13d8e8822SJeremy L Thompson // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 23d8e8822SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 3cb32e2e7SValeria Barra // 43d8e8822SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause 5cb32e2e7SValeria Barra // 63d8e8822SJeremy L Thompson // This file is part of CEED: http://github.com/ceed 7cb32e2e7SValeria Barra 8cb32e2e7SValeria Barra /// @file 9cb32e2e7SValeria Barra /// libCEED QFunctions for diffusion operator example using PETSc 10cb32e2e7SValeria Barra 1113921685Svaleriabarra #ifndef bp3_h 1213921685Svaleriabarra #define bp3_h 1313921685Svaleriabarra 14c9c2c079SJeremy L Thompson #include <ceed.h> 1513921685Svaleriabarra #include <math.h> 1613921685Svaleriabarra 17e83e87a5Sjeremylt // ----------------------------------------------------------------------------- 18ed264d09SValeria Barra // This QFunction sets up the geometric factors required to apply the 19ed264d09SValeria Barra // diffusion operator 20ed264d09SValeria Barra // 21ed264d09SValeria Barra // We require the product of the inverse of the Jacobian and its transpose to 22ed264d09SValeria Barra // properly compute integrals of the form: int( gradv gradu) 23ed264d09SValeria Barra // 24ed264d09SValeria Barra // Determinant of Jacobian: 25ed264d09SValeria Barra // detJ = J11*A11 + J21*A12 + J31*A13 26ed264d09SValeria Barra // Jij = Jacobian entry ij 27ed264d09SValeria Barra // Aij = Adjoint ij 28ed264d09SValeria Barra // 29ed264d09SValeria Barra // Inverse of Jacobian: 30ed264d09SValeria Barra // Bij = Aij / detJ 31ed264d09SValeria Barra // 32ed264d09SValeria Barra // Product of Inverse and Transpose: 33ed264d09SValeria Barra // BBij = sum( Bik Bkj ) 34ed264d09SValeria Barra // 35ed264d09SValeria Barra // Stored: w B^T B detJ = w A^T A / detJ 36ed264d09SValeria Barra // Note: This matrix is symmetric, so we only store 6 distinct entries 370a8fc04aSrezgarshakeri // qd: 1 4 7 38ed264d09SValeria Barra // 2 5 8 390a8fc04aSrezgarshakeri // 3 6 9 40cb32e2e7SValeria Barra // ----------------------------------------------------------------------------- 41*2b730f8bSJeremy L Thompson CEED_QFUNCTION(SetupDiffGeo)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 42d4d45553Srezgarshakeri // Inputs 43d4d45553Srezgarshakeri const CeedScalar(*J)[3][CEED_Q_VLA] = (const CeedScalar(*)[3][CEED_Q_VLA])in[1]; 44d4d45553Srezgarshakeri const CeedScalar(*w) = in[2]; // Note: *X = in[0] 45d4d45553Srezgarshakeri // Outputs 46d4d45553Srezgarshakeri CeedScalar(*qd) = out[0]; 47cb32e2e7SValeria Barra 48d4d45553Srezgarshakeri const CeedInt dim = 3; 49cb32e2e7SValeria Barra // Quadrature Point Loop 50*2b730f8bSJeremy L Thompson CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 51d4d45553Srezgarshakeri // Setup 52d4d45553Srezgarshakeri CeedScalar A[3][3]; 53d4d45553Srezgarshakeri for (CeedInt j = 0; j < dim; j++) { 54d4d45553Srezgarshakeri for (CeedInt k = 0; k < dim; k++) { 55d4d45553Srezgarshakeri // Equivalent code with no mod operations: 56d4d45553Srezgarshakeri // A[k][j] = J[k+1][j+1]*J[k+2][j+2] - J[k+1][j+2]*J[k+2][j+1] 57d4d45553Srezgarshakeri A[k][j] = J[(k + 1) % dim][(j + 1) % dim][i] * J[(k + 2) % dim][(j + 2) % dim][i] - 58d4d45553Srezgarshakeri J[(k + 1) % dim][(j + 2) % dim][i] * J[(k + 2) % dim][(j + 1) % dim][i]; 59d4d45553Srezgarshakeri } 60d4d45553Srezgarshakeri } 61d4d45553Srezgarshakeri const CeedScalar detJ = J[0][0][i] * A[0][0] + J[0][1][i] * A[0][1] + J[0][2][i] * A[0][2]; 62d4d45553Srezgarshakeri 63d4d45553Srezgarshakeri const CeedScalar qw = w[i] / detJ; 640a8fc04aSrezgarshakeri qd[i + Q * 0] = w[i] * detJ; 650a8fc04aSrezgarshakeri qd[i + Q * 1] = qw * (A[0][0] * A[0][0] + A[0][1] * A[0][1] + A[0][2] * A[0][2]); 660a8fc04aSrezgarshakeri qd[i + Q * 2] = qw * (A[0][0] * A[1][0] + A[0][1] * A[1][1] + A[0][2] * A[1][2]); 670a8fc04aSrezgarshakeri qd[i + Q * 3] = qw * (A[0][0] * A[2][0] + A[0][1] * A[2][1] + A[0][2] * A[2][2]); 680a8fc04aSrezgarshakeri qd[i + Q * 4] = qw * (A[1][0] * A[1][0] + A[1][1] * A[1][1] + A[1][2] * A[1][2]); 690a8fc04aSrezgarshakeri qd[i + Q * 5] = qw * (A[1][0] * A[2][0] + A[1][1] * A[2][1] + A[1][2] * A[2][2]); 700a8fc04aSrezgarshakeri qd[i + Q * 6] = qw * (A[2][0] * A[2][0] + A[2][1] * A[2][1] + A[2][2] * A[2][2]); 71cb32e2e7SValeria Barra } // End of Quadrature Point Loop 72cb32e2e7SValeria Barra 73cb32e2e7SValeria Barra return 0; 74cb32e2e7SValeria Barra } 75cb32e2e7SValeria Barra 76e83e87a5Sjeremylt // ----------------------------------------------------------------------------- 77ed264d09SValeria Barra // This QFunction sets up the rhs and true solution for the problem 78cb32e2e7SValeria Barra // ----------------------------------------------------------------------------- 79*2b730f8bSJeremy L Thompson CEED_QFUNCTION(SetupDiffRhs)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 80cb32e2e7SValeria Barra #ifndef M_PI 81cb32e2e7SValeria Barra #define M_PI 3.14159265358979323846 82cb32e2e7SValeria Barra #endif 83e83e87a5Sjeremylt const CeedScalar *x = in[0], *w = in[1]; 84cb32e2e7SValeria Barra CeedScalar *true_soln = out[0], *rhs = out[1]; 85cb32e2e7SValeria Barra 86cb32e2e7SValeria Barra // Quadrature Point Loop 87*2b730f8bSJeremy L Thompson CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 88cb32e2e7SValeria Barra const CeedScalar c[3] = {0, 1., 2.}; 89cb32e2e7SValeria Barra const CeedScalar k[3] = {1., 2., 3.}; 90cb32e2e7SValeria Barra 91*2b730f8bSJeremy L Thompson true_soln[i] = sin(M_PI * (c[0] + k[0] * x[i + Q * 0])) * sin(M_PI * (c[1] + k[1] * x[i + Q * 1])) * sin(M_PI * (c[2] + k[2] * x[i + Q * 2])); 92cb32e2e7SValeria Barra 93*2b730f8bSJeremy L Thompson rhs[i] = w[i + Q * 0] * M_PI * M_PI * (k[0] * k[0] + k[1] * k[1] + k[2] * k[2]) * true_soln[i]; 94cb32e2e7SValeria Barra } // End of Quadrature Point Loop 95cb32e2e7SValeria Barra 96cb32e2e7SValeria Barra return 0; 97cb32e2e7SValeria Barra } 98cb32e2e7SValeria Barra 99e83e87a5Sjeremylt // ----------------------------------------------------------------------------- 100ed264d09SValeria Barra // This QFunction applies the diffusion operator for a scalar field. 101ed264d09SValeria Barra // 102ed264d09SValeria Barra // Inputs: 103ed264d09SValeria Barra // ug - Input vector gradient at quadrature points 1049b072555Sjeremylt // q_data - Geometric factors 105ed264d09SValeria Barra // 106ed264d09SValeria Barra // Output: 107ed264d09SValeria Barra // vg - Output vector (test functions) gradient at quadrature points 108ed264d09SValeria Barra // 109cb32e2e7SValeria Barra // ----------------------------------------------------------------------------- 110*2b730f8bSJeremy L Thompson CEED_QFUNCTION(Diff)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 1119b072555Sjeremylt const CeedScalar *ug = in[0], *q_data = in[1]; 112cb32e2e7SValeria Barra CeedScalar *vg = out[0]; 113cb32e2e7SValeria Barra 114cb32e2e7SValeria Barra // Quadrature Point Loop 115*2b730f8bSJeremy L Thompson CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 116cb32e2e7SValeria Barra // Read spatial derivatives of u 117*2b730f8bSJeremy L Thompson const CeedScalar du[3] = {ug[i + Q * 0], ug[i + Q * 1], ug[i + Q * 2]}; 1189b072555Sjeremylt // Read q_data (dXdxdXdx_T symmetric matrix) 119*2b730f8bSJeremy L Thompson const CeedScalar dXdxdXdx_T[3][3] = { 120*2b730f8bSJeremy L Thompson {q_data[i + 1 * Q], q_data[i + 2 * Q], q_data[i + 3 * Q]}, 121*2b730f8bSJeremy L Thompson {q_data[i + 2 * Q], q_data[i + 4 * Q], q_data[i + 5 * Q]}, 122*2b730f8bSJeremy L Thompson {q_data[i + 3 * Q], q_data[i + 5 * Q], q_data[i + 6 * Q]} 123cb32e2e7SValeria Barra }; 124cb32e2e7SValeria Barra 125*2b730f8bSJeremy L Thompson for (int j = 0; j < 3; j++) { // j = direction of vg 126*2b730f8bSJeremy L Thompson vg[i + j * Q] = (du[0] * dXdxdXdx_T[0][j] + du[1] * dXdxdXdx_T[1][j] + du[2] * dXdxdXdx_T[2][j]); 127*2b730f8bSJeremy L Thompson } 128cb32e2e7SValeria Barra } // End of Quadrature Point Loop 129cb32e2e7SValeria Barra return 0; 130cb32e2e7SValeria Barra } 131cb32e2e7SValeria Barra // ----------------------------------------------------------------------------- 132f6b55d2cSvaleriabarra 133f6b55d2cSvaleriabarra #endif // bp3_h 134