1 2 3scriptname=`basename $0` 4rundir=${scriptname%.sh} 5TIMEOUT=60 6 7if test "$PWD"!=`dirname $0`; then 8 cd `dirname $0` 9fi 10if test -d "${rundir}" && test -n "${rundir}"; then 11 rm -f ${rundir}/*.tmp ${rundir}/*.err ${rundir}/*.out 12fi 13mkdir -p ${rundir} 14if test -n "${runfiles}"; then 15 for runfile in ${runfiles}; do 16 subdir=`dirname ${runfile}` 17 mkdir -p ${rundir}/${subdir} 18 cp -r ${runfile} ${rundir}/${subdir} 19 done 20fi 21cd ${rundir} 22 23# 24# Method to print out general and script specific options 25# 26print_usage() { 27 28cat >&2 <<EOF 29Usage: $0 [options] 30 31OPTIONS 32 -a <args> ......... Override default arguments 33 -c <cleanup> ...... Cleanup (remove generated files) 34 -d ................ Launch in debugger 35 -e <args> ......... Add extra arguments to default 36 -f ................ force attempt to run test that would otherwise be skipped 37 -h ................ help: print this message 38 -n <integer> ...... Override the number of processors to use 39 -j ................ Pass -j to petscdiff (just use diff) 40 -J <arg> .......... Pass -J to petscdiff (just use diff with arg) 41 -m ................ Update results using petscdiff 42 -M ................ Update alt files using petscdiff 43 -o <arg> .......... Output format: 'interactive', 'err_only' 44 -t ................ Override the default timeout (default=$TIMEOUT sec) 45 -V ................ run Valgrind 46 -v ................ Verbose: Print commands 47EOF 48 49 if declare -f extrausage > /dev/null; then extrausage; fi 50 exit $1 51} 52### 53## Arguments for overriding things 54# 55output_fmt="interactive" 56verbose=false 57cleanup=false 58debugger=false 59force=false 60diff_flags="" 61while getopts "a:cde:fhjJ:mMn:o:t:vV" arg 62do 63 case $arg in 64 a ) args="$OPTARG" ;; 65 c ) cleanup=true ;; 66 d ) debugger=true ;; 67 e ) extra_args="$OPTARG" ;; 68 f ) force=true ;; 69 h ) print_usage; exit ;; 70 n ) nsize="$OPTARG" ;; 71 j ) diff_flags="-j" ;; 72 J ) diff_flags="-J $OPTARG" ;; 73 m ) diff_flags="-m" ;; 74 M ) diff_flags="-M" ;; 75 o ) output_fmt=$OPTARG ;; 76 t ) TIMEOUT=$OPTARG ;; 77 V ) mpiexec="petsc_mpiexec_valgrind $mpiexec" ;; 78 v ) verbose=true ;; 79 *) # To take care of any extra args 80 if test -n "$OPTARG"; then 81 eval $arg=\"$OPTARG\" 82 else 83 eval $arg=found 84 fi 85 ;; 86 esac 87done 88shift $(( $OPTIND - 1 )) 89 90# Individual tests can extend the default 91export MPIEXEC_TIMEOUT=$((TIMEOUT*timeoutfactor)) 92STARTTIME=`date +%s` 93 94if test -n "$extra_args"; then 95 args="$args $extra_args" 96fi 97if $debugger; then 98 args="-start_in_debugger $args" 99fi 100 101 102# Init 103success=0; failed=0; failures=""; rmfiles="" 104total=0 105todo=-1; skip=-1 106job_level=0 107 108function petsc_report_tapoutput() { 109 notornot=$1 110 test_label=$2 111 comment=$3 112 if test -n "$comment"; then 113 comment=" # ${comment}" 114 fi 115 116 tap_message="${notornot} ok ${test_label}${comment}" 117 118 # Log messages 119 printf "${tap_message}\n" >> ${testlogtapfile} 120 121 if test ${output_fmt} == "err_only"; then 122 if test -n "${notornot}"; then 123 printf "${tap_message}\n" | tee -a ${testlogerrfile} 124 fi 125 else 126 printf "${tap_message}\n" 127 fi 128} 129 130function petsc_testrun() { 131 # First arg = Basic command 132 # Second arg = stdout file 133 # Third arg = stderr file 134 # Fourth arg = label for reporting 135 # Fifth arg = Filter 136 rmfiles="${rmfiles} $2 $3" 137 tlabel=$4 138 filter=$5 139 cmd="$1 > $2 2> $3" 140 if test -n "$filter"; then 141 if test "${filter:0:6}"=="Error:"; then 142 filter=${filter##Error:} 143 cmd="$1 2>&1 | cat > $2" 144 fi 145 fi 146 echo "$cmd" > ${tlabel}.sh; chmod 755 ${tlabel}.sh 147 148 eval "{ time -p $cmd ; } 2>> timing.out" 149 cmd_res=$? 150 touch "$2" "$3" 151 # ETIMEDOUT=110 on most systems (used by Open MPI 3.0). MPICH uses 152 # 255. Earlier Open MPI returns 1 but outputs about MPIEXEC_TIMEOUT. 153 if [ $cmd_res -eq 110 -o $cmd_res -eq 255 ] || \ 154 fgrep -q -s 'APPLICATION TIMED OUT' "$2" "$3" || \ 155 fgrep -q -s MPIEXEC_TIMEOUT "$2" "$3" || \ 156 fgrep -q -s 'APPLICATION TERMINATED WITH THE EXIT STRING: job ending due to timeout' "$2" "$3" || \ 157 grep -q -s "Timeout after [0-9]* seconds. Terminating job" "$2" "$3"; then 158 timed_out=1 159 # If timed out, then ensure non-zero error code 160 if [ $cmd_res -eq 0 ]; then 161 cmd_res=1 162 fi 163 fi 164 165 # Handle filters separately and assume no timeout check needed 166 if test -n "$filter"; then 167 cmd="cat $2 | $filter > $2.tmp 2>> $3 ; mv $2.tmp $2" 168 echo "$cmd" >> ${tlabel}.sh 169 eval "$cmd" 170 fi 171 172 # Report errors 173 comment="" 174 if test $cmd_res == 0; then 175 if "${verbose}"; then 176 comment="${cmd}" 177 fi 178 petsc_report_tapoutput "" "$tlabel" "$comment" 179 let success=$success+1 180 else 181 if [ -n "$timed_out" ]; then 182 comment="Exceeded timeout limit of $MPIEXEC_TIMEOUT s" 183 else 184 comment="Error code: ${cmd_res}" 185 fi 186 petsc_report_tapoutput "not" "$tlabel" "$comment" 187 188 # Report errors in detail 189 if [ -z "$timed_out" ]; then 190 # We've had tests fail but stderr->stdout. Fix with this test. 191 if test -s $3; then 192 awk '{print "#\t" $0}' < $3 | tee -a ${testlogerrfile} 193 else 194 awk '{print "#\t" $0}' < $2 | tee -a ${testlogerrfile} 195 fi 196 fi 197 let failed=$failed+1 198 failures="$failures $tlabel" 199 fi 200 let total=$success+$failed 201 return $cmd_res 202} 203 204function petsc_testend() { 205 logfile=$1/counts/${label}.counts 206 logdir=`dirname $logfile` 207 if ! test -d "$logdir"; then 208 mkdir -p $logdir 209 fi 210 if ! test -e "$logfile"; then 211 touch $logfile 212 fi 213 printf "total $total\n" > $logfile 214 printf "success $success\n" >> $logfile 215 printf "failed $failed\n" >> $logfile 216 printf "failures $failures\n" >> $logfile 217 if test ${todo} -gt 0; then 218 printf "todo $todo\n" >> $logfile 219 fi 220 if test ${skip} -gt 0; then 221 printf "skip $skip\n" >> $logfile 222 fi 223 ENDTIME=`date +%s` 224 timing=`touch timing.out && egrep '(user|sys)' timing.out | awk '{if( sum1 == "" || $2 > sum1 ) { sum1=sprintf("%.2f",$2) } ; sum2 += sprintf("%.2f",$2)} END {printf "%.2f %.2f\n",sum1,sum2}'` 225 printf "time $timing\n" >> $logfile 226 if $cleanup; then 227 echo "Cleaning up" 228 /bin/rm -f $rmfiles 229 fi 230} 231 232function petsc_mpiexec_valgrind() { 233 mpiexec=$1;shift 234 npopt=$1;shift 235 np=$1;shift 236 237 valgrind="valgrind -q --tool=memcheck --leak-check=yes --num-callers=20 --track-origins=yes --suppressions=$petsc_bindir/maint/petsc-val.supp" 238 239 $mpiexec $npopt $np $valgrind $* 240} 241export LC_ALL=C 242