129921a8fSScott Kruger 229921a8fSScott Kruger 329921a8fSScott Krugerscriptname=`basename $0` 429921a8fSScott Krugerrundir=${scriptname%.sh} 534929e0eSSatish BalayTIMEOUT=60 629921a8fSScott Kruger 729921a8fSScott Krugerif test "$PWD"!=`dirname $0`; then 829921a8fSScott Kruger cd `dirname $0` 929921a8fSScott Krugerfi 106c91caf2SScott Krugerif test -d "${rundir}" && test -n "${rundir}"; then 1147e61e69SScott Kruger rm -f ${rundir}/*.tmp ${rundir}/*.err ${rundir}/*.out 126c91caf2SScott Krugerfi 1329921a8fSScott Krugermkdir -p ${rundir} 1401ad06ccSBarry Smithif test -d "${runfiles}"; then 1501ad06ccSBarry Smith cp -r ${runfiles} ${rundir} 1601ad06ccSBarry Smithelif test -n "${runfiles}"; then 172666df57SScott Kruger cp ${runfiles} ${rundir} 18d7871bd4SScott Krugerfi 1929921a8fSScott Krugercd ${rundir} 2029921a8fSScott Kruger 2129921a8fSScott Kruger# 2229921a8fSScott Kruger# Method to print out general and script specific options 2329921a8fSScott Kruger# 2429921a8fSScott Krugerprint_usage() { 2529921a8fSScott Kruger 2629921a8fSScott Krugercat >&2 <<EOF 2729921a8fSScott KrugerUsage: $0 [options] 2829921a8fSScott Kruger 2929921a8fSScott KrugerOPTIONS 3029921a8fSScott Kruger -a <args> ......... Override default arguments 3129921a8fSScott Kruger -c <cleanup> ...... Cleanup (remove generated files) 32e53dc769SScott Kruger -d ................ Launch in debugger 3329921a8fSScott Kruger -e <args> ......... Add extra arguments to default 342f2809e3SToby Isaac -f ................ force attempt to run test that would otherwise be skipped 3529921a8fSScott Kruger -h ................ help: print this message 3629921a8fSScott Kruger -n <integer> ...... Override the number of processors to use 37ba2c5286SScott Kruger -j ................ Pass -j to petscdiff (just use diff) 38ba2c5286SScott Kruger -J <arg> .......... Pass -J to petscdiff (just use diff with arg) 39ba2c5286SScott Kruger -m ................ Update results using petscdiff 40f50802fbSScott Kruger -M ................ Update alt files using petscdiff 410a091e3eSScott Kruger -t ................ Override the default timeout (default=$TIMEOUT sec) 42b047ed2bSScott Kruger -V ................ run Valgrind 4329921a8fSScott Kruger -v ................ Verbose: Print commands 4429921a8fSScott KrugerEOF 4529921a8fSScott Kruger 4629921a8fSScott Kruger if declare -f extrausage > /dev/null; then extrausage; fi 4729921a8fSScott Kruger exit $1 4829921a8fSScott Kruger} 4929921a8fSScott Kruger### 5029921a8fSScott Kruger## Arguments for overriding things 5129921a8fSScott Kruger# 5229921a8fSScott Krugerverbose=false 5329921a8fSScott Krugercleanup=false 54e53dc769SScott Krugerdebugger=false 552f2809e3SToby Isaacforce=false 56d4417257SScott Krugerdiff_flags="" 57f50802fbSScott Krugerwhile getopts "a:cde:fhjJ:mMn:t:vV" arg 5829921a8fSScott Krugerdo 5929921a8fSScott Kruger case $arg in 60ba2c5286SScott Kruger a ) args="$OPTARG" ;; 6129921a8fSScott Kruger c ) cleanup=true ;; 62e53dc769SScott Kruger d ) debugger=true ;; 63ba2c5286SScott Kruger e ) extra_args="$OPTARG" ;; 642f2809e3SToby Isaac f ) force=true ;; 6529921a8fSScott Kruger h ) print_usage; exit ;; 66ba2c5286SScott Kruger n ) nsize="$OPTARG" ;; 67ba2c5286SScott Kruger j ) diff_flags="-j" ;; 68ba2c5286SScott Kruger J ) diff_flags="-J $OPTARG" ;; 69ba2c5286SScott Kruger m ) diff_flags="-m" ;; 70f50802fbSScott Kruger M ) diff_flags="-M" ;; 710a091e3eSScott Kruger t ) TIMEOUT=$OPTARG ;; 72b047ed2bSScott Kruger V ) mpiexec="petsc_mpiexec_valgrind $mpiexec" ;; 7329921a8fSScott Kruger v ) verbose=true ;; 7429921a8fSScott Kruger *) # To take care of any extra args 7529921a8fSScott Kruger if test -n "$OPTARG"; then 7629921a8fSScott Kruger eval $arg=\"$OPTARG\" 7729921a8fSScott Kruger else 7829921a8fSScott Kruger eval $arg=found 7929921a8fSScott Kruger fi 8029921a8fSScott Kruger ;; 8129921a8fSScott Kruger esac 8229921a8fSScott Krugerdone 8329921a8fSScott Krugershift $(( $OPTIND - 1 )) 8429921a8fSScott Kruger 850a091e3eSScott Kruger# Individual tests can extend the default 860a091e3eSScott KrugerTIMEOUT=$((TIMEOUT*timeoutfactor)) 87*bbf1c217SScott KrugerSTARTTIME=`date +%s` 880a091e3eSScott Kruger 8929921a8fSScott Krugerif test -n "$extra_args"; then 9029921a8fSScott Kruger args="$args $extra_args" 9129921a8fSScott Krugerfi 92e53dc769SScott Krugerif $debugger; then 93e53dc769SScott Kruger args="-start_in_debugger $args" 94e53dc769SScott Krugerfi 95e53dc769SScott Kruger 9629921a8fSScott Kruger 9729921a8fSScott Kruger# Init 9829921a8fSScott Krugersuccess=0; failed=0; failures=""; rmfiles="" 9929921a8fSScott Krugertotal=0 10029921a8fSScott Krugertodo=-1; skip=-1 1010a091e3eSScott Krugerjob_level=0 10229921a8fSScott Kruger 10329921a8fSScott Krugerfunction petsc_testrun() { 10429921a8fSScott Kruger # First arg = Basic command 10529921a8fSScott Kruger # Second arg = stdout file 10629921a8fSScott Kruger # Third arg = stderr file 10729921a8fSScott Kruger # Fourth arg = label for reporting 10829921a8fSScott Kruger # Fifth arg = Filter 10929921a8fSScott Kruger rmfiles="${rmfiles} $2 $3" 11029921a8fSScott Kruger tlabel=$4 11129921a8fSScott Kruger filter=$5 1120a091e3eSScott Kruger job_control=true 11329921a8fSScott Kruger cmd="$1 > $2 2> $3" 1140a091e3eSScott Kruger if test -n "$filter"; then 1151b548e17SScott Kruger if test "${filter:0:6}"=="Error:"; then 1160a091e3eSScott Kruger job_control=false # redirection error method causes job control probs 1171b548e17SScott Kruger filter=${filter##Error:} 118fb2b1c94SScott Kruger cmd="$1 2>&1 | cat > $2" 11929921a8fSScott Kruger fi 1201b548e17SScott Kruger fi 1211263882eSScott Kruger echo "$cmd" > ${tlabel}.sh; chmod 755 ${tlabel}.sh 1227a853109SScott Kruger 1230a091e3eSScott Kruger if $job_control; then 1240a091e3eSScott Kruger # The action: 1250a091e3eSScott Kruger eval "($cmd) &" 1260a091e3eSScott Kruger pid=$! 1270a091e3eSScott Kruger # Put a watcher process in that will kill a job that exceeds limit 128c173c275SScott Kruger $config_dir/watchtime.sh $pid $TIMEOUT & 1290a091e3eSScott Kruger watcher=$! 1300a091e3eSScott Kruger 1310a091e3eSScott Kruger # See if the job we want finishes 1320a091e3eSScott Kruger wait $pid 2> /dev/null 1330a091e3eSScott Kruger cmd_res=$? 1340a091e3eSScott Kruger if ps -p $watcher > /dev/null; then 1350a091e3eSScott Kruger # Keep processes tidy by killing watcher 1366ff014a0SScott Kruger pkill -13 -P $watcher 1370a091e3eSScott Kruger wait $watcher 2>/dev/null # Wait used here to capture the kill message 1380a091e3eSScott Kruger else 1390a091e3eSScott Kruger # Timeout 1400a091e3eSScott Kruger cmd_res=1 1410a091e3eSScott Kruger echo "Exceeded timeout limit of $TIMEOUT s" > $3 1420a091e3eSScott Kruger fi 1430a091e3eSScott Kruger else 1440a091e3eSScott Kruger # The action -- assume no timeout needed 1451263882eSScott Kruger eval "$cmd" 1460a091e3eSScott Kruger # We are testing error codes so just make it pass 1470a091e3eSScott Kruger cmd_res=0 1480a091e3eSScott Kruger fi 1490a091e3eSScott Kruger 1500a091e3eSScott Kruger # Handle filters separately and assume no timeout check needed 1510a091e3eSScott Kruger if test -n "$filter"; then 1520a091e3eSScott Kruger cmd="cat $2 | $filter > $2.tmp 2>> $3 && mv $2.tmp $2" 1531263882eSScott Kruger echo "$cmd" >> ${tlabel}.sh 1540a091e3eSScott Kruger eval "$cmd" 1550a091e3eSScott Kruger fi 1560a091e3eSScott Kruger 1570a091e3eSScott Kruger # Report errors 1587a853109SScott Kruger if test $cmd_res == 0; then 15902afe9ecSJed Brown if "${verbose}"; then 1600a091e3eSScott Kruger printf "ok $tlabel $cmd\n" | tee -a ${testlogfile} 16102afe9ecSJed Brown else 1620a091e3eSScott Kruger printf "ok $tlabel\n" | tee -a ${testlogfile} 16302afe9ecSJed Brown fi 16429921a8fSScott Kruger let success=$success+1 16529921a8fSScott Kruger else 16664ca018dSScott Kruger if "${verbose}"; then 1670a091e3eSScott Kruger printf "not ok $tlabel $cmd\n" | tee -a ${testlogfile} 16864ca018dSScott Kruger else 1690a091e3eSScott Kruger printf "not ok $tlabel\n" | tee -a ${testlogfile} 17064ca018dSScott Kruger fi 1717be205c7SScott Kruger # We've had tests fail but stderr->stdout. Fix with this test. 1727be205c7SScott Kruger if test -s $3; then 1730a091e3eSScott Kruger awk '{print "#\t" $0}' < $3 | tee -a ${testlogfile} 1747be205c7SScott Kruger else 1757be205c7SScott Kruger awk '{print "#\t" $0}' < $2 | tee -a ${testlogfile} 1767be205c7SScott Kruger fi 17729921a8fSScott Kruger let failed=$failed+1 17829921a8fSScott Kruger failures="$failures $tlabel" 17929921a8fSScott Kruger fi 18029921a8fSScott Kruger let total=$success+$failed 1817a853109SScott Kruger return $cmd_res 18229921a8fSScott Kruger} 18329921a8fSScott Kruger 18429921a8fSScott Krugerfunction petsc_testend() { 18529921a8fSScott Kruger logfile=$1/counts/${label}.counts 18629921a8fSScott Kruger logdir=`dirname $logfile` 18729921a8fSScott Kruger if ! test -d "$logdir"; then 18829921a8fSScott Kruger mkdir -p $logdir 18929921a8fSScott Kruger fi 19029921a8fSScott Kruger if ! test -e "$logfile"; then 19129921a8fSScott Kruger touch $logfile 19229921a8fSScott Kruger fi 19329921a8fSScott Kruger printf "total $total\n" > $logfile 19429921a8fSScott Kruger printf "success $success\n" >> $logfile 19529921a8fSScott Kruger printf "failed $failed\n" >> $logfile 19629921a8fSScott Kruger printf "failures $failures\n" >> $logfile 19729921a8fSScott Kruger if test ${todo} -gt 0; then 19829921a8fSScott Kruger printf "todo $todo\n" >> $logfile 19929921a8fSScott Kruger fi 20029921a8fSScott Kruger if test ${skip} -gt 0; then 20129921a8fSScott Kruger printf "skip $skip\n" >> $logfile 20229921a8fSScott Kruger fi 203*bbf1c217SScott Kruger ENDTIME=`date +%s` 204*bbf1c217SScott Kruger printf "time $(($ENDTIME - $STARTTIME))\n" >> $logfile 20529921a8fSScott Kruger if $cleanup; then 20629921a8fSScott Kruger echo "Cleaning up" 20729921a8fSScott Kruger /bin/rm -f $rmfiles 20829921a8fSScott Kruger fi 20929921a8fSScott Kruger} 210296e37cfSJed Brown 21126646c0bSSatish Balayfunction petsc_mpiexec_valgrind() { 21226646c0bSSatish Balay mpiexec=$1;shift 21326646c0bSSatish Balay npopt=$1;shift 21426646c0bSSatish Balay np=$1;shift 21526646c0bSSatish Balay 216c173c275SScott Kruger valgrind="valgrind -q --tool=memcheck --leak-check=yes --num-callers=20 --track-origins=yes --suppressions=$petsc_bindir/maint/petsc-val.supp" 217c173c275SScott Kruger 21826646c0bSSatish Balay $mpiexec $npopt $np $valgrind $* 21926646c0bSSatish Balay} 220296e37cfSJed Brownexport LC_ALL=C 221