xref: /petsc/.gitlab-ci.yml (revision 35916fb55af248d44baf214f8a1ededac6a8329b)
1#
2# stage-1 take only a few minutes; they do not run the full test suite or external packages.
3#
4# stage-2 runs on MCS systems and may take 10 to 15 minutes. They run the full test suite but with limited mixture of external packages
5#
6# stage-3 runs on MCS systems and may take an hour or more. They run the full test suite and heavily test external packages, utilize valgrind etc
7#
8# The stage-(n) tests are only started if all of the stage-(n-1) tests run without error
9#   You can limit the testing by using the variable STAGE with value 1 or 2
10#
11
12stages:
13  - stage-1
14  - stage-2
15  - stage-3
16  - stage-4
17variables:
18  GIT_STRATEGY: fetch
19  GIT_CLEAN_FLAGS: -ffdxq
20  PETSC_OPTIONS:  -checkfunctionlist
21  TIMEOUT: 450
22
23#
24# The most basic template that most tests will expand upon
25#
26
27.test-basic:
28  interruptible: true
29  only:
30    refs:
31#     Set with CI/CD Shedules - New Schedule
32      - schedules
33      - api
34#     Set with CI/CD Pipelines - Run Pipeline
35      - web
36      - merge_requests
37  dependencies: []
38
39.test:
40  extends: .test-basic
41  except:
42    variables:
43      # Skip if the docs-only label is attached to a merge request
44      - $CI_MERGE_REQUEST_LABELS =~ /(^|,)docs-only($|,)/
45      - $PETSC_CI_SCHEDULED =~ /yes/
46
47check-ci-settings:
48  extends: .test-basic
49  stage: .pre
50  tags:
51    - gce-stage1
52  script:
53    - lib/petsc/bin/maint/check-ci-settings.sh
54#
55#  This provides the basic order of operations and options template for cloud based stage 1 tests.
56#  Not all test-short need to follow this template but most will.
57#
58
59.stage-1:
60  extends: .test
61  stage: stage-1
62  tags:
63    - gce-u22-stage1
64  before_script:
65    - date
66    - hostname
67    - grep PRETTY_NAME /etc/os-release
68    - nproc
69    - lscpu
70    - ccache --zero-stats
71    - printf "CONFIG_OPTS:${CONFIG_OPTS}\n"
72    - printf "PYTHON:${PYTHON}\n"
73    - if [ ! -z ${LOAD_MODULES+x} ]; then module --trace load ${LOAD_MODULES}; module list; fi
74    - if [ ! -z ${INIT_SCRIPT+x} ]; then echo "sourcing ${INIT_SCRIPT}"; source ${INIT_SCRIPT}; fi
75  script:
76    - printf "PATH:$PATH\n"
77    - printf "PYTHONPATH:$PYTHONPATH\n"
78    - printf "PETSC_OPTIONS:$PETSC_OPTIONS\n"
79    - if [ ! -z ${CI_MERGE_REQUEST_SOURCE_BRANCH_NAME+x} ]; then printf "CI_MERGE_REQUEST_SOURCE_BRANCH_NAME:$CI_MERGE_REQUEST_SOURCE_BRANCH_NAME\n" ;fi
80    - ${PYTHON} ./configure --with-debugging=0 COPTFLAGS='-O -march=native' CXXOPTFLAGS='-O -march=native' FOPTFLAGS='-O -march=native' ${CONFIG_OPTS}
81    - make CFLAGS="${MAKE_CFLAGS}" CXXFLAGS="${MAKE_CXXFLAGS}" FFLAGS="${MAKE_FFLAGS}"
82    - if [ ! -z ${ENABLE_CHECK+x} ]; then make CFLAGS="${MAKE_CFLAGS}" CXXFLAGS="${MAKE_CXXFLAGS}" FFLAGS="${MAKE_FFLAGS}" check; fi
83    - make CFLAGS="${MAKE_TEST_CFLAGS}" CXXFLAGS="${MAKE_TEST_CXXFLAGS}" FFLAGS="${MAKE_TEST_FFLAGS}" allgtests-tap gmakesearch="${TEST_SEARCH}" TIMEOUT=${TIMEOUT}
84  variables:
85    PYTHON: python3
86    MAKE_CFLAGS: -Werror
87    MAKE_CXXFLAGS: -Werror -Wzero-as-null-pointer-constant
88    MAKE_FFLAGS: -Werror
89    MAKE_TEST_CFLAGS: -Werror
90    MAKE_TEST_CXXFLAGS: -Werror
91    MAKE_TEST_FFLAGS: -Werror
92  after_script:
93    - date
94    - ccache --show-stats
95  artifacts:
96    reports:
97      junit: arch-*/tests/testresults.xml
98    name: "$CI_JOB_NAME"
99    when: always
100    paths:
101    - arch-*/lib/petsc/conf/*.log
102    - arch-*/lib/pkgconfig/petsc.pc
103    - arch-*/tests/testresults.xml
104    - arch-*/tests/test_*_tap.log
105    - arch-*/tests/test_*_err.log
106    expire_in: 4 days
107
108#
109# The following tests run on the cloud as part of stage-1.
110#
111
112ompi-cuda:
113  extends: .stage-1
114  tags:
115  - cuda-stage1
116  variables:
117    CONFIG_OPTS: --with-mpi-dir=/nfs/gce/software/custom/linux-ubuntu22.04-x86_64/spack/opt/spack/linux-ubuntu22.04-x86_64/gcc-11.3.0/openmpi-4.1.3-qrpnszy --with-cuda=1 --with-fc=0
118    TEST_SEARCH: snes_tutorials-ex19_cuda%
119    ENABLE_CHECK: 1
120    MAKE_CXXFLAGS: -Werror
121
122mpich-cxx-py3:
123  extends: .stage-1
124  variables:
125    CONFIG_OPTS: --with-clanguage=cxx --with-fc=0 CXXFLAGS=-std=c++11
126    TEST_SEARCH: snes_tutorials-ex48%
127    LOAD_MODULES: gcc/12.1.0 mpich/4.1a1-gcc-12.1.0
128
129uni-complex-float-int64:
130  extends: .stage-1
131  variables:
132    CONFIG_OPTS: --with-mpi=0 --with-scalar-type=complex --with-precision=single --with-64-bit-indices
133    TEST_SEARCH: ts_tutorials-ex11_adv_2d_quad_%
134    LOAD_MODULES: gcc/12.1.0 mpich/4.1a1-gcc-12.1.0
135
136c99-mlib-static-py:
137  extends: .stage-1
138  variables:
139    CONFIG_OPTS: --with-single-library=0 --with-shared-libraries=0 CFLAGS=-std=c99 FFLAGS= CXXFLAGS=
140    ENABLE_CHECK: 1
141    TEST_SEARCH: snes_tutorials-ex19% snes_tutorials-ex5f90t%
142    MAKE_TEST_FFLAGS: -Werror -std=f2008
143    LOAD_MODULES: gcc/12.1.0 mpich/4.1a1-gcc-12.1.0
144
145petsc4py-install:
146  extends: .stage-2
147  tags:
148    - gce-stage2
149  variables:
150    PYTHON: python3
151    T_PREFIX: petsc-install
152    T_DESTDIR: petsc-destdir
153    T_PETSC4PY: src/binding/petsc4py
154    T_VALIDATE_CMD: lib/petsc/bin/maint/validate-petsc4py.sh
155  script:
156    - printf "PATH:$PATH\n"
157    - mkdir hide
158    - if [ ! -z ${CI_MERGE_REQUEST_SOURCE_BRANCH_NAME+x} ]; then printf "CI_MERGE_REQUEST_SOURCE_BRANCH_NAME:$CI_MERGE_REQUEST_SOURCE_BRANCH_NAME\n" ;fi
159    - ${PYTHON} ./configure --prefix="${PWD}/${T_PREFIX}" --with-petsc4py=1 --with-debugging=0
160    - make CFLAGS=-Werror CXXFLAGS="-Werror -Wzero-as-null-pointer-constant" FFLAGS=-Werror
161    - printf "====== Test A. Install into staging directory then into prefix directory (mimics distro package recipe) =====\n"
162    - make install DESTDIR="${PWD}/${T_DESTDIR}"
163    - test "$(find ${PWD}/${T_PREFIX} -mindepth 1 | wc -l)" -eq 0
164    - test "$(find ${PWD}/${T_DESTDIR} -mindepth 1 | wc -l)" -gt 0
165    - (cd "${PWD}/${T_DESTDIR}" && find * -exec install -v -D "{}" "/{}" \; )
166    - mv arch-* hide/ && PETSC_DIR="${PWD}/${T_PREFIX}" ${T_VALIDATE_CMD} && mv hide/arch-* ./
167    - rm -r "${PWD}/${T_PREFIX}" "${PWD}/${T_DESTDIR}" && mkdir "${PWD}/${T_PREFIX}"
168    - printf "====== Test B. Install directly into prefix directory =====\n"
169    - make install
170    - test "$(find ${PWD}/${T_PREFIX} -mindepth 1 | wc -l)" -gt 0
171    - mv arch-* hide/ && PETSC_DIR="${PWD}/${T_PREFIX}" ${T_VALIDATE_CMD} && mv hide/arch-* ./
172    - rm -r "${PWD}/${T_PREFIX}"/*/petsc4py*
173    - printf "====== Test C. Install manually with setuptools =====\n"
174    - export PETSC_DIR="${PWD}/${T_PREFIX}" && (cd "${T_PETSC4PY}" && ${PYTHON} setup.py build)
175    - export PETSC_DIR="${PWD}/${T_PREFIX}" P="${PWD}" && (cd "${T_PETSC4PY}" && ${PYTHON} setup.py install --install-lib="${P}/${T_PREFIX}/lib")
176    - mv arch-* hide/ && PETSC_DIR="${PWD}/${T_PREFIX}" ${T_VALIDATE_CMD} && mv hide/arch-* ./
177    - rm -r "${PWD}/${T_PREFIX}"/*/petsc4py*
178    - printf "====== Test D. Install manually with setuptools with staging =====\n"
179    - export PETSC_DIR="${PWD}/${T_PREFIX}" P="${PWD}" && (cd "${T_PETSC4PY}" && ${PYTHON} setup.py install --root="${P}/${T_DESTDIR}" --install-lib="${P}/${T_PREFIX}/lib")
180    - (cd "${PWD}/${T_DESTDIR}" && find * -exec install -v -D "{}" "/{}" \; )
181    - mv arch-* hide/ && PETSC_DIR="${PWD}/${T_PREFIX}" ${T_VALIDATE_CMD} && mv hide/arch-* ./
182
183petsc4py-pip:
184  extends: .stage-2
185  tags:
186    - gce-stage2
187  variables:
188    PETSC_CONFIGURE_OPTIONS: --with-mpi=0 --with-fc=0
189    CFLAGS: -O0
190  script:
191    - python3 -m venv pip-builds
192    - source pip-builds/bin/activate
193    - python3 -m pip install --upgrade pip
194    - python3 -m pip install .
195    - python3 -m pip install src/binding/petsc4py
196    - python3 -m petsc4py
197
198checksource:
199  extends: .test-basic
200  stage: .pre
201  tags:
202    - gce-u22-stage1
203  script:
204    - python3 ./configure --with-mpi=0 --with-fc=0 --with-cxx=0
205    - vermin --version
206    - make vermin
207    - PATH=/nfs/gce/projects/petsc/soft/u22.04/spack/opt/spack/linux-ubuntu22.04-ivybridge/gcc-11.2.0/llvm-15.0.0-m7mrrtynenjytkmiib2moeqk6kfcifmv/bin:$PATH make checkclangformat SHELL=bash
208    - make checkbadSource SHELL=bash
209    - make checkbadFileChange SHELL=bash
210    - make -f gmakefile check_output SHELL=bash
211    - make check_petsc4py_rst
212  artifacts:
213    name: "$CI_JOB_NAME"
214    when: always
215    paths:
216    - arch-*/lib/petsc/conf/*.patch
217    - arch-*/lib/petsc/conf/*.log
218    expire_in: 4 days
219
220pause-for-approval:
221  extends: .test
222  stage: .pre
223  tags:
224    - gce-stage1
225  only:
226    refs:
227      - merge_requests
228    variables:
229      - $CI_MERGE_REQUEST_EVENT_TYPE == "merged_result"
230      - $CI_MERGE_REQUEST_EVENT_TYPE == "detached"
231  script:
232    - echo "pause-for-approval has no script to run"
233  variables:
234    GIT_STRATEGY: none
235  when: manual
236  allow_failure: false
237
238#
239# This provides the basic order of operations and options template for stage-2,3 tests.
240# Not all stage-2,3 need to follow this template, but most will.
241#
242.stage-23:
243  extends: .test
244  script:
245    - if [ ! -z ${RUN_GCOV+x} ]; then gcovr --version; fi
246    - if [ -d ${HOME}/petsc-hash-pkgs/ ]; then find ${HOME}/petsc-hash-pkgs/ -maxdepth 1 -mindepth 1 -type d -mtime +25 -exec rm -rf {} \; ; fi
247    - printf "PATH:$PATH\n"
248    - printf "PYTHONPATH:$PYTHONPATH\n"
249    - printf "PETSC_OPTIONS:$PETSC_OPTIONS\n"
250    - if [ ! -z ${CI_MERGE_REQUEST_SOURCE_BRANCH_NAME+x} ]; then printf "CI_MERGE_REQUEST_SOURCE_BRANCH_NAME:$CI_MERGE_REQUEST_SOURCE_BRANCH_NAME\n" ;fi
251    - printf "./config/examples/${TEST_ARCH}.py\n"
252    - cat ./config/examples/${TEST_ARCH}.py
253    - ./config/examples/${TEST_ARCH}.py
254    - make CFLAGS="${MAKE_CFLAGS}" CXXFLAGS="${MAKE_CXXFLAGS}" FFLAGS="${MAKE_FFLAGS}"
255    - make CFLAGS="${MAKE_CFLAGS}" CXXFLAGS="${MAKE_CXXFLAGS}" FFLAGS="${MAKE_FFLAGS}" check
256    - make updatedatafiles
257    - if [ -z ${DISABLE_PETSC4PY_TESTS+x} ]; then if [ -z ${ENABLE_PETSC4PY_LDPRELOAD+x} ]; then echo "NOT using LD_PRELOAD"; make petsc4pytest; else echo "using LD_PRELOAD"; LD_PRELOAD=${PWD}/${TEST_ARCH}/lib/libpetsc.so make petsc4pytest; fi; fi
258    - if [ -z ${DISABLE_TESTS+x} ]; then make CFLAGS="${MAKE_CFLAGS}" CXXFLAGS="${MAKE_CXXFLAGS}" FFLAGS="${MAKE_FFLAGS}" cleantest allgtests-tap TIMEOUT=${TIMEOUT}  ${TEST_OPTS}; fi
259    - if [ ! -z ${RUN_GCOV+x} ]; then make gcov; fi
260  artifacts:
261    reports:
262      junit: ${TEST_ARCH}/tests/testresults.xml
263    name: "$CI_JOB_NAME"
264    when: always
265    paths:
266    - ${TEST_ARCH}/lib/petsc/conf/*.log
267    - ${TEST_ARCH}/lib/pkgconfig/petsc.pc
268    - ${TEST_ARCH}/tests/testresults.xml
269    - ${TEST_ARCH}/tests/test_${TEST_ARCH}_tap.log
270    - ${TEST_ARCH}/tests/test_${TEST_ARCH}_err.log
271    - ${TEST_ARCH}/${TEST_ARCH}-gcovr-report.json.tar.gz
272    expire_in: 4 days
273  variables:
274    OPENBLAS_NUM_THREADS: 1
275
276.stage-2:
277  extends: .stage-23
278  stage: stage-2
279
280.stage-3:
281  extends: .stage-23
282  stage: stage-3
283
284#
285# The following provide templates for various OSes for pre/post info
286#
287
288.linux_test_noflags:
289  before_script:
290    - date
291    - hostname
292    - grep PRETTY_NAME /etc/os-release
293    - nproc
294    - lscpu
295    - ccache --zero-stats
296    - if [ ! -z ${LOAD_MODULES+x} ]; then module --trace load ${LOAD_MODULES}; module list; fi
297    - if [ ! -z ${INIT_SCRIPT+x} ]; then echo "sourcing ${INIT_SCRIPT}"; source ${INIT_SCRIPT}; fi
298  after_script:
299    - date
300    - ccache --show-stats
301
302.linux_test_nofflags:
303  extends: .linux_test_noflags
304  variables:
305    MAKE_CFLAGS: -Werror
306    MAKE_CXXFLAGS: -Werror
307
308.linux_test:
309  extends: .linux_test_noflags
310  variables:
311    MAKE_CFLAGS: -Werror
312    MAKE_CXXFLAGS: -Werror
313    MAKE_FFLAGS: -Werror
314
315.freebsd_test:
316  variables:
317    MAKE_CFLAGS: -Werror
318    MAKE_CXXFLAGS: -Werror
319    MAKE_FFLAGS: -Werror
320  before_script:
321    - date
322    - hostname
323    - freebsd-version
324    - echo $(sysctl -n hw.ncpu)
325    - ccache --zero-stats
326  after_script:
327    - date
328    - ccache --show-stats
329
330.osx_test:
331  variables:
332    MAKE_CFLAGS: -Werror
333    MAKE_CXXFLAGS: -Werror
334    MAKE_FFLAGS: -Werror
335  before_script:
336    - date
337    - hostname
338    - sw_vers -productVersion
339    - echo $(sysctl -n hw.ncpu)
340    - ccache --zero-stats
341    - if [ ! -z ${INIT_SCRIPT+x} ]; then echo "sourcing ${INIT_SCRIPT}"; source ${INIT_SCRIPT}; fi
342  after_script:
343    - date
344    - ccache --show-stats
345
346.opensolaris_test:
347  before_script:
348    - date
349    - hostname
350    - uname -a
351    - nproc
352    - isainfo -x
353  after_script:
354    - date
355
356.mswin_test:
357  before_script:
358    - date
359    - hostname
360    - uname -a
361    - nproc
362  after_script:
363    - date
364
365#
366# The following tests run as part of stage-2.
367#
368# The tags variable used in the tests below connects the particular test with the runners
369# listed on the left hand side of https://gitlab.com/petsc/petsc/-/settings/ci_cd.
370# For example the test linux-sycl-double any runner that has the tags 'gce-nfs, linux-fast'
371# (in a blue box beneath it)
372#
373
374osx-m1:
375  extends:
376    - .stage-3
377    - .osx_test
378  tags:
379    - os:macos-m1
380  variables:
381    TEST_ARCH: arch-ci-osx-m1
382    PETSC_OPTIONS: -check_pointer_intensity 0 -error_output_stdout -nox -nox_warning -malloc_dump
383    INIT_SCRIPT: /Volumes/Scratch/svcpetsc/soft/py3venv/cython3setup.sh
384
385freebsd-cxx-cmplx-64idx-dbg:
386  extends:
387    - .stage-2
388    - .freebsd_test
389  tags:
390    - os:fbsd
391  variables:
392    TEST_ARCH: arch-ci-freebsd-cxx-cmplx-64idx-dbg
393
394freebsd-c-single-opt:
395  extends:
396    - .stage-2
397    - .freebsd_test
398  tags:
399    - os:fbsd
400  variables:
401    TEST_ARCH: arch-ci-freebsd-c-single-opt
402
403mswin-opt-impi:
404  extends:
405    - .stage-3
406    - .mswin_test
407  tags:
408    - mswin-stage3
409  variables:
410    TEST_ARCH: arch-ci-mswin-opt-impi
411    TEST_OPTS: search='ksp_ksp_tests*'
412
413linux-gcc-quad-64idx-dbg:
414  extends:
415    - .stage-2
416    - .linux_test
417  tags:
418    - gce-stage2
419  variables:
420    TEST_ARCH: arch-ci-linux-gcc-quad-64idx-dbg
421
422linux-gcc-pkgs-opt:
423  extends:
424    - .stage-2
425    - .linux_test
426  tags:
427    - gce-stage2
428  variables:
429    TEST_ARCH: arch-ci-linux-gcc-pkgs-opt
430
431linux-gcc-complex-opt-32bit:
432  extends:
433    - .stage-2
434    - .linux_test
435  tags:
436    - gce-stage2
437  variables:
438    TEST_ARCH: arch-ci-linux-gcc-complex-opt-32bit
439
440#
441# The following tests run as part of stage-3.
442#
443
444freebsd-cxx-cmplx-pkgs-dbg:
445  extends:
446    - .stage-3
447    - .freebsd_test
448  tags:
449    - os:fbsd
450  variables:
451    TEST_ARCH: arch-ci-freebsd-cxx-cmplx-pkgs-dbg
452
453freebsd-cxx-pkgs-opt:
454  extends:
455    - .stage-3
456    - .freebsd_test
457  tags:
458    - os:fbsd
459  variables:
460    PETSC_OPTIONS: -vecscatter_mpi1 false -options_left false -checkfunctionlist
461    TEST_ARCH: arch-ci-freebsd-cxx-pkgs-opt
462
463freebsd-pkgs-opt:
464  extends:
465    - .stage-3
466    - .freebsd_test
467  tags:
468    - os:fbsd
469  variables:
470    TEST_ARCH: arch-ci-freebsd-pkgs-opt
471
472linux-hip-double:
473  extends:
474    - .stage-3
475    - .linux_test_noflags
476  tags:
477    - gpu:amd, os:linux
478  variables:
479    TEST_ARCH: arch-ci-linux-hip-double
480
481linux-sycl-double:
482  extends:
483    - .stage-3
484    - .linux_test_noflags
485  tags:
486    - gce-nfs, linux-fast
487  variables:
488    TEST_ARCH: arch-ci-linux-sycl-double
489    LOAD_MODULES: compiler/latest mpi/latest cmake/3.20.5-yjp2hz6
490    TEST_OPTS: query=requires queryval=kokkos_kernels
491
492linux-cuda-pkgs:
493  extends:
494    - .stage-3
495    - .linux_test
496  tags:
497    - cuda-stage3
498  variables:
499    TEST_ARCH: arch-ci-linux-cuda-pkgs
500    TEST_OPTS: -j3 query=requires queryval=cuda
501
502linux-cuda112-omp:
503  extends:
504    - .stage-3
505    - .linux_test
506  tags:
507    - cuda-stage3
508  variables:
509    TEST_ARCH: arch-ci-linux-cuda112-omp
510    TEST_OPTS: -j4 query=requires queryval=kokkos_kernels
511    LOAD_MODULES: cuda/11.2.2 u-gcc-9/9.4.0
512    OMP_PROC_BIND: "false"
513    OMP_NUM_THREADS: 1
514
515linux-cuda-cmplx:
516  extends:
517    - .stage-3
518    - .linux_test
519  tags:
520    - cuda-stage3
521  variables:
522    TEST_ARCH: arch-ci-linux-cuda-cmplx
523
524linux-cuda-double-64idx:
525  extends:
526    - .stage-3
527    - .linux_test
528  tags:
529    - cuda-stage3
530  variables:
531    TEST_ARCH: arch-ci-linux-cuda-double-64idx
532    TEST_OPTS: -j15 query=requires queryval=cuda
533
534linux-cuda-single-cxx:
535  extends:
536    - .stage-3
537    - .linux_test_noflags
538  tags:
539    - cuda-stage3
540  variables:
541    TEST_ARCH: arch-ci-linux-cuda-single-cxx
542    LOAD_MODULES: nvhpc/22.3
543    TEST_OPTS: -j15 query=requires queryval=cuda
544
545linux-cuda-uni-pkgs:
546  extends:
547    - .stage-3
548    - .linux_test
549  tags:
550    - cuda-stage3
551  variables:
552    TEST_ARCH: arch-ci-linux-cuda-uni-pkgs
553    TEST_OPTS: -j20 query=requires queryval=cuda
554
555linux-viennacl:
556  extends:
557    - .stage-3
558    - .linux_test
559  tags:
560    - cuda-stage3
561  variables:
562    TEST_ARCH: arch-ci-linux-viennacl
563    MAKE_CXXFLAGS: -Werror -Wno-ignored-attributes
564    TEST_OPTS: -j20 query=requires queryval=viennacl
565
566linux-without-fc:
567  extends:
568    - .stage-3
569    - .linux_test
570  tags:
571    - gce-nfs
572  variables:
573    TEST_ARCH: arch-ci-linux-without-fc
574
575linux-cmplx-single:
576  extends:
577    - .stage-3
578    - .linux_test
579  tags:
580    - name:si
581  variables:
582    FLEXIBLAS: netlib
583    TEST_ARCH: arch-ci-linux-cmplx-single
584
585linux-gcc-cxx-avx2:
586  extends:
587    - .stage-3
588    - .linux_test
589  tags:
590    - name:petsc-knl-01
591  variables:
592    TEST_ARCH: arch-ci-linux-gcc-cxx-avx2
593
594linux-clang-avx:
595  extends:
596    - .stage-3
597    - .linux_test
598  tags:
599    - name:petsc-knl-01
600  variables:
601    TEST_ARCH: arch-ci-linux-clang-avx
602
603linux-knl:
604  extends:
605    - .stage-3
606    - .linux_test
607  tags:
608    - name:petsc-knl-01
609  variables:
610    MAKE_FFLAGS: -warn errors
611    TEST_ARCH: arch-ci-linux-knl
612    LOAD_MODULES: intel-oneapi-compilers/2022.0.2 intel-oneapi-mkl/2022.0.2 intel-oneapi-mpi/2021.5.1
613
614linux-intel-mkl-single:
615  extends:
616    - .stage-3
617    - .linux_test_nofflags
618  tags:
619    - name:petsc-knl-01
620  variables:
621    TEST_ARCH: arch-ci-linux-intel-mkl-single
622    LOAD_MODULES: intel-oneapi-compilers/2022.0.2 intel-oneapi-mkl/2022.0.2 intel-oneapi-mpi/2021.5.1
623
624linux-cxx-cmplx-pkgs-64idx:
625  extends:
626    - .stage-3
627    - .linux_test
628  tags:
629    - gce-nfs
630  variables:
631    TEST_ARCH: arch-ci-linux-cxx-cmplx-pkgs-64idx
632    LOAD_MODULES: llvm/9.0.0-7fyffox gcc/8.3.0-fjpc5ys cmake/3.14.2-rl3q676
633
634# Set env vars for 'Kokkos + OpenMP' tests, so that they won't give warnings
635linux-pkgs-dbg-ftn-interfaces:
636  extends:
637    - .stage-3
638    - .linux_test
639  tags:
640    - gce-nfs
641  variables:
642    TEST_ARCH: arch-ci-linux-pkgs-dbg-ftn-interfaces
643    LOAD_MODULES: cmake/3.20.5-yjp2hz6
644    OMP_PROC_BIND: "false"
645    OMP_NUM_THREADS: 4
646
647linux-pkgs-cxx-mlib:
648  extends:
649    - .stage-3
650    - .linux_test
651  tags:
652    - gce-u22-stage3
653  variables:
654    TEST_ARCH: arch-ci-linux-pkgs-cxx-mlib
655
656linux-pkgs-valgrind:
657  extends:
658    - .stage-3
659    - .linux_test
660  tags:
661    - gce-valgrind
662  variables:
663    TEST_ARCH: arch-ci-linux-pkgs-valgrind
664    TIMEOUT: 7200
665
666linux-pkgs-opt:
667  extends:
668    - .stage-3
669    - .linux_test
670  tags:
671    - gce-nfs, linux-fast
672  variables:
673    TEST_ARCH: arch-ci-linux-pkgs-opt
674    LOAD_MODULES: gcc/10.1.0-5hiqhdh
675
676linux-pkgs-gcov:
677  extends:
678    - .stage-3
679    - .linux_test
680  tags:
681    - gce-nfs, linux-gcov
682  variables:
683    TEST_ARCH: arch-ci-linux-pkgs-gcov
684    LOAD_MODULES: python-3.9.13-gcc-7.5.0-fq67pdh py-gcovr-5.2-gcc-7.5.0-o7fu4xq
685    RUN_GCOV: 1
686linux-cmplx-gcov:
687  extends:
688    - .stage-3
689    - .linux_test
690  tags:
691    - gce-nfs, linux-gcov
692  variables:
693    PETSC_OPTIONS:  -vecscatter_mpi1 false -options_left false -checkfunctionlist
694    TEST_ARCH: arch-ci-linux-cmplx-gcov
695    LOAD_MODULES: gcc/8.3.0-fjpc5ys python-3.9.13-gcc-7.5.0-fq67pdh py-gcovr-5.2-gcc-7.5.0-o7fu4xq
696    RUN_GCOV: 1
697
698linux-matlab-ilp64-gcov:
699  extends:
700    - .stage-3
701    - .linux_test
702  tags:
703    - gce-nfs, linux-gcov
704  variables:
705    TEST_ARCH: arch-ci-linux-matlab-ilp64-gcov
706    LOAD_MODULES: matlab/R2018a python-3.9.13-gcc-7.5.0-fq67pdh py-gcovr-5.2-gcc-7.5.0-o7fu4xq
707    RUN_GCOV: 1
708  allow_failure: true
709
710linux-gcov:
711  extends:
712    - .stage-3
713    - .linux_test
714  tags:
715    - gce-nfs, linux-gcov
716  variables:
717    TEST_ARCH: arch-ci-linux-gcov
718    LOAD_MODULES: python-3.9.13-gcc-7.5.0-fq67pdh py-gcovr-5.2-gcc-7.5.0-o7fu4xq
719    RUN_GCOV: 1
720
721linux-pgi:
722  extends:
723    - .stage-3
724    - .linux_test_noflags
725  tags:
726    - gce-nfs, linux-mcpu
727  variables:
728    TEST_ARCH: arch-ci-linux-pgi
729    LOAD_MODULES: hpc_sdk/20.9
730
731# If the Nag license server fails then ${PETSC_DIR}/naglicenseproblem is created and the job is marked as failed but allow_failure
732linux-nagfor:
733  extends:
734    - .stage-3
735    - .linux_test_nofflags
736  tags:
737    - gce-nfs, linux-mcpu
738  script:
739    - rm -f naglicenseproblem
740    - printf "PATH:$PATH\n"
741    - printf "PETSC_OPTIONS:$PETSC_OPTIONS\n"
742    - if [ ! -z ${CI_MERGE_REQUEST_SOURCE_BRANCH_NAME+x} ]; then printf "CI_MERGE_REQUEST_SOURCE_BRANCH_NAME:$CI_MERGE_REQUEST_SOURCE_BRANCH_NAME\n" ;fi
743    - printf "./config/examples/${TEST_ARCH}.py\n"
744    - cat ./config/examples/${TEST_ARCH}.py
745    - ./config/examples/${TEST_ARCH}.py || if [ -f naglicenseproblem ]; then exit 126; else exit 1; fi
746    - make CFLAGS="${MAKE_CFLAGS}" CXXFLAGS="${MAKE_CXXFLAGS}" FFLAGS="${MAKE_FFLAGS}" || if [ -f naglicenseproblem ]; then exit 126; else exit 1; fi
747    - make CFLAGS="${MAKE_CFLAGS}" CXXFLAGS="${MAKE_CXXFLAGS}" FFLAGS="${MAKE_FFLAGS}" check || if [ -f naglicenseproblem ]; then exit 126; else exit 1; fi
748    - make updatedatafiles
749    - make CFLAGS="${MAKE_CFLAGS}" CXXFLAGS="${MAKE_CXXFLAGS}" FFLAGS="${MAKE_FFLAGS}" cleantest allgtests-tap TIMEOUT=${TIMEOUT}  ${TEST_OPTS} || if [ -f naglicenseproblem ]; then exit 126; else exit 1; fi
750  variables:
751    LOAD_MODULES: nag/6.1
752    TEST_ARCH: arch-ci-linux-nagfor
753  allow_failure:
754    exit_codes: 126
755
756linux-intel-cmplx:
757  extends:
758    - .stage-3
759    - .linux_test_nofflags
760  tags:
761    - gce-nfs
762  variables:
763    TEST_ARCH: arch-ci-linux-intel-cmplx
764    LOAD_MODULES: intel-mkl/19.5 intel/19.0-nompilib cmake/3.20.5-yjp2hz6
765    ENABLE_PETSC4PY_LDPRELOAD: 1
766
767linux-xsdk-dbg:
768  extends:
769    - .stage-3
770    - .linux_test
771  tags:
772    - gce-nfs
773  variables:
774    TEST_ARCH: arch-ci-linux-xsdk-dbg
775    LOAD_MODULES: gcc/8.3.0-fjpc5ys
776
777linux-analyzer:
778  extends:
779    - .stage-2
780    - .linux_test
781  tags:
782    - gce-u22-stage2
783  script:
784    - printf "PATH:$PATH\n"
785    - printf "PYTHONPATH:$PYTHONPATH\n"
786    - printf "PETSC_OPTIONS:$PETSC_OPTIONS\n"
787    - if [ ! -z ${CI_MERGE_REQUEST_SOURCE_BRANCH_NAME+x} ]; then printf "CI_MERGE_REQUEST_SOURCE_BRANCH_NAME:$CI_MERGE_REQUEST_SOURCE_BRANCH_NAME\n" ;fi
788    - printf "./config/examples/${TEST_ARCH}.py\n"
789    - cat ./config/examples/${TEST_ARCH}.py
790    - ./config/examples/${TEST_ARCH}.py
791    - make LINTER_OPTIONS="${LINTER_OPTIONS}" test-lint
792    - make LINTER_OPTIONS="${LINTER_OPTIONS}" lint
793  variables:
794    TEST_ARCH: arch-ci-linux-analyzer
795    LINTER_OPTIONS: "--PETSC_ARCH=${TEST_ARCH} --clang_lib=`llvm-config-14 --libdir`/libclang.so.1 --verbose --werror"
796  artifacts:
797    paths:
798    - ${TEST_ARCH}/lib/petsc/conf/*.log
799    - ./petscLintPatches/*.patch
800    expire_in: 4 days
801
802linux-intel:
803  extends:
804    - .stage-3
805    - .linux_test_nofflags
806  tags:
807    - gce-nfs
808  variables:
809    TEST_ARCH: arch-ci-linux-intel
810    LOAD_MODULES: intel-mkl/19.5 intel/19.0-nompilib
811
812linux-opt-misc:
813  extends:
814    - .stage-3
815    - .linux_test
816  tags:
817    - gce-nfs, linux-fast
818  variables:
819    TEST_ARCH: arch-ci-linux-opt-misc
820    LOAD_MODULES: gcc/6.5.0-57usejd
821
822linux-pkgs-64idx:
823  extends:
824    - .stage-3
825    - .linux_test
826  tags:
827    - gce-nfs, linux-mcpu
828  variables:
829    TEST_ARCH: arch-ci-linux-pkgs-64idx
830    LOAD_MODULES: cmake/3.20.5-yjp2hz6 intel-mkl/19.5
831
832linux-64idx-i8:
833  extends:
834    - .stage-3
835    - .linux_test
836  tags:
837    - gce-nfs
838  variables:
839    TEST_ARCH: arch-ci-linux-64idx-i8
840
841linux-gcc-ifc-cmplx:
842  extends:
843    - .stage-3
844    - .linux_test_nofflags
845  tags:
846    - gce-nfs
847  variables:
848    TEST_ARCH: arch-ci-linux-gcc-ifc-cmplx
849    LOAD_MODULES: intel/19.0-nompilib cmake/3.20.0-vov726r
850
851linux-opt-cxx-quad:
852  extends:
853    - .stage-3
854    - .linux_test
855  tags:
856    - gce-nfs
857  variables:
858    TEST_ARCH: arch-ci-linux-opt-cxx-quad
859
860linux-ILP64:
861  extends:
862    - .stage-3
863    - .linux_test
864  tags:
865    - gce-nfs
866  variables:
867    TEST_ARCH: arch-ci-linux-ILP64
868    LOAD_MODULES: mpich/2-1.5-gcc750
869
870linux-64idx-i8-uni:
871  extends:
872    - .stage-3
873    - .linux_test
874  tags:
875    - gce-nfs
876  variables:
877    TEST_ARCH: arch-ci-linux-64idx-i8-uni
878
879mswin-intel-cxx-cmplx:
880  extends:
881    - .stage-3
882    - .mswin_test
883  tags:
884    - mswin-stage3
885  variables:
886    TEST_ARCH: arch-ci-mswin-intel-cxx-cmplx
887
888mswin-uni:
889  extends:
890    - .stage-3
891    - .mswin_test
892  tags:
893    - mswin-stage3
894  variables:
895    PETSC_OPTIONS: -check_pointer_intensity 0 -error_output_stdout -nox -nox_warning -malloc_dump
896    TEST_ARCH: arch-ci-mswin-uni
897
898mswin-gnu:
899  extends:
900    - .stage-3
901    - .mswin_test
902  tags:
903    - mswin-stage3
904  variables:
905    TEST_ARCH: arch-ci-mswin-gnu
906    MAKE_CFLAGS: -Werror
907    MAKE_CXXFLAGS: -Werror
908    MAKE_FFLAGS: -Werror
909    DISABLE_TESTS: 1
910  artifacts:
911    reports:
912    paths:
913    - arch-*/lib/petsc/conf/*.log
914    expire_in: 4 days
915
916#mswin-intel:
917#  extends:
918#    - .stage-3
919#    - .mswin_test
920#  tags:
921#    - os:win
922#  variables:
923#    TEST_ARCH: arch-ci-mswin-intel
924
925opensolaris-pkgs-opt:
926  extends:
927    - .stage-3
928    - .opensolaris_test
929  tags:
930    - name:n-gage
931  variables:
932    TEST_ARCH: arch-ci-opensolaris-pkgs-opt
933
934opensolaris-cmplx-pkgs-dbg:
935  extends:
936    - .stage-3
937    - .opensolaris_test
938  tags:
939    - name:n-gage
940  variables:
941    TEST_ARCH: arch-ci-opensolaris-cmplx-pkgs-dbg
942
943opensolaris-misc:
944  extends:
945    - .stage-3
946    - .opensolaris_test
947  tags:
948    - name:n-gage
949  variables:
950    TEST_ARCH: arch-ci-opensolaris-misc
951
952osx-cxx-cmplx-pkgs-dbg:
953  extends:
954    - .stage-3
955    - .osx_test
956  tags:
957    - os:macos
958  variables:
959    TEST_ARCH: arch-ci-osx-cxx-cmplx-pkgs-dbg
960    INIT_SCRIPT: /Users/glci/bin/py3.sh
961
962osx-cxx-pkgs-opt:
963  extends:
964    - .stage-3
965    - .osx_test
966  tags:
967    - os:macos, opt
968  variables:
969    PETSC_OPTIONS: -vecscatter_mpi1 false -options_left false -checkfunctionlist
970    TEST_ARCH: arch-ci-osx-cxx-pkgs-opt
971    MAKE_CXXFLAGS: -Werror -Wno-pass-failed
972
973osx-dbg:
974  extends:
975    - .stage-3
976    - .osx_test
977  tags:
978    - os:macos
979  variables:
980    TEST_ARCH: arch-ci-osx-dbg
981
982osx-xsdk-opt:
983  extends:
984    - .stage-3
985    - .osx_test
986  tags:
987    - os:macos, opt
988  variables:
989    TEST_ARCH: arch-ci-osx-xsdk-opt
990
991# job for analyzing the coverage results and generating the various reports
992analyze-coverage:
993  extends: .test
994  stage: stage-4
995  tags:
996    - gce-nfs-short
997  dependencies:
998    - linux-pkgs-gcov
999    - linux-cmplx-gcov
1000    - linux-matlab-ilp64-gcov
1001    - linux-gcov
1002  variables:
1003    PYTHON: python3
1004    PETSC_ARCH: arch-ci-analyze-pipeline
1005    LOAD_MODULES: python-3.9.13-gcc-7.5.0-fq67pdh py-gcovr-5.2-gcc-7.5.0-o7fu4xq
1006  before_script:
1007    - date
1008    - hostname
1009    - if [ ! -z ${LOAD_MODULES+x} ]; then module --trace load ${LOAD_MODULES}; module list; fi
1010    - ${PYTHON} --version
1011    - gcovr --version
1012  script:
1013    - printf "PATH:$PATH\n"
1014    - printf "PYTHONPATH:$PYTHONPATH\n"
1015    - if [ ! -z ${CI_MERGE_REQUEST_SOURCE_BRANCH_NAME+x} ]; then printf "CI_MERGE_REQUEST_SOURCE_BRANCH_NAME:$CI_MERGE_REQUEST_SOURCE_BRANCH_NAME\n" ;fi
1016    - ${PYTHON} ./configure --with-mpi=0 --with-cxx=0 --download-sowing --with-fortran-bindings
1017    - make mergegcov PETSC_GCOV_OPTIONS='--ci-mode --verbose'
1018  coverage: /^\s*lines:\s*\d+.\d+\%/
1019  artifacts:
1020    name: "$CI_JOB_NAME"
1021    when: always
1022    paths:
1023    - arch-ci-analyze-pipeline/gcovr/*
1024    - arch-ci-analyze-pipeline/lib/petsc/conf/*.log
1025    expire_in: 4 days
1026    reports:
1027      coverage_report:
1028        coverage_format: cobertura
1029        path: arch-ci-analyze-pipeline/gcovr/xml/*.xml
1030
1031# template for the coverage review jobs, these must be separate jobs as you cannot deploy multiple
1032# environments from one job...
1033.coverage-review:
1034  extends: .test
1035  stage: .post
1036  tags:
1037    - gce-nfs-short
1038  dependencies:
1039    - analyze-coverage
1040  script:
1041    - date
1042    - hostname
1043  artifacts:
1044    name: "$CI_JOB_NAME"
1045    when: always
1046    paths:
1047    - arch-ci-analyze-pipeline/gcovr/*
1048    - arch-ci-analyze-pipeline/lib/petsc/conf/*.log
1049    expire_in: 4 days
1050
1051coverage-total-review:
1052  extends: .coverage-review
1053  environment:
1054    name: coverage/all/$CI_COMMIT_REF_SLUG
1055    url: https://$CI_PROJECT_NAMESPACE.gitlab.io/-/$CI_PROJECT_NAME/-/jobs/$CI_JOB_ID/artifacts/arch-ci-analyze-pipeline/gcovr/html/report.html
1056    auto_stop_in: one week
1057    deployment_tier: testing
1058
1059coverage-untested-review:
1060  extends: .coverage-review
1061  environment:
1062    name: coverage/untested/$CI_COMMIT_REF_SLUG
1063    url: https://$CI_PROJECT_NAMESPACE.gitlab.io/-/$CI_PROJECT_NAME/-/jobs/$CI_JOB_ID/artifacts/arch-ci-analyze-pipeline/gcovr/html_untested/report_untested.html
1064    auto_stop_in: one week
1065    deployment_tier: testing
1066
1067analyze-pipeline:
1068  extends: .coverage-review
1069  script:
1070    - date
1071    - hostname
1072    # This file is created by lib/petsc/bin/maint/gcov.py. If it exists then the CI
1073    # pipeline should fail
1074    - if [ -f ./arch-ci-analyze-pipeline/gcovr/.CI_FAIL ]; then
1075        cat ./arch-ci-analyze-pipeline/gcovr/merge_gcov_errors.log;
1076        exit 1;
1077      fi
1078
1079#
1080# Base job for a documentation build
1081#
1082.docs:
1083  stage: stage-3
1084  tags:
1085    - gce-stage2
1086  before_script:
1087    - VENV=venv-petsc-docs &&
1088      python3 -m venv $VENV &&
1089      . $VENV/bin/activate &&
1090      cd doc &&
1091      pip install -r requirements.txt
1092
1093#
1094# Build documentation and make available for review using GitLab pages
1095#
1096docs-review:
1097  extends:
1098    - .docs
1099    - .test-basic
1100  script:
1101    - (make html BUILDDIR="../public" SPHINXOPTS="-T -E -W --keep-going -j 1") || (printf "Sphinx build failed (warnings count as errors)\n" && false)
1102    - (make latexpdf SPHINXOPTS="-T -E -W --keep-going") || (printf "Sphinx build failed (warnings count as errors)\n" && false)
1103    - cp _build/latex/manual.pdf ../public/html/docs/manual/
1104  environment:
1105    name: review/$CI_COMMIT_REF_NAME
1106    url: https://$CI_PROJECT_NAMESPACE.gitlab.io/-/$CI_PROJECT_NAME/-/jobs/$CI_JOB_ID/artifacts/public/html/index.html
1107  artifacts:
1108    paths:
1109      - public
1110    expire_in: 4 days
1111  except:
1112    variables:
1113      - $PETSC_CI_SCHEDULED =~ /yes/
1114
1115#
1116# Deploy documentation using GitLab pages
1117#
1118pages:  # this job name has special meaning to GitLab
1119  extends: .docs
1120  interruptible: true
1121  script:
1122    - mkdir -p ../public/ && cp public/* ../public/
1123    - git fetch --unshallow --no-tags origin +release:remotes/origin/release +main:remotes/origin/main
1124    - git checkout origin/main && pip install -r requirements.txt && make website-deploy SPHINXOPTS="-j 1" BUILDDIR="../public/main" && make latexpdf && mkdir -p ../public/main/docs/manual && cp _build/latex/manual.pdf ../public/main/docs/manual/
1125    - make clean BUILDDIR="../public/release"
1126    - git checkout origin/release && pip install -r requirements.txt && make website-deploy SPHINXOPTS="-j 1"  BUILDDIR="../public/release" && make latexpdf && mkdir -p ../public/release/docs/manual && cp _build/latex/manual.pdf ../public/release/docs/manual/
1127    - rm -rf ../public/*/.doctrees
1128  only:
1129    variables:
1130      - $PETSC_CI_SCHEDULED == "yes"
1131  artifacts:
1132    paths:
1133      - public
1134    expire_in: 4 days
1135
1136#
1137#
1138# The following tests are experimental; more tests by users at other sites may be added below this.  Experimental test
1139# that fail produce a warning, but do not block execution of a pipeline.
1140#
1141
1142.test-experimental:
1143  extends: .test
1144  allow_failure: true
1145
1146