xref: /petsc/include/petscsys.h (revision 014dd563d73e9fc78d056590fa6cf997782bf92d)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
112981ebdbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/
122981ebdbSBarry Smith    does not exist and petscconf.h is in the same directory as the other PETSc include files.
13d382aafbSBarry Smith */
14d382aafbSBarry Smith #include "petscconf.h"
15d382aafbSBarry Smith #include "petscfix.h"
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
29ea0fecefSShri Abhyankar #define _GNU_SOURCE
30ea0fecefSShri Abhyankar #endif
3173fca5a0SBarry Smith #endif
3273fca5a0SBarry Smith 
33d382aafbSBarry Smith /* ========================================================================== */
34d382aafbSBarry Smith /*
352981ebdbSBarry Smith    This facilitates using the C version of PETSc from C++ and the
36e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
37d382aafbSBarry Smith */
38d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
39d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
40d382aafbSBarry Smith #endif
411ec50b02SJed Brown 
421ec50b02SJed Brown #if defined(__cplusplus)
431ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
441ec50b02SJed Brown #else
451ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
461ec50b02SJed Brown #endif
47d382aafbSBarry Smith 
48*014dd563SJed Brown #if defined(_WIN32)             /* For Win32 shared libraries */
49*014dd563SJed Brown #  define PETSC_DLLEXPORT __declspec(dllexport)
50*014dd563SJed Brown #  define PETSC_DLLIMPORT __declspec(dllimport)
51*014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY)
52*014dd563SJed Brown #  define PETSC_DLLEXPORT __attribute__((visibility ("default")))
53*014dd563SJed Brown #  define PETSC_DLLIMPORT __attribute__((visibility ("default")))
54d382aafbSBarry Smith #else
55*014dd563SJed Brown #  define PETSC_DLLEXPORT
56*014dd563SJed Brown #  define PETSC_DLLIMPORT
57*014dd563SJed Brown #endif
58*014dd563SJed Brown 
59*014dd563SJed Brown #if defined(petsc_EXPORTS)      /* CMake defines this when building the shared library */
60*014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT
61*014dd563SJed Brown #else  /* Win32 users need this to import symbols from petsc.dll */
62*014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT
63*014dd563SJed Brown #endif
64*014dd563SJed Brown 
65*014dd563SJed Brown #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
66*014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC
67*014dd563SJed Brown #else
68*014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
69d382aafbSBarry Smith #endif
70d382aafbSBarry Smith /* ========================================================================== */
71d382aafbSBarry Smith /*
72d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
73d382aafbSBarry Smith     Web page
74d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
75d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
76d382aafbSBarry Smith     src/docs/website/index.html.
77d382aafbSBarry Smith */
78d382aafbSBarry Smith #include "petscversion.h"
79301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
80d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
81301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
82d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
83301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
84d382aafbSBarry Smith #else
85301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
86301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
87d382aafbSBarry Smith #endif
88d382aafbSBarry Smith 
89d382aafbSBarry Smith /*MC
90d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
91d382aafbSBarry Smith 
92d382aafbSBarry Smith     Input Parameter:
93d382aafbSBarry Smith .   len - length of the string
94d382aafbSBarry Smith 
95d382aafbSBarry Smith     Output Parameter:
96d382aafbSBarry Smith .   version - version string
97d382aafbSBarry Smith 
98d382aafbSBarry Smith     Level: developer
99d382aafbSBarry Smith 
100d382aafbSBarry Smith     Usage:
101d382aafbSBarry Smith     char version[256];
102d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
103d382aafbSBarry Smith 
104d382aafbSBarry Smith     Fortran Note:
105d382aafbSBarry Smith     This routine is not supported in Fortran.
106d382aafbSBarry Smith 
107d382aafbSBarry Smith .seealso: PetscGetProgramName()
108d382aafbSBarry Smith 
109d382aafbSBarry Smith M*/
110d382aafbSBarry Smith 
111d382aafbSBarry Smith /* ========================================================================== */
112d382aafbSBarry Smith 
113d382aafbSBarry Smith /*
114d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
115d382aafbSBarry Smith 
116d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
117d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
118d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
119d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
120d382aafbSBarry Smith     mpicxx.h directly in their code
121d382aafbSBarry Smith */
122d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
123d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
124d382aafbSBarry Smith #include "mpi.h"
12565013866SBarry Smith 
126d382aafbSBarry Smith /*
1272981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
128d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
129d382aafbSBarry Smith */
130d382aafbSBarry Smith #include <stdio.h>
131d382aafbSBarry Smith 
132d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
133d382aafbSBarry Smith #if !defined(MPIAPI)
134d382aafbSBarry Smith #define MPIAPI
135d382aafbSBarry Smith #endif
136d382aafbSBarry Smith 
137b3506946SBarry Smith 
138d382aafbSBarry Smith /*MC
139d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
140d382aafbSBarry Smith 
141d382aafbSBarry Smith     Level: beginner
142d382aafbSBarry Smith 
143d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
144d382aafbSBarry Smith M*/
145d382aafbSBarry Smith typedef int PetscErrorCode;
146d382aafbSBarry Smith 
147d382aafbSBarry Smith /*MC
148d382aafbSBarry Smith 
149503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
150d382aafbSBarry Smith          (internal integer in the data structure used for error
1512981ebdbSBarry Smith          checking). These are all computed by an offset from the lowest
1520700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
153d382aafbSBarry Smith 
154d382aafbSBarry Smith     Level: advanced
155d382aafbSBarry Smith 
1560700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
157d382aafbSBarry Smith M*/
1580700a824SBarry Smith typedef int PetscClassId;
159d382aafbSBarry Smith 
160d382aafbSBarry Smith 
161d382aafbSBarry Smith /*MC
162d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
163d382aafbSBarry Smith 
164d382aafbSBarry Smith     Level: intermediate
165d382aafbSBarry Smith 
166d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1673b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
168d382aafbSBarry Smith 
1693b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
1702981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
171d382aafbSBarry Smith 
1723b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
1732981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
174d382aafbSBarry Smith 
175d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
176d382aafbSBarry Smith 
177d382aafbSBarry Smith M*/
178d382aafbSBarry Smith typedef int PetscMPIInt;
179d382aafbSBarry Smith 
180d382aafbSBarry Smith /*MC
181d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
182d382aafbSBarry Smith 
183d382aafbSBarry Smith     Level: intermediate
184d382aafbSBarry Smith 
185d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
186d382aafbSBarry Smith M*/
187d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
188d382aafbSBarry Smith 
189d382aafbSBarry Smith /*MC
190d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1913b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
192d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
193d382aafbSBarry Smith 
194d382aafbSBarry Smith    Level: intermediate
195d382aafbSBarry Smith 
196d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
197d382aafbSBarry Smith M*/
198f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
199f505b413SSatish Balay typedef long long Petsc64bitInt;
200f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
201236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
202236ed0a3SSatish Balay #else
203f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
204236ed0a3SSatish Balay #endif
205d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
206236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
207d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
208d382aafbSBarry Smith #else
209d382aafbSBarry Smith typedef int PetscInt;
210d382aafbSBarry Smith #define MPIU_INT MPI_INT
211d382aafbSBarry Smith #endif
212236ed0a3SSatish Balay 
213d382aafbSBarry Smith 
214702bc34aSSatish Balay /*MC
215702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
216702bc34aSSatish Balay 
217702bc34aSSatish Balay     Level: intermediate
218702bc34aSSatish Balay 
219702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
220702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
221702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
222702bc34aSSatish Balay 
223702bc34aSSatish Balay     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
2242981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
225702bc34aSSatish Balay 
226702bc34aSSatish Balay     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
2272981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
228702bc34aSSatish Balay 
2292981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
230702bc34aSSatish Balay      if you run ./configure with the option
231702bc34aSSatish Balay      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
2322981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
2332981ebdbSBarry Smith 
2342981ebdbSBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices
2352981ebdbSBarry Smith 
2362981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
237702bc34aSSatish Balay 
238702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
239702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
240702bc34aSSatish Balay 
241702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt
242702bc34aSSatish Balay 
243702bc34aSSatish Balay M*/
244702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
245702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt;
246702bc34aSSatish Balay #else
247702bc34aSSatish Balay typedef int PetscBLASInt;
248702bc34aSSatish Balay #endif
249702bc34aSSatish Balay 
25058b60935SBarry Smith /*EC
25158b60935SBarry Smith 
2522981ebdbSBarry Smith     PetscPrecision - indicates what precision the object is using. This is currently not used.
25358b60935SBarry Smith 
25458b60935SBarry Smith     Level: advanced
25558b60935SBarry Smith 
25658b60935SBarry Smith .seealso: PetscObjectSetPrecision()
25758b60935SBarry Smith E*/
25858b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
259*014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[];
26058b60935SBarry Smith 
261503cfb0cSBarry Smith /*
262503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
263503cfb0cSBarry Smith */
264d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
265d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
266d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
267d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
268d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
269d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
270d382aafbSBarry Smith #else
271d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
272d382aafbSBarry Smith #endif
273d382aafbSBarry Smith 
274d382aafbSBarry Smith 
275d382aafbSBarry Smith /*
276d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
277d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
278d382aafbSBarry Smith */
279*014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT;
280d382aafbSBarry Smith 
281d382aafbSBarry Smith /*
282d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
283d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
284d382aafbSBarry Smith */
285*014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR;
286d382aafbSBarry Smith 
287d382aafbSBarry Smith /*MC
288d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
289d382aafbSBarry Smith 
290d382aafbSBarry Smith     Synopsis:
291ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
292d382aafbSBarry Smith 
293eca87e8dSBarry Smith     Not Collective
294eca87e8dSBarry Smith 
295d382aafbSBarry Smith     Input Parameters:
296d382aafbSBarry Smith .   cond - condition or expression
297d382aafbSBarry Smith 
298d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
299d382aafbSBarry Smith     branch is unlikely.
300d382aafbSBarry Smith 
301d382aafbSBarry Smith     Level: advanced
302d382aafbSBarry Smith 
303d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
304d382aafbSBarry Smith M*/
305d382aafbSBarry Smith 
306d382aafbSBarry Smith /*MC
307d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
308d382aafbSBarry Smith 
309d382aafbSBarry Smith     Synopsis:
310ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
311d382aafbSBarry Smith 
312eca87e8dSBarry Smith     Not Collective
313eca87e8dSBarry Smith 
314d382aafbSBarry Smith     Input Parameters:
315d382aafbSBarry Smith .   cond - condition or expression
316d382aafbSBarry Smith 
317d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
318d382aafbSBarry Smith     branch is likely.
319d382aafbSBarry Smith 
320d382aafbSBarry Smith     Level: advanced
321d382aafbSBarry Smith 
322d382aafbSBarry Smith .seealso: PetscUnlikely()
323d382aafbSBarry Smith M*/
324d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
325d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
326d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
327d382aafbSBarry Smith #else
328cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
329cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
330d382aafbSBarry Smith #endif
331d382aafbSBarry Smith 
332d382aafbSBarry Smith /*
333d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
334d382aafbSBarry Smith */
335d382aafbSBarry Smith #include "petscmath.h"
336d382aafbSBarry Smith 
337d382aafbSBarry Smith /*
338d382aafbSBarry Smith     Declare extern C stuff after including external header files
339d382aafbSBarry Smith */
340d382aafbSBarry Smith 
341d382aafbSBarry Smith 
342d382aafbSBarry Smith /*
343d382aafbSBarry Smith        Basic PETSc constants
344d382aafbSBarry Smith */
345d382aafbSBarry Smith 
346d382aafbSBarry Smith /*E
347ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
348d382aafbSBarry Smith 
349d382aafbSBarry Smith    Level: beginner
350d382aafbSBarry Smith 
351ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
35234e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
35334e82e7dSBarry Smith 
354d382aafbSBarry Smith E*/
355ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
356*014dd563SJed Brown PETSC_EXTERN const char *PetscBools[];
35770b3c8c7SBarry Smith 
35870b3c8c7SBarry Smith /*E
35970b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
36070b3c8c7SBarry Smith 
36170b3c8c7SBarry Smith    Level: beginner
36270b3c8c7SBarry Smith 
36370b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
36470b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
36570b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
36670b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
36770b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
36870b3c8c7SBarry Smith 
36970b3c8c7SBarry Smith E*/
37070b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
371*014dd563SJed Brown PETSC_EXTERN const char *PetscCopyModes[];
372d382aafbSBarry Smith 
373d382aafbSBarry Smith /*MC
374ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
375d382aafbSBarry Smith 
376d382aafbSBarry Smith     Level: beginner
377d382aafbSBarry Smith 
378d382aafbSBarry Smith     Note: Zero integer
379d382aafbSBarry Smith 
380ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
381d382aafbSBarry Smith M*/
382d382aafbSBarry Smith 
383d382aafbSBarry Smith /*MC
384ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
385d382aafbSBarry Smith 
386d382aafbSBarry Smith     Level: beginner
387d382aafbSBarry Smith 
388d382aafbSBarry Smith     Note: Nonzero integer
389d382aafbSBarry Smith 
390ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
391d382aafbSBarry Smith M*/
392d382aafbSBarry Smith 
393d382aafbSBarry Smith /*MC
394d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
395d382aafbSBarry Smith 
396d382aafbSBarry Smith    Level: beginner
397d382aafbSBarry Smith 
398d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
399d382aafbSBarry Smith           some default
400d382aafbSBarry Smith 
401d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
402503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
403d382aafbSBarry Smith 
40434e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
40534e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
40634e82e7dSBarry Smith 
407d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
408d382aafbSBarry Smith 
409d382aafbSBarry Smith M*/
410d382aafbSBarry Smith #define PETSC_NULL           0
411d382aafbSBarry Smith 
412d382aafbSBarry Smith /*MC
413d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
414d382aafbSBarry Smith 
415d382aafbSBarry Smith    Level: beginner
416d382aafbSBarry Smith 
417d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
418d382aafbSBarry Smith           some default
419d382aafbSBarry Smith 
420d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
421d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
422d382aafbSBarry Smith 
423d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
424d382aafbSBarry Smith 
425d382aafbSBarry Smith M*/
426d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
427d382aafbSBarry Smith 
428d382aafbSBarry Smith /*MC
429557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
430557d4da8SBarry Smith        where you wish PETSc to use the default.
431557d4da8SBarry Smith 
432557d4da8SBarry Smith    Level: beginner
433557d4da8SBarry Smith 
434557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
435557d4da8SBarry Smith 
436557d4da8SBarry Smith M*/
437557d4da8SBarry Smith #define PETSC_DECIDE  -1
438557d4da8SBarry Smith 
439557d4da8SBarry Smith /*MC
440d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
441d382aafbSBarry Smith        where you wish PETSc to compute the required value.
442d382aafbSBarry Smith 
443d382aafbSBarry Smith    Level: beginner
444d382aafbSBarry Smith 
445557d4da8SBarry Smith 
446557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
447557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
448557d4da8SBarry Smith 
449d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
450d382aafbSBarry Smith 
451d382aafbSBarry Smith M*/
452d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
453d382aafbSBarry Smith 
454d382aafbSBarry Smith /*MC
455557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
456557d4da8SBarry Smith        where you wish PETSc to use the default.
457557d4da8SBarry Smith 
458557d4da8SBarry Smith    Level: beginner
459557d4da8SBarry Smith 
460557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
461557d4da8SBarry Smith 
462557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
463557d4da8SBarry Smith 
464557d4da8SBarry Smith M*/
465557d4da8SBarry Smith #define PETSC_DEFAULT  -2
466557d4da8SBarry Smith 
467557d4da8SBarry Smith /*MC
468d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
469d382aafbSBarry Smith            all the processs that PETSc knows about.
470d382aafbSBarry Smith 
471d382aafbSBarry Smith    Level: beginner
472d382aafbSBarry Smith 
473d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
474d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
475d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
476d382aafbSBarry Smith           PetscInitialize()
477d382aafbSBarry Smith 
478d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
479d382aafbSBarry Smith 
480d382aafbSBarry Smith M*/
481*014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
482d382aafbSBarry Smith 
483d382aafbSBarry Smith /*MC
484503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
485d382aafbSBarry Smith 
486d382aafbSBarry Smith    Level: beginner
487d382aafbSBarry Smith 
488d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
489d382aafbSBarry Smith 
490d382aafbSBarry Smith M*/
491d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
492d382aafbSBarry Smith 
493*014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled;
494*014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled;
495*014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize;
496d382aafbSBarry Smith 
497*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
498*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
499*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
500d382aafbSBarry Smith 
501d382aafbSBarry Smith /*MC
502d382aafbSBarry Smith    PetscMalloc - Allocates memory
503d382aafbSBarry Smith 
504eca87e8dSBarry Smith    Synopsis:
505eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
506eca87e8dSBarry Smith 
507eca87e8dSBarry Smith    Not Collective
508eca87e8dSBarry Smith 
509d382aafbSBarry Smith    Input Parameter:
510d382aafbSBarry Smith .  m - number of bytes to allocate
511d382aafbSBarry Smith 
512d382aafbSBarry Smith    Output Parameter:
513d382aafbSBarry Smith .  result - memory allocated
514d382aafbSBarry Smith 
515d382aafbSBarry Smith    Level: beginner
516d382aafbSBarry Smith 
517d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
518d382aafbSBarry Smith 
519d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
520d382aafbSBarry Smith           properly handle not freeing the null pointer.
521d382aafbSBarry Smith 
522d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
523d382aafbSBarry Smith 
524d382aafbSBarry Smith   Concepts: memory allocation
525d382aafbSBarry Smith 
526d382aafbSBarry Smith M*/
5272714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
528d382aafbSBarry Smith 
529d382aafbSBarry Smith /*MC
530503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
531d382aafbSBarry Smith 
532d382aafbSBarry Smith    Synopsis:
533d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
534d382aafbSBarry Smith 
535eca87e8dSBarry Smith    Not Collective
536eca87e8dSBarry Smith 
537eca87e8dSBarry Smith    Input Parameters:
538eca87e8dSBarry Smith .  addr - address to align (any pointer type)
539eca87e8dSBarry Smith 
540d382aafbSBarry Smith    Level: developer
541d382aafbSBarry Smith 
542d382aafbSBarry Smith .seealso: PetscMallocAlign()
543d382aafbSBarry Smith 
544d382aafbSBarry Smith   Concepts: memory allocation
545d382aafbSBarry Smith M*/
546d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
547d382aafbSBarry Smith 
548d382aafbSBarry Smith /*MC
549503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
550d382aafbSBarry Smith 
551eca87e8dSBarry Smith    Synopsis:
552eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
553eca87e8dSBarry Smith 
554eca87e8dSBarry Smith    Not Collective
555eca87e8dSBarry Smith 
556d382aafbSBarry Smith    Input Parameter:
557d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
558d382aafbSBarry Smith .  t1 - type of first memory elements
559d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
560d382aafbSBarry Smith -  t2 - type of second memory elements
561d382aafbSBarry Smith 
562d382aafbSBarry Smith    Output Parameter:
563d382aafbSBarry Smith +  r1 - memory allocated in first chunk
564d382aafbSBarry Smith -  r2 - memory allocated in second chunk
565d382aafbSBarry Smith 
566d382aafbSBarry Smith    Level: developer
567d382aafbSBarry Smith 
568d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
569d382aafbSBarry Smith 
570d382aafbSBarry Smith   Concepts: memory allocation
571d382aafbSBarry Smith 
572d382aafbSBarry Smith M*/
573d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
574d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
575d382aafbSBarry Smith #else
5762981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
577d382aafbSBarry Smith #endif
578d382aafbSBarry Smith 
579d382aafbSBarry Smith /*MC
580503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
581d382aafbSBarry Smith 
582eca87e8dSBarry Smith    Synopsis:
583eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
584eca87e8dSBarry Smith 
585eca87e8dSBarry Smith    Not Collective
586eca87e8dSBarry Smith 
587d382aafbSBarry Smith    Input Parameter:
588d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
589d382aafbSBarry Smith .  t1 - type of first memory elements
590d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
591d382aafbSBarry Smith .  t2 - type of second memory elements
592d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
593d382aafbSBarry Smith -  t3 - type of third memory elements
594d382aafbSBarry Smith 
595d382aafbSBarry Smith    Output Parameter:
596d382aafbSBarry Smith +  r1 - memory allocated in first chunk
597d382aafbSBarry Smith .  r2 - memory allocated in second chunk
598d382aafbSBarry Smith -  r3 - memory allocated in third chunk
599d382aafbSBarry Smith 
600d382aafbSBarry Smith    Level: developer
601d382aafbSBarry Smith 
602d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
603d382aafbSBarry Smith 
604d382aafbSBarry Smith   Concepts: memory allocation
605d382aafbSBarry Smith 
606d382aafbSBarry Smith M*/
607d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
608d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
609d382aafbSBarry Smith #else
6103b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
611d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
612d382aafbSBarry Smith #endif
613d382aafbSBarry Smith 
614d382aafbSBarry Smith /*MC
615503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
616d382aafbSBarry Smith 
617eca87e8dSBarry Smith    Synopsis:
618eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
619eca87e8dSBarry Smith 
620eca87e8dSBarry Smith    Not Collective
621eca87e8dSBarry Smith 
622d382aafbSBarry Smith    Input Parameter:
623d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
624d382aafbSBarry Smith .  t1 - type of first memory elements
625d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
626d382aafbSBarry Smith .  t2 - type of second memory elements
627d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
628d382aafbSBarry Smith .  t3 - type of third memory elements
629d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
630d382aafbSBarry Smith -  t4 - type of fourth memory elements
631d382aafbSBarry Smith 
632d382aafbSBarry Smith    Output Parameter:
633d382aafbSBarry Smith +  r1 - memory allocated in first chunk
634d382aafbSBarry Smith .  r2 - memory allocated in second chunk
635d382aafbSBarry Smith .  r3 - memory allocated in third chunk
636d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
637d382aafbSBarry Smith 
638d382aafbSBarry Smith    Level: developer
639d382aafbSBarry Smith 
640d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
641d382aafbSBarry Smith 
642d382aafbSBarry Smith   Concepts: memory allocation
643d382aafbSBarry Smith 
644d382aafbSBarry Smith M*/
645d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
646d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
647d382aafbSBarry Smith #else
648d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6493b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
650d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
651d382aafbSBarry Smith #endif
652d382aafbSBarry Smith 
653d382aafbSBarry Smith /*MC
654503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
655d382aafbSBarry Smith 
656eca87e8dSBarry Smith    Synopsis:
657eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
658eca87e8dSBarry Smith 
659eca87e8dSBarry Smith    Not Collective
660eca87e8dSBarry Smith 
661d382aafbSBarry Smith    Input Parameter:
662d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
663d382aafbSBarry Smith .  t1 - type of first memory elements
664d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
665d382aafbSBarry Smith .  t2 - type of second memory elements
666d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
667d382aafbSBarry Smith .  t3 - type of third memory elements
668d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
669d382aafbSBarry Smith .  t4 - type of fourth memory elements
670d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
671d382aafbSBarry Smith -  t5 - type of fifth memory elements
672d382aafbSBarry Smith 
673d382aafbSBarry Smith    Output Parameter:
674d382aafbSBarry Smith +  r1 - memory allocated in first chunk
675d382aafbSBarry Smith .  r2 - memory allocated in second chunk
676d382aafbSBarry Smith .  r3 - memory allocated in third chunk
677d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
678d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
679d382aafbSBarry Smith 
680d382aafbSBarry Smith    Level: developer
681d382aafbSBarry Smith 
682d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
683d382aafbSBarry Smith 
684d382aafbSBarry Smith   Concepts: memory allocation
685d382aafbSBarry Smith 
686d382aafbSBarry Smith M*/
687d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
688d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
689d382aafbSBarry Smith #else
690d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
6913b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
692d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
693d382aafbSBarry Smith #endif
694d382aafbSBarry Smith 
695d382aafbSBarry Smith 
696d382aafbSBarry Smith /*MC
697503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
698d382aafbSBarry Smith 
699eca87e8dSBarry Smith    Synopsis:
700eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
701eca87e8dSBarry Smith 
702eca87e8dSBarry Smith    Not Collective
703eca87e8dSBarry Smith 
704d382aafbSBarry Smith    Input Parameter:
705d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
706d382aafbSBarry Smith .  t1 - type of first memory elements
707d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
708d382aafbSBarry Smith .  t2 - type of second memory elements
709d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
710d382aafbSBarry Smith .  t3 - type of third memory elements
711d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
712d382aafbSBarry Smith .  t4 - type of fourth memory elements
713d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
714d382aafbSBarry Smith .  t5 - type of fifth memory elements
715d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
716d382aafbSBarry Smith -  t6 - type of sixth memory elements
717d382aafbSBarry Smith 
718d382aafbSBarry Smith    Output Parameter:
719d382aafbSBarry Smith +  r1 - memory allocated in first chunk
720d382aafbSBarry Smith .  r2 - memory allocated in second chunk
721d382aafbSBarry Smith .  r3 - memory allocated in third chunk
722d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
723d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
724d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
725d382aafbSBarry Smith 
726d382aafbSBarry Smith    Level: developer
727d382aafbSBarry Smith 
728d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
729d382aafbSBarry Smith 
730d382aafbSBarry Smith   Concepts: memory allocation
731d382aafbSBarry Smith 
732d382aafbSBarry Smith M*/
733d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
734d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
735d382aafbSBarry Smith #else
736d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7373b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
738d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
739d382aafbSBarry Smith #endif
740d382aafbSBarry Smith 
741d382aafbSBarry Smith /*MC
742503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
743d382aafbSBarry Smith 
744eca87e8dSBarry Smith    Synopsis:
745eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
746eca87e8dSBarry Smith 
747eca87e8dSBarry Smith    Not Collective
748eca87e8dSBarry Smith 
749d382aafbSBarry Smith    Input Parameter:
750d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
751d382aafbSBarry Smith .  t1 - type of first memory elements
752d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
753d382aafbSBarry Smith .  t2 - type of second memory elements
754d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
755d382aafbSBarry Smith .  t3 - type of third memory elements
756d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
757d382aafbSBarry Smith .  t4 - type of fourth memory elements
758d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
759d382aafbSBarry Smith .  t5 - type of fifth memory elements
760d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
761d382aafbSBarry Smith .  t6 - type of sixth memory elements
762d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
763d382aafbSBarry Smith -  t7 - type of sixth memory elements
764d382aafbSBarry Smith 
765d382aafbSBarry Smith    Output Parameter:
766d382aafbSBarry Smith +  r1 - memory allocated in first chunk
767d382aafbSBarry Smith .  r2 - memory allocated in second chunk
768d382aafbSBarry Smith .  r3 - memory allocated in third chunk
769d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
770d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
771d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
772eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
773d382aafbSBarry Smith 
774d382aafbSBarry Smith    Level: developer
775d382aafbSBarry Smith 
776d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
777d382aafbSBarry Smith 
778d382aafbSBarry Smith   Concepts: memory allocation
779d382aafbSBarry Smith 
780d382aafbSBarry Smith M*/
781d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
782d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
783d382aafbSBarry Smith #else
784d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
7853b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
786d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
787d382aafbSBarry Smith #endif
788d382aafbSBarry Smith 
789d382aafbSBarry Smith /*MC
790503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
791d382aafbSBarry Smith 
792eca87e8dSBarry Smith    Synopsis:
793eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
794eca87e8dSBarry Smith 
795eca87e8dSBarry Smith    Not Collective
796eca87e8dSBarry Smith 
797d382aafbSBarry Smith    Input Parameter:
798d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
799d382aafbSBarry Smith 
800d382aafbSBarry Smith    Output Parameter:
801d382aafbSBarry Smith .  result - memory allocated
802d382aafbSBarry Smith 
803d382aafbSBarry Smith    Level: beginner
804d382aafbSBarry Smith 
805ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
806d382aafbSBarry Smith 
807d382aafbSBarry Smith   Concepts: memory allocation
808d382aafbSBarry Smith 
809d382aafbSBarry Smith M*/
810d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
811ad0619ddSBarry Smith 
812ad0619ddSBarry Smith /*MC
813ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
814ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
815ad0619ddSBarry Smith 
816ad0619ddSBarry Smith    Synopsis:
817ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
818ad0619ddSBarry Smith 
819ad0619ddSBarry Smith    Not Collective
820ad0619ddSBarry Smith 
821ad0619ddSBarry Smith    Input Parameter:
822ad0619ddSBarry Smith +  obj - object memory is logged to
823ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
824ad0619ddSBarry Smith 
825ad0619ddSBarry Smith    Output Parameter:
826ad0619ddSBarry Smith .  result - memory allocated
827ad0619ddSBarry Smith 
828ad0619ddSBarry Smith    Level: developer
829ad0619ddSBarry Smith 
830ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
831ad0619ddSBarry Smith 
832ad0619ddSBarry Smith   Concepts: memory allocation
833ad0619ddSBarry Smith 
834ad0619ddSBarry Smith M*/
835d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
836d382aafbSBarry Smith 
837d382aafbSBarry Smith /*MC
838d382aafbSBarry Smith    PetscFree - Frees memory
839d382aafbSBarry Smith 
840eca87e8dSBarry Smith    Synopsis:
841eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
842eca87e8dSBarry Smith 
843eca87e8dSBarry Smith    Not Collective
844eca87e8dSBarry Smith 
845d382aafbSBarry Smith    Input Parameter:
846d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
847d382aafbSBarry Smith 
848d382aafbSBarry Smith    Level: beginner
849d382aafbSBarry Smith 
850d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
851d382aafbSBarry Smith 
852d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
853d382aafbSBarry Smith 
854d382aafbSBarry Smith   Concepts: memory allocation
855d382aafbSBarry Smith 
856d382aafbSBarry Smith M*/
85712537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
858d382aafbSBarry Smith 
859d382aafbSBarry Smith /*MC
860d382aafbSBarry Smith    PetscFreeVoid - Frees memory
861d382aafbSBarry Smith 
862d382aafbSBarry Smith    Synopsis:
863d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
864d382aafbSBarry Smith 
865eca87e8dSBarry Smith    Not Collective
866eca87e8dSBarry Smith 
867eca87e8dSBarry Smith    Input Parameter:
868eca87e8dSBarry Smith .   memory - memory to free
869eca87e8dSBarry Smith 
870d382aafbSBarry Smith    Level: beginner
871d382aafbSBarry Smith 
872d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
873d382aafbSBarry Smith 
874d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
875d382aafbSBarry Smith 
876d382aafbSBarry Smith   Concepts: memory allocation
877d382aafbSBarry Smith 
878d382aafbSBarry Smith M*/
8792714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
880d382aafbSBarry Smith 
881d382aafbSBarry Smith 
882d382aafbSBarry Smith /*MC
883d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
884d382aafbSBarry Smith 
885eca87e8dSBarry Smith    Synopsis:
886eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
887eca87e8dSBarry Smith 
888eca87e8dSBarry Smith    Not Collective
889eca87e8dSBarry Smith 
890d382aafbSBarry Smith    Input Parameter:
891d382aafbSBarry Smith +   memory1 - memory to free
892d382aafbSBarry Smith -   memory2 - 2nd memory to free
893d382aafbSBarry Smith 
894d382aafbSBarry Smith    Level: developer
895d382aafbSBarry Smith 
896d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
897d382aafbSBarry Smith 
898d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
899d382aafbSBarry Smith 
900d382aafbSBarry Smith   Concepts: memory allocation
901d382aafbSBarry Smith 
902d382aafbSBarry Smith M*/
903d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
904d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
905d382aafbSBarry Smith #else
90681dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
907d382aafbSBarry Smith #endif
908d382aafbSBarry Smith 
909d382aafbSBarry Smith /*MC
910d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
911d382aafbSBarry Smith 
912eca87e8dSBarry Smith    Synopsis:
913eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
914eca87e8dSBarry Smith 
915eca87e8dSBarry Smith    Not Collective
916eca87e8dSBarry Smith 
917d382aafbSBarry Smith    Input Parameter:
918d382aafbSBarry Smith +   memory1 - memory to free
919d382aafbSBarry Smith .   memory2 - 2nd memory to free
920d382aafbSBarry Smith -   memory3 - 3rd memory to free
921d382aafbSBarry Smith 
922d382aafbSBarry Smith    Level: developer
923d382aafbSBarry Smith 
924d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
925d382aafbSBarry Smith 
926d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
927d382aafbSBarry Smith 
928d382aafbSBarry Smith   Concepts: memory allocation
929d382aafbSBarry Smith 
930d382aafbSBarry Smith M*/
931d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
932d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
933d382aafbSBarry Smith #else
93481dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
935d382aafbSBarry Smith #endif
936d382aafbSBarry Smith 
937d382aafbSBarry Smith /*MC
938d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
939d382aafbSBarry Smith 
940eca87e8dSBarry Smith    Synopsis:
941eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
942eca87e8dSBarry Smith 
943eca87e8dSBarry Smith    Not Collective
944eca87e8dSBarry Smith 
945d382aafbSBarry Smith    Input Parameter:
946d382aafbSBarry Smith +   m1 - memory to free
947d382aafbSBarry Smith .   m2 - 2nd memory to free
948d382aafbSBarry Smith .   m3 - 3rd memory to free
949d382aafbSBarry Smith -   m4 - 4th memory to free
950d382aafbSBarry Smith 
951d382aafbSBarry Smith    Level: developer
952d382aafbSBarry Smith 
953d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
954d382aafbSBarry Smith 
955d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
956d382aafbSBarry Smith 
957d382aafbSBarry Smith   Concepts: memory allocation
958d382aafbSBarry Smith 
959d382aafbSBarry Smith M*/
960d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
961d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
962d382aafbSBarry Smith #else
96381dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
964d382aafbSBarry Smith #endif
965d382aafbSBarry Smith 
966d382aafbSBarry Smith /*MC
967d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
968d382aafbSBarry Smith 
969eca87e8dSBarry Smith    Synopsis:
970eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
971eca87e8dSBarry Smith 
972eca87e8dSBarry Smith    Not Collective
973eca87e8dSBarry Smith 
974d382aafbSBarry Smith    Input Parameter:
975d382aafbSBarry Smith +   m1 - memory to free
976d382aafbSBarry Smith .   m2 - 2nd memory to free
977d382aafbSBarry Smith .   m3 - 3rd memory to free
978d382aafbSBarry Smith .   m4 - 4th memory to free
979d382aafbSBarry Smith -   m5 - 5th memory to free
980d382aafbSBarry Smith 
981d382aafbSBarry Smith    Level: developer
982d382aafbSBarry Smith 
983d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
984d382aafbSBarry Smith 
985d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
986d382aafbSBarry Smith 
987d382aafbSBarry Smith   Concepts: memory allocation
988d382aafbSBarry Smith 
989d382aafbSBarry Smith M*/
990d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
991d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
992d382aafbSBarry Smith #else
99381dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
994d382aafbSBarry Smith #endif
995d382aafbSBarry Smith 
996d382aafbSBarry Smith 
997d382aafbSBarry Smith /*MC
998d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
999d382aafbSBarry Smith 
1000eca87e8dSBarry Smith    Synopsis:
1001eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1002eca87e8dSBarry Smith 
1003eca87e8dSBarry Smith    Not Collective
1004eca87e8dSBarry Smith 
1005d382aafbSBarry Smith    Input Parameter:
1006d382aafbSBarry Smith +   m1 - memory to free
1007d382aafbSBarry Smith .   m2 - 2nd memory to free
1008d382aafbSBarry Smith .   m3 - 3rd memory to free
1009d382aafbSBarry Smith .   m4 - 4th memory to free
1010d382aafbSBarry Smith .   m5 - 5th memory to free
1011d382aafbSBarry Smith -   m6 - 6th memory to free
1012d382aafbSBarry Smith 
1013d382aafbSBarry Smith 
1014d382aafbSBarry Smith    Level: developer
1015d382aafbSBarry Smith 
1016d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1017d382aafbSBarry Smith 
1018d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1019d382aafbSBarry Smith 
1020d382aafbSBarry Smith   Concepts: memory allocation
1021d382aafbSBarry Smith 
1022d382aafbSBarry Smith M*/
1023d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1024d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1025d382aafbSBarry Smith #else
102681dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1027d382aafbSBarry Smith #endif
1028d382aafbSBarry Smith 
1029d382aafbSBarry Smith /*MC
1030d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1031d382aafbSBarry Smith 
1032eca87e8dSBarry Smith    Synopsis:
1033eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1034eca87e8dSBarry Smith 
1035eca87e8dSBarry Smith    Not Collective
1036eca87e8dSBarry Smith 
1037d382aafbSBarry Smith    Input Parameter:
1038d382aafbSBarry Smith +   m1 - memory to free
1039d382aafbSBarry Smith .   m2 - 2nd memory to free
1040d382aafbSBarry Smith .   m3 - 3rd memory to free
1041d382aafbSBarry Smith .   m4 - 4th memory to free
1042d382aafbSBarry Smith .   m5 - 5th memory to free
1043d382aafbSBarry Smith .   m6 - 6th memory to free
1044d382aafbSBarry Smith -   m7 - 7th memory to free
1045d382aafbSBarry Smith 
1046d382aafbSBarry Smith 
1047d382aafbSBarry Smith    Level: developer
1048d382aafbSBarry Smith 
1049d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1050d382aafbSBarry Smith 
1051d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1052d382aafbSBarry Smith           PetscMalloc7()
1053d382aafbSBarry Smith 
1054d382aafbSBarry Smith   Concepts: memory allocation
1055d382aafbSBarry Smith 
1056d382aafbSBarry Smith M*/
1057d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1058d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1059d382aafbSBarry Smith #else
106081dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1061d382aafbSBarry Smith #endif
1062d382aafbSBarry Smith 
1063*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
1064*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
1065*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
1066*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1067d382aafbSBarry Smith 
1068d382aafbSBarry Smith /*
1069a5057860SBarry Smith     PetscLogDouble variables are used to contain double precision numbers
1070a5057860SBarry Smith   that are not used in the numerical computations, but rather in logging,
1071a5057860SBarry Smith   timing etc.
1072a5057860SBarry Smith */
1073a5057860SBarry Smith typedef double PetscLogDouble;
1074a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1075a5057860SBarry Smith 
1076a5057860SBarry Smith /*
107766d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1078d382aafbSBarry Smith */
1079*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
1080*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *);
1081*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1082*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1083*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool);
1084*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]);
1085*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void);
1086*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1087d382aafbSBarry Smith 
1088d382aafbSBarry Smith /*E
1089d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1090d382aafbSBarry Smith 
1091d382aafbSBarry Smith    Level: beginner
1092d382aafbSBarry Smith 
1093d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1094d382aafbSBarry Smith 
1095d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1096d382aafbSBarry Smith           PetscDataTypeGetSize()
1097d382aafbSBarry Smith 
1098d382aafbSBarry Smith E*/
1099d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
110059a34000SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10} PetscDataType;
1101*014dd563SJed Brown PETSC_EXTERN const char *PetscDataTypes[];
1102d382aafbSBarry Smith 
1103d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1104d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1105d382aafbSBarry Smith #else
1106ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1107d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
110859a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
110959a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1110d382aafbSBarry Smith #else
1111d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1112d382aafbSBarry Smith #endif
1113d382aafbSBarry Smith #endif
1114ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1115d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
111659a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
111759a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1118d382aafbSBarry Smith #else
1119d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1120d382aafbSBarry Smith #endif
1121d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1122d382aafbSBarry Smith 
1123*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1124*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1125*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
1126d382aafbSBarry Smith 
1127d382aafbSBarry Smith /*
1128d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1129d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1130d382aafbSBarry Smith    functionality and/or error checking.
1131d382aafbSBarry Smith */
1132*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
1133*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t);
1134*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
1135*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1136*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],int*,char ***);
1137*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1138*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool  *);
1139*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool  *);
1140*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1141*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1142*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1143*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1144*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t);
1145*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1146*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1147*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
1148*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1149*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1150*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1151*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
1152*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1153*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
1154*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1155d382aafbSBarry Smith 
1156d382aafbSBarry Smith /*S
1157d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1158d382aafbSBarry Smith 
1159d382aafbSBarry Smith   Level: intermediate
1160d382aafbSBarry Smith 
1161d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1162d382aafbSBarry Smith S*/
1163d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1164d382aafbSBarry Smith 
1165*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1166*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1167*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1168d382aafbSBarry Smith 
1169d382aafbSBarry Smith /*
1170d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1171d382aafbSBarry Smith */
1172*014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op;
11732414b3c7SJed Brown #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
1174*014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM;
11752414b3c7SJed Brown #else
11762414b3c7SJed Brown #define MPIU_SUM MPI_SUM
11772414b3c7SJed Brown #endif
11782414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128)
1179*014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX;
1180*014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN;
1181d9822059SBarry Smith #else
1182d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1183d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1184d9822059SBarry Smith #endif
1185*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1186d382aafbSBarry Smith 
1187*014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1188*014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1189eb3f98d2SBarry Smith 
1190d382aafbSBarry Smith /*S
1191d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1192d382aafbSBarry Smith 
1193d382aafbSBarry Smith    Level: beginner
1194d382aafbSBarry Smith 
11952981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1196d382aafbSBarry Smith 
11971890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1198d382aafbSBarry Smith S*/
1199d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1200d382aafbSBarry Smith 
1201d382aafbSBarry Smith /*S
1202d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1203d382aafbSBarry Smith       by string name
1204d382aafbSBarry Smith 
1205d382aafbSBarry Smith    Level: advanced
1206d382aafbSBarry Smith 
12072981ebdbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy(), PetscOpFlist
1208d382aafbSBarry Smith S*/
1209d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1210d382aafbSBarry Smith 
1211e4d1774bSDmitry Karpeev /*S
1212e4d1774bSDmitry Karpeev      PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries,
1213e4d1774bSDmitry Karpeev                     accessed by string op name together with string argument types.
1214e4d1774bSDmitry Karpeev 
1215e4d1774bSDmitry Karpeev    Level: advanced
1216e4d1774bSDmitry Karpeev 
12172981ebdbSBarry Smith .seealso:  PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy()
1218e4d1774bSDmitry Karpeev S*/
1219e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList;
1220e4d1774bSDmitry Karpeev 
1221d382aafbSBarry Smith /*E
1222d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1223d382aafbSBarry Smith 
1224d382aafbSBarry Smith   Level: beginner
1225d382aafbSBarry Smith 
1226d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1227d382aafbSBarry Smith 
1228d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1229d382aafbSBarry Smith 
1230d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1231d382aafbSBarry Smith 
1232d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1233d382aafbSBarry Smith 
1234d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1235d382aafbSBarry Smith 
1236d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1237d382aafbSBarry Smith E*/
1238d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1239d382aafbSBarry Smith 
1240d382aafbSBarry Smith #include "petscviewer.h"
1241d382aafbSBarry Smith #include "petscoptions.h"
1242d382aafbSBarry Smith 
12430700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
1244*014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1245*014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1246*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1247d382aafbSBarry Smith 
1248d382aafbSBarry Smith /*
1249d382aafbSBarry Smith    Routines that get memory usage information from the OS
1250d382aafbSBarry Smith */
1251*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1252*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1253*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1254*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]);
1255d382aafbSBarry Smith 
1256*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []);
1257*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*);
1258*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*);
1259*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1260d382aafbSBarry Smith 
1261d382aafbSBarry Smith /*
1262d382aafbSBarry Smith    Initialization of PETSc
1263d382aafbSBarry Smith */
1264*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1265*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1266*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1267*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1268*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1269*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1270*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1271*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1272*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1273*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1274d382aafbSBarry Smith 
1275*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void);
1276*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]);
1277d382aafbSBarry Smith 
1278*014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD;
1279*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
1280*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt);
1281*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void);
1282*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
1283*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
1284*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*);
1285*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**);
1286d382aafbSBarry Smith 
1287*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1288*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1289*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1290*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1291d382aafbSBarry Smith 
1292d382aafbSBarry Smith /*
1293d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
12942981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1295d382aafbSBarry Smith */
1296d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1297d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1298d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1299d382aafbSBarry Smith 
1300d382aafbSBarry Smith /*
1301d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1302d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1303503cfb0cSBarry Smith 
1304503cfb0cSBarry Smith    Level: developer
1305503cfb0cSBarry Smith 
1306503cfb0cSBarry Smith .seealso: PetscUseMethod()
1307d382aafbSBarry Smith */
1308d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1309d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1310d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1311d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1312d382aafbSBarry Smith   }
1313503cfb0cSBarry Smith 
1314503cfb0cSBarry Smith /*
1315503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1316503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1317503cfb0cSBarry Smith 
1318503cfb0cSBarry Smith    Level: developer
1319503cfb0cSBarry Smith 
1320503cfb0cSBarry Smith .seealso: PetscTryMethod()
1321503cfb0cSBarry Smith */
1322d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1323d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1324d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1325d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1326703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1327d382aafbSBarry Smith   }
1328503cfb0cSBarry Smith 
1329d382aafbSBarry Smith /*
1330d382aafbSBarry Smith     Functions that can act on any PETSc object.
1331d382aafbSBarry Smith */
1332*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1333*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1334*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1335*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1336*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []);
1337*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision);
1338*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1339*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1340*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1341*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
1342*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1343*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1344*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1345*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1346*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1347*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1348*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
1349*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
1350*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1351*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1352*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *);
1353*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
1354*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1355*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
1356*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
1357*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
1358*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject);
1359*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject);
1360*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
1361d382aafbSBarry Smith 
1362d382aafbSBarry Smith /*MC
1363d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1364d382aafbSBarry Smith 
1365eca87e8dSBarry Smith     Synopsis:
1366eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1367eca87e8dSBarry Smith 
1368ad4df100SBarry Smith    Logically Collective on PetscObject
1369d382aafbSBarry Smith 
1370d382aafbSBarry Smith    Input Parameters:
1371d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1372d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1373d382aafbSBarry Smith .  name - name associated with the child function
1374d382aafbSBarry Smith .  fname - name of the function
1375d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1376d382aafbSBarry Smith 
1377d382aafbSBarry Smith    Level: advanced
1378d382aafbSBarry Smith 
1379d382aafbSBarry Smith 
1380d382aafbSBarry Smith    Notes:
1381d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1382d382aafbSBarry Smith 
1383d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1384d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1385d382aafbSBarry Smith 
1386d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
138720de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1388d382aafbSBarry Smith    enabled.
1389d382aafbSBarry Smith 
1390d382aafbSBarry Smith    Concepts: objects^composing functions
1391d382aafbSBarry Smith    Concepts: composing functions
1392d382aafbSBarry Smith    Concepts: functions^querying
1393d382aafbSBarry Smith    Concepts: objects^querying
1394d382aafbSBarry Smith    Concepts: querying objects
1395d382aafbSBarry Smith 
1396d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1397d382aafbSBarry Smith M*/
1398d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1399d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1400d382aafbSBarry Smith #else
1401d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1402d382aafbSBarry Smith #endif
1403d382aafbSBarry Smith 
1404*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
1405*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1406*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1407*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1408*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1409*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAMSPublish(PetscObject);
1410*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectUnPublish(PetscObject);
1411*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1412*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1413*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1414*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1415*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
1416*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1417*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1418*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1419d382aafbSBarry Smith 
1420d382aafbSBarry Smith /*
1421d382aafbSBarry Smith     Defines PETSc error handling.
1422d382aafbSBarry Smith */
1423d382aafbSBarry Smith #include "petscerror.h"
1424d382aafbSBarry Smith 
1425d382aafbSBarry Smith /*S
1426503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1427d382aafbSBarry Smith 
14281d0fab5eSBarry Smith    Level: developer
1429d382aafbSBarry Smith 
14301d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14311d0fab5eSBarry Smith 
14322981ebdbSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList
1433d382aafbSBarry Smith S*/
1434d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1435d382aafbSBarry Smith 
1436*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDestroy(PetscOList*);
1437*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListFind(PetscOList,const char[],PetscObject*);
1438*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
1439*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListAdd(PetscOList *,const char[],PetscObject);
1440*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListRemoveReference(PetscOList *,const char[]);
1441*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDuplicate(PetscOList,PetscOList *);
1442d382aafbSBarry Smith 
1443d382aafbSBarry Smith /*
1444503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1445d382aafbSBarry Smith   link libraries that will be loaded as needed.
1446d382aafbSBarry Smith */
1447*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
1448*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDestroy(PetscFList*);
1449*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
1450*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1451d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1452d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1453d382aafbSBarry Smith #else
1454d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1455d382aafbSBarry Smith #endif
1456*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDuplicate(PetscFList,PetscFList *);
1457*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListView(PetscFList,PetscViewer);
1458*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListConcat(const char [],const char [],char []);
1459*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListGet(PetscFList,char ***,int*);
1460d382aafbSBarry Smith 
146148703020SDmitry Karpeev /*
146248703020SDmitry Karpeev     Multiple dispatch operation function lists. Lists of names of routines with corresponding
146348703020SDmitry Karpeev     argument type names with function pointers or in dynamic link libraries that will be loaded
146448703020SDmitry Karpeev     as needed.  Search on the op name and argument type names.
146548703020SDmitry Karpeev */
1466*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]);
1467*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListDestroy(PetscOpFList*);
1468*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]);
1469*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListView(PetscOpFList,PetscViewer);
14702981ebdbSBarry Smith 
1471d382aafbSBarry Smith /*S
1472d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1473d382aafbSBarry Smith 
1474d382aafbSBarry Smith    Level: advanced
1475d382aafbSBarry Smith 
147620de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1477d382aafbSBarry Smith 
1478d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1479d382aafbSBarry Smith S*/
1480d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1481*014dd563SJed Brown PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;
1482*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1483*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1484*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1485*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1486*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
1487*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1488*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1489d382aafbSBarry Smith 
1490d382aafbSBarry Smith /*
1491a5a3d712SDmitry Karpeev   PetscShell support.  Needs to be better documented.
149205846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
149305846914SDmitry Karpeev */
1494a5a3d712SDmitry Karpeev #include "petscshell.h"
149505846914SDmitry Karpeev 
149605846914SDmitry Karpeev /*
1497d382aafbSBarry Smith      Useful utility routines
1498d382aafbSBarry Smith */
1499*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1500*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1501*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1502*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1503*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1504*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
1505d382aafbSBarry Smith 
1506503cfb0cSBarry Smith /*
1507ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1508503cfb0cSBarry Smith 
1509503cfb0cSBarry Smith     Notes: This is useful in cases like
1510503cfb0cSBarry Smith $     int        *a;
1511ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1512ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1513503cfb0cSBarry Smith */
1514d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1515503cfb0cSBarry Smith 
1516d382aafbSBarry Smith /*
1517d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1518d382aafbSBarry Smith */
1519d382aafbSBarry Smith #include "petscdraw.h"
1520d382aafbSBarry Smith 
1521d382aafbSBarry Smith /*
1522d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1523d382aafbSBarry Smith */
1524b45d2f2cSJed Brown #include "petsc-private/petscimpl.h"
1525503cfb0cSBarry Smith 
1526238ccf28SShri Abhyankar 
1527d382aafbSBarry Smith /*MC
1528d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1529d382aafbSBarry Smith 
1530d382aafbSBarry Smith    Synopsis:
1531d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1532d382aafbSBarry Smith 
1533eca87e8dSBarry Smith     Not Collective
1534eca87e8dSBarry Smith 
1535d382aafbSBarry Smith     Input Parameters:
1536d382aafbSBarry Smith .   format - the usual printf() format string
1537d382aafbSBarry Smith 
1538d382aafbSBarry Smith    Options Database Keys:
1539d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1540d382aafbSBarry Smith          (default) stderr
1541d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1542d382aafbSBarry Smith           error is handled.)
1543d382aafbSBarry Smith 
1544d382aafbSBarry Smith    Notes: Use
1545d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1546d382aafbSBarry Smith $                        error is handled.) and
1547d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1548c9a19010SBarry Smith $        of you can use your own function
1549d382aafbSBarry Smith 
1550d382aafbSBarry Smith           Use
1551d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1552d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1553d382aafbSBarry Smith 
1554d382aafbSBarry Smith           Use
1555d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1556d382aafbSBarry Smith 
1557d382aafbSBarry Smith    Level: developer
1558d382aafbSBarry Smith 
1559d382aafbSBarry Smith     Fortran Note:
1560d382aafbSBarry Smith     This routine is not supported in Fortran.
1561d382aafbSBarry Smith 
1562d382aafbSBarry Smith     Concepts: error messages^printing
1563d382aafbSBarry Smith     Concepts: printing^error messages
1564d382aafbSBarry Smith 
1565c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1566d382aafbSBarry Smith M*/
1567*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1568d382aafbSBarry Smith 
1569d382aafbSBarry Smith /*MC
1570d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1571d382aafbSBarry Smith 
1572d382aafbSBarry Smith    Synopsis:
1573d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1574d382aafbSBarry Smith 
1575eca87e8dSBarry Smith     Not Collective
1576eca87e8dSBarry Smith 
1577d382aafbSBarry Smith     Input Parameters:
1578d382aafbSBarry Smith .   format - the usual printf() format string
1579d382aafbSBarry Smith 
1580d382aafbSBarry Smith    Level: developer
1581d382aafbSBarry Smith 
1582d382aafbSBarry Smith     Fortran Note:
1583d382aafbSBarry Smith     This routine is not supported in Fortran.
1584d382aafbSBarry Smith 
1585d382aafbSBarry Smith     Concepts: help messages^printing
1586d382aafbSBarry Smith     Concepts: printing^help messages
1587d382aafbSBarry Smith 
1588d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1589d382aafbSBarry Smith M*/
1590*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1591d382aafbSBarry Smith 
1592fcfd50ebSBarry Smith /*
1593fcfd50ebSBarry Smith      Defines PETSc profiling.
1594fcfd50ebSBarry Smith */
1595fcfd50ebSBarry Smith #include "petsclog.h"
1596fcfd50ebSBarry Smith 
1597fcfd50ebSBarry Smith /*
1598fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1599fcfd50ebSBarry Smith */
1600fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1601*014dd563SJed Brown PETSC_EXTERN PetscBool PetscAMSPublishAll;
1602fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1603fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1604fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1605fcfd50ebSBarry Smith #else
1606fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1607fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1608fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1609fcfd50ebSBarry Smith #endif
1610fcfd50ebSBarry Smith 
1611fcfd50ebSBarry Smith /*
1612fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1613fcfd50ebSBarry Smith */
1614*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1615*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1616*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
1617*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1618*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...);
1619*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...);
1620*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1621fcfd50ebSBarry Smith 
1622fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1623fcfd50ebSBarry Smith #include <stdarg.h>
1624*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1625*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list);
1626*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list);
1627fcfd50ebSBarry Smith 
1628fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1629*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1630fcfd50ebSBarry Smith #endif
1631fcfd50ebSBarry Smith 
1632*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...);
1633*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...);
1634*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1635d382aafbSBarry Smith 
1636d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
1637*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
1638*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*);
1639d382aafbSBarry Smith #endif
1640d382aafbSBarry Smith 
1641*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...);
1642*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
1643*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm);
1644*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1645*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1646*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1647*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1648d382aafbSBarry Smith 
1649*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1650d382aafbSBarry Smith 
1651d382aafbSBarry Smith /*S
1652d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1653d382aafbSBarry Smith 
1654d382aafbSBarry Smith    Level: advanced
1655d382aafbSBarry Smith 
1656d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1657d382aafbSBarry Smith S*/
1658*014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1659d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
1660*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **);
1661*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *);
1662*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1663*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *);
1664*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1665d382aafbSBarry Smith 
1666d382aafbSBarry Smith /*
1667d382aafbSBarry Smith    For use in debuggers
1668d382aafbSBarry Smith */
1669*014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1670*014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1671*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1672*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1673*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1674d382aafbSBarry Smith 
1675d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1676d382aafbSBarry Smith #include <memory.h>
1677d382aafbSBarry Smith #endif
1678d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1679d382aafbSBarry Smith #include <stdlib.h>
1680d382aafbSBarry Smith #endif
1681d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1682d382aafbSBarry Smith #include <strings.h>
1683d382aafbSBarry Smith #endif
1684d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1685d382aafbSBarry Smith #include <string.h>
1686d382aafbSBarry Smith #endif
16876c7e564aSBarry Smith 
16884a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1689d382aafbSBarry Smith #include <xmmintrin.h>
1690d382aafbSBarry Smith #endif
1691d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1692d382aafbSBarry Smith #include <stdint.h>
1693d382aafbSBarry Smith #endif
1694d382aafbSBarry Smith 
1695fcfd50ebSBarry Smith #undef __FUNCT__
1696fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1697d382aafbSBarry Smith /*@C
1698d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1699d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1700d382aafbSBarry Smith    PetscMemmove() in that case.
1701d382aafbSBarry Smith 
1702d382aafbSBarry Smith    Not Collective
1703d382aafbSBarry Smith 
1704d382aafbSBarry Smith    Input Parameters:
1705d382aafbSBarry Smith +  b - pointer to initial memory space
1706d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1707d382aafbSBarry Smith 
1708d382aafbSBarry Smith    Output Parameter:
1709d382aafbSBarry Smith .  a - pointer to copy space
1710d382aafbSBarry Smith 
1711d382aafbSBarry Smith    Level: intermediate
1712d382aafbSBarry Smith 
1713d382aafbSBarry Smith    Compile Option:
1714d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1715d382aafbSBarry Smith                                   for memory copies on double precision values.
1716d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1717d382aafbSBarry Smith                                   for memory copies on double precision values.
1718d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1719d382aafbSBarry Smith                                   for memory copies on double precision values.
1720d382aafbSBarry Smith 
1721d382aafbSBarry Smith    Note:
1722d382aafbSBarry Smith    This routine is analogous to memcpy().
1723d382aafbSBarry Smith 
1724503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1725503cfb0cSBarry Smith 
1726d382aafbSBarry Smith   Concepts: memory^copying
1727d382aafbSBarry Smith   Concepts: copying^memory
1728d382aafbSBarry Smith 
1729d382aafbSBarry Smith .seealso: PetscMemmove()
1730d382aafbSBarry Smith 
1731d382aafbSBarry Smith @*/
17327087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1733d382aafbSBarry Smith {
1734d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1735d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1736d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1737a7e36092SMatthew G Knepley   PetscFunctionBegin;
1738e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1739e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1740a7e36092SMatthew G Knepley #else
1741d382aafbSBarry Smith   PetscFunctionBegin;
1742a7e36092SMatthew G Knepley #endif
1743d382aafbSBarry Smith   if (a != b) {
1744d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1745e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1746d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1747d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1748d382aafbSBarry Smith #endif
1749d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1750d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1751d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1752d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1753d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1754d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1755d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1756d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1757d382aafbSBarry Smith #else
1758d382aafbSBarry Smith       size_t      i;
1759d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1760d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1761d382aafbSBarry Smith #endif
1762d382aafbSBarry Smith     } else {
1763d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1764d382aafbSBarry Smith     }
1765d382aafbSBarry Smith #else
1766d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1767d382aafbSBarry Smith #endif
1768d382aafbSBarry Smith   }
1769d382aafbSBarry Smith   PetscFunctionReturn(0);
1770d382aafbSBarry Smith }
1771d382aafbSBarry Smith 
1772d382aafbSBarry Smith /*@C
1773d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1774d382aafbSBarry Smith 
1775d382aafbSBarry Smith    Not Collective
1776d382aafbSBarry Smith 
1777d382aafbSBarry Smith    Input Parameters:
1778d382aafbSBarry Smith +  a - pointer to beginning memory location
1779d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1780d382aafbSBarry Smith 
1781d382aafbSBarry Smith    Level: intermediate
1782d382aafbSBarry Smith 
1783d382aafbSBarry Smith    Compile Option:
1784d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1785d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1786d382aafbSBarry Smith 
1787503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1788503cfb0cSBarry Smith 
1789d382aafbSBarry Smith    Concepts: memory^zeroing
1790d382aafbSBarry Smith    Concepts: zeroing^memory
1791d382aafbSBarry Smith 
1792d382aafbSBarry Smith .seealso: PetscMemcpy()
1793d382aafbSBarry Smith @*/
17947087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1795d382aafbSBarry Smith {
1796d382aafbSBarry Smith   if (n > 0) {
1797d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1798e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1799d382aafbSBarry Smith #endif
1800d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1801d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1802d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1803d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1804d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1805d382aafbSBarry Smith     } else {
1806d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1807d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1808d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1809d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1810d382aafbSBarry Smith     } else {
1811d382aafbSBarry Smith #endif
1812d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1813d382aafbSBarry Smith       bzero((char *)a,n);
1814d382aafbSBarry Smith #else
1815d382aafbSBarry Smith       memset((char*)a,0,n);
1816d382aafbSBarry Smith #endif
1817d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1818d382aafbSBarry Smith     }
1819d382aafbSBarry Smith #endif
1820d382aafbSBarry Smith   }
1821d382aafbSBarry Smith   return 0;
1822d382aafbSBarry Smith }
1823d382aafbSBarry Smith 
1824d382aafbSBarry Smith /*MC
1825d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1826d382aafbSBarry Smith 
1827eca87e8dSBarry Smith    Synopsis:
1828eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1829eca87e8dSBarry Smith 
1830d382aafbSBarry Smith    Not Collective
1831d382aafbSBarry Smith 
1832d382aafbSBarry Smith    Input Parameters:
1833d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1834d382aafbSBarry Smith .  n - number of elements to fetch
1835d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
183650d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1837d382aafbSBarry Smith 
1838d382aafbSBarry Smith    Level: developer
1839d382aafbSBarry Smith 
1840d382aafbSBarry Smith    Notes:
1841d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1842d382aafbSBarry Smith 
184350d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
184450d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
184550d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
184663cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
184763cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
184863cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1849d382aafbSBarry Smith 
1850d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1851d382aafbSBarry Smith    address).
1852d382aafbSBarry Smith 
1853d382aafbSBarry Smith    Concepts: memory
1854d382aafbSBarry Smith M*/
1855d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1856d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1857d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1858d382aafbSBarry Smith   } while (0)
1859d382aafbSBarry Smith 
1860d382aafbSBarry Smith /*
1861e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1862d382aafbSBarry Smith */
1863d382aafbSBarry Smith #include "petscmatlab.h"
1864d382aafbSBarry Smith 
1865d382aafbSBarry Smith /*
1866d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1867d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1868d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1869d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1870e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1871d382aafbSBarry Smith */
1872d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1873d382aafbSBarry Smith 
1874d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1875d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1876d382aafbSBarry Smith #endif
1877d382aafbSBarry Smith 
18785a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18795a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1880d382aafbSBarry Smith #endif
1881d382aafbSBarry Smith 
1882d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1883d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1884d382aafbSBarry Smith #endif
1885d382aafbSBarry Smith 
1886d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1887d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1888d382aafbSBarry Smith #endif
1889d382aafbSBarry Smith 
1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1892d382aafbSBarry Smith #endif
1893d382aafbSBarry Smith 
1894d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1895d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1896d382aafbSBarry Smith #endif
1897d382aafbSBarry Smith 
1898d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1899d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1900d382aafbSBarry Smith #endif
1901d382aafbSBarry Smith 
1902d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1903d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1904d382aafbSBarry Smith #endif
1905d382aafbSBarry Smith 
1906d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1907d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1908d382aafbSBarry Smith #endif
1909d382aafbSBarry Smith 
1910d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1911d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1912d382aafbSBarry Smith #endif
1913d382aafbSBarry Smith 
1914d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1915d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1916d382aafbSBarry Smith #endif
1917d382aafbSBarry Smith 
1918d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1919d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1920d382aafbSBarry Smith #endif
1921d382aafbSBarry Smith 
1922d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1923d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1924d382aafbSBarry Smith #endif
1925d382aafbSBarry Smith 
1926d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1927d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1928d382aafbSBarry Smith #endif
1929d382aafbSBarry Smith 
1930d382aafbSBarry Smith #endif
1931d382aafbSBarry Smith 
1932d382aafbSBarry Smith /*
1933d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1934d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1935d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1936d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1937d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1938d382aafbSBarry Smith */
1939d382aafbSBarry Smith #if defined(__cplusplus)
1940*014dd563SJed Brown #define PETSC_EXTERN_C extern "C" PETSC_VISIBILITY_PUBLIC
1941d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1942d382aafbSBarry Smith #define EXTERN_C_END }
1943d382aafbSBarry Smith #else
1944*014dd563SJed Brown #define PETSC_EXTERN_C PETSC_EXTERN
1945d382aafbSBarry Smith #define EXTERN_C_BEGIN
1946d382aafbSBarry Smith #define EXTERN_C_END
1947d382aafbSBarry Smith #endif
1948d382aafbSBarry Smith 
1949d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1950d382aafbSBarry Smith 
1951d382aafbSBarry Smith /*MC
1952d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1953d382aafbSBarry Smith         communication
1954d382aafbSBarry Smith 
1955d382aafbSBarry Smith    Level: beginner
1956d382aafbSBarry Smith 
1957d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1958d382aafbSBarry Smith 
1959d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1960d382aafbSBarry Smith M*/
1961d382aafbSBarry Smith 
1962d382aafbSBarry Smith /*MC
1963d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1964d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1965d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1966d382aafbSBarry Smith 
1967d382aafbSBarry Smith 
1968d382aafbSBarry Smith    Level: beginner
1969d382aafbSBarry Smith 
1970d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1971d382aafbSBarry Smith M*/
1972d382aafbSBarry Smith 
1973d382aafbSBarry Smith /*MC
1974d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1975d382aafbSBarry Smith 
1976d382aafbSBarry Smith    Level: beginner
1977d382aafbSBarry Smith 
1978d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1979d382aafbSBarry Smith M*/
1980d382aafbSBarry Smith 
1981d382aafbSBarry Smith /*MC
1982d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1983d382aafbSBarry Smith    Level: beginner
1984d382aafbSBarry Smith 
1985d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1986d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1987d382aafbSBarry Smith 
1988d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1989d382aafbSBarry Smith M*/
1990d382aafbSBarry Smith 
1991d382aafbSBarry Smith /*MC
1992d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
1993d382aafbSBarry Smith 
1994d382aafbSBarry Smith    Level: beginner
1995d382aafbSBarry Smith 
1996d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
1997d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1998d382aafbSBarry Smith 
1999d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2000d382aafbSBarry Smith M*/
2001d382aafbSBarry Smith 
2002d382aafbSBarry Smith /*MC
2003d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2004d382aafbSBarry Smith 
2005d382aafbSBarry Smith    Level: beginner
2006d382aafbSBarry Smith 
2007d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2008d382aafbSBarry Smith           pass this value
2009d382aafbSBarry Smith 
2010d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2011d382aafbSBarry Smith M*/
2012d382aafbSBarry Smith 
2013d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2014d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2015*014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2016*014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2017d382aafbSBarry Smith #else
2018d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2019d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2020d382aafbSBarry Smith #endif
2021d382aafbSBarry Smith #endif
2022d382aafbSBarry Smith 
2023d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2024d382aafbSBarry Smith 
2025d382aafbSBarry Smith /* Limit MPI to 32-bits */
2026d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2027d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2028d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2029d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2030d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2031d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2032d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2033d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2034d382aafbSBarry Smith 
2035d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2036e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2037e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2038eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2039eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2040d382aafbSBarry Smith 
2041d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2042e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2043eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2044d382aafbSBarry Smith #else
2045d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2046d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2047d382aafbSBarry Smith #endif
2048d382aafbSBarry Smith 
2049d382aafbSBarry Smith #else
2050d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2051d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2052d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2053d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2054d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2055d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2056d382aafbSBarry Smith #endif
2057d382aafbSBarry Smith 
2058d382aafbSBarry Smith /*
20592981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2060d382aafbSBarry Smith */
2061d382aafbSBarry Smith #if defined(hz)
2062d382aafbSBarry Smith #undef hz
2063d382aafbSBarry Smith #endif
2064d382aafbSBarry Smith 
2065d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2066d382aafbSBarry Smith 
2067d382aafbSBarry Smith 
2068d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2069d382aafbSBarry Smith #include <limits.h>
2070d382aafbSBarry Smith #endif
2071d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2072d382aafbSBarry Smith #include <sys/param.h>
2073d382aafbSBarry Smith #endif
2074d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2075d382aafbSBarry Smith #include <sys/types.h>
2076d382aafbSBarry Smith #endif
2077d382aafbSBarry Smith #if defined(MAXPATHLEN)
2078d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2079d382aafbSBarry Smith #elif defined(MAX_PATH)
2080d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2081d382aafbSBarry Smith #elif defined(_MAX_PATH)
2082d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2083d382aafbSBarry Smith #else
2084d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2085d382aafbSBarry Smith #endif
2086d382aafbSBarry Smith 
2087d382aafbSBarry Smith /* Special support for C++ */
2088d382aafbSBarry Smith #include "petscsys.hh"
20896c7e564aSBarry Smith 
2090d382aafbSBarry Smith /*MC
2091d382aafbSBarry Smith 
2092d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2093d382aafbSBarry Smith 
2094d382aafbSBarry Smith $    1) classic Fortran 77 style
2095d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2096d382aafbSBarry Smith $       XXX variablename
2097d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2098d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2099d382aafbSBarry Smith $
2100d382aafbSBarry Smith $    2) classic Fortran 90 style
2101d1716517SSatish Balay $#include "finclude/petscXXX.h"
2102d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2103d382aafbSBarry Smith $       XXX variablename
2104d382aafbSBarry Smith $
2105d382aafbSBarry Smith $    3) Using Fortran modules
2106d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2107d382aafbSBarry Smith $         use petscXXXX
2108d382aafbSBarry Smith $       XXX variablename
2109d382aafbSBarry Smith $
2110d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2111d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2112d382aafbSBarry Smith $         use petscXXXX
2113d382aafbSBarry Smith $       type(XXX) variablename
2114e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2115d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2116d382aafbSBarry Smith 
2117d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2118d382aafbSBarry Smith 
2119d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2120d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2121d382aafbSBarry Smith $        integer variablename
2122d382aafbSBarry Smith $
2123d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2124d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2125d382aafbSBarry Smith 
2126d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2127d382aafbSBarry Smith for only a few PETSc functions.
2128d382aafbSBarry Smith 
2129d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2130d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2131d382aafbSBarry Smith you cannot have something like
2132d382aafbSBarry Smith $      PetscInt row,col
2133d382aafbSBarry Smith $      PetscScalar val
2134d382aafbSBarry Smith $        ...
2135d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2136d382aafbSBarry Smith You must instead have
2137d382aafbSBarry Smith $      PetscInt row(1),col(1)
2138d382aafbSBarry Smith $      PetscScalar val(1)
2139d382aafbSBarry Smith $        ...
2140d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2141d382aafbSBarry Smith 
2142d382aafbSBarry Smith 
2143d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2144d382aafbSBarry Smith 
2145d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2146d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2147d382aafbSBarry Smith 
2148d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2149d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2150d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2151d382aafbSBarry Smith 
2152d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2153e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2154d382aafbSBarry Smith 
2155d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2156d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2157d382aafbSBarry Smith 
2158d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2159d382aafbSBarry Smith      automatically by "make allfortranstubs".
2160d382aafbSBarry Smith 
2161e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2162d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2163d382aafbSBarry Smith      include their predecessors
2164d382aafbSBarry Smith 
2165d382aafbSBarry Smith     Level: beginner
2166d382aafbSBarry Smith 
2167d382aafbSBarry Smith M*/
2168d382aafbSBarry Smith 
2169*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2170*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2171*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2172*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2173*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2174*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
2175d382aafbSBarry Smith 
2176*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2177*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
2178*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2179*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2180*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2181*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
2182*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
2183*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
2184*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
2185*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2186*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2187*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2188*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2189*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2190d382aafbSBarry Smith 
2191*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2192*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2193d382aafbSBarry Smith 
219476bdecfbSBarry Smith /*J
2195d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2196d382aafbSBarry Smith        with an optional dynamic library name, for example
2197d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2198d382aafbSBarry Smith 
2199d382aafbSBarry Smith    Level: beginner
2200d382aafbSBarry Smith 
2201e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2202d382aafbSBarry Smith    with the option --download-sprng
2203d382aafbSBarry Smith 
2204d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
220576bdecfbSBarry Smith J*/
2206d382aafbSBarry Smith #define PetscRandomType char*
2207d382aafbSBarry Smith #define PETSCRAND       "rand"
2208d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2209d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2210d382aafbSBarry Smith 
2211d382aafbSBarry Smith /* Logging support */
2212*014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2213d382aafbSBarry Smith 
2214*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]);
2215d382aafbSBarry Smith 
2216d382aafbSBarry Smith /*S
2217d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2218d382aafbSBarry Smith 
2219d382aafbSBarry Smith    Level: intermediate
2220d382aafbSBarry Smith 
2221d382aafbSBarry Smith   Concepts: random numbers
2222d382aafbSBarry Smith 
2223d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2224d382aafbSBarry Smith S*/
2225d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2226d382aafbSBarry Smith 
2227d382aafbSBarry Smith /* Dynamic creation and loading functions */
2228*014dd563SJed Brown PETSC_EXTERN PetscFList PetscRandomList;
2229*014dd563SJed Brown PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled;
2230d382aafbSBarry Smith 
2231*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []);
2232*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
2233*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void);
2234*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, const PetscRandomType);
2235*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
2236*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, const PetscRandomType*);
2237*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,char*);
2238*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2239d382aafbSBarry Smith 
2240d382aafbSBarry Smith /*MC
2241d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2242d382aafbSBarry Smith 
2243d382aafbSBarry Smith   Synopsis:
22441890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2245d382aafbSBarry Smith 
2246d382aafbSBarry Smith   Not Collective
2247d382aafbSBarry Smith 
2248d382aafbSBarry Smith   Input Parameters:
2249d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2250d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2251d382aafbSBarry Smith . func_name   - The name of routine to create method context
2252d382aafbSBarry Smith - create_func - The creation routine itself
2253d382aafbSBarry Smith 
2254d382aafbSBarry Smith   Notes:
2255d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2256d382aafbSBarry Smith 
2257d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2258d382aafbSBarry Smith 
2259d382aafbSBarry Smith   Sample usage:
2260d382aafbSBarry Smith .vb
2261d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2262d382aafbSBarry Smith .ve
2263d382aafbSBarry Smith 
2264d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2265d382aafbSBarry Smith .vb
2266d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2267d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2268d382aafbSBarry Smith .ve
2269d382aafbSBarry Smith    or at runtime via the option
2270d382aafbSBarry Smith .vb
2271d382aafbSBarry Smith     -random_type my_random_name
2272d382aafbSBarry Smith .ve
2273d382aafbSBarry Smith 
2274d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2275d382aafbSBarry Smith 
2276d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2277d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2278d382aafbSBarry Smith 
2279d382aafbSBarry Smith   Level: advanced
2280d382aafbSBarry Smith 
2281d382aafbSBarry Smith .keywords: PetscRandom, register
2282d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2283d382aafbSBarry Smith M*/
2284d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2285d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2286d382aafbSBarry Smith #else
2287d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2288d382aafbSBarry Smith #endif
2289d382aafbSBarry Smith 
2290*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2291*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2292*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2293*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2294*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2295*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2296*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2297*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2298*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2299d382aafbSBarry Smith 
2300*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2301*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2302*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2303*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2304*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2305*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2306*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
2307d382aafbSBarry Smith 
2308*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType);
2309*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
2310*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
2311*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
2312*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2313*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2314*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool  *);
2315*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
2316*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2317*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2318*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2319*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*);
2320*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int);
2321d382aafbSBarry Smith 
2322d382aafbSBarry Smith /*
2323d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2324d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2325d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2326d382aafbSBarry Smith   PetscBinarySeek().
2327d382aafbSBarry Smith */
2328d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2329d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2330d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2331d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2332d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2333d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2334d382aafbSBarry Smith 
2335d382aafbSBarry Smith /*E
2336d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2337d382aafbSBarry Smith 
2338d382aafbSBarry Smith   Level: advanced
2339d382aafbSBarry Smith 
2340d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2341d382aafbSBarry Smith E*/
2342d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
2343*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2344*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2345*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2346d382aafbSBarry Smith 
2347*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2348*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool );
2349*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2350*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2351*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2352*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
2353d382aafbSBarry Smith 
2354*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2355*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2356*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2357*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2358*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2359d382aafbSBarry Smith 
2360*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2361d382aafbSBarry Smith 
2362d382aafbSBarry Smith /*E
2363d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2364d382aafbSBarry Smith 
2365d382aafbSBarry Smith   Level: beginner
2366d382aafbSBarry Smith 
2367d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2368d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2369d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2370d382aafbSBarry Smith E*/
237111f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2372d382aafbSBarry Smith 
2373d382aafbSBarry Smith /*MC
2374d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2375d382aafbSBarry Smith 
2376d382aafbSBarry Smith     Level: beginner
2377d382aafbSBarry Smith 
2378d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2379eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2380eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2381d382aafbSBarry Smith 
2382d382aafbSBarry Smith M*/
2383d382aafbSBarry Smith 
2384d382aafbSBarry Smith /*MC
2385d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2386d382aafbSBarry Smith                 value into that location
2387d382aafbSBarry Smith 
2388d382aafbSBarry Smith     Level: beginner
2389d382aafbSBarry Smith 
2390d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2391eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2392eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2393d382aafbSBarry Smith 
2394d382aafbSBarry Smith M*/
2395d382aafbSBarry Smith 
2396d382aafbSBarry Smith /*MC
2397d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2398d382aafbSBarry Smith 
2399d382aafbSBarry Smith     Level: beginner
2400d382aafbSBarry Smith 
2401d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2402d382aafbSBarry Smith 
2403d382aafbSBarry Smith M*/
2404d382aafbSBarry Smith 
2405d382aafbSBarry Smith /*S
2406d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2407d382aafbSBarry Smith 
2408d382aafbSBarry Smith    Level: advanced
2409d382aafbSBarry Smith 
2410d382aafbSBarry Smith    Concepts: communicator, create
2411d382aafbSBarry Smith S*/
2412d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2413d382aafbSBarry Smith 
2414d382aafbSBarry Smith struct _n_PetscSubcomm {
2415d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2416d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2417d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2418d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2419d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2420d382aafbSBarry Smith };
2421d382aafbSBarry Smith 
2422638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2423*014dd563SJed Brown PETSC_EXTERN const char *PetscSubcommTypes[];
2424638faf0bSHong Zhang 
2425*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2426*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2427*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2428*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
2429*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2430d382aafbSBarry Smith 
243182a7e548SBarry Smith #include <petscctable.h>
243282a7e548SBarry Smith 
24336c7e564aSBarry Smith 
24349e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24359e03d832SJed Brown #undef __FUNCT__
24369e03d832SJed Brown #define __FUNCT__ "User provided function"
24379e03d832SJed Brown 
2438d382aafbSBarry Smith #endif
2439