1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 73ca90d2dSJacob Faibussowitsch 8d382aafbSBarry Smith /* ========================================================================== */ 9d382aafbSBarry Smith /* 10d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 111c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 121c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 131c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 141cc8b206SBarry Smith directory as the other PETSc include files. 15d382aafbSBarry Smith */ 162c8e378dSBarry Smith #include <petscconf.h> 171c77a0c5SBarry Smith #include <petscconf_poison.h> 182c8e378dSBarry Smith #include <petscfix.h> 19bde483f2SJacob Faibussowitsch #include <petscmacros.h> 2033bb201bSJacob Faibussowitsch 21ac09b921SBarry Smith /* SUBMANSEC = Sys */ 22ac09b921SBarry Smith 2373fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2473fca5a0SBarry Smith /* 2573fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2673fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2773fca5a0SBarry Smith */ 28216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2973fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 3073fca5a0SBarry Smith #endif 31216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3273fca5a0SBarry Smith #define _BSD_SOURCE 3373fca5a0SBarry Smith #endif 3407f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3507f00807SSatish Balay #define _DEFAULT_SOURCE 3607f00807SSatish Balay #endif 37ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 38ea0fecefSShri Abhyankar #define _GNU_SOURCE 39ea0fecefSShri Abhyankar #endif 4073fca5a0SBarry Smith #endif 4173fca5a0SBarry Smith 42df4397b0SStefano Zampini #include <petscsystypes.h> 43df4397b0SStefano Zampini 44d382aafbSBarry Smith /* ========================================================================== */ 45d382aafbSBarry Smith 46d382aafbSBarry Smith /* 47d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 48d382aafbSBarry Smith 49d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 50d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 51d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 52d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 53d382aafbSBarry Smith mpicxx.h directly in their code 54d382aafbSBarry Smith */ 55fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 56d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 57fa9e63e2SJed Brown #endif 58fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 59d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 60fa9e63e2SJed Brown #endif 61e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 62e771154cSJed Brown #include <petsc/mpiuni/mpi.h> 63e771154cSJed Brown #else 642c8e378dSBarry Smith #include <mpi.h> 65e771154cSJed Brown #endif 6665013866SBarry Smith 67d382aafbSBarry Smith /* 68a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 69a7886beaSBarry Smith This usually happens because 70a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 71a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 72a7886beaSBarry Smith */ 73a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 74c9b973beSBarry Smith #if !defined(MPIUNI_H) 75a7886beaSBarry Smith #error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 76a7886beaSBarry Smith #endif 7741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 7841f4af4cSSatish Balay #if !defined(I_MPI_NUMVERSION) 7941f4af4cSSatish Balay #error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 8041f4af4cSSatish Balay #elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 8141f4af4cSSatish Balay #error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 8241f4af4cSSatish Balay #endif 8341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 8441f4af4cSSatish Balay #if !defined(MVAPICH2_NUMVERSION) 8541f4af4cSSatish Balay #error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 8641f4af4cSSatish Balay #elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 8741f4af4cSSatish Balay #error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 8841f4af4cSSatish Balay #endif 89a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 9041f4af4cSSatish Balay #if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 91a7886beaSBarry Smith #error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 921c284764SMin RK #elif (MPICH_NUMVERSION / 100000000 != PETSC_HAVE_MPICH_NUMVERSION / 100000000) || (MPICH_NUMVERSION / 100000 < PETSC_HAVE_MPICH_NUMVERSION / 100000) || (MPICH_NUMVERSION / 100000 == PETSC_HAVE_MPICH_NUMVERSION / 100000 && MPICH_NUMVERSION % 100000 / 1000 < PETSC_HAVE_MPICH_NUMVERSION % 100000 / 1000) 93a7886beaSBarry Smith #error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 94a7886beaSBarry Smith #endif 95a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 96a7886beaSBarry Smith #if !defined(OMPI_MAJOR_VERSION) 97a7886beaSBarry Smith #error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 981c284764SMin RK #elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION < PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_MINOR_VERSION == PETSC_HAVE_OMPI_MINOR_VERSION && OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 99c3ac57cfSSatish Balay #error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 100a7886beaSBarry Smith #endif 101c93fae50SJacob Faibussowitsch #define PETSC_MPI_COMM_FMT "p" 102c93fae50SJacob Faibussowitsch #define PETSC_MPI_WIN_FMT "p" 103d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 104d97fd468SStefano Zampini #if !defined(MSMPI_VER) 105d97fd468SStefano Zampini #error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 106d97fd468SStefano Zampini #elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 107d97fd468SStefano Zampini #error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 108d97fd468SStefano Zampini #endif 109d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 110d97fd468SStefano Zampini #error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 111a7886beaSBarry Smith #endif 112a7886beaSBarry Smith 113c93fae50SJacob Faibussowitsch /* Format specifier for printing MPI_Comm (most implementations use 'int' as type) */ 114c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_COMM_FMT) 115c93fae50SJacob Faibussowitsch #define PETSC_MPI_COMM_FMT "d" 116c93fae50SJacob Faibussowitsch #endif 117c93fae50SJacob Faibussowitsch 118c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_WIN_FMT) 119c93fae50SJacob Faibussowitsch #define PETSC_MPI_WIN_FMT "d" 120c93fae50SJacob Faibussowitsch #endif 121c93fae50SJacob Faibussowitsch 122a7886beaSBarry Smith /* 1232981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 124d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 125d382aafbSBarry Smith */ 126d382aafbSBarry Smith #include <stdio.h> 127d382aafbSBarry Smith 128d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 129d382aafbSBarry Smith #if !defined(MPIAPI) 130d382aafbSBarry Smith #define MPIAPI 131d382aafbSBarry Smith #endif 132d382aafbSBarry Smith 1331cc8b206SBarry Smith /* 1341cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1351cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1361cc8b206SBarry Smith does not match the actual type of the argument being passed in 1371cc8b206SBarry Smith */ 138c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 139894dd566SJed Brown #if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 140894dd566SJed Brown #define PetscAttrMPIPointerWithType(bufno, typeno) __attribute__((pointer_with_type_tag(MPI, bufno, typeno))) 1418ad47952SJed Brown #define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI, type))) 1428ad47952SJed Brown #define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI, type, layout_compatible))) 143894dd566SJed Brown #endif 144894dd566SJed Brown #endif 145894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 146894dd566SJed Brown #define PetscAttrMPIPointerWithType(bufno, typeno) 1478ad47952SJed Brown #define PetscAttrMPITypeTag(type) 1488ad47952SJed Brown #define PetscAttrMPITypeTagLayoutCompatible(type) 149894dd566SJed Brown #endif 150b3506946SBarry Smith 1515a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 152df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 153e28ce29aSPatrick Sanan 154e28ce29aSPatrick Sanan /*MC 15587497f52SBarry Smith MPIU_INT - Portable MPI datatype corresponding to `PetscInt` independent of the precision of `PetscInt` 156e28ce29aSPatrick Sanan 157e28ce29aSPatrick Sanan Notes: 15887497f52SBarry Smith In MPI calls that require an MPI datatype that matches a `PetscInt` or array of `PetscInt` values, pass this value. 159e28ce29aSPatrick Sanan 160e28ce29aSPatrick Sanan Level: beginner 161e28ce29aSPatrick Sanan 162db781477SPatrick Sanan .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 163e28ce29aSPatrick Sanan M*/ 164e28ce29aSPatrick Sanan 1657cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 166b7b8f77aSBarry Smith 167d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 168bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64 169a05e1a72SSatish Balay #define PetscInt_FMT PetscInt64_FMT 170d382aafbSBarry Smith #else 171d382aafbSBarry Smith #define MPIU_INT MPI_INT 172a05e1a72SSatish Balay #define PetscInt_FMT "d" 173d382aafbSBarry Smith #endif 174d382aafbSBarry Smith 175503cfb0cSBarry Smith /* 176503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 177503cfb0cSBarry Smith */ 178e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 179d382aafbSBarry Smith 180d382aafbSBarry Smith /* 181d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 182d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 183d382aafbSBarry Smith */ 184014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDOUT; 185d382aafbSBarry Smith 186d382aafbSBarry Smith /* 187d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 188d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 189d382aafbSBarry Smith */ 190014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDERR; 191d382aafbSBarry Smith 192c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 193c8b9133aSSatish Balay 1945c993f7fSStefano Zampini #if defined(__NEC__) 1955c993f7fSStefano Zampini #define PetscPragmaSIMD _Pragma("_NEC ivdep") 1965c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 197c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("vector") 1981dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 199c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("GCC ivdep") 200e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 201e5518150SSatish Balay #if defined(_MSC_VER) 202160a5775SAli Reza Khaz'ali #define PetscPragmaSIMD __pragma(omp simd) 203e5518150SSatish Balay #else 204e5518150SSatish Balay #define PetscPragmaSIMD _Pragma("omp simd") 205e5518150SSatish Balay #endif 206c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 207c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("_CRI ivdep") 208c8b9133aSSatish Balay #else 209c8b9133aSSatish Balay #define PetscPragmaSIMD 210c8b9133aSSatish Balay #endif 211c8b9133aSSatish Balay 212d382aafbSBarry Smith /* 213d382aafbSBarry Smith Declare extern C stuff after including external header files 214d382aafbSBarry Smith */ 215d382aafbSBarry Smith 2166a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 21770b3c8c7SBarry Smith 2186edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 2198b49ba18SBarry Smith /* 220390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 2218b49ba18SBarry Smith */ 2228b49ba18SBarry Smith #include <petscmath.h> 2238b49ba18SBarry Smith 2246a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 225d382aafbSBarry Smith 226d382aafbSBarry Smith /*MC 2270298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 228d382aafbSBarry Smith 229d382aafbSBarry Smith Level: beginner 230d382aafbSBarry Smith 231e28ce29aSPatrick Sanan Note: 23287497f52SBarry Smith Accepted by many PETSc functions to not set a parameter and instead use some default 233d382aafbSBarry Smith 23487497f52SBarry Smith Fortran Note: 23587497f52SBarry Smith This macro does not exist in Fortran; you must use `PETSC_NULL_INTEGER`, `PETSC_NULL_DOUBLE_PRECISION` etc 236d382aafbSBarry Smith 237db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_DETERMINE` 238d382aafbSBarry Smith 239d382aafbSBarry Smith M*/ 2400298fd71SBarry Smith #define PETSC_IGNORE NULL 241d382aafbSBarry Smith 242c528d872SBarry Smith /* This is deprecated */ 243c528d872SBarry Smith #define PETSC_NULL NULL 244c528d872SBarry Smith 245d382aafbSBarry Smith /*MC 246557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 247557d4da8SBarry Smith where you wish PETSc to use the default. 248557d4da8SBarry Smith 249557d4da8SBarry Smith Level: beginner 250557d4da8SBarry Smith 251db781477SPatrick Sanan .seealso: `PETSC_DEFAULT`, `PETSC_IGNORE`, `PETSC_DETERMINE` 252557d4da8SBarry Smith 253557d4da8SBarry Smith M*/ 254557d4da8SBarry Smith #define PETSC_DECIDE -1 255557d4da8SBarry Smith 256557d4da8SBarry Smith /*MC 257d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 258d382aafbSBarry Smith where you wish PETSc to compute the required value. 259d382aafbSBarry Smith 260d382aafbSBarry Smith Level: beginner 261d382aafbSBarry Smith 262e28ce29aSPatrick Sanan Developer Note: 26387497f52SBarry Smith I would like to use const `PetscInt` `PETSC_DETERMINE` = `PETSC_DECIDE`; but for 26487497f52SBarry Smith some reason this is not allowed by the standard even though `PETSC_DECIDE` is a constant value. 265557d4da8SBarry Smith 266db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_IGNORE`, `VecSetSizes()` 267d382aafbSBarry Smith 268d382aafbSBarry Smith M*/ 269d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 270d382aafbSBarry Smith 271d382aafbSBarry Smith /*MC 272557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 273557d4da8SBarry Smith where you wish PETSc to use the default. 274557d4da8SBarry Smith 275557d4da8SBarry Smith Level: beginner 276557d4da8SBarry Smith 27787497f52SBarry Smith Fortran Note: 27887497f52SBarry Smith You need to use `PETSC_DEFAULT_INTEGER` or `PETSC_DEFAULT_REAL`. 279557d4da8SBarry Smith 280db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_IGNORE`, `PETSC_DETERMINE` 281557d4da8SBarry Smith 282557d4da8SBarry Smith M*/ 283557d4da8SBarry Smith #define PETSC_DEFAULT -2 284557d4da8SBarry Smith 285557d4da8SBarry Smith /*MC 28687497f52SBarry Smith PETSC_COMM_WORLD - the equivalent of the `MPI_COMM_WORLD` communicator which represents 287ea8fe74dSBarry Smith all the processes that PETSc knows about. 288d382aafbSBarry Smith 289d382aafbSBarry Smith Level: beginner 290d382aafbSBarry Smith 291e28ce29aSPatrick Sanan Notes: 29287497f52SBarry Smith By default `PETSC_COMM_WORLD` and `MPI_COMM_WORLD` are identical unless you wish to 29387497f52SBarry Smith run PETSc on ONLY a subset of `MPI_COMM_WORLD`. In that case create your new (smaller) 29487497f52SBarry Smith communicator, call it, say comm, and set `PETSC_COMM_WORLD` = comm BEFORE calling 29587497f52SBarry Smith PetscInitialize(), but after `MPI_Init()` has been called. 296a990b902SBarry Smith 29787497f52SBarry Smith The value of `PETSC_COMM_WORLD` should never be USED/accessed before `PetscInitialize()` 298a990b902SBarry Smith is called because it may not have a valid value yet. 299d382aafbSBarry Smith 300db781477SPatrick Sanan .seealso: `PETSC_COMM_SELF` 301d382aafbSBarry Smith 302d382aafbSBarry Smith M*/ 303014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 304d382aafbSBarry Smith 305d382aafbSBarry Smith /*MC 30687497f52SBarry Smith PETSC_COMM_SELF - This is always `MPI_COMM_SELF` 307d382aafbSBarry Smith 308d382aafbSBarry Smith Level: beginner 309d382aafbSBarry Smith 310e28ce29aSPatrick Sanan Notes: 311e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 312a990b902SBarry Smith 313db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD` 314d382aafbSBarry Smith 315d382aafbSBarry Smith M*/ 316d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 317d382aafbSBarry Smith 3186de5d289SStefano Zampini /*MC 3196de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 32087497f52SBarry Smith MPI with `MPI_Init_thread()`. 3216de5d289SStefano Zampini 3226de5d289SStefano Zampini Level: beginner 3236de5d289SStefano Zampini 3246de5d289SStefano Zampini Notes: 32587497f52SBarry Smith By default `PETSC_MPI_THREAD_REQUIRED` equals `MPI_THREAD_FUNNELED`. 3266de5d289SStefano Zampini 327db781477SPatrick Sanan .seealso: `PetscInitialize()` 3286de5d289SStefano Zampini 3296de5d289SStefano Zampini M*/ 3306de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 3316de5d289SStefano Zampini 332d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 3338ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 334014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 335014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 3364cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 337d382aafbSBarry Smith 338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm), PetscErrorCode (*)(MPI_Comm)); 339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm, MPI_Comm *, int *); 340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm *); 34157f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm, MPI_Comm *); 34257f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm, MPI_Comm *); 343d382aafbSBarry Smith 34459e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 34559e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 34659e55d94SJunchao Zhang #endif 34759e55d94SJunchao Zhang 34871438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 34971438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 35071438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 35171438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 35271438e86SJunchao Zhang #endif 35371438e86SJunchao Zhang 354540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 355540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 356540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool *); 357540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 358540e20f2SPierre Jolivet #endif 359540e20f2SPierre Jolivet 360d382aafbSBarry Smith /*MC 36187497f52SBarry Smith PetscMalloc - Allocates memory, One should use `PetscNew()`, `PetscMalloc1()` or `PetscCalloc1()` usually instead of this 362d382aafbSBarry Smith 363eca87e8dSBarry Smith Synopsis: 364aaa7dc30SBarry Smith #include <petscsys.h> 365eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 366eca87e8dSBarry Smith 367eca87e8dSBarry Smith Not Collective 368eca87e8dSBarry Smith 369d382aafbSBarry Smith Input Parameter: 370d382aafbSBarry Smith . m - number of bytes to allocate 371d382aafbSBarry Smith 372d382aafbSBarry Smith Output Parameter: 373d382aafbSBarry Smith . result - memory allocated 374d382aafbSBarry Smith 375d382aafbSBarry Smith Level: beginner 376d382aafbSBarry Smith 37749d7da52SJed Brown Notes: 37849d7da52SJed Brown Memory is always allocated at least double aligned 379d382aafbSBarry Smith 38087497f52SBarry Smith It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to `PetscFree()`. 381d382aafbSBarry Smith 382db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 383d382aafbSBarry Smith 384d382aafbSBarry Smith M*/ 385071fcb05SBarry Smith #define PetscMalloc(a, b) ((*PetscTrMalloc)((a), PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 386d382aafbSBarry Smith 387d382aafbSBarry Smith /*MC 3883221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 3893221ece2SMatthew G. Knepley 3903221ece2SMatthew G. Knepley Synopsis: 3913221ece2SMatthew G. Knepley #include <petscsys.h> 3923221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 3933221ece2SMatthew G. Knepley 3943221ece2SMatthew G. Knepley Not Collective 3953221ece2SMatthew G. Knepley 3963221ece2SMatthew G. Knepley Input Parameters: 3973221ece2SMatthew G. Knepley + m - number of bytes to allocate 39892f119d6SBarry Smith - result - previous memory 3993221ece2SMatthew G. Knepley 4003221ece2SMatthew G. Knepley Output Parameter: 4013221ece2SMatthew G. Knepley . result - new memory allocated 4023221ece2SMatthew G. Knepley 4033221ece2SMatthew G. Knepley Level: developer 4043221ece2SMatthew G. Knepley 4053221ece2SMatthew G. Knepley Notes: 4063221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 4073221ece2SMatthew G. Knepley 408db781477SPatrick Sanan .seealso: `PetscMalloc()`, `PetscFree()`, `PetscNew()` 4093221ece2SMatthew G. Knepley 4103221ece2SMatthew G. Knepley M*/ 4113221ece2SMatthew G. Knepley #define PetscRealloc(a, b) ((*PetscTrRealloc)((a), __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 4123221ece2SMatthew G. Knepley 4133221ece2SMatthew G. Knepley /*MC 41487497f52SBarry Smith PetscAddrAlign - Rounds up an address to `PETSC_MEMALIGN` alignment 415d382aafbSBarry Smith 416d382aafbSBarry Smith Synopsis: 417aaa7dc30SBarry Smith #include <petscsys.h> 418d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 419d382aafbSBarry Smith 420eca87e8dSBarry Smith Not Collective 421eca87e8dSBarry Smith 422eca87e8dSBarry Smith Input Parameters: 423eca87e8dSBarry Smith . addr - address to align (any pointer type) 424eca87e8dSBarry Smith 425d382aafbSBarry Smith Level: developer 426d382aafbSBarry Smith 427db781477SPatrick Sanan .seealso: `PetscMallocAlign()` 428d382aafbSBarry Smith 429d382aafbSBarry Smith M*/ 430d382aafbSBarry Smith #define PetscAddrAlign(a) (void *)((((PETSC_UINTPTR_T)(a)) + (PETSC_MEMALIGN - 1)) & ~(PETSC_MEMALIGN - 1)) 431d382aafbSBarry Smith 432d382aafbSBarry Smith /*MC 43387497f52SBarry Smith PetscCalloc - Allocates a cleared (zeroed) memory region aligned to `PETSC_MEMALIGN` 4348f51dc47SJunchao Zhang 4358f51dc47SJunchao Zhang Synopsis: 4368f51dc47SJunchao Zhang #include <petscsys.h> 4378f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 4388f51dc47SJunchao Zhang 4398f51dc47SJunchao Zhang Not Collective 4408f51dc47SJunchao Zhang 4418f51dc47SJunchao Zhang Input Parameter: 4428f51dc47SJunchao Zhang . m - number of bytes to allocate 4438f51dc47SJunchao Zhang 4448f51dc47SJunchao Zhang Output Parameter: 4458f51dc47SJunchao Zhang . result - memory allocated 4468f51dc47SJunchao Zhang 4478f51dc47SJunchao Zhang Level: beginner 4488f51dc47SJunchao Zhang 4498f51dc47SJunchao Zhang Notes: 4508f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 4518f51dc47SJunchao Zhang 4528f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 4538f51dc47SJunchao Zhang 454db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 4558f51dc47SJunchao Zhang 4568f51dc47SJunchao Zhang M*/ 45766122d6dSBarry Smith #define PetscCalloc(m, result) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m), (result)) 4588f51dc47SJunchao Zhang 4598f51dc47SJunchao Zhang /*MC 46087497f52SBarry Smith PetscMalloc1 - Allocates an array of memory aligned to `PETSC_MEMALIGN` 461d382aafbSBarry Smith 462eca87e8dSBarry Smith Synopsis: 463aaa7dc30SBarry Smith #include <petscsys.h> 464785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 465785e854fSJed Brown 466785e854fSJed Brown Not Collective 467785e854fSJed Brown 468785e854fSJed Brown Input Parameter: 469390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 470785e854fSJed Brown 471785e854fSJed Brown Output Parameter: 4721fe1b817SJunchao Zhang . r1 - memory allocated 473785e854fSJed Brown 474e28ce29aSPatrick Sanan Note: 475e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 47687497f52SBarry Smith multiply the number of elements requested by the `sizeof()` the type. For example use 477390e1bf2SBarry Smith $ PetscInt *id; 478390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 479390e1bf2SBarry Smith not 480390e1bf2SBarry Smith $ PetscInt *id; 481390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 482390e1bf2SBarry Smith 48387497f52SBarry Smith Does not zero the memory allocated, use `PetscCalloc1()` to obtain memory that has been zeroed. 484390e1bf2SBarry Smith 485390e1bf2SBarry Smith Level: beginner 486785e854fSJed Brown 487db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 488785e854fSJed Brown 489785e854fSJed Brown M*/ 49066122d6dSBarry Smith #define PetscMalloc1(m1, r1) PetscMallocA(1, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1)) 491785e854fSJed Brown 492785e854fSJed Brown /*MC 49387497f52SBarry Smith PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to `PETSC_MEMALIGN` 4941795a4d1SJed Brown 4951795a4d1SJed Brown Synopsis: 496aaa7dc30SBarry Smith #include <petscsys.h> 4971795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 4981795a4d1SJed Brown 4991795a4d1SJed Brown Not Collective 5001795a4d1SJed Brown 5011795a4d1SJed Brown Input Parameter: 5021795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5031795a4d1SJed Brown 5041795a4d1SJed Brown Output Parameter: 5051fe1b817SJunchao Zhang . r1 - memory allocated 5061795a4d1SJed Brown 507e28ce29aSPatrick Sanan Notes: 50887497f52SBarry Smith See `PetsMalloc1()` for more details on usage. 509390e1bf2SBarry Smith 510390e1bf2SBarry Smith Level: beginner 5111795a4d1SJed Brown 512db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 5131795a4d1SJed Brown 5141795a4d1SJed Brown M*/ 51566122d6dSBarry Smith #define PetscCalloc1(m1, r1) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1)) 5161795a4d1SJed Brown 5171795a4d1SJed Brown /*MC 51887497f52SBarry Smith PetscMalloc2 - Allocates 2 arrays of memory both aligned to `PETSC_MEMALIGN` 519d382aafbSBarry Smith 520eca87e8dSBarry Smith Synopsis: 521aaa7dc30SBarry Smith #include <petscsys.h> 522dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 523eca87e8dSBarry Smith 524eca87e8dSBarry Smith Not Collective 525eca87e8dSBarry Smith 526d8d19677SJose E. Roman Input Parameters: 527d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 528dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 529d382aafbSBarry Smith 530d8d19677SJose E. Roman Output Parameters: 531d382aafbSBarry Smith + r1 - memory allocated in first chunk 532d382aafbSBarry Smith - r2 - memory allocated in second chunk 533d382aafbSBarry Smith 534d382aafbSBarry Smith Level: developer 535d382aafbSBarry Smith 536db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 537d382aafbSBarry Smith 538d382aafbSBarry Smith M*/ 53966122d6dSBarry Smith #define PetscMalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2)) 540d382aafbSBarry Smith 541d382aafbSBarry Smith /*MC 54287497f52SBarry Smith PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to `PETSC_MEMALIGN` 543d382aafbSBarry Smith 544eca87e8dSBarry Smith Synopsis: 545aaa7dc30SBarry Smith #include <petscsys.h> 5461795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 547eca87e8dSBarry Smith 548eca87e8dSBarry Smith Not Collective 549eca87e8dSBarry Smith 550d8d19677SJose E. Roman Input Parameters: 551d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5521795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5531795a4d1SJed Brown 554d8d19677SJose E. Roman Output Parameters: 5551795a4d1SJed Brown + r1 - memory allocated in first chunk 5561795a4d1SJed Brown - r2 - memory allocated in second chunk 5571795a4d1SJed Brown 5581795a4d1SJed Brown Level: developer 5591795a4d1SJed Brown 560db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 5611795a4d1SJed Brown 5621795a4d1SJed Brown M*/ 56366122d6dSBarry Smith #define PetscCalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2)) 5641795a4d1SJed Brown 5651795a4d1SJed Brown /*MC 56687497f52SBarry Smith PetscMalloc3 - Allocates 3 arrays of memory, all aligned to `PETSC_MEMALIGN` 567d382aafbSBarry Smith 568d382aafbSBarry Smith Synopsis: 569aaa7dc30SBarry Smith #include <petscsys.h> 570dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 571d382aafbSBarry Smith 572d382aafbSBarry Smith Not Collective 573d382aafbSBarry Smith 574d8d19677SJose E. Roman Input Parameters: 575d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 576d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 577dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 578d382aafbSBarry Smith 579d8d19677SJose E. Roman Output Parameters: 580d382aafbSBarry Smith + r1 - memory allocated in first chunk 581d382aafbSBarry Smith . r2 - memory allocated in second chunk 582d382aafbSBarry Smith - r3 - memory allocated in third chunk 583d382aafbSBarry Smith 584d382aafbSBarry Smith Level: developer 585d382aafbSBarry Smith 586db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc3()`, `PetscFree3()` 587d382aafbSBarry Smith 588d382aafbSBarry Smith M*/ 58966122d6dSBarry Smith #define PetscMalloc3(m1, r1, m2, r2, m3, r3) PetscMallocA(3, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3)) 590d382aafbSBarry Smith 591d382aafbSBarry Smith /*MC 59287497f52SBarry Smith PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 593d382aafbSBarry Smith 594eca87e8dSBarry Smith Synopsis: 595aaa7dc30SBarry Smith #include <petscsys.h> 5961795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 597eca87e8dSBarry Smith 598eca87e8dSBarry Smith Not Collective 599eca87e8dSBarry Smith 600d8d19677SJose E. Roman Input Parameters: 601d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 602d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 6031795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 6041795a4d1SJed Brown 605d8d19677SJose E. Roman Output Parameters: 6061795a4d1SJed Brown + r1 - memory allocated in first chunk 6071795a4d1SJed Brown . r2 - memory allocated in second chunk 6081795a4d1SJed Brown - r3 - memory allocated in third chunk 6091795a4d1SJed Brown 6101795a4d1SJed Brown Level: developer 6111795a4d1SJed Brown 612db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc2()`, `PetscMalloc3()`, `PetscFree3()` 6131795a4d1SJed Brown 6141795a4d1SJed Brown M*/ 61566122d6dSBarry Smith #define PetscCalloc3(m1, r1, m2, r2, m3, r3) PetscMallocA(3, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3)) 6161795a4d1SJed Brown 6171795a4d1SJed Brown /*MC 61887497f52SBarry Smith PetscMalloc4 - Allocates 4 arrays of memory, all aligned to `PETSC_MEMALIGN` 619d382aafbSBarry Smith 620d382aafbSBarry Smith Synopsis: 621aaa7dc30SBarry Smith #include <petscsys.h> 622dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 623d382aafbSBarry Smith 624d382aafbSBarry Smith Not Collective 625d382aafbSBarry Smith 626d8d19677SJose E. Roman Input Parameters: 627d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 628d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 629d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 630dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 631d382aafbSBarry Smith 632d8d19677SJose E. Roman Output Parameters: 633d382aafbSBarry Smith + r1 - memory allocated in first chunk 634d382aafbSBarry Smith . r2 - memory allocated in second chunk 635d382aafbSBarry Smith . r3 - memory allocated in third chunk 636d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 637d382aafbSBarry Smith 638d382aafbSBarry Smith Level: developer 639d382aafbSBarry Smith 640db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 641d382aafbSBarry Smith 642d382aafbSBarry Smith M*/ 6439371c9d4SSatish Balay #define PetscMalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 6449371c9d4SSatish Balay PetscMallocA(4, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4)) 645d382aafbSBarry Smith 646d382aafbSBarry Smith /*MC 64787497f52SBarry Smith PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 648d382aafbSBarry Smith 649eca87e8dSBarry Smith Synopsis: 650aaa7dc30SBarry Smith #include <petscsys.h> 6511795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 652eca87e8dSBarry Smith 653eca87e8dSBarry Smith Not Collective 654eca87e8dSBarry Smith 655e28ce29aSPatrick Sanan Input Parameters: 656d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 657d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 658d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6591795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6601795a4d1SJed Brown 661e28ce29aSPatrick Sanan Output Parameters: 6621795a4d1SJed Brown + r1 - memory allocated in first chunk 6631795a4d1SJed Brown . r2 - memory allocated in second chunk 6641795a4d1SJed Brown . r3 - memory allocated in third chunk 6651795a4d1SJed Brown - r4 - memory allocated in fourth chunk 6661795a4d1SJed Brown 6671795a4d1SJed Brown Level: developer 6681795a4d1SJed Brown 669db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 6701795a4d1SJed Brown 6711795a4d1SJed Brown M*/ 6729371c9d4SSatish Balay #define PetscCalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 6739371c9d4SSatish Balay PetscMallocA(4, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4)) 6741795a4d1SJed Brown 6751795a4d1SJed Brown /*MC 67687497f52SBarry Smith PetscMalloc5 - Allocates 5 arrays of memory, all aligned to `PETSC_MEMALIGN` 677d382aafbSBarry Smith 678d382aafbSBarry Smith Synopsis: 679aaa7dc30SBarry Smith #include <petscsys.h> 680dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 681d382aafbSBarry Smith 682d382aafbSBarry Smith Not Collective 683d382aafbSBarry Smith 684e28ce29aSPatrick Sanan Input Parameters: 685d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 686d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 687d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 688d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 689dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 690d382aafbSBarry Smith 691e28ce29aSPatrick Sanan Output Parameters: 692d382aafbSBarry Smith + r1 - memory allocated in first chunk 693d382aafbSBarry Smith . r2 - memory allocated in second chunk 694d382aafbSBarry Smith . r3 - memory allocated in third chunk 695d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 696d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 697d382aafbSBarry Smith 698d382aafbSBarry Smith Level: developer 699d382aafbSBarry Smith 700db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc5()`, `PetscFree5()` 701d382aafbSBarry Smith 702d382aafbSBarry Smith M*/ 7039371c9d4SSatish Balay #define PetscMalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 7049371c9d4SSatish Balay PetscMallocA(5, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5)) 705d382aafbSBarry Smith 706d382aafbSBarry Smith /*MC 70787497f52SBarry Smith PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 708d382aafbSBarry Smith 709eca87e8dSBarry Smith Synopsis: 710aaa7dc30SBarry Smith #include <petscsys.h> 7111795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 712eca87e8dSBarry Smith 713eca87e8dSBarry Smith Not Collective 714eca87e8dSBarry Smith 715e28ce29aSPatrick Sanan Input Parameters: 716d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 717d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 718d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 719d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7201795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7211795a4d1SJed Brown 722e28ce29aSPatrick Sanan Output Parameters: 7231795a4d1SJed Brown + r1 - memory allocated in first chunk 7241795a4d1SJed Brown . r2 - memory allocated in second chunk 7251795a4d1SJed Brown . r3 - memory allocated in third chunk 7261795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7271795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7281795a4d1SJed Brown 7291795a4d1SJed Brown Level: developer 7301795a4d1SJed Brown 731db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc5()`, `PetscFree5()` 7321795a4d1SJed Brown 7331795a4d1SJed Brown M*/ 7349371c9d4SSatish Balay #define PetscCalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 7359371c9d4SSatish Balay PetscMallocA(5, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5)) 736d382aafbSBarry Smith 737d382aafbSBarry Smith /*MC 73887497f52SBarry Smith PetscMalloc6 - Allocates 6 arrays of memory, all aligned to `PETSC_MEMALIGN` 739d382aafbSBarry Smith 740d382aafbSBarry Smith Synopsis: 741aaa7dc30SBarry Smith #include <petscsys.h> 742dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 743d382aafbSBarry Smith 744d382aafbSBarry Smith Not Collective 745d382aafbSBarry Smith 746e28ce29aSPatrick Sanan Input Parameters: 747d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 748d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 749d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 750d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 751d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 752dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 753d382aafbSBarry Smith 754e28ce29aSPatrick Sanan Output Parameteasr: 755d382aafbSBarry Smith + r1 - memory allocated in first chunk 756d382aafbSBarry Smith . r2 - memory allocated in second chunk 757d382aafbSBarry Smith . r3 - memory allocated in third chunk 758d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 759d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 760d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 761d382aafbSBarry Smith 762d382aafbSBarry Smith Level: developer 763d382aafbSBarry Smith 764db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc6()`, `PetscFree3()`, `PetscFree4()`, `PetscFree5()`, `PetscFree6()` 765d382aafbSBarry Smith 766d382aafbSBarry Smith M*/ 7679371c9d4SSatish Balay #define PetscMalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 7689371c9d4SSatish Balay PetscMallocA(6, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6)) 769d382aafbSBarry Smith 770d382aafbSBarry Smith /*MC 77187497f52SBarry Smith PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 772d382aafbSBarry Smith 773eca87e8dSBarry Smith Synopsis: 774aaa7dc30SBarry Smith #include <petscsys.h> 7751795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 776eca87e8dSBarry Smith 777eca87e8dSBarry Smith Not Collective 778eca87e8dSBarry Smith 779e28ce29aSPatrick Sanan Input Parameters: 780d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 781d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 782d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 783d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 784d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 7851795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 7861795a4d1SJed Brown 787e28ce29aSPatrick Sanan Output Parameters: 7881795a4d1SJed Brown + r1 - memory allocated in first chunk 7891795a4d1SJed Brown . r2 - memory allocated in second chunk 7901795a4d1SJed Brown . r3 - memory allocated in third chunk 7911795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7921795a4d1SJed Brown . r5 - memory allocated in fifth chunk 7931795a4d1SJed Brown - r6 - memory allocated in sixth chunk 7941795a4d1SJed Brown 7951795a4d1SJed Brown Level: developer 7961795a4d1SJed Brown 797db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc6()`, `PetscFree6()` 7981795a4d1SJed Brown 7991795a4d1SJed Brown M*/ 8009371c9d4SSatish Balay #define PetscCalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 8019371c9d4SSatish Balay PetscMallocA(6, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6)) 8021795a4d1SJed Brown 8031795a4d1SJed Brown /*MC 80487497f52SBarry Smith PetscMalloc7 - Allocates 7 arrays of memory, all aligned to `PETSC_MEMALIGN` 805d382aafbSBarry Smith 806d382aafbSBarry Smith Synopsis: 807aaa7dc30SBarry Smith #include <petscsys.h> 808dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 809d382aafbSBarry Smith 810d382aafbSBarry Smith Not Collective 811d382aafbSBarry Smith 812e28ce29aSPatrick Sanan Input Parameters: 813d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 814d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 815d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 816d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 817d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 818d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 819dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 820d382aafbSBarry Smith 821e28ce29aSPatrick Sanan Output Parameters: 822d382aafbSBarry Smith + r1 - memory allocated in first chunk 823d382aafbSBarry Smith . r2 - memory allocated in second chunk 824d382aafbSBarry Smith . r3 - memory allocated in third chunk 825d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 826d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 827d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 828eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 829d382aafbSBarry Smith 830d382aafbSBarry Smith Level: developer 831d382aafbSBarry Smith 832db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc7()`, `PetscFree7()` 833d382aafbSBarry Smith 834d382aafbSBarry Smith M*/ 8359371c9d4SSatish Balay #define PetscMalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 8369371c9d4SSatish Balay PetscMallocA(7, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6), (size_t)((size_t)m7) * sizeof(**(r7)), (r7)) 837d382aafbSBarry Smith 838d382aafbSBarry Smith /*MC 83987497f52SBarry Smith PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 8401795a4d1SJed Brown 8411795a4d1SJed Brown Synopsis: 842aaa7dc30SBarry Smith #include <petscsys.h> 8431795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8441795a4d1SJed Brown 8451795a4d1SJed Brown Not Collective 8461795a4d1SJed Brown 847e28ce29aSPatrick Sanan Input Parameters: 8481795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8491795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8501795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8511795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8521795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8531795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8541795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8551795a4d1SJed Brown 856e28ce29aSPatrick Sanan Output Parameters: 8571795a4d1SJed Brown + r1 - memory allocated in first chunk 8581795a4d1SJed Brown . r2 - memory allocated in second chunk 8591795a4d1SJed Brown . r3 - memory allocated in third chunk 8601795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8611795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8621795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8631795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8641795a4d1SJed Brown 8651795a4d1SJed Brown Level: developer 8661795a4d1SJed Brown 867db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc7()`, `PetscFree7()` 8681795a4d1SJed Brown 8691795a4d1SJed Brown M*/ 8709371c9d4SSatish Balay #define PetscCalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 8719371c9d4SSatish Balay PetscMallocA(7, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6), (size_t)((size_t)m7) * sizeof(**(r7)), (r7)) 8721795a4d1SJed Brown 8731795a4d1SJed Brown /*MC 87487497f52SBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to `PETSC_MEMALIGN` 875d382aafbSBarry Smith 876eca87e8dSBarry Smith Synopsis: 877aaa7dc30SBarry Smith #include <petscsys.h> 878b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 879eca87e8dSBarry Smith 880eca87e8dSBarry Smith Not Collective 881eca87e8dSBarry Smith 882d382aafbSBarry Smith Output Parameter: 883b00a9115SJed Brown . result - memory allocated, sized to match pointer type 884d382aafbSBarry Smith 885d382aafbSBarry Smith Level: beginner 886d382aafbSBarry Smith 887db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscMalloc()`, `PetscNewLog()`, `PetscCalloc1()`, `PetscMalloc1()` 888d382aafbSBarry Smith 889d382aafbSBarry Smith M*/ 890b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1, (b)) 891ad0619ddSBarry Smith 892ad0619ddSBarry Smith /*MC 89387497f52SBarry Smith PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to `PETSC_MEMALIGN`. Associates the memory allocated 89487497f52SBarry Smith with the given object using `PetscLogObjectMemory()`. 895ad0619ddSBarry Smith 896ad0619ddSBarry Smith Synopsis: 897aaa7dc30SBarry Smith #include <petscsys.h> 898b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 899ad0619ddSBarry Smith 900ad0619ddSBarry Smith Not Collective 901ad0619ddSBarry Smith 902ad0619ddSBarry Smith Input Parameter: 903b00a9115SJed Brown . obj - object memory is logged to 904ad0619ddSBarry Smith 905ad0619ddSBarry Smith Output Parameter: 906b00a9115SJed Brown . result - memory allocated, sized to match pointer type 907ad0619ddSBarry Smith 908ad0619ddSBarry Smith Level: developer 909ad0619ddSBarry Smith 910db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscMalloc()`, `PetscNew()`, `PetscLogObjectMemory()`, `PetscCalloc1()`, `PetscMalloc1()` 911ad0619ddSBarry Smith 912ad0619ddSBarry Smith M*/ 913d12f57a0SLisandro Dalcin #define PetscNewLog(o, b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o, sizeof(**(b)))) 914d382aafbSBarry Smith 915d382aafbSBarry Smith /*MC 916d382aafbSBarry Smith PetscFree - Frees memory 917d382aafbSBarry Smith 918eca87e8dSBarry Smith Synopsis: 919aaa7dc30SBarry Smith #include <petscsys.h> 920eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 921eca87e8dSBarry Smith 922eca87e8dSBarry Smith Not Collective 923eca87e8dSBarry Smith 924d382aafbSBarry Smith Input Parameter: 9257f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 926d382aafbSBarry Smith 927d382aafbSBarry Smith Level: beginner 928d382aafbSBarry Smith 92949d7da52SJed Brown Notes: 93087497f52SBarry Smith Do not free memory obtained with `PetscMalloc2()`, `PetscCalloc2()` etc, they must be freed with `PetscFree2()` etc. 931390e1bf2SBarry Smith 93287497f52SBarry Smith It is safe to call `PetscFree()` on a NULL pointer. 933d382aafbSBarry Smith 934db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscNewLog()`, `PetscMalloc1()`, `PetscCalloc1()` 935d382aafbSBarry Smith 936d382aafbSBarry Smith M*/ 937ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void *)(a), __LINE__, PETSC_FUNCTION_NAME, __FILE__) || ((a) = NULL, 0)) 938d382aafbSBarry Smith 939d382aafbSBarry Smith /*MC 94087497f52SBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with `PetscMalloc2()` 941d382aafbSBarry Smith 942eca87e8dSBarry Smith Synopsis: 943aaa7dc30SBarry Smith #include <petscsys.h> 944eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 945eca87e8dSBarry Smith 946eca87e8dSBarry Smith Not Collective 947eca87e8dSBarry Smith 948e28ce29aSPatrick Sanan Input Parameters: 949d382aafbSBarry Smith + memory1 - memory to free 950d382aafbSBarry Smith - memory2 - 2nd memory to free 951d382aafbSBarry Smith 952d382aafbSBarry Smith Level: developer 953d382aafbSBarry Smith 95495452b02SPatrick Sanan Notes: 95587497f52SBarry Smith Memory must have been obtained with `PetscMalloc2()` 956d382aafbSBarry Smith 957db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()` 958d382aafbSBarry Smith 959d382aafbSBarry Smith M*/ 960ba282f50SJed Brown #define PetscFree2(m1, m2) PetscFreeA(2, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2)) 961d382aafbSBarry Smith 962d382aafbSBarry Smith /*MC 96387497f52SBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with `PetscMalloc3()` 964d382aafbSBarry Smith 965eca87e8dSBarry Smith Synopsis: 966aaa7dc30SBarry Smith #include <petscsys.h> 967eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 968eca87e8dSBarry Smith 969eca87e8dSBarry Smith Not Collective 970eca87e8dSBarry Smith 971e28ce29aSPatrick Sanan Input Parameters: 972d382aafbSBarry Smith + memory1 - memory to free 973d382aafbSBarry Smith . memory2 - 2nd memory to free 974d382aafbSBarry Smith - memory3 - 3rd memory to free 975d382aafbSBarry Smith 976d382aafbSBarry Smith Level: developer 977d382aafbSBarry Smith 97895452b02SPatrick Sanan Notes: 97987497f52SBarry Smith Memory must have been obtained with `PetscMalloc3()` 980d382aafbSBarry Smith 981db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()` 982d382aafbSBarry Smith 983d382aafbSBarry Smith M*/ 984ba282f50SJed Brown #define PetscFree3(m1, m2, m3) PetscFreeA(3, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3)) 985d382aafbSBarry Smith 986d382aafbSBarry Smith /*MC 98787497f52SBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with `PetscMalloc4()` 988d382aafbSBarry Smith 989eca87e8dSBarry Smith Synopsis: 990aaa7dc30SBarry Smith #include <petscsys.h> 991eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 992eca87e8dSBarry Smith 993eca87e8dSBarry Smith Not Collective 994eca87e8dSBarry Smith 995e28ce29aSPatrick Sanan Input Parameters: 996d382aafbSBarry Smith + m1 - memory to free 997d382aafbSBarry Smith . m2 - 2nd memory to free 998d382aafbSBarry Smith . m3 - 3rd memory to free 999d382aafbSBarry Smith - m4 - 4th memory to free 1000d382aafbSBarry Smith 1001d382aafbSBarry Smith Level: developer 1002d382aafbSBarry Smith 100395452b02SPatrick Sanan Notes: 100487497f52SBarry Smith Memory must have been obtained with `PetscMalloc4()` 1005d382aafbSBarry Smith 1006db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()` 1007d382aafbSBarry Smith 1008d382aafbSBarry Smith M*/ 1009ba282f50SJed Brown #define PetscFree4(m1, m2, m3, m4) PetscFreeA(4, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4)) 1010d382aafbSBarry Smith 1011d382aafbSBarry Smith /*MC 101287497f52SBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with `PetscMalloc5()` 1013d382aafbSBarry Smith 1014eca87e8dSBarry Smith Synopsis: 1015aaa7dc30SBarry Smith #include <petscsys.h> 1016eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1017eca87e8dSBarry Smith 1018eca87e8dSBarry Smith Not Collective 1019eca87e8dSBarry Smith 1020e28ce29aSPatrick Sanan Input Parameters: 1021d382aafbSBarry Smith + m1 - memory to free 1022d382aafbSBarry Smith . m2 - 2nd memory to free 1023d382aafbSBarry Smith . m3 - 3rd memory to free 1024d382aafbSBarry Smith . m4 - 4th memory to free 1025d382aafbSBarry Smith - m5 - 5th memory to free 1026d382aafbSBarry Smith 1027d382aafbSBarry Smith Level: developer 1028d382aafbSBarry Smith 102995452b02SPatrick Sanan Notes: 103087497f52SBarry Smith Memory must have been obtained with `PetscMalloc5()` 1031d382aafbSBarry Smith 1032db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()` 1033d382aafbSBarry Smith 1034d382aafbSBarry Smith M*/ 1035ba282f50SJed Brown #define PetscFree5(m1, m2, m3, m4, m5) PetscFreeA(5, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5)) 1036d382aafbSBarry Smith 1037d382aafbSBarry Smith /*MC 103887497f52SBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with `PetscMalloc6()` 1039d382aafbSBarry Smith 1040eca87e8dSBarry Smith Synopsis: 1041aaa7dc30SBarry Smith #include <petscsys.h> 1042eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1043eca87e8dSBarry Smith 1044eca87e8dSBarry Smith Not Collective 1045eca87e8dSBarry Smith 1046e28ce29aSPatrick Sanan Input Parameters: 1047d382aafbSBarry Smith + m1 - memory to free 1048d382aafbSBarry Smith . m2 - 2nd memory to free 1049d382aafbSBarry Smith . m3 - 3rd memory to free 1050d382aafbSBarry Smith . m4 - 4th memory to free 1051d382aafbSBarry Smith . m5 - 5th memory to free 1052d382aafbSBarry Smith - m6 - 6th memory to free 1053d382aafbSBarry Smith 1054d382aafbSBarry Smith Level: developer 1055d382aafbSBarry Smith 105695452b02SPatrick Sanan Notes: 105787497f52SBarry Smith Memory must have been obtained with `PetscMalloc6()` 1058d382aafbSBarry Smith 1059db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()` 1060d382aafbSBarry Smith 1061d382aafbSBarry Smith M*/ 1062ba282f50SJed Brown #define PetscFree6(m1, m2, m3, m4, m5, m6) PetscFreeA(6, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6)) 1063d382aafbSBarry Smith 1064d382aafbSBarry Smith /*MC 106587497f52SBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with `PetscMalloc7()` 1066d382aafbSBarry Smith 1067eca87e8dSBarry Smith Synopsis: 1068aaa7dc30SBarry Smith #include <petscsys.h> 1069eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1070eca87e8dSBarry Smith 1071eca87e8dSBarry Smith Not Collective 1072eca87e8dSBarry Smith 1073e28ce29aSPatrick Sanan Input Parameters: 1074d382aafbSBarry Smith + m1 - memory to free 1075d382aafbSBarry Smith . m2 - 2nd memory to free 1076d382aafbSBarry Smith . m3 - 3rd memory to free 1077d382aafbSBarry Smith . m4 - 4th memory to free 1078d382aafbSBarry Smith . m5 - 5th memory to free 1079d382aafbSBarry Smith . m6 - 6th memory to free 1080d382aafbSBarry Smith - m7 - 7th memory to free 1081d382aafbSBarry Smith 1082d382aafbSBarry Smith Level: developer 1083d382aafbSBarry Smith 108495452b02SPatrick Sanan Notes: 108587497f52SBarry Smith Memory must have been obtained with `PetscMalloc7()` 1086d382aafbSBarry Smith 1087db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`, 1088db781477SPatrick Sanan `PetscMalloc7()` 1089d382aafbSBarry Smith 1090d382aafbSBarry Smith M*/ 1091ba282f50SJed Brown #define PetscFree7(m1, m2, m3, m4, m5, m6, m7) PetscFreeA(7, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6), &(m7)) 1092d382aafbSBarry Smith 1093ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int, PetscBool, int, const char *, const char *, size_t, void *, ...); 1094ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int, int, const char *, const char *, void *, ...); 1095071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t, PetscBool, int, const char[], const char[], void **); 1096efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void *, int, const char[], const char[]); 10973221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t, int, const char[], const char[], void **); 1098ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 109992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t, PetscBool, int, const char[], const char[], void **), PetscErrorCode (*)(void *, int, const char[], const char[]), PetscErrorCode (*)(size_t, int, const char[], const char[], void **)); 1100014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1101d382aafbSBarry Smith 1102d382aafbSBarry Smith /* 1103c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1104c1706be6SHong Zhang */ 1105c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1106c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 110731f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 110831f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 110931f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 111031f06eaaSHong Zhang #endif 111159af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 111259af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 111359af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 111459af0bd3SScott Kruger #endif 111559af0bd3SScott Kruger 1116a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 111736763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1118a5057860SBarry Smith 1119a5057860SBarry Smith /* 112066d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1121d382aafbSBarry Smith */ 1122014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 112392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1124014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1125014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1126e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1127e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int, PetscLogDouble *); 112892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool, PetscBool); 112992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool *, PetscBool *, PetscBool *); 1130efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int, const char[], const char[]); 113192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 113292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool *); 1133608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1134608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool *); 1135d382aafbSBarry Smith 11366a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType, MPI_Datatype *); 1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype, PetscDataType *); 1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType, size_t *); 11408e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char *, PetscDataType *, PetscBool *); 1141d382aafbSBarry Smith 1142d382aafbSBarry Smith /* 1143d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1144d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1145d382aafbSBarry Smith functionality and/or error checking. 1146d382aafbSBarry Smith */ 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void *, const void *, size_t, PetscBool *); 1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[], size_t *); 1149d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[], char, int *, char ***); 1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int, char **); 1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[], const char[], PetscBool *); 1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[], const char[], PetscBool *); 1153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[], const char[], PetscBool *); 1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[], const char[], size_t, PetscBool *); 1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[], const char[]); 1156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[], const char[]); 1157a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[], const char[], size_t); 1158014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[], const char[], size_t); 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[], char, char *[]); 1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11612f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[], char, char *[]); 1163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[], const char[], char *[]); 1164014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[], const char[], char *[]); 1165014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[], const char[], PetscBool *); 11662c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[], const char[], PetscBool *); 1167014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[], const char *const *, PetscInt *); 1168014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[], char *[]); 116947340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const *, char ***); 11706fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char ***); 11716991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt, const char *const *, char ***); 11726991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt, char ***); 1173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm, const char[], char[], size_t); 1174d382aafbSBarry Smith 1175573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[], const char[], PetscBool *); 1176573b0fb4SBarry Smith 1177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[], const char, PetscToken *); 1178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken, char *[]); 1179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken *); 1180d382aafbSBarry Smith 1181e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[], const char[], char, PetscBool *); 118280b92c66SBarry Smith PETSC_EXTERN const char *PetscBasename(const char[]); 1183a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt, const char *const *, const char *, PetscInt *, PetscBool *); 1184a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const *, const char *, PetscEnum *, PetscBool *); 1185a53986e1SJed Brown 1186d382aafbSBarry Smith /* 1187d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1188d382aafbSBarry Smith */ 1189367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1190570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1191de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1192014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1193014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1194d9822059SBarry Smith #else 1195de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1196d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1197d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1198d9822059SBarry Smith #endif 11999e517322SPierre Jolivet #if defined(PETSC_HAVE_REAL___FLOAT128) || defined(PETSC_HAVE_REAL___FP16) 1200613bf2b2SPierre Jolivet /*MC 12019e517322SPierre Jolivet MPIU_SUM___FP16___FLOAT128 - MPI_Op that acts as a replacement for MPI_SUM with 12029e517322SPierre Jolivet custom MPI_Datatype `MPIU___FLOAT128`, `MPIU___COMPLEX128`, and `MPIU___FP16`. 1203613bf2b2SPierre Jolivet 1204613bf2b2SPierre Jolivet Level: advanced 1205613bf2b2SPierre Jolivet 1206613bf2b2SPierre Jolivet Developer Note: 1207613bf2b2SPierre Jolivet This should be unified with `MPIU_SUM` 1208613bf2b2SPierre Jolivet 1209613bf2b2SPierre Jolivet .seealso: `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 1210613bf2b2SPierre Jolivet M*/ 12119e517322SPierre Jolivet PETSC_EXTERN MPI_Op MPIU_SUM___FP16___FLOAT128; 1212613bf2b2SPierre Jolivet #endif 1213014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 1214d382aafbSBarry Smith 1215014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm); 1216014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm); 1217eb3f98d2SBarry Smith 121895c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1219d6a4318aSJed Brown 1220639ff905SBarry Smith /* 1221639ff905SBarry Smith Defines PETSc error handling. 1222639ff905SBarry Smith */ 1223639ff905SBarry Smith #include <petscerror.h> 1224d382aafbSBarry Smith 1225660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabled; /* code is running in the PETSc test harness CI */ 1226660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabledPortableErrorOutput; /* error output is stripped to ensure portability of error messages across systems */ 1227660278c0SBarry Smith PETSC_EXTERN const char *PetscCIFilename(const char *); 1228660278c0SBarry Smith PETSC_EXTERN int PetscCILinenumber(int); 1229660278c0SBarry Smith 12300700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1231014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1232014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[], PetscClassId *); 123481256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject, PetscObjectId *); 123581256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject, PetscObjectId, PetscBool *); 123681256985SMatthew G. Knepley 1237d382aafbSBarry Smith /* 1238d382aafbSBarry Smith Routines that get memory usage information from the OS 1239d382aafbSBarry Smith */ 1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1243b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1244d382aafbSBarry Smith 1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1246d382aafbSBarry Smith 1247d382aafbSBarry Smith /* 1248d382aafbSBarry Smith Initialization of PETSc 1249d382aafbSBarry Smith */ 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int *, char ***, const char[], const char[]); 1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int, char **, const char[], const char[]); 1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int *, char ***); 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1260d382aafbSBarry Smith 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1262607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1263d382aafbSBarry Smith 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[], const char[]); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject, const char[]); 1268d382aafbSBarry Smith 1269a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscBool *); 1270a50e088cSMatthew G. Knepley 1271d382aafbSBarry Smith /* 1272d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12732981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1274d382aafbSBarry Smith */ 1275638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1276638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1277638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1278d382aafbSBarry Smith 1279d382aafbSBarry Smith /* 1280d382aafbSBarry Smith Functions that can act on any PETSc object. 1281d382aafbSBarry Smith */ 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject *); 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject, MPI_Comm *); 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject, PetscClassId *); 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject, const char *[]); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject, const char *[]); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject, const char[]); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject, const char *[]); 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject, PetscInt); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject, PetscInt *); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject, PetscObject, PetscInt); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject, PetscInt *); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject, PetscMPIInt *); 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject, const char[], PetscObject); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject, const char[]); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject, const char[], PetscObject *); 1299bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject, const char[], void (*)(void)); 1300bdf89e91SBarry Smith #define PetscObjectComposeFunction(a, b, d) PetscObjectComposeFunction_Private(a, b, (PetscVoidFunction)(d)) 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 13030eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 13040eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject, PetscObject); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm, PetscMPIInt *); 1306d382aafbSBarry Smith 1307665c2dedSJed Brown #include <petscviewertypes.h> 1308639ff905SBarry Smith #include <petscoptions.h> 1309639ff905SBarry Smith 1310608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer, PetscBool, PetscLogDouble); 1311608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool *); 1312608c71bfSMatthew G. Knepley 13130633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm, PetscInt, PetscObject *, PetscInt *, PetscInt *); 13140633abcbSJed Brown 1315c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer, const char[]); 1316dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject, PetscViewer); 1317639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject, PetscViewer); 13180005d66cSJed Brown #define PetscObjectQueryFunction(obj, name, fptr) PetscObjectQueryFunction_Private((obj), (name), (PetscVoidFunction *)(fptr)) 13190005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject, const char[], void (**)(void)); 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject, const char[]); 1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject, const char[]); 1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject, const char[]); 1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject, const char *[]); 1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject, const char[]); 1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1327685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject, PetscObject, const char[]); 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject, const char[], PetscBool *); 1330*013e2dc7SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectObjectTypeCompare(PetscObject, PetscObject, PetscBool *); 13314099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject, const char[], PetscBool *); 1332014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1333b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1336d382aafbSBarry Smith 1337e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13387aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1339e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1340e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject, PetscBool); 1341e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1342e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1343e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1344e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1345e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1346e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1347e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 134815681b3cSBarry Smith 1349ec7429eaSBarry Smith #else 13507aab2a10SBarry Smith #define PetscSAWsBlock() 0 1351e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1352e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj, flg) 0 1353e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1354e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1355e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1356e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1357e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1358e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1359e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 136015681b3cSBarry Smith 1361ec7429eaSBarry Smith #endif 1362b90c6cbeSBarry Smith 136382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[], PetscDLMode, PetscDLHandle *); 136482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 136582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle, const char[], void **); 1366258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1367258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1368258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1369258ec3d2SMatthew G. Knepley #endif 13707d5d4d99SBarry Smith 13715fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1372a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void *, PetscStack **); 13735fe58b6fSBarry Smith #endif 13747eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE *, PetscBool); 1375a64a8e02SBarry Smith 1376140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList *); 1377140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList, const char[], PetscObject *); 1378140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList, PetscObject, char **, PetscBool *); 1379140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *, const char[], PetscObject); 1380140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *, const char[]); 1381140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList, PetscObjectList *); 1382d382aafbSBarry Smith 1383d382aafbSBarry Smith /* 1384503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1385d382aafbSBarry Smith link libraries that will be loaded as needed. 1386d382aafbSBarry Smith */ 1387a240a19fSJed Brown 1388a240a19fSJed Brown #define PetscFunctionListAdd(list, name, fptr) PetscFunctionListAdd_Private((list), (name), (PetscVoidFunction)(fptr)) 1389a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList *, const char[], void (*)(void)); 1390140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList *); 13911c9cd337SJed Brown #define PetscFunctionListFind(list, name, fptr) PetscFunctionListFind_Private((list), (name), (PetscVoidFunction *)(fptr)) 13921c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList, const char[], void (**)(void)); 139344ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm, FILE *, const char[], const char[], const char[], const char[], PetscFunctionList, const char[], const char[]); 1394140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList, PetscFunctionList *); 1395140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList, PetscViewer); 1396140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList, const char ***, int *); 13972e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintNonEmpty(PetscFunctionList); 13982e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintAll(void); 1399d382aafbSBarry Smith 1400014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm, PetscDLLibrary *, const char[]); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm, PetscDLLibrary *, const char[]); 1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm, PetscDLLibrary *, const char[], const char[], void **); 1404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm, const char[], char *, size_t, PetscBool *); 1406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm, const char[], PetscDLLibrary *); 1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1408d382aafbSBarry Smith 1409d382aafbSBarry Smith /* 1410d382aafbSBarry Smith Useful utility routines 1411d382aafbSBarry Smith */ 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm, PetscInt *, PetscInt *); 1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm, PetscInt, PetscInt *, PetscInt *); 1414d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm, PetscInt *, PetscInt *); 1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm, PetscMPIInt); 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm, PetscMPIInt); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE *); 141958b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm, const PetscInt[2], PetscInt[2]); 142058b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm, const PetscReal[2], PetscReal[2]); 1421d382aafbSBarry Smith 142264ac3b0dSPatrick Sanan /*MC 142387497f52SBarry Smith PetscNot - negates a logical type value and returns result as a `PetscBool` 1424503cfb0cSBarry Smith 1425e28ce29aSPatrick Sanan Notes: 1426e28ce29aSPatrick Sanan This is useful in cases like 1427503cfb0cSBarry Smith $ int *a; 1428ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 14291cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 143064ac3b0dSPatrick Sanan 143164ac3b0dSPatrick Sanan Level: beginner 143264ac3b0dSPatrick Sanan 1433db781477SPatrick Sanan .seealso `:` `PetscBool`, `PETSC_TRUE`, `PETSC_FALSE` 143464ac3b0dSPatrick Sanan M*/ 1435d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1436503cfb0cSBarry Smith 1437d382aafbSBarry Smith /*MC 1438d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1439d382aafbSBarry Smith 1440d382aafbSBarry Smith Synopsis: 1441aaa7dc30SBarry Smith #include <petscsys.h> 1442659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1443d382aafbSBarry Smith 1444659f7ba0SBarry Smith Collective on comm 1445eca87e8dSBarry Smith 1446d382aafbSBarry Smith Input Parameters: 1447659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1448d382aafbSBarry Smith . format - the usual printf() format string 1449659f7ba0SBarry Smith - args - arguments to be printed 1450d382aafbSBarry Smith 1451d382aafbSBarry Smith Level: developer 1452d382aafbSBarry Smith 1453d382aafbSBarry Smith Fortran Note: 1454d382aafbSBarry Smith This routine is not supported in Fortran. 1455d382aafbSBarry Smith 1456659f7ba0SBarry Smith Note: 1457659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1458659f7ba0SBarry Smith 1459659f7ba0SBarry Smith To use, write your own function, for example, 1460659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1461659f7ba0SBarry Smith ${ 1462659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1463659f7ba0SBarry Smith $} 1464659f7ba0SBarry Smith then do the assigment 1465659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 146687497f52SBarry Smith You can do the assignment before `PetscInitialize()`. 1467659f7ba0SBarry Smith 146887497f52SBarry Smith The default routine used is called `PetscHelpPrintfDefault()`. 1469d382aafbSBarry Smith 1470db781477SPatrick Sanan .seealso: `PetscFPrintf()`, `PetscSynchronizedPrintf()`, `PetscErrorPrintf()` 1471d382aafbSBarry Smith M*/ 14723ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1473d382aafbSBarry Smith 1474fcfd50ebSBarry Smith /* 1475fcfd50ebSBarry Smith Defines PETSc profiling. 1476fcfd50ebSBarry Smith */ 14772c8e378dSBarry Smith #include <petsclog.h> 1478fcfd50ebSBarry Smith 1479fcfd50ebSBarry Smith /* 1480fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1481fcfd50ebSBarry Smith */ 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[], char[]); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm, const char[], const char[], FILE **); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm, FILE *); 14853ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14863ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14873ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char *, size_t, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14883ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char *, size_t, const char[], size_t *, ...) PETSC_ATTRIBUTE_FORMAT(3, 5); 14891b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[], size_t, const char *, PetscInt, const PetscReal[]); 1490fcfd50ebSBarry Smith 14913ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14923ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14933ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1494d382aafbSBarry Smith 1495d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char *, size_t *); 1496d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char *, char *); 1497d781fa04SBarry Smith 1498d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm, const char[], const char[], const char[], FILE **); 1500016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm, FILE *); 150174ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1502d382aafbSBarry Smith #endif 1503d382aafbSBarry Smith 15043ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 15053ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 15060ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm, FILE *); 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm, FILE *, size_t, char[]); 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm, const char[], const char[], FILE **); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm, const char[], const char[], FILE **); 1510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char *[]); 1511d382aafbSBarry Smith 1512014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer, void **); 1514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer, void *); 1515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer *); 1516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm, PetscContainer *); 1517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void *)); 1518b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void *); 1519d382aafbSBarry Smith 1520d382aafbSBarry Smith /* 1521d382aafbSBarry Smith For use in debuggers 1522d382aafbSBarry Smith */ 1523014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1524014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt, const PetscInt[], PetscViewer); 1526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt, const PetscReal[], PetscViewer); 1527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt, const PetscScalar[], PetscViewer); 1528d382aafbSBarry Smith 1529a663daf8SBarry Smith #include <stddef.h> 1530a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1531d382aafbSBarry Smith #include <stdlib.h> 15326c7e564aSBarry Smith 15334a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1534d382aafbSBarry Smith #include <xmmintrin.h> 1535d382aafbSBarry Smith #endif 1536d382aafbSBarry Smith 1537d382aafbSBarry Smith /*@C 1538580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1539580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 154087497f52SBarry Smith take place correctly. Use `PetscMemcpy()` if the locations do not overlap 1541580bdb30SBarry Smith 1542580bdb30SBarry Smith Not Collective 1543580bdb30SBarry Smith 1544580bdb30SBarry Smith Input Parameters: 1545580bdb30SBarry Smith + b - pointer to initial memory space 1546580bdb30SBarry Smith . a - pointer to copy space 1547580bdb30SBarry Smith - n - length (in bytes) of space to copy 1548580bdb30SBarry Smith 1549580bdb30SBarry Smith Level: intermediate 1550580bdb30SBarry Smith 155187497f52SBarry Smith Notes: 155287497f52SBarry Smith `PetscArraymove()` is preferred 1553580bdb30SBarry Smith 155487497f52SBarry Smith This routine is analogous to `memmove()`. 155587497f52SBarry Smith 155687497f52SBarry Smith Developers Note: 155787497f52SBarry Smith This is inlined for performance 1558580bdb30SBarry Smith 1559db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscStrallocpy()`, 1560db781477SPatrick Sanan `PetscArraymove()` 1561580bdb30SBarry Smith @*/ 15629371c9d4SSatish Balay static inline PetscErrorCode PetscMemmove(void *a, const void *b, size_t n) { 1563580bdb30SBarry Smith PetscFunctionBegin; 15649a202e32SJacob Faibussowitsch if (n > 0) { 15652c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy to null pointer"); 15662c71b3e2SJacob Faibussowitsch PetscCheck(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy from a null pointer"); 15679a202e32SJacob Faibussowitsch } 1568580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1569580bdb30SBarry Smith if (a < b) { 1570580bdb30SBarry Smith if (a <= b - n) memcpy(a, b, n); 1571580bdb30SBarry Smith else { 1572580bdb30SBarry Smith memcpy(a, b, (int)(b - a)); 1573580bdb30SBarry Smith PetscMemmove(b, b + (int)(b - a), n - (int)(b - a)); 1574580bdb30SBarry Smith } 1575580bdb30SBarry Smith } else { 1576580bdb30SBarry Smith if (b <= a - n) memcpy(a, b, n); 1577580bdb30SBarry Smith else { 1578580bdb30SBarry Smith memcpy(b + n, b + (n - (int)(a - b)), (int)(a - b)); 1579580bdb30SBarry Smith PetscMemmove(a, b, n - (int)(a - b)); 1580580bdb30SBarry Smith } 1581580bdb30SBarry Smith } 1582580bdb30SBarry Smith #else 1583580bdb30SBarry Smith memmove((char *)(a), (char *)(b), n); 1584580bdb30SBarry Smith #endif 1585580bdb30SBarry Smith PetscFunctionReturn(0); 1586580bdb30SBarry Smith } 1587580bdb30SBarry Smith 1588d382aafbSBarry Smith /*@C 1589d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1590d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 159187497f52SBarry Smith `PetscMemmove()` in that case. 1592d382aafbSBarry Smith 1593d382aafbSBarry Smith Not Collective 1594d382aafbSBarry Smith 1595d382aafbSBarry Smith Input Parameters: 1596d382aafbSBarry Smith + b - pointer to initial memory space 1597d382aafbSBarry Smith - n - length (in bytes) of space to copy 1598d382aafbSBarry Smith 1599d382aafbSBarry Smith Output Parameter: 1600d382aafbSBarry Smith . a - pointer to copy space 1601d382aafbSBarry Smith 1602d382aafbSBarry Smith Level: intermediate 1603d382aafbSBarry Smith 1604d382aafbSBarry Smith Compile Option: 160587497f52SBarry Smith `PETSC_PREFER_DCOPY_FOR_MEMCPY` will cause the BLAS dcopy() routine to be used 1606d382aafbSBarry Smith for memory copies on double precision values. 160787497f52SBarry Smith `PETSC_PREFER_COPY_FOR_MEMCPY` will cause C code to be used 1608d382aafbSBarry Smith for memory copies on double precision values. 160987497f52SBarry Smith `PETSC_PREFER_FORTRAN_FORMEMCPY` will cause Fortran code to be used 1610d382aafbSBarry Smith for memory copies on double precision values. 1611d382aafbSBarry Smith 161287497f52SBarry Smith Notes: 161387497f52SBarry Smith Prefer `PetscArraycpy()` 161487497f52SBarry Smith 161587497f52SBarry Smith This routine is analogous to `memcpy()`. 161687497f52SBarry Smith 16171fd49c25SBarry Smith Not available from Fortran 16181fd49c25SBarry Smith 161987497f52SBarry Smith Developer Note: 162087497f52SBarry Smith This is inlined for fastest performance 1621f5f57ec0SBarry Smith 1622db781477SPatrick Sanan .seealso: `PetscMemzero()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1623d382aafbSBarry Smith 1624d382aafbSBarry Smith @*/ 16259371c9d4SSatish Balay static inline PetscErrorCode PetscMemcpy(void *a, const void *b, size_t n) { 1626d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1627c5e4d11fSDmitry Karpeev size_t al = (size_t)a, bl = (size_t)b; 1628c5e4d11fSDmitry Karpeev size_t nl = (size_t)n; 1629a7e36092SMatthew G Knepley PetscFunctionBegin; 16309a202e32SJacob Faibussowitsch if (n > 0) { 16312c71b3e2SJacob Faibussowitsch PetscCheck(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy from a null pointer"); 16322c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy to a null pointer"); 16339a202e32SJacob Faibussowitsch } 1634a7e36092SMatthew G Knepley #else 1635d382aafbSBarry Smith PetscFunctionBegin; 1636a7e36092SMatthew G Knepley #endif 1637a47a537aSLisandro Dalcin if (a != b && n > 0) { 1638d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16392c71b3e2SJacob Faibussowitsch PetscCheck(!((al > bl && (al - bl) < nl) || (bl - al) < nl), PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Memory regions overlap: either use PetscMemmov()\n\ 1640d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 16419371c9d4SSatish Balay Length (bytes) %zu first address %zu second address %zu", 16429371c9d4SSatish Balay nl, al, bl); 1643d382aafbSBarry Smith #endif 1644d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1645c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1646d382aafbSBarry Smith size_t len = n / sizeof(PetscScalar); 1647d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1648c5df96a5SBarry Smith PetscBLASInt one = 1, blen; 16499566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(len, &blen)); 1650792fecdfSBarry Smith PetscCallBLAS("BLAScopy", BLAScopy_(&blen, (PetscScalar *)b, &one, (PetscScalar *)a, &one)); 1651d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1652d382aafbSBarry Smith fortrancopy_(&len, (PetscScalar *)b, (PetscScalar *)a); 1653d382aafbSBarry Smith #else 1654d382aafbSBarry Smith PetscScalar *x = (PetscScalar *)b, *y = (PetscScalar *)a; 16555f80ce2aSJacob Faibussowitsch for (size_t i = 0; i < len; i++) y[i] = x[i]; 1656d382aafbSBarry Smith #endif 1657d382aafbSBarry Smith } else { 1658d382aafbSBarry Smith memcpy((char *)(a), (char *)(b), n); 1659d382aafbSBarry Smith } 1660d382aafbSBarry Smith #else 1661d382aafbSBarry Smith memcpy((char *)(a), (char *)(b), n); 1662d382aafbSBarry Smith #endif 1663d382aafbSBarry Smith } 1664d382aafbSBarry Smith PetscFunctionReturn(0); 1665d382aafbSBarry Smith } 1666d382aafbSBarry Smith 1667d382aafbSBarry Smith /*@C 1668d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1669d382aafbSBarry Smith 1670d382aafbSBarry Smith Not Collective 1671d382aafbSBarry Smith 1672d382aafbSBarry Smith Input Parameters: 1673d382aafbSBarry Smith + a - pointer to beginning memory location 1674d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1675d382aafbSBarry Smith 1676d382aafbSBarry Smith Level: intermediate 1677d382aafbSBarry Smith 1678d382aafbSBarry Smith Compile Option: 167987497f52SBarry Smith `PETSC_PREFER_BZERO` - on certain machines (the IBM RS6000) the bzero() routine happens 1680d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1681d382aafbSBarry Smith 168287497f52SBarry Smith Notes: 16831fd49c25SBarry Smith Not available from Fortran 16841fd49c25SBarry Smith 168587497f52SBarry Smith Prefer `PetscArrayzero()` 168687497f52SBarry Smith 168787497f52SBarry Smith Developer Note: 168887497f52SBarry Smith This is inlined for fastest performance 1689503cfb0cSBarry Smith 1690db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1691d382aafbSBarry Smith @*/ 16929371c9d4SSatish Balay static inline PetscErrorCode PetscMemzero(void *a, size_t n) { 1693d382aafbSBarry Smith if (n > 0) { 1694d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16952c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to zero at a null pointer with %zu bytes", n); 1696d382aafbSBarry Smith #endif 1697d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1698d382aafbSBarry Smith if (!(((long)a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1699d382aafbSBarry Smith size_t i, len = n / sizeof(PetscScalar); 1700d382aafbSBarry Smith PetscScalar *x = (PetscScalar *)a; 1701d382aafbSBarry Smith for (i = 0; i < len; i++) x[i] = 0.0; 1702d382aafbSBarry Smith } else { 1703d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1704d382aafbSBarry Smith if (!(((long)a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1705d382aafbSBarry Smith PetscInt len = n / sizeof(PetscScalar); 1706d382aafbSBarry Smith fortranzero_(&len, (PetscScalar *)a); 1707d382aafbSBarry Smith } else { 1708d382aafbSBarry Smith #endif 1709d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1710d382aafbSBarry Smith bzero((char *)a, n); 1711d382aafbSBarry Smith #else 1712d382aafbSBarry Smith memset((char *)a, 0, n); 1713d382aafbSBarry Smith #endif 1714d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1715d382aafbSBarry Smith } 1716d382aafbSBarry Smith #endif 1717d382aafbSBarry Smith } 1718d382aafbSBarry Smith return 0; 1719d382aafbSBarry Smith } 1720d382aafbSBarry Smith 1721d382aafbSBarry Smith /*MC 1722580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1723580bdb30SBarry Smith 1724580bdb30SBarry Smith Synopsis: 1725580bdb30SBarry Smith #include <petscsys.h> 1726580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1727580bdb30SBarry Smith 1728580bdb30SBarry Smith Not Collective 1729580bdb30SBarry Smith 1730580bdb30SBarry Smith Input Parameters: 1731580bdb30SBarry Smith + str1 - First array 1732580bdb30SBarry Smith . str2 - Second array 1733580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1734580bdb30SBarry Smith 1735580bdb30SBarry Smith Output Parameters: 173687497f52SBarry Smith . e - `PETSC_TRUE` if equal else `PETSC_FALSE`. 1737580bdb30SBarry Smith 1738580bdb30SBarry Smith Level: intermediate 1739580bdb30SBarry Smith 174087497f52SBarry Smith Notes: 174187497f52SBarry Smith This routine is a preferred replacement to `PetscMemcmp()` 174287497f52SBarry Smith 1743580bdb30SBarry Smith The arrays must be of the same type 1744580bdb30SBarry Smith 1745db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, 1746db781477SPatrick Sanan `PetscArraymove()` 1747580bdb30SBarry Smith M*/ 17489e2232c7SLisandro Dalcin #define PetscArraycmp(str1, str2, cnt, e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1, str2, (size_t)(cnt) * sizeof(*(str1)), e)) 1749580bdb30SBarry Smith 17508f8f2f0dSBarry Smith /*MC 175187497f52SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use `PetscArraycpy()` when the arrays 1752580bdb30SBarry Smith do not overlap 1753580bdb30SBarry Smith 1754580bdb30SBarry Smith Synopsis: 1755580bdb30SBarry Smith #include <petscsys.h> 1756580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1757580bdb30SBarry Smith 1758580bdb30SBarry Smith Not Collective 1759580bdb30SBarry Smith 1760580bdb30SBarry Smith Input Parameters: 1761580bdb30SBarry Smith + str1 - First array 1762580bdb30SBarry Smith . str2 - Second array 1763580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1764580bdb30SBarry Smith 1765580bdb30SBarry Smith Level: intermediate 1766580bdb30SBarry Smith 176787497f52SBarry Smith Notes: 176887497f52SBarry Smith This routine is a preferred replacement to `PetscMemmove()` 176987497f52SBarry Smith 1770580bdb30SBarry Smith The arrays must be of the same type 1771580bdb30SBarry Smith 1772db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1773580bdb30SBarry Smith M*/ 17749e2232c7SLisandro Dalcin #define PetscArraymove(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1, str2, (size_t)(cnt) * sizeof(*(str1)))) 1775580bdb30SBarry Smith 17768f8f2f0dSBarry Smith /*MC 1777580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1778580bdb30SBarry Smith 1779580bdb30SBarry Smith Synopsis: 1780580bdb30SBarry Smith #include <petscsys.h> 1781580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1782580bdb30SBarry Smith 1783580bdb30SBarry Smith Not Collective 1784580bdb30SBarry Smith 1785580bdb30SBarry Smith Input Parameters: 1786de25709eSStefano Zampini + str1 - First array (destination) 1787de25709eSStefano Zampini . str2 - Second array (source) 1788580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1789580bdb30SBarry Smith 1790580bdb30SBarry Smith Level: intermediate 1791580bdb30SBarry Smith 179287497f52SBarry Smith Notes: 179387497f52SBarry Smith This routine is a preferred replacement to `PetscMemcpy()` 179487497f52SBarry Smith 1795580bdb30SBarry Smith The arrays must be of the same type 1796580bdb30SBarry Smith 1797db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraymove()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1798580bdb30SBarry Smith M*/ 17999e2232c7SLisandro Dalcin #define PetscArraycpy(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1, str2, (size_t)(cnt) * sizeof(*(str1)))) 1800580bdb30SBarry Smith 18018f8f2f0dSBarry Smith /*MC 1802580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1803580bdb30SBarry Smith 1804580bdb30SBarry Smith Synopsis: 1805580bdb30SBarry Smith #include <petscsys.h> 1806580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1807580bdb30SBarry Smith 1808580bdb30SBarry Smith Not Collective 1809580bdb30SBarry Smith 1810580bdb30SBarry Smith Input Parameters: 1811580bdb30SBarry Smith + str1 - array 1812580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1813580bdb30SBarry Smith 1814580bdb30SBarry Smith Level: intermediate 1815580bdb30SBarry Smith 1816580bdb30SBarry Smith Note: 181787497f52SBarry Smith This routine is a preferred replacement to `PetscMemzero()` 1818580bdb30SBarry Smith 1819db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, `PetscArraymove()` 1820580bdb30SBarry Smith M*/ 18219e2232c7SLisandro Dalcin #define PetscArrayzero(str1, cnt) PetscMemzero(str1, (size_t)(cnt) * sizeof(*(str1))) 1822580bdb30SBarry Smith 1823d382aafbSBarry Smith /*MC 1824d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1825d382aafbSBarry Smith 1826eca87e8dSBarry Smith Synopsis: 1827aaa7dc30SBarry Smith #include <petscsys.h> 1828eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1829eca87e8dSBarry Smith 1830d382aafbSBarry Smith Not Collective 1831d382aafbSBarry Smith 1832d382aafbSBarry Smith Input Parameters: 1833d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1834d382aafbSBarry Smith . n - number of elements to fetch 1835d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 183650d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1837d382aafbSBarry Smith 1838d382aafbSBarry Smith Level: developer 1839d382aafbSBarry Smith 1840d382aafbSBarry Smith Notes: 1841d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1842d382aafbSBarry Smith 184350d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 184450d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 184587497f52SBarry Smith + `PETSC_PREFETCH_HINT_NTA` - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 184687497f52SBarry Smith . `PETSC_PREFETCH_HINT_T0` - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 184787497f52SBarry Smith . `PETSC_PREFETCH_HINT_T1` - Fetch to level 2 and higher (not L1). 184887497f52SBarry Smith - `PETSC_PREFETCH_HINT_T2` - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1849d382aafbSBarry Smith 1850d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1851d382aafbSBarry Smith address). 1852d382aafbSBarry Smith 1853d382aafbSBarry Smith M*/ 18549371c9d4SSatish Balay #define PetscPrefetchBlock(a, n, rw, t) \ 18559371c9d4SSatish Balay do { \ 1856d382aafbSBarry Smith const char *_p = (const char *)(a), *_end = (const char *)((a) + (n)); \ 1857d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p, (rw), (t)); \ 1858d382aafbSBarry Smith } while (0) 1859d382aafbSBarry Smith 1860d382aafbSBarry Smith /* 1861d382aafbSBarry Smith Determine if some of the kernel computation routines use 1862d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1863d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1864d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1865e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1866d382aafbSBarry Smith */ 1867d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1868d382aafbSBarry Smith 1869d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1870d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1871d382aafbSBarry Smith #endif 1872d382aafbSBarry Smith 18735a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18745a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1875d382aafbSBarry Smith #endif 1876d382aafbSBarry Smith 1877d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1878d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1879d382aafbSBarry Smith #endif 1880d382aafbSBarry Smith 1881d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1882d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1883d382aafbSBarry Smith #endif 1884d382aafbSBarry Smith 1885d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1886d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1887d382aafbSBarry Smith #endif 1888d382aafbSBarry Smith 1889d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1890d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1891d382aafbSBarry Smith #endif 1892d382aafbSBarry Smith 1893d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1894d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1895d382aafbSBarry Smith #endif 1896d382aafbSBarry Smith 1897d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1898d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1899d382aafbSBarry Smith #endif 1900d382aafbSBarry Smith 1901d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1902d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1903d382aafbSBarry Smith #endif 1904d382aafbSBarry Smith 1905d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1906d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1907d382aafbSBarry Smith #endif 1908d382aafbSBarry Smith 1909d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1910d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1911d382aafbSBarry Smith #endif 1912d382aafbSBarry Smith 1913d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1914d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1915d382aafbSBarry Smith #endif 1916d382aafbSBarry Smith 1917d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1918d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1919d382aafbSBarry Smith #endif 1920d382aafbSBarry Smith 1921d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1922d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1923d382aafbSBarry Smith #endif 1924d382aafbSBarry Smith 1925d382aafbSBarry Smith #endif 1926d382aafbSBarry Smith 1927d382aafbSBarry Smith /* 1928d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1929d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1930d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1931d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1932d382aafbSBarry Smith ugly extern "C" {} wrappers. 1933d382aafbSBarry Smith */ 1934d382aafbSBarry Smith #if defined(__cplusplus) 1935d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1936d382aafbSBarry Smith #define EXTERN_C_END } 1937d382aafbSBarry Smith #else 1938d382aafbSBarry Smith #define EXTERN_C_BEGIN 1939d382aafbSBarry Smith #define EXTERN_C_END 1940d382aafbSBarry Smith #endif 1941d382aafbSBarry Smith 1942d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1943d382aafbSBarry Smith 1944d382aafbSBarry Smith /*MC 1945d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1946d382aafbSBarry Smith communication 1947d382aafbSBarry Smith 1948d382aafbSBarry Smith Level: beginner 1949d382aafbSBarry Smith 1950d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1951d382aafbSBarry Smith 1952db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`, `PETSC_COMM_SELF` 1953d382aafbSBarry Smith M*/ 1954d382aafbSBarry Smith 1955d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1956014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *); 1957014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *); 1958c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *); 1959c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *); 1960c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *); 1961c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *); 1962d382aafbSBarry Smith #endif 1963d382aafbSBarry Smith 1964d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1965d382aafbSBarry Smith 1966d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1967d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1968d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1969d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1970d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1971d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1972eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 1973d382aafbSBarry Smith 197461b0d812SBarry Smith /*@C 197587497f52SBarry Smith PetscIntCast - casts a `PetscInt64` (which is 64 bits in size) to a `PetscInt` (which may be 32 bits in size), generates an 197687497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1977c73702f5SBarry Smith 1978c73702f5SBarry Smith Not Collective 1979c73702f5SBarry Smith 1980c73702f5SBarry Smith Input Parameter: 198187497f52SBarry Smith . a - the `PetscInt64` value 1982c73702f5SBarry Smith 1983c73702f5SBarry Smith Output Parameter: 198487497f52SBarry Smith . b - the resulting `PetscInt` value 1985c73702f5SBarry Smith 1986c73702f5SBarry Smith Level: advanced 1987c73702f5SBarry Smith 198887497f52SBarry Smith Notes: 198987497f52SBarry Smith If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make `PetscInt` use 64 bit ints 1990c73702f5SBarry Smith 1991c73702f5SBarry Smith Not available from Fortran 1992c73702f5SBarry Smith 1993db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()` 1994c73702f5SBarry Smith @*/ 19959371c9d4SSatish Balay static inline PetscErrorCode PetscIntCast(PetscInt64 a, PetscInt *b) { 1996c73702f5SBarry Smith PetscFunctionBegin; 1997c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 19983ca90d2dSJacob Faibussowitsch if (a > PETSC_MAX_INT) { 19993ca90d2dSJacob Faibussowitsch *b = 0; 200098921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 20013ca90d2dSJacob Faibussowitsch } 2002c73702f5SBarry Smith #endif 2003c73702f5SBarry Smith *b = (PetscInt)(a); 2004c73702f5SBarry Smith PetscFunctionReturn(0); 2005c73702f5SBarry Smith } 2006c73702f5SBarry Smith 2007c73702f5SBarry Smith /*@C 200887497f52SBarry Smith PetscCountCast - casts a `PetscCount` to a `PetscInt` (which may be 32 bits in size), generates an 200987497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 2010981bb840SJunchao Zhang 2011981bb840SJunchao Zhang Not Collective 2012981bb840SJunchao Zhang 2013981bb840SJunchao Zhang Input Parameter: 201487497f52SBarry Smith . a - the `PetscCount` value 2015981bb840SJunchao Zhang 2016981bb840SJunchao Zhang Output Parameter: 201787497f52SBarry Smith . b - the resulting `PetscInt` value 2018981bb840SJunchao Zhang 2019981bb840SJunchao Zhang Level: advanced 2020981bb840SJunchao Zhang 2021981bb840SJunchao Zhang Notes: 2022981bb840SJunchao Zhang If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2023981bb840SJunchao Zhang 2024981bb840SJunchao Zhang Not available from Fortran 2025981bb840SJunchao Zhang 2026db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`, `PetscIntCast()` 2027981bb840SJunchao Zhang @*/ 20289371c9d4SSatish Balay static inline PetscErrorCode PetscCountCast(PetscCount a, PetscInt *b) { 2029981bb840SJunchao Zhang PetscFunctionBegin; 2030981bb840SJunchao Zhang if (sizeof(PetscCount) > sizeof(PetscInt) && a > PETSC_MAX_INT) { 2031981bb840SJunchao Zhang *b = 0; 2032981bb840SJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 2033981bb840SJunchao Zhang } 2034981bb840SJunchao Zhang *b = (PetscInt)(a); 2035981bb840SJunchao Zhang PetscFunctionReturn(0); 2036981bb840SJunchao Zhang } 2037981bb840SJunchao Zhang 2038981bb840SJunchao Zhang /*@C 203987497f52SBarry Smith PetscBLASIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscBLASInt` (which may be 32 bits in size), generates an 204087497f52SBarry Smith error if the `PetscBLASInt` is not large enough to hold the number. 204161b0d812SBarry Smith 204261b0d812SBarry Smith Not Collective 204361b0d812SBarry Smith 204461b0d812SBarry Smith Input Parameter: 204587497f52SBarry Smith . a - the `PetscInt` value 204661b0d812SBarry Smith 204761b0d812SBarry Smith Output Parameter: 204887497f52SBarry Smith . b - the resulting `PetscBLASInt` value 204961b0d812SBarry Smith 205061b0d812SBarry Smith Level: advanced 205161b0d812SBarry Smith 20520bc7d38cSBarry Smith Notes: 20531fd49c25SBarry Smith Not available from Fortran 205487497f52SBarry Smith 2055f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 20561fd49c25SBarry Smith 2057db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscIntCast()`, `PetscCountCast()` 205861b0d812SBarry Smith @*/ 20599371c9d4SSatish Balay static inline PetscErrorCode PetscBLASIntCast(PetscInt a, PetscBLASInt *b) { 2060c5df96a5SBarry Smith PetscFunctionBegin; 206154c59aa7SJacob Faibussowitsch *b = 0; 206254c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) { 206354c59aa7SJacob Faibussowitsch PetscCheck(a <= PETSC_BLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running", a); 206454c59aa7SJacob Faibussowitsch } 206554c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to BLAS/LAPACK routine"); 2066c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2067c5df96a5SBarry Smith PetscFunctionReturn(0); 2068c5df96a5SBarry Smith } 2069c5df96a5SBarry Smith 207061b0d812SBarry Smith /*@C 207187497f52SBarry Smith PetscCuBLASIntCast - like `PetscBLASIntCast()`, but for `PetscCuBLASInt`. 2072eee0c0a6SToby Isaac 2073eee0c0a6SToby Isaac Not Collective 2074eee0c0a6SToby Isaac 2075eee0c0a6SToby Isaac Input Parameter: 207687497f52SBarry Smith . a - the `PetscInt` value 2077eee0c0a6SToby Isaac 2078eee0c0a6SToby Isaac Output Parameter: 207987497f52SBarry Smith . b - the resulting `PetscCuBLASInt` value 2080eee0c0a6SToby Isaac 2081eee0c0a6SToby Isaac Level: advanced 2082eee0c0a6SToby Isaac 2083eee0c0a6SToby Isaac Notes: 2084eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2085eee0c0a6SToby Isaac 2086db781477SPatrick Sanan .seealso: `PetscCuBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 2087eee0c0a6SToby Isaac @*/ 20889371c9d4SSatish Balay static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a, PetscCuBLASInt *b) { 2089eee0c0a6SToby Isaac PetscFunctionBegin; 209054c59aa7SJacob Faibussowitsch *b = 0; 209154c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_CUBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32 bit integers.", a); 209254c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to cuBLAS routine"); 2093eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2094eee0c0a6SToby Isaac PetscFunctionReturn(0); 2095eee0c0a6SToby Isaac } 2096eee0c0a6SToby Isaac 2097eee0c0a6SToby Isaac /*@C 209887497f52SBarry Smith PetscMPIIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscMPIInt` (which may be 32 bits in size), generates an 209987497f52SBarry Smith error if the `PetscMPIInt` is not large enough to hold the number. 210061b0d812SBarry Smith 210161b0d812SBarry Smith Not Collective 210261b0d812SBarry Smith 210361b0d812SBarry Smith Input Parameter: 210487497f52SBarry Smith . a - the `PetscInt` value 210561b0d812SBarry Smith 210661b0d812SBarry Smith Output Parameter: 210787497f52SBarry Smith . b - the resulting `PetscMPIInt` value 210861b0d812SBarry Smith 210961b0d812SBarry Smith Level: advanced 211061b0d812SBarry Smith 21111fd49c25SBarry Smith Not available from Fortran 21121fd49c25SBarry Smith 2113db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntCast()` 211461b0d812SBarry Smith @*/ 21159371c9d4SSatish Balay static inline PetscErrorCode PetscMPIIntCast(PetscInt a, PetscMPIInt *b) { 21164dc2109aSBarry Smith PetscFunctionBegin; 211754c59aa7SJacob Faibussowitsch *b = 0; 211854c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_MPI_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for MPI buffer length. We currently only support 32 bit integers", a); 2119c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21204dc2109aSBarry Smith PetscFunctionReturn(0); 21214dc2109aSBarry Smith } 21224dc2109aSBarry Smith 2123bafee8b4SSatish Balay #define PetscInt64Mult(a, b) ((PetscInt64)(a)) * ((PetscInt64)(b)) 21242f18eb33SBarry Smith 21252f18eb33SBarry Smith /*@C 21262f18eb33SBarry Smith 212787497f52SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive `PetscReal` and a positive `PetscInt` and truncates the value to slightly less than the maximal possible value 21282f18eb33SBarry Smith 21292f18eb33SBarry Smith Not Collective 21302f18eb33SBarry Smith 2131d8d19677SJose E. Roman Input Parameters: 213287497f52SBarry Smith + a - the `PetscReal` value 21332f18eb33SBarry Smith - b - the second value 21342f18eb33SBarry Smith 2135390e1bf2SBarry Smith Returns: 213687497f52SBarry Smith the result as a `PetscInt` value 21372f18eb33SBarry Smith 213887497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 213987497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two positive `PetscInt` and truncate to fit a `PetscInt` 214087497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 21412f18eb33SBarry Smith 2142e28ce29aSPatrick Sanan Developers Note: 214387497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 21442f18eb33SBarry Smith 21452f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21462f18eb33SBarry Smith 21471fd49c25SBarry Smith Not available from Fortran 21481fd49c25SBarry Smith 21492f18eb33SBarry Smith Level: advanced 21502f18eb33SBarry Smith 2151db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21522f18eb33SBarry Smith @*/ 21539371c9d4SSatish Balay static inline PetscInt PetscRealIntMultTruncate(PetscReal a, PetscInt b) { 21545f80ce2aSJacob Faibussowitsch PetscInt64 r = (PetscInt64)(a * (PetscReal)b); 21552f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21562f18eb33SBarry Smith return (PetscInt)r; 21572f18eb33SBarry Smith } 21582f18eb33SBarry Smith 21592f18eb33SBarry Smith /*@C 21602f18eb33SBarry Smith 216187497f52SBarry Smith PetscIntMultTruncate - Computes the product of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 21622f18eb33SBarry Smith 21632f18eb33SBarry Smith Not Collective 21642f18eb33SBarry Smith 2165d8d19677SJose E. Roman Input Parameters: 21662f18eb33SBarry Smith + a - the PetscInt value 21672f18eb33SBarry Smith - b - the second value 21682f18eb33SBarry Smith 2169390e1bf2SBarry Smith Returns: 217087497f52SBarry Smith the result as a `PetscInt` value 21712f18eb33SBarry Smith 217287497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 217387497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 217487497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 21752f18eb33SBarry Smith 21761fd49c25SBarry Smith Not available from Fortran 21771fd49c25SBarry Smith 217887497f52SBarry Smith Developers Note: 217987497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 21802f18eb33SBarry Smith 21812f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21822f18eb33SBarry Smith 21832f18eb33SBarry Smith Level: advanced 21842f18eb33SBarry Smith 2185db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21862f18eb33SBarry Smith @*/ 21879371c9d4SSatish Balay static inline PetscInt PetscIntMultTruncate(PetscInt a, PetscInt b) { 21885f80ce2aSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 21892f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21902f18eb33SBarry Smith return (PetscInt)r; 21912f18eb33SBarry Smith } 21922f18eb33SBarry Smith 2193f91af8c7SBarry Smith /*@C 2194f91af8c7SBarry Smith 219587497f52SBarry Smith PetscIntSumTruncate - Computes the sum of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 2196f91af8c7SBarry Smith 2197f91af8c7SBarry Smith Not Collective 2198f91af8c7SBarry Smith 2199d8d19677SJose E. Roman Input Parameters: 220087497f52SBarry Smith + a - the `PetscInt` value 2201f91af8c7SBarry Smith - b - the second value 2202f91af8c7SBarry Smith 2203390e1bf2SBarry Smith Returns: 220487497f52SBarry Smith the result as a `PetscInt` value 2205f91af8c7SBarry Smith 220687497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 220787497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 220887497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 2209f91af8c7SBarry Smith 2210f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2211f91af8c7SBarry Smith 2212f5f57ec0SBarry Smith Not available from Fortran 2213f5f57ec0SBarry Smith 2214f91af8c7SBarry Smith Level: advanced 2215f91af8c7SBarry Smith 2216db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2217f91af8c7SBarry Smith @*/ 22189371c9d4SSatish Balay static inline PetscInt PetscIntSumTruncate(PetscInt a, PetscInt b) { 22195f80ce2aSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 2220f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2221f91af8c7SBarry Smith return (PetscInt)r; 2222f91af8c7SBarry Smith } 2223f91af8c7SBarry Smith 22242f18eb33SBarry Smith /*@C 22252f18eb33SBarry Smith 222687497f52SBarry Smith PetscIntMultError - Computes the product of two positive `PetscInt` and generates an error with overflow. 22272f18eb33SBarry Smith 22282f18eb33SBarry Smith Not Collective 22292f18eb33SBarry Smith 2230d8d19677SJose E. Roman Input Parameters: 223187497f52SBarry Smith + a - the `PetscInt` value 22322f18eb33SBarry Smith - b - the second value 22332f18eb33SBarry Smith 2234d8d19677SJose E. Roman Output Parameter: 223587497f52SBarry Smith . result - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 22362f18eb33SBarry Smith 223787497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` and store in a `PetscInt64` 223887497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 22392f18eb33SBarry Smith 2240f5f57ec0SBarry Smith Not available from Fortran 2241f5f57ec0SBarry Smith 224287497f52SBarry Smith Developers Note: 224387497f52SBarry Smith We currently assume that `PetscInt` addition does not overflow, this is obviously wrong but requires many more checks. 22442f18eb33SBarry Smith 22452f18eb33SBarry Smith Level: advanced 22462f18eb33SBarry Smith 2247db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntMult64()`, `PetscIntSumError()` 22482f18eb33SBarry Smith @*/ 22499371c9d4SSatish Balay static inline PetscErrorCode PetscIntMultError(PetscInt a, PetscInt b, PetscInt *result) { 2250bafee8b4SSatish Balay PetscInt64 r; 22512f18eb33SBarry Smith 22522f18eb33SBarry Smith PetscFunctionBegin; 2253bafee8b4SSatish Balay r = PetscInt64Mult(a, b); 22542f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22552c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 22562f18eb33SBarry Smith #endif 2257f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 2258f91af8c7SBarry Smith PetscFunctionReturn(0); 2259f91af8c7SBarry Smith } 2260f91af8c7SBarry Smith 2261f91af8c7SBarry Smith /*@C 2262f91af8c7SBarry Smith 226387497f52SBarry Smith PetscIntSumError - Computes the sum of two positive `PetscInt` and generates an error with overflow. 2264f91af8c7SBarry Smith 2265f91af8c7SBarry Smith Not Collective 2266f91af8c7SBarry Smith 2267d8d19677SJose E. Roman Input Parameters: 226887497f52SBarry Smith + a - the `PetscInt` value 2269f91af8c7SBarry Smith - b - the second value 2270f91af8c7SBarry Smith 2271d8d19677SJose E. Roman Output Parameter: 227287497f52SBarry Smith . c - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 2273f91af8c7SBarry Smith 227487497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two 32 bit PetscInt and store in a `PetscInt64` 227587497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 2276f91af8c7SBarry Smith 2277f5f57ec0SBarry Smith Not available from Fortran 2278f5f57ec0SBarry Smith 2279f91af8c7SBarry Smith Level: advanced 2280f91af8c7SBarry Smith 2281db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2282f91af8c7SBarry Smith @*/ 22839371c9d4SSatish Balay static inline PetscErrorCode PetscIntSumError(PetscInt a, PetscInt b, PetscInt *result) { 2284bafee8b4SSatish Balay PetscInt64 r; 2285f91af8c7SBarry Smith 2286f91af8c7SBarry Smith PetscFunctionBegin; 2287bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2288f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22892c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 2290f91af8c7SBarry Smith #endif 2291f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 22922f18eb33SBarry Smith PetscFunctionReturn(0); 22932f18eb33SBarry Smith } 2294c5df96a5SBarry Smith 2295d382aafbSBarry Smith /* 22962981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2297d382aafbSBarry Smith */ 2298d382aafbSBarry Smith #if defined(hz) 2299d382aafbSBarry Smith #undef hz 2300d382aafbSBarry Smith #endif 2301d382aafbSBarry Smith 230215a5570dSLisandro Dalcin #include <limits.h> 230315a5570dSLisandro Dalcin 230415a5570dSLisandro Dalcin /* The number of bits in a byte */ 230515a5570dSLisandro Dalcin 230615a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 230715a5570dSLisandro Dalcin 2308d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2309d382aafbSBarry Smith #include <sys/types.h> 2310d382aafbSBarry Smith #endif 2311d382aafbSBarry Smith 2312d382aafbSBarry Smith /*MC 2313d382aafbSBarry Smith 231466d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 231566d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 231666d79e26SBarry Smith 231766d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 231866d79e26SBarry Smith 231966d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 232066d79e26SBarry Smith 232166d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 232266d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 232366d79e26SBarry Smith 232466d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 232566d79e26SBarry Smith 232666d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 232766d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 232866d79e26SBarry Smith version number (x.y.z). 232966d79e26SBarry Smith 233087497f52SBarry Smith `PETSC_RELEASE_DATE` is the date the x.y version was released (i.e. the version before any patch releases) 233166d79e26SBarry Smith 233287497f52SBarry Smith `PETSC_VERSION_DATE` is the date the x.y.z version was released 233366d79e26SBarry Smith 233487497f52SBarry Smith `PETSC_VERSION_GIT` is the last git commit to the repository given in the form vx.y.z-wwwww 233566d79e26SBarry Smith 233687497f52SBarry Smith `PETSC_VERSION_DATE_GIT` is the date of the last git commit to the repository 233766d79e26SBarry Smith 233887497f52SBarry Smith `PETSC_VERSION_()` is deprecated and will eventually be removed. 233966d79e26SBarry Smith 2340cbc12506SBarry Smith Level: intermediate 234166d79e26SBarry Smith 234266d79e26SBarry Smith M*/ 234366d79e26SBarry Smith 2344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[], size_t); 2345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[], size_t); 2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[], size_t); 2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[], size_t); 2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[], size_t); 235027710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 23515f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt *, PetscInt *, PetscInt *, PetscInt *); 2352d382aafbSBarry Smith 23536a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt, const PetscInt[], PetscBool *); 23546a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt, const PetscMPIInt[], PetscBool *); 23556a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt, const PetscReal[], PetscBool *); 2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt, PetscInt[]); 2357ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt, PetscInt[]); 235822ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt *, PetscInt[]); 2359b6a18d21SVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 2360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt *, PetscInt[]); 2361f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 236260e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt *); 2363d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt *); 2364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt, const PetscInt[], PetscInt[]); 2365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt, const char *[], PetscInt[]); 2366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt, PetscInt[], PetscInt[]); 2367981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount, PetscInt[], PetscCount[]); 23686c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt, PetscInt[], PetscInt[], PetscInt[]); 2369981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount, PetscInt[], PetscInt[], PetscCount[]); 237017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt, PetscMPIInt[]); 237117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt *, PetscMPIInt[]); 2372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt, PetscMPIInt[], PetscMPIInt[]); 23735569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt, PetscMPIInt[], PetscInt[]); 2374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt, PetscInt[], PetscScalar[]); 237517df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt, PetscInt[], void *, size_t, void *); 2376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt, PetscReal[]); 237739f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt, const PetscReal[], PetscInt[]); 2379745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt *, PetscReal[]); 238039f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal, PetscInt, const PetscReal[], PetscReal, PetscInt *); 2381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt, PetscInt, PetscScalar[], PetscInt[]); 2382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt, PetscInt, PetscReal[], PetscInt[]); 2383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt, const PetscBool[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **, PetscInt **, PetscInt **); 23846c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt, const PetscInt[], const PetscInt[], PetscInt, const PetscInt[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **); 23856c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscInt *, PetscInt **); 2386e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt, const PetscMPIInt[], PetscInt, const PetscMPIInt[], PetscInt *, PetscMPIInt **); 2387ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2388ce605777SToby Isaac 23894d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt, void *, size_t, int (*)(const void *, const void *, void *), void *); 2390676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt, PetscInt[]); 2391676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt, PetscMPIInt[]); 2392676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt, PetscReal[]); 23934d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt, void *, size_t, void *, size_t, int (*)(const void *, const void *, void *), void *); 2394676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt, PetscInt[], PetscInt[]); 2395676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt, PetscMPIInt[], PetscMPIInt[]); 2396676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2397676f2a66SJacob Faibussowitsch 2398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[], size_t); 2400d382aafbSBarry Smith 240176bdecfbSBarry Smith /*J 2402d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2403d382aafbSBarry Smith 2404d382aafbSBarry Smith Level: beginner 2405d382aafbSBarry Smith 2406e28ce29aSPatrick Sanan Notes: 240787497f52SBarry Smith To use `PETSCSPRNG` or `PETSCRANDOM123` you must have ./configure PETSc 240825ccb61fSToby Isaac with the option --download-sprng or --download-random123 2409d382aafbSBarry Smith 2410db781477SPatrick Sanan .seealso: `PetscRandomSetType()`, `PetscRandom`, `PetscRandomCreate()` 241176bdecfbSBarry Smith J*/ 241219fd82e9SBarry Smith typedef const char *PetscRandomType; 2413d382aafbSBarry Smith #define PETSCRAND "rand" 2414d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2415d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2416c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 241725ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2418808ba619SStefano Zampini #define PETSCCURAND "curand" 2419d382aafbSBarry Smith 2420d382aafbSBarry Smith /* Logging support */ 2421014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2422d382aafbSBarry Smith 2423607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2424d382aafbSBarry Smith 2425d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2426140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2427d382aafbSBarry Smith 2428bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[], PetscErrorCode (*)(PetscRandom)); 242919fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 243119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType *); 2432fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom, PetscObject, const char[]); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom, PetscViewer); 2434d382aafbSBarry Smith 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm, PetscRandom *); 2436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom, PetscScalar *); 2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom, PetscReal *); 2438808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom, PetscInt, PetscScalar *); 2439808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom, PetscInt, PetscReal *); 2440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom, PetscScalar *, PetscScalar *); 2441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom, PetscScalar, PetscScalar); 2442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom, unsigned long); 2443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom, unsigned long *); 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom *); 2446d382aafbSBarry Smith 2447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[], char[], size_t); 2448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[], char[], size_t); 2449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[], size_t); 2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[], char[]); 2451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[], size_t); 2452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[], char, PetscBool *); 2453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[], char, PetscBool *); 245497540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24558a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 245697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2457d382aafbSBarry Smith 24589371c9d4SSatish Balay static inline PetscBool PetscBinaryBigEndian(void) { 24599371c9d4SSatish Balay long _petsc_v = 1; 24609371c9d4SSatish Balay return ((char *)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE; 24619371c9d4SSatish Balay } 246230815ce0SLisandro Dalcin 24639860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int, void *, PetscInt, PetscInt *, PetscDataType); 24649860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm, int, void *, PetscInt, PetscInt *, PetscDataType); 2465f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int, const void *, PetscInt, PetscDataType); 2466f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm, int, const void *, PetscInt, PetscDataType); 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[], PetscFileMode, int *); 2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm, PetscBool *); 2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm, PetscBool *); 2471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm, char[], size_t); 2472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm, const char[], char[], size_t, PetscBool *); 2473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm, const char[], char[], size_t, PetscBool *); 2474c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2475e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[], int, int *); 2476c891a504SStefano Zampini #endif 2477d382aafbSBarry Smith 2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int, off_t, PetscBinarySeekType, off_t *); 2479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm, int, off_t, PetscBinarySeekType, off_t *); 2480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *, PetscDataType, PetscInt); 2481d382aafbSBarry Smith 2482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[], PetscBool); 2484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char *); 2486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 24882a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2489d382aafbSBarry Smith 2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt *); 2491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **); 2492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **, PetscMPIInt **); 2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscInt ***, MPI_Request **); 2494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscScalar ***, MPI_Request **); 24959371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt *, const void *, PetscMPIInt *, PetscMPIInt **, void *) PetscAttrMPIPointerWithType(6, 3); 24969371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PetscAttrMPIPointerWithType(6, 3); 24979371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, MPI_Request **, MPI_Request **, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PetscAttrMPIPointerWithType(6, 3); 2498d382aafbSBarry Smith 24996145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 25006145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm, PetscBuildTwoSidedType); 25016145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm, PetscBuildTwoSidedType *); 25026145cd65SJed Brown 2503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm, PetscBool *, PetscBool *); 2504d382aafbSBarry Smith 2505ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2506ce94432eSBarry Smith 250745487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 250845487dadSJed Brown 2509d382aafbSBarry Smith struct _n_PetscSubcomm { 2510d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2511d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2512306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 251345487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 251445487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2515708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 251645487dadSJed Brown PetscSubcommType type; 2517e5acf8a4SHong Zhang char *subcommprefix; 2518d382aafbSBarry Smith }; 2519d382aafbSBarry Smith 25209371c9d4SSatish Balay static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) { 25219371c9d4SSatish Balay return scomm->parent; 25229371c9d4SSatish Balay } 25239371c9d4SSatish Balay static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) { 25249371c9d4SSatish Balay return scomm->child; 25259371c9d4SSatish Balay } 25269371c9d4SSatish Balay static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) { 25279371c9d4SSatish Balay return scomm->dupparent; 25289371c9d4SSatish Balay } 2529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm, PetscSubcomm *); 2530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm *); 2531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm, PetscInt); 2532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm, PetscSubcommType); 253365d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm, PetscMPIInt, PetscMPIInt); 2534053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm, PetscViewer); 2535f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2536e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm, const char[]); 2537a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm, MPI_Comm *); 2538a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm, MPI_Comm *); 2539a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm, MPI_Comm *); 2540d382aafbSBarry Smith 25419962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt, PetscHeap *); 25429962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap, PetscInt, PetscInt); 25439962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap, PetscInt *, PetscInt *); 25449962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap, PetscInt *, PetscInt *); 25459962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap, PetscInt, PetscInt); 25469962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25479962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap *); 25489962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap, PetscViewer); 25499962606eSBarry Smith 25505e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25515f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm, PetscShmComm *); 25525f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25535f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25545f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm, MPI_Comm *); 25555e71baefSBarry Smith 2556a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2557a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm, PetscInt, PetscOmpCtrl *); 2558a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl, MPI_Comm *, MPI_Comm *, PetscBool *); 2559a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl *); 2560a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2561a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2562a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2563a32e93adSJunchao Zhang 256413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t, size_t, PetscSegBuffer *); 25650f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer *); 256613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer, size_t, void *); 2567137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer, void *); 2568137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer, void *); 2569137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer, void *); 257013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer, size_t *); 257113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer, size_t); 25720f453b92SJed Brown 2573471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2574471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2575471ecdacSJed Brown * possible. */ 25769371c9d4SSatish Balay static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg, size_t count, PetscInt *PETSC_RESTRICT *slot) { 25779371c9d4SSatish Balay return PetscSegBufferGet(seg, count, (void **)slot); 25789371c9d4SSatish Balay } 2579d382aafbSBarry Smith 25809de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 25819de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted *); 25829de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted *); 25839de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted, const char *, const char *, PetscBool *); 25849de0f6ecSBarry Smith 2585ace2fbaeSBarry Smith #include <stdarg.h> 2586ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char *, size_t, const char[], size_t *, va_list); 2587ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE *, const char[], va_list); 2588ace2fbaeSBarry Smith 2589268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2590fbfcfee5SBarry Smith 25911f817a21SBarry Smith /*@C 25921f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 25931f817a21SBarry Smith 259487497f52SBarry Smith Not Collective - only what is registered on rank 0 of `PETSC_COMM_WORLD` will be printed 25951f817a21SBarry Smith 25961f817a21SBarry Smith Input Parameters: 25971f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 259887497f52SBarry Smith - set - a boolean variable initially set to `PETSC_FALSE`; this is used to insure only a single registration of the citation 25991f817a21SBarry Smith 2600850545d0SSatish Balay Level: intermediate 2601850545d0SSatish Balay 2602f5f57ec0SBarry Smith Not available from Fortran 2603f5f57ec0SBarry Smith 26041f817a21SBarry Smith Options Database: 2605063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 26061f817a21SBarry Smith @*/ 26079371c9d4SSatish Balay static inline PetscErrorCode PetscCitationsRegister(const char cit[], PetscBool *set) { 2608dff31646SBarry Smith size_t len; 2609dff31646SBarry Smith char *vstring; 2610dff31646SBarry Smith 26111f817a21SBarry Smith PetscFunctionBegin; 26128d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 26139566063dSJacob Faibussowitsch PetscCall(PetscStrlen(cit, &len)); 26149566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(PetscCitationsList, len, &vstring)); 26159566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(vstring, cit, len)); 2616dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26171f817a21SBarry Smith PetscFunctionReturn(0); 2618dff31646SBarry Smith } 2619dff31646SBarry Smith 2620d8174014SToby Isaac PETSC_EXTERN PETSC_DEPRECATED_FUNCTION("Google has discontinued its URL shortener service") PetscErrorCode PetscURLShorten(const char[], char[], size_t c); 2621fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm, char[], char[], size_t); 2622fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm, const char[], char[], size_t); 2623f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm, const char[], const char[]); 2624fe278a28SBarry Smith 2625f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm, char[], char[], size_t); 2626f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm, const char[], char[], char[], size_t); 2627b967cddfSBarry Smith 26289f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm, const char[], char[], size_t); 26299f4d3c52SBarry Smith 263004102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm, const char[], const char[], PetscBool *); 2631763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm, const char[], const char[], PetscBool *); 2632dff31646SBarry Smith 263368e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[], const char[], char[], size_t, PetscBool *); 26345dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[], const char[], const char[], size_t); 2635d382aafbSBarry Smith 2636b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 26379371c9d4SSatish Balay static inline unsigned int PetscStrHash(const char *str) { 2638df05ca09SBarry Smith unsigned int c, hash = 5381; 2639df05ca09SBarry Smith 2640503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2641df05ca09SBarry Smith return hash; 2642df05ca09SBarry Smith } 264377a5e07dSBarry Smith 264477a5e07dSBarry Smith /*MC 264587497f52SBarry Smith MPIU_Allreduce - a PETSc replacement for `MPI_Allreduce()` that tries to determine if the call from all the MPI ranks occur from the 264687497f52SBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI ranks follow different code paths 264787497f52SBarry Smith resulting in inconsistent and incorrect calls to `MPI_Allreduce()`. 264877a5e07dSBarry Smith 2649d083f849SBarry Smith Collective 265077a5e07dSBarry Smith 265177a5e07dSBarry Smith Synopsis: 265277a5e07dSBarry Smith #include <petscsys.h> 265377a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 265477a5e07dSBarry Smith 265577a5e07dSBarry Smith Input Parameters: 2656df05ca09SBarry Smith + a - pointer to the input data to be reduced 2657df05ca09SBarry Smith . c - the number of MPI data items in a and b 265887497f52SBarry Smith . d - the MPI datatype, for example `MPI_INT` 265987497f52SBarry Smith . e - the MPI operation, for example `MPI_SUM` 2660df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 266177a5e07dSBarry Smith 266277a5e07dSBarry Smith Output Parameter: 2663df05ca09SBarry Smith . b - the reduced values 266477a5e07dSBarry Smith 2665e28ce29aSPatrick Sanan Notes: 266687497f52SBarry Smith In optimized mode this directly calls `MPI_Allreduce()` 266777a5e07dSBarry Smith 2668df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2669df05ca09SBarry Smith 267087497f52SBarry Smith The error code this returns should be checked with `PetscCall()` even though it looks like an MPI function because it always returns PETSc error codes 2671df05ca09SBarry Smith 267277a5e07dSBarry Smith Level: developer 267377a5e07dSBarry Smith 2674db781477SPatrick Sanan .seealso: `MPI_Allreduce()` 267577a5e07dSBarry Smith M*/ 26769371c9d4SSatish Balay #define MPIU_Allreduce(a, b, c, d, e, fcomm) \ 26779371c9d4SSatish Balay PetscMacroReturnStandard(PetscMPIInt a_b1[6], a_b2[6]; int _mpiu_allreduce_c_int = (int)c; a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0]; a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2]; a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4]; PetscCallMPI(MPI_Allreduce(a_b1, a_b2, 6, MPI_INT, MPI_MAX, fcomm)); PetscCheck(-a_b2[0] == a_b2[1], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (code lines) on different processors"); PetscCheck(-a_b2[2] == a_b2[3], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (functions) on different processors"); PetscCheck(-a_b2[4] == a_b2[5], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called with different counts %d on different processors", _mpiu_allreduce_c_int); PetscCallMPI(MPI_Allreduce((a), (b), (c), d, e, (fcomm)));) 2678b2566f29SBarry Smith #else 26791c2dc1cbSBarry Smith #define MPIU_Allreduce(a, b, c, d, e, fcomm) PetscMacroReturnStandard(PetscCallMPI(MPI_Allreduce((a), (b), (c), d, e, (fcomm)))) 2680b2566f29SBarry Smith #endif 2681b2566f29SBarry Smith 2682b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 26838198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint, PetscMPIInt, MPI_Info, MPI_Comm, void *, MPI_Win *); 26848198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win, PetscMPIInt, MPI_Aint *, PetscMPIInt *, void *); 26852f065d89SBarry Smith #endif 26868198064fSBarry Smith 2687cd88fca5SStefano Zampini /* this is a vile hack */ 2688cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 26899371c9d4SSatish Balay #if !defined(PETSC_NECMPI_VERSION_MAJOR) || !defined(PETSC_NECMPI_VERSION_MINOR) || PETSC_NECMPI_VERSION_MAJOR < 2 || (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2690cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL, 0); 2691cd88fca5SStefano Zampini #endif 2692961fb248SStefano Zampini #endif 2693cd88fca5SStefano Zampini 269412801b39SBarry Smith /* 269560fbe2beSVaclav Hapla List of external packages and queries on it 269660fbe2beSVaclav Hapla */ 269760fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[], PetscBool *); 269860fbe2beSVaclav Hapla 2699a52b435bSMark Adams /* 2700a52b435bSMark Adams OpenMP support 2701a52b435bSMark Adams */ 2702a52b435bSMark Adams #if defined(_OPENMP) 2703a52b435bSMark Adams #define PetscPragmaOMP(...) _Pragma(PetscStringize(omp __VA_ARGS__)) 2704a52b435bSMark Adams #else // no OpenMP so no threads 2705a52b435bSMark Adams #define PetscPragmaOMP(...) 2706a52b435bSMark Adams #endif 2707a52b435bSMark Adams 2708f1f2ae84SBarry Smith /* this cannot go here because it may be in a different shared library */ 2709f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerBegin(void); 2710f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerEnd(void); 2711f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPICommsDestroy(void); 2712d382aafbSBarry Smith #endif 2713