d50SJames Wright }
52520840d50SJames Wright 
5262b730f8bSJeremy L Thompson CEED_QFUNCTION(BoundaryIntegral_Jacobian_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
527be91e165SJames Wright   return BoundaryIntegral_Jacobian(ctx, Q, in, out, STATEVAR_PRIMITIVE);
52820840d50SJames Wright }
52920840d50SJames Wright 
53088b783a1SJames Wright #endif  // newtonian_h
531