xref: /petsc/config/petsc_harness.sh (revision bbf1c21708b30c89bbb58e3fdaa016454489abec)
129921a8fSScott Kruger
229921a8fSScott Kruger
329921a8fSScott Krugerscriptname=`basename $0`
429921a8fSScott Krugerrundir=${scriptname%.sh}
534929e0eSSatish BalayTIMEOUT=60
629921a8fSScott Kruger
729921a8fSScott Krugerif test "$PWD"!=`dirname $0`; then
829921a8fSScott Kruger  cd `dirname $0`
929921a8fSScott Krugerfi
106c91caf2SScott Krugerif test -d "${rundir}" && test -n "${rundir}"; then
1147e61e69SScott Kruger  rm -f ${rundir}/*.tmp ${rundir}/*.err ${rundir}/*.out
126c91caf2SScott Krugerfi
1329921a8fSScott Krugermkdir -p ${rundir}
1401ad06ccSBarry Smithif test -d "${runfiles}"; then
1501ad06ccSBarry Smith  cp -r ${runfiles} ${rundir}
1601ad06ccSBarry Smithelif test -n "${runfiles}"; then
172666df57SScott Kruger  cp ${runfiles} ${rundir}
18d7871bd4SScott Krugerfi
1929921a8fSScott Krugercd ${rundir}
2029921a8fSScott Kruger
2129921a8fSScott Kruger#
2229921a8fSScott Kruger# Method to print out general and script specific options
2329921a8fSScott Kruger#
2429921a8fSScott Krugerprint_usage() {
2529921a8fSScott Kruger
2629921a8fSScott Krugercat >&2 <<EOF
2729921a8fSScott KrugerUsage: $0 [options]
2829921a8fSScott Kruger
2929921a8fSScott KrugerOPTIONS
3029921a8fSScott Kruger  -a <args> ......... Override default arguments
3129921a8fSScott Kruger  -c <cleanup> ...... Cleanup (remove generated files)
32e53dc769SScott Kruger  -d ................ Launch in debugger
3329921a8fSScott Kruger  -e <args> ......... Add extra arguments to default
342f2809e3SToby Isaac  -f ................ force attempt to run test that would otherwise be skipped
3529921a8fSScott Kruger  -h ................ help: print this message
3629921a8fSScott Kruger  -n <integer> ...... Override the number of processors to use
37ba2c5286SScott Kruger  -j ................ Pass -j to petscdiff (just use diff)
38ba2c5286SScott Kruger  -J <arg> .......... Pass -J to petscdiff (just use diff with arg)
39ba2c5286SScott Kruger  -m ................ Update results using petscdiff
40f50802fbSScott Kruger  -M ................ Update alt files using petscdiff
410a091e3eSScott Kruger  -t ................ Override the default timeout (default=$TIMEOUT sec)
42b047ed2bSScott Kruger  -V ................ run Valgrind
4329921a8fSScott Kruger  -v ................ Verbose: Print commands
4429921a8fSScott KrugerEOF
4529921a8fSScott Kruger
4629921a8fSScott Kruger  if declare -f extrausage > /dev/null; then extrausage; fi
4729921a8fSScott Kruger  exit $1
4829921a8fSScott Kruger}
4929921a8fSScott Kruger###
5029921a8fSScott Kruger##  Arguments for overriding things
5129921a8fSScott Kruger#
5229921a8fSScott Krugerverbose=false
5329921a8fSScott Krugercleanup=false
54e53dc769SScott Krugerdebugger=false
552f2809e3SToby Isaacforce=false
56d4417257SScott Krugerdiff_flags=""
57f50802fbSScott Krugerwhile getopts "a:cde:fhjJ:mMn:t:vV" arg
5829921a8fSScott Krugerdo
5929921a8fSScott Kruger  case $arg in
60ba2c5286SScott Kruger    a ) args="$OPTARG"       ;;
6129921a8fSScott Kruger    c ) cleanup=true         ;;
62e53dc769SScott Kruger    d ) debugger=true        ;;
63ba2c5286SScott Kruger    e ) extra_args="$OPTARG" ;;
642f2809e3SToby Isaac    f ) force=true           ;;
6529921a8fSScott Kruger    h ) print_usage; exit    ;;
66ba2c5286SScott Kruger    n ) nsize="$OPTARG"      ;;
67ba2c5286SScott Kruger    j ) diff_flags="-j"      ;;
68ba2c5286SScott Kruger    J ) diff_flags="-J $OPTARG" ;;
69ba2c5286SScott Kruger    m ) diff_flags="-m"      ;;
70f50802fbSScott Kruger    M ) diff_flags="-M"      ;;
710a091e3eSScott Kruger    t ) TIMEOUT=$OPTARG      ;;
72b047ed2bSScott Kruger    V ) mpiexec="petsc_mpiexec_valgrind $mpiexec" ;;
7329921a8fSScott Kruger    v ) verbose=true         ;;
7429921a8fSScott Kruger    *)  # To take care of any extra args
7529921a8fSScott Kruger      if test -n "$OPTARG"; then
7629921a8fSScott Kruger        eval $arg=\"$OPTARG\"
7729921a8fSScott Kruger      else
7829921a8fSScott Kruger        eval $arg=found
7929921a8fSScott Kruger      fi
8029921a8fSScott Kruger      ;;
8129921a8fSScott Kruger  esac
8229921a8fSScott Krugerdone
8329921a8fSScott Krugershift $(( $OPTIND - 1 ))
8429921a8fSScott Kruger
850a091e3eSScott Kruger# Individual tests can extend the default
860a091e3eSScott KrugerTIMEOUT=$((TIMEOUT*timeoutfactor))
87*bbf1c217SScott KrugerSTARTTIME=`date +%s`
880a091e3eSScott Kruger
8929921a8fSScott Krugerif test -n "$extra_args"; then
9029921a8fSScott Kruger  args="$args $extra_args"
9129921a8fSScott Krugerfi
92e53dc769SScott Krugerif $debugger; then
93e53dc769SScott Kruger  args="-start_in_debugger $args"
94e53dc769SScott Krugerfi
95e53dc769SScott Kruger
9629921a8fSScott Kruger
9729921a8fSScott Kruger# Init
9829921a8fSScott Krugersuccess=0; failed=0; failures=""; rmfiles=""
9929921a8fSScott Krugertotal=0
10029921a8fSScott Krugertodo=-1; skip=-1
1010a091e3eSScott Krugerjob_level=0
10229921a8fSScott Kruger
10329921a8fSScott Krugerfunction petsc_testrun() {
10429921a8fSScott Kruger  # First arg = Basic command
10529921a8fSScott Kruger  # Second arg = stdout file
10629921a8fSScott Kruger  # Third arg = stderr file
10729921a8fSScott Kruger  # Fourth arg = label for reporting
10829921a8fSScott Kruger  # Fifth arg = Filter
10929921a8fSScott Kruger  rmfiles="${rmfiles} $2 $3"
11029921a8fSScott Kruger  tlabel=$4
11129921a8fSScott Kruger  filter=$5
1120a091e3eSScott Kruger  job_control=true
11329921a8fSScott Kruger  cmd="$1 > $2 2> $3"
1140a091e3eSScott Kruger  if test -n "$filter"; then
1151b548e17SScott Kruger    if test "${filter:0:6}"=="Error:"; then
1160a091e3eSScott Kruger      job_control=false      # redirection error method causes job control probs
1171b548e17SScott Kruger      filter=${filter##Error:}
118fb2b1c94SScott Kruger      cmd="$1 2>&1 | cat > $2"
11929921a8fSScott Kruger    fi
1201b548e17SScott Kruger  fi
1211263882eSScott Kruger  echo "$cmd" > ${tlabel}.sh; chmod 755 ${tlabel}.sh
1227a853109SScott Kruger
1230a091e3eSScott Kruger  if $job_control; then
1240a091e3eSScott Kruger    # The action:
1250a091e3eSScott Kruger    eval "($cmd) &"
1260a091e3eSScott Kruger    pid=$!
1270a091e3eSScott Kruger    # Put a watcher process in that will kill a job that exceeds limit
128c173c275SScott Kruger    $config_dir/watchtime.sh $pid $TIMEOUT &
1290a091e3eSScott Kruger    watcher=$!
1300a091e3eSScott Kruger
1310a091e3eSScott Kruger    # See if the job we want finishes
1320a091e3eSScott Kruger    wait $pid 2> /dev/null
1330a091e3eSScott Kruger    cmd_res=$?
1340a091e3eSScott Kruger    if ps -p $watcher > /dev/null; then
1350a091e3eSScott Kruger      # Keep processes tidy by killing watcher
1366ff014a0SScott Kruger      pkill -13 -P $watcher
1370a091e3eSScott Kruger      wait $watcher 2>/dev/null  # Wait used here to capture the kill message
1380a091e3eSScott Kruger    else
1390a091e3eSScott Kruger      # Timeout
1400a091e3eSScott Kruger      cmd_res=1
1410a091e3eSScott Kruger      echo "Exceeded timeout limit of $TIMEOUT s" > $3
1420a091e3eSScott Kruger    fi
1430a091e3eSScott Kruger  else
1440a091e3eSScott Kruger    # The action -- assume no timeout needed
1451263882eSScott Kruger    eval "$cmd"
1460a091e3eSScott Kruger    # We are testing error codes so just make it pass
1470a091e3eSScott Kruger    cmd_res=0
1480a091e3eSScott Kruger  fi
1490a091e3eSScott Kruger
1500a091e3eSScott Kruger  # Handle filters separately and assume no timeout check needed
1510a091e3eSScott Kruger  if test -n "$filter"; then
1520a091e3eSScott Kruger    cmd="cat $2 | $filter > $2.tmp 2>> $3 && mv $2.tmp $2"
1531263882eSScott Kruger    echo "$cmd" >> ${tlabel}.sh
1540a091e3eSScott Kruger    eval "$cmd"
1550a091e3eSScott Kruger  fi
1560a091e3eSScott Kruger
1570a091e3eSScott Kruger  # Report errors
1587a853109SScott Kruger  if test $cmd_res == 0; then
15902afe9ecSJed Brown    if "${verbose}"; then
1600a091e3eSScott Kruger     printf "ok $tlabel $cmd\n" | tee -a ${testlogfile}
16102afe9ecSJed Brown    else
1620a091e3eSScott Kruger     printf "ok $tlabel\n" | tee -a ${testlogfile}
16302afe9ecSJed Brown    fi
16429921a8fSScott Kruger    let success=$success+1
16529921a8fSScott Kruger  else
16664ca018dSScott Kruger    if "${verbose}"; then
1670a091e3eSScott Kruger      printf "not ok $tlabel $cmd\n" | tee -a ${testlogfile}
16864ca018dSScott Kruger    else
1690a091e3eSScott Kruger      printf "not ok $tlabel\n" | tee -a ${testlogfile}
17064ca018dSScott Kruger    fi
1717be205c7SScott Kruger    # We've had tests fail but stderr->stdout. Fix with this test.
1727be205c7SScott Kruger    if test -s $3; then
1730a091e3eSScott Kruger       awk '{print "#\t" $0}' < $3 | tee -a ${testlogfile}
1747be205c7SScott Kruger    else
1757be205c7SScott Kruger       awk '{print "#\t" $0}' < $2 | tee -a ${testlogfile}
1767be205c7SScott Kruger    fi
17729921a8fSScott Kruger    let failed=$failed+1
17829921a8fSScott Kruger    failures="$failures $tlabel"
17929921a8fSScott Kruger  fi
18029921a8fSScott Kruger  let total=$success+$failed
1817a853109SScott Kruger  return $cmd_res
18229921a8fSScott Kruger}
18329921a8fSScott Kruger
18429921a8fSScott Krugerfunction petsc_testend() {
18529921a8fSScott Kruger  logfile=$1/counts/${label}.counts
18629921a8fSScott Kruger  logdir=`dirname $logfile`
18729921a8fSScott Kruger  if ! test -d "$logdir"; then
18829921a8fSScott Kruger    mkdir -p $logdir
18929921a8fSScott Kruger  fi
19029921a8fSScott Kruger  if ! test -e "$logfile"; then
19129921a8fSScott Kruger    touch $logfile
19229921a8fSScott Kruger  fi
19329921a8fSScott Kruger  printf "total $total\n" > $logfile
19429921a8fSScott Kruger  printf "success $success\n" >> $logfile
19529921a8fSScott Kruger  printf "failed $failed\n" >> $logfile
19629921a8fSScott Kruger  printf "failures $failures\n" >> $logfile
19729921a8fSScott Kruger  if test ${todo} -gt 0; then
19829921a8fSScott Kruger    printf "todo $todo\n" >> $logfile
19929921a8fSScott Kruger  fi
20029921a8fSScott Kruger  if test ${skip} -gt 0; then
20129921a8fSScott Kruger    printf "skip $skip\n" >> $logfile
20229921a8fSScott Kruger  fi
203*bbf1c217SScott Kruger  ENDTIME=`date +%s`
204*bbf1c217SScott Kruger  printf "time $(($ENDTIME - $STARTTIME))\n" >> $logfile
20529921a8fSScott Kruger  if $cleanup; then
20629921a8fSScott Kruger    echo "Cleaning up"
20729921a8fSScott Kruger    /bin/rm -f $rmfiles
20829921a8fSScott Kruger  fi
20929921a8fSScott Kruger}
210296e37cfSJed Brown
21126646c0bSSatish Balayfunction petsc_mpiexec_valgrind() {
21226646c0bSSatish Balay  mpiexec=$1;shift
21326646c0bSSatish Balay  npopt=$1;shift
21426646c0bSSatish Balay  np=$1;shift
21526646c0bSSatish Balay
216c173c275SScott Kruger  valgrind="valgrind -q --tool=memcheck --leak-check=yes --num-callers=20 --track-origins=yes --suppressions=$petsc_bindir/maint/petsc-val.supp"
217c173c275SScott Kruger
21826646c0bSSatish Balay  $mpiexec $npopt $np $valgrind $*
21926646c0bSSatish Balay}
220296e37cfSJed Brownexport LC_ALL=C
221