xref: /petsc/config/BuildSystem/config/packages/pflotran.py (revision a336c15037c72f93cd561f5a5e11e93175f2efd9) 
1import config.package
2import os
3
4class Configure(config.package.GNUPackage):
5  def __init__(self, framework):
6    config.package.GNUPackage.__init__(self, framework)
7    self.gitcommit         = 'xsdk-0.2.0-rc1'
8    self.download          = ['git://https://bitbucket.org/pflotran/pflotran']
9    self.functions         = []
10    self.includes          = []
11    self.hastests          = 1
12    self.buildLanguages    = ['FC']    # 1 means requires fortran
13    self.linkedbypetsc     = 0
14    self.useddirectly      = 0
15    self.skippackagelibincludedirs = 1
16    return
17
18  def setupDependencies(self, framework):
19    config.package.GNUPackage.setupDependencies(self, framework)
20    self.mpi      = framework.require('config.packages.MPI', self)
21    self.hdf5     = framework.require('config.packages.HDF5', self)
22    self.deps     = [self.mpi]
23    self.odeps    = [self.hdf5]
24    return
25
26  # the install is delayed until postProcess() since pflotran install requires PETSc to be installed before pflotran can be built
27  def Install(self):
28    return self.installDir
29
30  def configureLibrary(self):
31    ''' Since pflotran cannot be built until after PETSc is compiled we need to just assume the downloaded library will work'''
32    if 'with-pflotran' in self.framework.clArgDB:
33      raise RuntimeError('Pflotran does not support --with-pflotran; only --download-pflotran')
34    if 'with-pflotran-dir' in self.framework.clArgDB:
35      raise RuntimeError('Pflotran does not support --with-pflotran-dir; only --download-pflotran')
36    if 'with-pflotran-shared' in self.framework.clArgDB:
37      raise RuntimeError('Pflotran does not support --with-pflotran-shared')
38
39    self.checkDownload()
40    self.include = [os.path.join(self.installDir,'include')]
41    self.lib     = [os.path.join(self.installDir,'lib','libpflotranchem.a'),os.path.join(self.installDir,'lib','libpflotran.a')]
42    self.found   = 1
43    self.dlib    = self.lib
44    if not hasattr(self.framework, 'packages'):
45      self.framework.packages = []
46    self.framework.packages.append(self)
47
48  def postProcess(self):
49    self.compilePETSc()
50
51    try:
52      self.logPrintBox('Configure Pflotran; this may take several minutes')
53      # TODO: remove this prefix code and use the mechanisms in package.py for selecting the destination directory; currently if postProcess is used
54      # TODO: package.py may not allow installing in prefix location
55      if self.framework.argDB['prefix']:
56        PDIR   = 'PETSC_DIR='+self.framework.argDB['prefix']
57        PARCH  = ''
58        PREFIX = '--prefix='+self.framework.argDB['prefix']
59      else:
60        PDIR   = 'PETSC_DIR='+self.petscdir.dir
61        PARCH  = 'PETSC_ARCH='+self.arch
62        PREFIX = '--prefix='+os.path.join(self.petscdir.dir,self.arch)
63      output,err,ret  = config.package.GNUPackage.executeShellCommand('cd '+self.packageDir+' && '+PARCH+' '+PDIR+' ./configure all '+PREFIX,timeout=60, log = self.log)
64      self.log.write(output+err)
65
66      self.logPrintBox('Compiling Pflotran; this may take several minutes')
67      output,err,ret  = config.package.GNUPackage.executeShellCommand('cd '+self.packageDir+' && make all',timeout=1000, log = self.log)
68      self.log.write(output+err)
69
70      self.logPrintBox('Installing Pflotran; this may take several minutes')
71      output,err,ret  = config.package.GNUPackage.executeShellCommand('cd '+self.packageDir+' && make install',timeout=100, log = self.log)
72      self.log.write(output+err)
73    except RuntimeError as e:
74      raise RuntimeError('Error configuring/compiling or installing Pflotran: '+str(e))
75