137045ce4SJed Brown /* 237045ce4SJed Brown Common tools for constructing discretizations 337045ce4SJed Brown */ 426bd1501SBarry Smith #if !defined(PETSCDT_H) 526bd1501SBarry Smith #define PETSCDT_H 637045ce4SJed Brown 737045ce4SJed Brown #include <petscsys.h> 837045ce4SJed Brown 9ac09b921SBarry Smith /* SUBMANSEC = DT */ 10ac09b921SBarry Smith 112cd22861SMatthew G. Knepley PETSC_EXTERN PetscClassId PETSCQUADRATURE_CLASSID; 122cd22861SMatthew G. Knepley 1321454ff5SMatthew G. Knepley /*S 1421454ff5SMatthew G. Knepley PetscQuadrature - Quadrature rule for integration. 1521454ff5SMatthew G. Knepley 16329bbf4eSMatthew G. Knepley Level: beginner 1721454ff5SMatthew G. Knepley 18db781477SPatrick Sanan .seealso: `PetscQuadratureCreate()`, `PetscQuadratureDestroy()` 1921454ff5SMatthew G. Knepley S*/ 2021454ff5SMatthew G. Knepley typedef struct _p_PetscQuadrature *PetscQuadrature; 2121454ff5SMatthew G. Knepley 228272889dSSatish Balay /*E 23916e780bShannah_mairs PetscGaussLobattoLegendreCreateType - algorithm used to compute the Gauss-Lobatto-Legendre nodes and weights 248272889dSSatish Balay 258272889dSSatish Balay Level: intermediate 268272889dSSatish Balay 27f2e8fe4dShannah_mairs $ PETSCGAUSSLOBATTOLEGENDRE_VIA_LINEAR_ALGEBRA - compute the nodes via linear algebra 28d410ae54Shannah_mairs $ PETSCGAUSSLOBATTOLEGENDRE_VIA_NEWTON - compute the nodes by solving a nonlinear equation with Newton's method 298272889dSSatish Balay 308272889dSSatish Balay E*/ 31f2e8fe4dShannah_mairs typedef enum {PETSCGAUSSLOBATTOLEGENDRE_VIA_LINEAR_ALGEBRA,PETSCGAUSSLOBATTOLEGENDRE_VIA_NEWTON} PetscGaussLobattoLegendreCreateType; 328272889dSSatish Balay 33d4afb720SToby Isaac /*E 34d4afb720SToby Isaac PetscDTNodeType - A description of strategies for generating nodes (both 35d4afb720SToby Isaac quadrature nodes and nodes for Lagrange polynomials) 36d4afb720SToby Isaac 37d4afb720SToby Isaac Level: intermediate 38d4afb720SToby Isaac 39d4afb720SToby Isaac $ PETSCDTNODES_DEFAULT - Nodes chosen by PETSc 40d4afb720SToby Isaac $ PETSCDTNODES_GAUSSJACOBI - Nodes at either Gauss-Jacobi or Gauss-Lobatto-Jacobi quadrature points 41d4afb720SToby Isaac $ PETSCDTNODES_EQUISPACED - Nodes equispaced either including the endpoints or excluding them 42d4afb720SToby Isaac $ PETSCDTNODES_TANHSINH - Nodes at Tanh-Sinh quadrature points 43d4afb720SToby Isaac 44d4afb720SToby Isaac Note: a PetscDTNodeType can be paired with a PetscBool to indicate whether 45d4afb720SToby Isaac the nodes include endpoints or not, and in the case of PETSCDT_GAUSSJACOBI 46d4afb720SToby Isaac with exponents for the weight function. 47d4afb720SToby Isaac 48d4afb720SToby Isaac E*/ 49d4afb720SToby Isaac typedef enum {PETSCDTNODES_DEFAULT=-1, PETSCDTNODES_GAUSSJACOBI, PETSCDTNODES_EQUISPACED, PETSCDTNODES_TANHSINH} PetscDTNodeType; 50d4afb720SToby Isaac 51*d3c69ad0SToby Isaac PETSC_EXTERN const char *const*const PetscDTNodeTypes; 52*d3c69ad0SToby Isaac 53*d3c69ad0SToby Isaac /*E 54*d3c69ad0SToby Isaac PetscDTSimplexQuadratureType - A description of classes of quadrature rules for simplices 55*d3c69ad0SToby Isaac 56*d3c69ad0SToby Isaac Level: intermediate 57*d3c69ad0SToby Isaac 58*d3c69ad0SToby Isaac $ PETSCDTSIMPLEXQUAD_DEFAULT - Quadrature rule chosen by PETSc 59*d3c69ad0SToby Isaac $ PETSCDTSIMPLEXQUAD_CONIC - Quadrature rules constructed as 60*d3c69ad0SToby Isaac conically-warped tensor products of 1D 61*d3c69ad0SToby Isaac Gauss-Jacobi quadrature rules. These are 62*d3c69ad0SToby Isaac explicitly computable in any dimension for any 63*d3c69ad0SToby Isaac degree, and the tensor-product structure can be 64*d3c69ad0SToby Isaac exploited by sum-factorization methods, but 65*d3c69ad0SToby Isaac they are not efficient in terms of nodes per 66*d3c69ad0SToby Isaac polynomial degree. 67*d3c69ad0SToby Isaac $ PETSCDTSIMPLEXQUAD_MINSYM - Quadrature rules that are fully symmetric 68*d3c69ad0SToby Isaac (symmetries of the simplex preserve the nodes 69*d3c69ad0SToby Isaac and weights) with minimal (or near minimal) 70*d3c69ad0SToby Isaac number of nodes. In dimensions higher than 1 71*d3c69ad0SToby Isaac these are not simple to compute, so lookup 72*d3c69ad0SToby Isaac tables are used. 73*d3c69ad0SToby Isaac 74*d3c69ad0SToby Isaac .seealso: `PetscDTSimplexQuadrature()` 75*d3c69ad0SToby Isaac E*/ 76*d3c69ad0SToby Isaac typedef enum {PETSCDTSIMPLEXQUAD_DEFAULT=-1, PETSCDTSIMPLEXQUAD_CONIC=0, PETSCDTSIMPLEXQUAD_MINSYM} PetscDTSimplexQuadratureType; 77*d3c69ad0SToby Isaac 78*d3c69ad0SToby Isaac PETSC_EXTERN const char *const*const PetscDTSimplexQuadratureTypes; 79d4afb720SToby Isaac 8021454ff5SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureCreate(MPI_Comm, PetscQuadrature *); 81c9638911SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureDuplicate(PetscQuadrature, PetscQuadrature *); 82bcede257SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureGetOrder(PetscQuadrature, PetscInt*); 83bcede257SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureSetOrder(PetscQuadrature, PetscInt); 84a6b92713SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureGetNumComponents(PetscQuadrature, PetscInt*); 85a6b92713SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureSetNumComponents(PetscQuadrature, PetscInt); 864f9ab2b4SJed Brown PETSC_EXTERN PetscErrorCode PetscQuadratureEqual(PetscQuadrature, PetscQuadrature, PetscBool*); 87a6b92713SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureGetData(PetscQuadrature, PetscInt*, PetscInt*, PetscInt*, const PetscReal *[], const PetscReal *[]); 88a6b92713SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureSetData(PetscQuadrature, PetscInt, PetscInt, PetscInt, const PetscReal [], const PetscReal []); 8921454ff5SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureView(PetscQuadrature, PetscViewer); 9021454ff5SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureDestroy(PetscQuadrature *); 91a0845e3aSMatthew G. Knepley 922df84da0SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDTTensorQuadratureCreate(PetscQuadrature, PetscQuadrature, PetscQuadrature *); 9389710940SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscQuadratureExpandComposite(PetscQuadrature, PetscInt, const PetscReal[], const PetscReal[], PetscQuadrature *); 9489710940SMatthew G. Knepley 95907761f8SToby Isaac PETSC_EXTERN PetscErrorCode PetscQuadraturePushForward(PetscQuadrature, PetscInt, const PetscReal[], const PetscReal[], const PetscReal[], PetscInt, PetscQuadrature *); 96907761f8SToby Isaac 9737045ce4SJed Brown PETSC_EXTERN PetscErrorCode PetscDTLegendreEval(PetscInt,const PetscReal*,PetscInt,const PetscInt*,PetscReal*,PetscReal*,PetscReal*); 98fbdc3dfeSToby Isaac PETSC_EXTERN PetscErrorCode PetscDTJacobiNorm(PetscReal,PetscReal,PetscInt,PetscReal *); 9994e21283SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTJacobiEval(PetscInt,PetscReal,PetscReal,const PetscReal*,PetscInt,const PetscInt*,PetscReal*,PetscReal*,PetscReal*); 100fbdc3dfeSToby Isaac PETSC_EXTERN PetscErrorCode PetscDTJacobiEvalJet(PetscReal,PetscReal,PetscInt,const PetscReal[],PetscInt,PetscInt,PetscReal[]); 101fbdc3dfeSToby Isaac PETSC_EXTERN PetscErrorCode PetscDTPKDEvalJet(PetscInt,PetscInt,const PetscReal[],PetscInt,PetscInt,PetscReal[]); 102d8f25ad8SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTPTrimmedSize(PetscInt,PetscInt,PetscInt,PetscInt*); 103d8f25ad8SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTPTrimmedEvalJet(PetscInt,PetscInt,const PetscReal[],PetscInt,PetscInt,PetscInt,PetscReal[]); 10437045ce4SJed Brown PETSC_EXTERN PetscErrorCode PetscDTGaussQuadrature(PetscInt,PetscReal,PetscReal,PetscReal*,PetscReal*); 10594e21283SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTGaussJacobiQuadrature(PetscInt,PetscReal,PetscReal,PetscReal,PetscReal,PetscReal*,PetscReal*); 10694e21283SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTGaussLobattoJacobiQuadrature(PetscInt,PetscReal,PetscReal,PetscReal,PetscReal,PetscReal*,PetscReal*); 107916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscDTGaussLobattoLegendreQuadrature(PetscInt,PetscGaussLobattoLegendreCreateType,PetscReal*,PetscReal*); 108194825f6SJed Brown PETSC_EXTERN PetscErrorCode PetscDTReconstructPoly(PetscInt,PetscInt,const PetscReal*,PetscInt,const PetscReal*,PetscReal*); 109a6b92713SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDTGaussTensorQuadrature(PetscInt,PetscInt,PetscInt,PetscReal,PetscReal,PetscQuadrature*); 110e6a796c3SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTStroudConicalQuadrature(PetscInt,PetscInt,PetscInt,PetscReal,PetscReal,PetscQuadrature*); 111*d3c69ad0SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTSimplexQuadrature(PetscInt,PetscInt,PetscDTSimplexQuadratureType,PetscQuadrature*); 11237045ce4SJed Brown 113b3c0f97bSTom Klotz PETSC_EXTERN PetscErrorCode PetscDTTanhSinhTensorQuadrature(PetscInt, PetscInt, PetscReal, PetscReal, PetscQuadrature *); 114d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDTTanhSinhIntegrate(void (*)(const PetscReal[], void *, PetscReal *), PetscReal, PetscReal, PetscInt, void *, PetscReal *); 115d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDTTanhSinhIntegrateMPFR(void (*)(const PetscReal[], void *, PetscReal *), PetscReal, PetscReal, PetscInt, void *, PetscReal *); 116b3c0f97bSTom Klotz 117916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreIntegrate(PetscInt, PetscReal *, PetscReal *, const PetscReal *, PetscReal *); 118916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreElementLaplacianCreate(PetscInt, PetscReal *, PetscReal *, PetscReal ***); 119916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreElementLaplacianDestroy(PetscInt, PetscReal *, PetscReal *, PetscReal ***); 120916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreElementGradientCreate(PetscInt, PetscReal *, PetscReal *, PetscReal ***, PetscReal ***); 121916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreElementGradientDestroy(PetscInt, PetscReal *, PetscReal *, PetscReal ***, PetscReal ***); 122916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreElementAdvectionCreate(PetscInt, PetscReal *, PetscReal *, PetscReal ***); 123916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreElementAdvectionDestroy(PetscInt, PetscReal *, PetscReal *, PetscReal ***); 124916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreElementMassCreate(PetscInt, PetscReal *, PetscReal *, PetscReal ***); 125916e780bShannah_mairs PETSC_EXTERN PetscErrorCode PetscGaussLobattoLegendreElementMassDestroy(PetscInt, PetscReal *, PetscReal *, PetscReal ***); 126916e780bShannah_mairs 1271a989b97SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVApply(PetscInt, PetscInt, const PetscReal *, const PetscReal *, PetscReal *); 1281a989b97SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVWedge(PetscInt, PetscInt, PetscInt, const PetscReal *, const PetscReal *, PetscReal *); 1291a989b97SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVWedgeMatrix(PetscInt, PetscInt, PetscInt, const PetscReal *, PetscReal *); 1301a989b97SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVPullback(PetscInt, PetscInt, const PetscReal *, PetscInt, const PetscReal *, PetscReal *); 1311a989b97SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVPullbackMatrix(PetscInt, PetscInt, const PetscReal *, PetscInt, PetscReal *); 1321a989b97SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVInterior(PetscInt, PetscInt, const PetscReal *, const PetscReal *, PetscReal *); 1331a989b97SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVInteriorMatrix(PetscInt, PetscInt, const PetscReal *, PetscReal *); 134dda711d0SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVInteriorPattern(PetscInt, PetscInt, PetscInt (*)[3]); 1351a989b97SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTAltVStar(PetscInt, PetscInt, PetscInt, const PetscReal *, PetscReal *); 1361a989b97SToby Isaac 137d4afb720SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTBaryToIndex(PetscInt,PetscInt,const PetscInt[],PetscInt*); 138d4afb720SToby Isaac PETSC_EXTERN PetscErrorCode PetscDTIndexToBary(PetscInt,PetscInt,PetscInt,PetscInt[]); 139fbdc3dfeSToby Isaac PETSC_EXTERN PetscErrorCode PetscDTGradedOrderToIndex(PetscInt,const PetscInt[],PetscInt*); 140fbdc3dfeSToby Isaac PETSC_EXTERN PetscErrorCode PetscDTIndexToGradedOrder(PetscInt,PetscInt,PetscInt[]); 141d4afb720SToby Isaac 142fad4db65SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 143fad4db65SToby Isaac #define PETSC_FACTORIAL_MAX 20 144fad4db65SToby Isaac #define PETSC_BINOMIAL_MAX 61 145fad4db65SToby Isaac #else 146fad4db65SToby Isaac #define PETSC_FACTORIAL_MAX 12 147fad4db65SToby Isaac #define PETSC_BINOMIAL_MAX 29 148fad4db65SToby Isaac #endif 149fad4db65SToby Isaac 150fad4db65SToby Isaac /*MC 151fad4db65SToby Isaac PetscDTFactorial - Approximate n! as a real number 152fad4db65SToby Isaac 1534165533cSJose E. Roman Input Parameter: 154fad4db65SToby Isaac . n - a non-negative integer 155fad4db65SToby Isaac 1564165533cSJose E. Roman Output Parameter: 157fad4db65SToby Isaac . factorial - n! 158fad4db65SToby Isaac 159fad4db65SToby Isaac Level: beginner 160fad4db65SToby Isaac M*/ 1619fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTFactorial(PetscInt n, PetscReal *factorial) 162fad4db65SToby Isaac { 163fad4db65SToby Isaac PetscReal f = 1.0; 164fad4db65SToby Isaac 165fad4db65SToby Isaac PetscFunctionBegin; 166e2ab39ccSLisandro Dalcin *factorial = -1.0; 16763a3b9bcSJacob Faibussowitsch PetscCheck(n >= 0,PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Factorial called with negative number %" PetscInt_FMT, n); 1685f80ce2aSJacob Faibussowitsch for (PetscInt i = 1; i < n+1; ++i) f *= (PetscReal)i; 169fad4db65SToby Isaac *factorial = f; 170fad4db65SToby Isaac PetscFunctionReturn(0); 171fad4db65SToby Isaac } 172fad4db65SToby Isaac 173fad4db65SToby Isaac /*MC 174fad4db65SToby Isaac PetscDTFactorialInt - Compute n! as an integer 175fad4db65SToby Isaac 1764165533cSJose E. Roman Input Parameter: 177fad4db65SToby Isaac . n - a non-negative integer 178fad4db65SToby Isaac 1794165533cSJose E. Roman Output Parameter: 180fad4db65SToby Isaac . factorial - n! 181fad4db65SToby Isaac 182fad4db65SToby Isaac Level: beginner 183fad4db65SToby Isaac 184fad4db65SToby Isaac Note: this is limited to n such that n! can be represented by PetscInt, which is 12 if PetscInt is a signed 32-bit integer and 20 if PetscInt is a signed 64-bit integer. 185fad4db65SToby Isaac M*/ 1869fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTFactorialInt(PetscInt n, PetscInt *factorial) 187fad4db65SToby Isaac { 188fad4db65SToby Isaac PetscInt facLookup[13] = {1, 1, 2, 6, 24, 120, 720, 5040, 40320, 362880, 3628800, 39916800, 479001600}; 189fad4db65SToby Isaac 19028222859SToby Isaac PetscFunctionBegin; 19128222859SToby Isaac *factorial = -1; 19263a3b9bcSJacob Faibussowitsch PetscCheck(n >= 0 && n <= PETSC_FACTORIAL_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Number of elements %" PetscInt_FMT " is not in supported range [0,%d]",n,PETSC_FACTORIAL_MAX); 193fad4db65SToby Isaac if (n <= 12) { 194fad4db65SToby Isaac *factorial = facLookup[n]; 195fad4db65SToby Isaac } else { 196fad4db65SToby Isaac PetscInt f = facLookup[12]; 197fad4db65SToby Isaac PetscInt i; 198fad4db65SToby Isaac 199fad4db65SToby Isaac for (i = 13; i < n+1; ++i) f *= i; 200fad4db65SToby Isaac *factorial = f; 201fad4db65SToby Isaac } 202fad4db65SToby Isaac PetscFunctionReturn(0); 203fad4db65SToby Isaac } 204fad4db65SToby Isaac 205fad4db65SToby Isaac /*MC 206fad4db65SToby Isaac PetscDTBinomial - Approximate the binomial coefficient "n choose k" 207fad4db65SToby Isaac 2084165533cSJose E. Roman Input Parameters: 209fad4db65SToby Isaac + n - a non-negative integer 210fad4db65SToby Isaac - k - an integer between 0 and n, inclusive 211fad4db65SToby Isaac 2124165533cSJose E. Roman Output Parameter: 213fad4db65SToby Isaac . binomial - approximation of the binomial coefficient n choose k 214fad4db65SToby Isaac 215fad4db65SToby Isaac Level: beginner 216fad4db65SToby Isaac M*/ 2179fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTBinomial(PetscInt n, PetscInt k, PetscReal *binomial) 2181a989b97SToby Isaac { 2191a989b97SToby Isaac PetscFunctionBeginHot; 220e2ab39ccSLisandro Dalcin *binomial = -1.0; 22163a3b9bcSJacob Faibussowitsch PetscCheck(n >= 0 && k >= 0 && k <= n,PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Binomial arguments (%" PetscInt_FMT " %" PetscInt_FMT ") must be non-negative, k <= n", n, k); 2221a989b97SToby Isaac if (n <= 3) { 2231a989b97SToby Isaac PetscInt binomLookup[4][4] = {{1, 0, 0, 0}, {1, 1, 0, 0}, {1, 2, 1, 0}, {1, 3, 3, 1}}; 2241a989b97SToby Isaac 225e2ab39ccSLisandro Dalcin *binomial = (PetscReal)binomLookup[n][k]; 2261a989b97SToby Isaac } else { 227e2ab39ccSLisandro Dalcin PetscReal binom = 1.0; 2281a989b97SToby Isaac 2291a989b97SToby Isaac k = PetscMin(k, n - k); 2305f80ce2aSJacob Faibussowitsch for (PetscInt i = 0; i < k; i++) binom = (binom * (PetscReal)(n - i)) / (PetscReal)(i + 1); 2311a989b97SToby Isaac *binomial = binom; 2321a989b97SToby Isaac } 2331a989b97SToby Isaac PetscFunctionReturn(0); 2341a989b97SToby Isaac } 2351a989b97SToby Isaac 236fad4db65SToby Isaac /*MC 237fad4db65SToby Isaac PetscDTBinomialInt - Compute the binomial coefficient "n choose k" 238fad4db65SToby Isaac 23997bb3fdcSJose E. Roman Input Parameters: 240fad4db65SToby Isaac + n - a non-negative integer 241fad4db65SToby Isaac - k - an integer between 0 and n, inclusive 242fad4db65SToby Isaac 24397bb3fdcSJose E. Roman Output Parameter: 244fad4db65SToby Isaac . binomial - the binomial coefficient n choose k 245fad4db65SToby Isaac 246fad4db65SToby Isaac Note: this is limited by integers that can be represented by PetscInt 247fad4db65SToby Isaac 248fad4db65SToby Isaac Level: beginner 249fad4db65SToby Isaac M*/ 2509fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTBinomialInt(PetscInt n, PetscInt k, PetscInt *binomial) 251fad4db65SToby Isaac { 25228222859SToby Isaac PetscInt bin; 25328222859SToby Isaac 25428222859SToby Isaac PetscFunctionBegin; 25528222859SToby Isaac *binomial = -1; 25663a3b9bcSJacob Faibussowitsch PetscCheck(n >= 0 && k >= 0 && k <= n,PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Binomial arguments (%" PetscInt_FMT " %" PetscInt_FMT ") must be non-negative, k <= n", n, k); 25763a3b9bcSJacob Faibussowitsch PetscCheck(n <= PETSC_BINOMIAL_MAX,PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Binomial elements %" PetscInt_FMT " is larger than max for PetscInt, %d", n, PETSC_BINOMIAL_MAX); 258fad4db65SToby Isaac if (n <= 3) { 259fad4db65SToby Isaac PetscInt binomLookup[4][4] = {{1, 0, 0, 0}, {1, 1, 0, 0}, {1, 2, 1, 0}, {1, 3, 3, 1}}; 260fad4db65SToby Isaac 26128222859SToby Isaac bin = binomLookup[n][k]; 262fad4db65SToby Isaac } else { 263fad4db65SToby Isaac PetscInt binom = 1; 264fad4db65SToby Isaac 265fad4db65SToby Isaac k = PetscMin(k, n - k); 2665f80ce2aSJacob Faibussowitsch for (PetscInt i = 0; i < k; i++) binom = (binom * (n - i)) / (i + 1); 26728222859SToby Isaac bin = binom; 268fad4db65SToby Isaac } 26928222859SToby Isaac *binomial = bin; 270fad4db65SToby Isaac PetscFunctionReturn(0); 271fad4db65SToby Isaac } 272fad4db65SToby Isaac 273fad4db65SToby Isaac /*MC 274fad4db65SToby Isaac PetscDTEnumPerm - Get a permutation of n integers from its encoding into the integers [0, n!) as a sequence of swaps. 275fad4db65SToby Isaac 276fad4db65SToby Isaac A permutation can be described by the operations that convert the lists [0, 1, ..., n-1] into the permutation, 277fad4db65SToby Isaac by a sequence of swaps, where the ith step swaps whatever number is in ith position with a number that is in 27828222859SToby Isaac some position j >= i. This swap is encoded as the difference (j - i). The difference d_i at step i is less than 27928222859SToby Isaac (n - i). This sequence of n-1 differences [d_0, ..., d_{n-2}] is encoded as the number 280fad4db65SToby Isaac (n-1)! * d_0 + (n-2)! * d_1 + ... + 1! * d_{n-2}. 281fad4db65SToby Isaac 2824165533cSJose E. Roman Input Parameters: 283fad4db65SToby Isaac + n - a non-negative integer (see note about limits below) 2848cd1e013SToby Isaac - k - an integer in [0, n!) 285fad4db65SToby Isaac 2864165533cSJose E. Roman Output Parameters: 287fad4db65SToby Isaac + perm - the permuted list of the integers [0, ..., n-1] 2888cd1e013SToby Isaac - isOdd - if not NULL, returns wether the permutation used an even or odd number of swaps. 289fad4db65SToby Isaac 290fad4db65SToby Isaac Note: this is limited to n such that n! can be represented by PetscInt, which is 12 if PetscInt is a signed 32-bit integer and 20 if PetscInt is a signed 64-bit integer. 291fad4db65SToby Isaac 292fad4db65SToby Isaac Level: beginner 293fad4db65SToby Isaac M*/ 2949fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTEnumPerm(PetscInt n, PetscInt k, PetscInt *perm, PetscBool *isOdd) 2951a989b97SToby Isaac { 2961a989b97SToby Isaac PetscInt odd = 0; 2971a989b97SToby Isaac PetscInt i; 298fad4db65SToby Isaac PetscInt work[PETSC_FACTORIAL_MAX]; 299fad4db65SToby Isaac PetscInt *w; 3001a989b97SToby Isaac 30128222859SToby Isaac PetscFunctionBegin; 30228222859SToby Isaac if (isOdd) *isOdd = PETSC_FALSE; 30363a3b9bcSJacob Faibussowitsch PetscCheck(n >= 0 && n <= PETSC_FACTORIAL_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Number of elements %" PetscInt_FMT " is not in supported range [0,%d]",n,PETSC_FACTORIAL_MAX); 304fad4db65SToby Isaac w = &work[n - 2]; 3051a989b97SToby Isaac for (i = 2; i <= n; i++) { 3061a989b97SToby Isaac *(w--) = k % i; 3071a989b97SToby Isaac k /= i; 3081a989b97SToby Isaac } 3091a989b97SToby Isaac for (i = 0; i < n; i++) perm[i] = i; 3101a989b97SToby Isaac for (i = 0; i < n - 1; i++) { 3111a989b97SToby Isaac PetscInt s = work[i]; 3121a989b97SToby Isaac PetscInt swap = perm[i]; 3131a989b97SToby Isaac 3141a989b97SToby Isaac perm[i] = perm[i + s]; 3151a989b97SToby Isaac perm[i + s] = swap; 3161a989b97SToby Isaac odd ^= (!!s); 3171a989b97SToby Isaac } 3181a989b97SToby Isaac if (isOdd) *isOdd = odd ? PETSC_TRUE : PETSC_FALSE; 3191a989b97SToby Isaac PetscFunctionReturn(0); 3201a989b97SToby Isaac } 3211a989b97SToby Isaac 322fad4db65SToby Isaac /*MC 3238cd1e013SToby Isaac PetscDTPermIndex - Encode a permutation of n into an integer in [0, n!). This inverts PetscDTEnumPerm. 3248cd1e013SToby Isaac 3254165533cSJose E. Roman Input Parameters: 3268cd1e013SToby Isaac + n - a non-negative integer (see note about limits below) 3278cd1e013SToby Isaac - perm - the permuted list of the integers [0, ..., n-1] 3288cd1e013SToby Isaac 3294165533cSJose E. Roman Output Parameters: 3308cd1e013SToby Isaac + k - an integer in [0, n!) 331f0fc11ceSJed Brown - isOdd - if not NULL, returns wether the permutation used an even or odd number of swaps. 3328cd1e013SToby Isaac 3338cd1e013SToby Isaac Note: this is limited to n such that n! can be represented by PetscInt, which is 12 if PetscInt is a signed 32-bit integer and 20 if PetscInt is a signed 64-bit integer. 3348cd1e013SToby Isaac 3358cd1e013SToby Isaac Level: beginner 3368cd1e013SToby Isaac M*/ 3379fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTPermIndex(PetscInt n, const PetscInt *perm, PetscInt *k, PetscBool *isOdd) 3388cd1e013SToby Isaac { 3398cd1e013SToby Isaac PetscInt odd = 0; 3408cd1e013SToby Isaac PetscInt i, idx; 3418cd1e013SToby Isaac PetscInt work[PETSC_FACTORIAL_MAX]; 3428cd1e013SToby Isaac PetscInt iwork[PETSC_FACTORIAL_MAX]; 3438cd1e013SToby Isaac 3448cd1e013SToby Isaac PetscFunctionBeginHot; 34528222859SToby Isaac *k = -1; 34628222859SToby Isaac if (isOdd) *isOdd = PETSC_FALSE; 34763a3b9bcSJacob Faibussowitsch PetscCheck(n >= 0 && n <= PETSC_FACTORIAL_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Number of elements %" PetscInt_FMT " is not in supported range [0,%d]",n,PETSC_FACTORIAL_MAX); 3488cd1e013SToby Isaac for (i = 0; i < n; i++) work[i] = i; /* partial permutation */ 3498cd1e013SToby Isaac for (i = 0; i < n; i++) iwork[i] = i; /* partial permutation inverse */ 3508cd1e013SToby Isaac for (idx = 0, i = 0; i < n - 1; i++) { 3518cd1e013SToby Isaac PetscInt j = perm[i]; 3528cd1e013SToby Isaac PetscInt icur = work[i]; 3538cd1e013SToby Isaac PetscInt jloc = iwork[j]; 3548cd1e013SToby Isaac PetscInt diff = jloc - i; 3558cd1e013SToby Isaac 3568cd1e013SToby Isaac idx = idx * (n - i) + diff; 3578cd1e013SToby Isaac /* swap (i, jloc) */ 3588cd1e013SToby Isaac work[i] = j; 3598cd1e013SToby Isaac work[jloc] = icur; 3608cd1e013SToby Isaac iwork[j] = i; 3618cd1e013SToby Isaac iwork[icur] = jloc; 3628cd1e013SToby Isaac odd ^= (!!diff); 3638cd1e013SToby Isaac } 3648cd1e013SToby Isaac *k = idx; 3658cd1e013SToby Isaac if (isOdd) *isOdd = odd ? PETSC_TRUE : PETSC_FALSE; 3668cd1e013SToby Isaac PetscFunctionReturn(0); 3678cd1e013SToby Isaac } 3688cd1e013SToby Isaac 3698cd1e013SToby Isaac /*MC 370fad4db65SToby Isaac PetscDTEnumSubset - Get an ordered subset of the integers [0, ..., n - 1] from its encoding as an integers in [0, n choose k). 371fad4db65SToby Isaac The encoding is in lexicographic order. 372fad4db65SToby Isaac 3734165533cSJose E. Roman Input Parameters: 374fad4db65SToby Isaac + n - a non-negative integer (see note about limits below) 375fad4db65SToby Isaac . k - an integer in [0, n] 376fad4db65SToby Isaac - j - an index in [0, n choose k) 377fad4db65SToby Isaac 3784165533cSJose E. Roman Output Parameter: 379fad4db65SToby Isaac . subset - the jth subset of size k of the integers [0, ..., n - 1] 380fad4db65SToby Isaac 381fad4db65SToby Isaac Note: this is limited by arguments such that n choose k can be represented by PetscInt 382fad4db65SToby Isaac 383fad4db65SToby Isaac Level: beginner 384fad4db65SToby Isaac 385db781477SPatrick Sanan .seealso: `PetscDTSubsetIndex()` 386fad4db65SToby Isaac M*/ 3879fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTEnumSubset(PetscInt n, PetscInt k, PetscInt j, PetscInt *subset) 3881a989b97SToby Isaac { 3895f80ce2aSJacob Faibussowitsch PetscInt Nk; 3901a989b97SToby Isaac 3911a989b97SToby Isaac PetscFunctionBeginHot; 3929566063dSJacob Faibussowitsch PetscCall(PetscDTBinomialInt(n, k, &Nk)); 3935f80ce2aSJacob Faibussowitsch for (PetscInt i = 0, l = 0; i < n && l < k; i++) { 3941a989b97SToby Isaac PetscInt Nminuskminus = (Nk * (k - l)) / (n - i); 3951a989b97SToby Isaac PetscInt Nminusk = Nk - Nminuskminus; 3961a989b97SToby Isaac 3971a989b97SToby Isaac if (j < Nminuskminus) { 3981a989b97SToby Isaac subset[l++] = i; 3991a989b97SToby Isaac Nk = Nminuskminus; 4001a989b97SToby Isaac } else { 4011a989b97SToby Isaac j -= Nminuskminus; 4021a989b97SToby Isaac Nk = Nminusk; 4031a989b97SToby Isaac } 4041a989b97SToby Isaac } 4051a989b97SToby Isaac PetscFunctionReturn(0); 4061a989b97SToby Isaac } 4071a989b97SToby Isaac 408fad4db65SToby Isaac /*MC 409fad4db65SToby Isaac PetscDTSubsetIndex - Convert an ordered subset of k integers from the set [0, ..., n - 1] to its encoding as an integers in [0, n choose k) in lexicographic order. This is the inverse of PetscDTEnumSubset. 410fad4db65SToby Isaac 4114165533cSJose E. Roman Input Parameters: 412fad4db65SToby Isaac + n - a non-negative integer (see note about limits below) 413fad4db65SToby Isaac . k - an integer in [0, n] 414fad4db65SToby Isaac - subset - an ordered subset of the integers [0, ..., n - 1] 415fad4db65SToby Isaac 4164165533cSJose E. Roman Output Parameter: 417fad4db65SToby Isaac . index - the rank of the subset in lexicographic order 418fad4db65SToby Isaac 419fad4db65SToby Isaac Note: this is limited by arguments such that n choose k can be represented by PetscInt 420fad4db65SToby Isaac 421fad4db65SToby Isaac Level: beginner 422fad4db65SToby Isaac 423db781477SPatrick Sanan .seealso: `PetscDTEnumSubset()` 424fad4db65SToby Isaac M*/ 4259fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTSubsetIndex(PetscInt n, PetscInt k, const PetscInt *subset, PetscInt *index) 4261a989b97SToby Isaac { 4275f80ce2aSJacob Faibussowitsch PetscInt j = 0, Nk; 4281a989b97SToby Isaac 42928222859SToby Isaac PetscFunctionBegin; 43028222859SToby Isaac *index = -1; 4319566063dSJacob Faibussowitsch PetscCall(PetscDTBinomialInt(n, k, &Nk)); 4325f80ce2aSJacob Faibussowitsch for (PetscInt i = 0, l = 0; i < n && l < k; i++) { 4331a989b97SToby Isaac PetscInt Nminuskminus = (Nk * (k - l)) / (n - i); 4341a989b97SToby Isaac PetscInt Nminusk = Nk - Nminuskminus; 4351a989b97SToby Isaac 4361a989b97SToby Isaac if (subset[l] == i) { 4371a989b97SToby Isaac l++; 4381a989b97SToby Isaac Nk = Nminuskminus; 4391a989b97SToby Isaac } else { 4401a989b97SToby Isaac j += Nminuskminus; 4411a989b97SToby Isaac Nk = Nminusk; 4421a989b97SToby Isaac } 4431a989b97SToby Isaac } 4441a989b97SToby Isaac *index = j; 4451a989b97SToby Isaac PetscFunctionReturn(0); 4461a989b97SToby Isaac } 4471a989b97SToby Isaac 448fad4db65SToby Isaac /*MC 44928222859SToby Isaac PetscDTEnumSubset - Split the integers [0, ..., n - 1] into two complementary ordered subsets, the first subset of size k and being the jth subset of that size in lexicographic order. 450fad4db65SToby Isaac 4514165533cSJose E. Roman Input Parameters: 452fad4db65SToby Isaac + n - a non-negative integer (see note about limits below) 453fad4db65SToby Isaac . k - an integer in [0, n] 454fad4db65SToby Isaac - j - an index in [0, n choose k) 455fad4db65SToby Isaac 4564165533cSJose E. Roman Output Parameters: 457fad4db65SToby Isaac + perm - the jth subset of size k of the integers [0, ..., n - 1], followed by its complementary set. 45828222859SToby Isaac - isOdd - if not NULL, return whether perm is an even or odd permutation. 459fad4db65SToby Isaac 460fad4db65SToby Isaac Note: this is limited by arguments such that n choose k can be represented by PetscInt 461fad4db65SToby Isaac 462fad4db65SToby Isaac Level: beginner 463fad4db65SToby Isaac 464db781477SPatrick Sanan .seealso: `PetscDTEnumSubset()`, `PetscDTSubsetIndex()` 465fad4db65SToby Isaac M*/ 4669fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscDTEnumSplit(PetscInt n, PetscInt k, PetscInt j, PetscInt *perm, PetscBool *isOdd) 4671a989b97SToby Isaac { 4685f80ce2aSJacob Faibussowitsch PetscInt i, l, m, Nk, odd = 0; 4695f80ce2aSJacob Faibussowitsch PetscInt *subcomp = perm+k; 4701a989b97SToby Isaac 47128222859SToby Isaac PetscFunctionBegin; 47228222859SToby Isaac if (isOdd) *isOdd = PETSC_FALSE; 4739566063dSJacob Faibussowitsch PetscCall(PetscDTBinomialInt(n, k, &Nk)); 4741a989b97SToby Isaac for (i = 0, l = 0, m = 0; i < n && l < k; i++) { 4751a989b97SToby Isaac PetscInt Nminuskminus = (Nk * (k - l)) / (n - i); 4761a989b97SToby Isaac PetscInt Nminusk = Nk - Nminuskminus; 4771a989b97SToby Isaac 4781a989b97SToby Isaac if (j < Nminuskminus) { 479fad4db65SToby Isaac perm[l++] = i; 4801a989b97SToby Isaac Nk = Nminuskminus; 4811a989b97SToby Isaac } else { 4821a989b97SToby Isaac subcomp[m++] = i; 4831a989b97SToby Isaac j -= Nminuskminus; 4841a989b97SToby Isaac odd ^= ((k - l) & 1); 4851a989b97SToby Isaac Nk = Nminusk; 4861a989b97SToby Isaac } 4871a989b97SToby Isaac } 4885f80ce2aSJacob Faibussowitsch for (; i < n; i++) subcomp[m++] = i; 4891a989b97SToby Isaac if (isOdd) *isOdd = odd ? PETSC_TRUE : PETSC_FALSE; 4901a989b97SToby Isaac PetscFunctionReturn(0); 4911a989b97SToby Isaac } 4921a989b97SToby Isaac 493ef0bb6c7SMatthew G. Knepley struct _p_PetscTabulation { 494a5b23f4aSJose E. Roman PetscInt K; /* Indicates a k-jet, namely tabulated derivatives up to order k */ 49519815104SMartin Diehl PetscInt Nr; /* The number of tabulation replicas (often 1) */ 496ef0bb6c7SMatthew G. Knepley PetscInt Np; /* The number of tabulation points in a replica */ 497ef0bb6c7SMatthew G. Knepley PetscInt Nb; /* The number of functions tabulated */ 498ef0bb6c7SMatthew G. Knepley PetscInt Nc; /* The number of function components */ 499ef0bb6c7SMatthew G. Knepley PetscInt cdim; /* The coordinate dimension */ 500ef0bb6c7SMatthew G. Knepley PetscReal **T; /* The tabulation T[K] of functions and their derivatives 501ef0bb6c7SMatthew G. Knepley T[0] = B[Nr*Np][Nb][Nc]: The basis function values at quadrature points 502ef0bb6c7SMatthew G. Knepley T[1] = D[Nr*Np][Nb][Nc][cdim]: The basis function derivatives at quadrature points 503ef0bb6c7SMatthew G. Knepley T[2] = H[Nr*Np][Nb][Nc][cdim][cdim]: The basis function second derivatives at quadrature points */ 504ef0bb6c7SMatthew G. Knepley }; 505ef0bb6c7SMatthew G. Knepley typedef struct _p_PetscTabulation *PetscTabulation; 506ef0bb6c7SMatthew G. Knepley 507d6685f55SMatthew G. Knepley typedef PetscErrorCode (*PetscProbFunc)(const PetscReal[], const PetscReal[], PetscReal[]); 508d6685f55SMatthew G. Knepley 509d6685f55SMatthew G. Knepley typedef enum {DTPROB_DENSITY_CONSTANT, DTPROB_DENSITY_GAUSSIAN, DTPROB_DENSITY_MAXWELL_BOLTZMANN, DTPROB_NUM_DENSITY} DTProbDensityType; 510d6685f55SMatthew G. Knepley PETSC_EXTERN const char * const DTProbDensityTypes[]; 511d6685f55SMatthew G. Knepley 512d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFMaxwellBoltzmann1D(const PetscReal[], const PetscReal[], PetscReal[]); 513d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscCDFMaxwellBoltzmann1D(const PetscReal[], const PetscReal[], PetscReal[]); 514d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFMaxwellBoltzmann2D(const PetscReal[], const PetscReal[], PetscReal[]); 515d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscCDFMaxwellBoltzmann2D(const PetscReal[], const PetscReal[], PetscReal[]); 516d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFMaxwellBoltzmann3D(const PetscReal[], const PetscReal[], PetscReal[]); 517d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscCDFMaxwellBoltzmann3D(const PetscReal[], const PetscReal[], PetscReal[]); 518d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFGaussian1D(const PetscReal[], const PetscReal[], PetscReal[]); 519d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscCDFGaussian1D(const PetscReal[], const PetscReal[], PetscReal[]); 520d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFSampleGaussian1D(const PetscReal[], const PetscReal[], PetscReal[]); 521d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFGaussian2D(const PetscReal[], const PetscReal[], PetscReal[]); 522d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFSampleGaussian2D(const PetscReal[], const PetscReal[], PetscReal[]); 523ea1b28ebSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFGaussian3D(const PetscReal[], const PetscReal[], PetscReal[]); 524ea1b28ebSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFSampleGaussian3D(const PetscReal[], const PetscReal[], PetscReal[]); 525d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFConstant1D(const PetscReal[], const PetscReal[], PetscReal[]); 526d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscCDFConstant1D(const PetscReal[], const PetscReal[], PetscReal[]); 527d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFSampleConstant1D(const PetscReal[], const PetscReal[], PetscReal[]); 528ea1b28ebSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFConstant2D(const PetscReal[], const PetscReal[], PetscReal[]); 529ea1b28ebSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscCDFConstant2D(const PetscReal[], const PetscReal[], PetscReal[]); 530ea1b28ebSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFSampleConstant2D(const PetscReal[], const PetscReal[], PetscReal[]); 531ea1b28ebSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFConstant3D(const PetscReal[], const PetscReal[], PetscReal[]); 532ea1b28ebSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscCDFConstant3D(const PetscReal[], const PetscReal[], PetscReal[]); 533ea1b28ebSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscPDFSampleConstant3D(const PetscReal[], const PetscReal[], PetscReal[]); 534d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscProbCreateFromOptions(PetscInt, const char[], const char[], PetscProbFunc *, PetscProbFunc *, PetscProbFunc *); 535d6685f55SMatthew G. Knepley 536d6685f55SMatthew G. Knepley #include <petscvec.h> 537d6685f55SMatthew G. Knepley 538d6685f55SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscProbComputeKSStatistic(Vec, PetscProbFunc, PetscReal *); 539d6685f55SMatthew G. Knepley 54037045ce4SJed Brown #endif 541