1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 112981ebdbSBarry Smith in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/ 122981ebdbSBarry Smith does not exist and petscconf.h is in the same directory as the other PETSc include files. 13d382aafbSBarry Smith */ 14d382aafbSBarry Smith #include "petscconf.h" 15d382aafbSBarry Smith #include "petscfix.h" 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith #endif 25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith #define _BSD_SOURCE 2773fca5a0SBarry Smith #endif 28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 29ea0fecefSShri Abhyankar #define _GNU_SOURCE 30ea0fecefSShri Abhyankar #endif 3173fca5a0SBarry Smith #endif 3273fca5a0SBarry Smith 33d382aafbSBarry Smith /* ========================================================================== */ 34d382aafbSBarry Smith /* 352981ebdbSBarry Smith This facilitates using the C version of PETSc from C++ and the 36e2e64c6bSBarry Smith C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 37d382aafbSBarry Smith */ 38d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 39d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 40d382aafbSBarry Smith #endif 411ec50b02SJed Brown 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48*014dd563SJed Brown #if defined(_WIN32) /* For Win32 shared libraries */ 49*014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 50*014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 51*014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY) 52*014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 53*014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 54d382aafbSBarry Smith #else 55*014dd563SJed Brown # define PETSC_DLLEXPORT 56*014dd563SJed Brown # define PETSC_DLLIMPORT 57*014dd563SJed Brown #endif 58*014dd563SJed Brown 59*014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 60*014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 61*014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 62*014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 63*014dd563SJed Brown #endif 64*014dd563SJed Brown 65*014dd563SJed Brown #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 66*014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 67*014dd563SJed Brown #else 68*014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 69d382aafbSBarry Smith #endif 70d382aafbSBarry Smith /* ========================================================================== */ 71d382aafbSBarry Smith /* 72d382aafbSBarry Smith Current PETSc version number and release date. Also listed in 73d382aafbSBarry Smith Web page 74d382aafbSBarry Smith src/docs/tex/manual/intro.tex, 75d382aafbSBarry Smith src/docs/tex/manual/manual.tex. 76d382aafbSBarry Smith src/docs/website/index.html. 77d382aafbSBarry Smith */ 78d382aafbSBarry Smith #include "petscversion.h" 79301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 80d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1) 81301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \ 82d382aafbSBarry Smith PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 83301d30feSBarry Smith PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE) 84d382aafbSBarry Smith #else 85301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s HG Date: %s", \ 86301d30feSBarry Smith PETSC_VERSION_HG, PETSC_VERSION_DATE_HG) 87d382aafbSBarry Smith #endif 88d382aafbSBarry Smith 89d382aafbSBarry Smith /*MC 90d382aafbSBarry Smith PetscGetVersion - Gets the PETSc version information in a string. 91d382aafbSBarry Smith 92d382aafbSBarry Smith Input Parameter: 93d382aafbSBarry Smith . len - length of the string 94d382aafbSBarry Smith 95d382aafbSBarry Smith Output Parameter: 96d382aafbSBarry Smith . version - version string 97d382aafbSBarry Smith 98d382aafbSBarry Smith Level: developer 99d382aafbSBarry Smith 100d382aafbSBarry Smith Usage: 101d382aafbSBarry Smith char version[256]; 102d382aafbSBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 103d382aafbSBarry Smith 104d382aafbSBarry Smith Fortran Note: 105d382aafbSBarry Smith This routine is not supported in Fortran. 106d382aafbSBarry Smith 107d382aafbSBarry Smith .seealso: PetscGetProgramName() 108d382aafbSBarry Smith 109d382aafbSBarry Smith M*/ 110d382aafbSBarry Smith 111d382aafbSBarry Smith /* ========================================================================== */ 112d382aafbSBarry Smith 113d382aafbSBarry Smith /* 114d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 115d382aafbSBarry Smith 116d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 117d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 118d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 119d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 120d382aafbSBarry Smith mpicxx.h directly in their code 121d382aafbSBarry Smith */ 122d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 123d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 124d382aafbSBarry Smith #include "mpi.h" 12565013866SBarry Smith 126d382aafbSBarry Smith /* 1272981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 128d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 129d382aafbSBarry Smith */ 130d382aafbSBarry Smith #include <stdio.h> 131d382aafbSBarry Smith 132d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 133d382aafbSBarry Smith #if !defined(MPIAPI) 134d382aafbSBarry Smith #define MPIAPI 135d382aafbSBarry Smith #endif 136d382aafbSBarry Smith 137b3506946SBarry Smith 138d382aafbSBarry Smith /*MC 139d382aafbSBarry Smith PetscErrorCode - datatype used for return error code from all PETSc functions 140d382aafbSBarry Smith 141d382aafbSBarry Smith Level: beginner 142d382aafbSBarry Smith 143d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 144d382aafbSBarry Smith M*/ 145d382aafbSBarry Smith typedef int PetscErrorCode; 146d382aafbSBarry Smith 147d382aafbSBarry Smith /*MC 148d382aafbSBarry Smith 149503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 150d382aafbSBarry Smith (internal integer in the data structure used for error 1512981ebdbSBarry Smith checking). These are all computed by an offset from the lowest 1520700a824SBarry Smith one, PETSC_SMALLEST_CLASSID. 153d382aafbSBarry Smith 154d382aafbSBarry Smith Level: advanced 155d382aafbSBarry Smith 1560700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 157d382aafbSBarry Smith M*/ 1580700a824SBarry Smith typedef int PetscClassId; 159d382aafbSBarry Smith 160d382aafbSBarry Smith 161d382aafbSBarry Smith /*MC 162d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 163d382aafbSBarry Smith 164d382aafbSBarry Smith Level: intermediate 165d382aafbSBarry Smith 166d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 1673b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 168d382aafbSBarry Smith 1693b2a8c54SBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 1702981ebdbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE error. 171d382aafbSBarry Smith 1723b2a8c54SBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 1732981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error. 174d382aafbSBarry Smith 175d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 176d382aafbSBarry Smith 177d382aafbSBarry Smith M*/ 178d382aafbSBarry Smith typedef int PetscMPIInt; 179d382aafbSBarry Smith 180d382aafbSBarry Smith /*MC 181d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 182d382aafbSBarry Smith 183d382aafbSBarry Smith Level: intermediate 184d382aafbSBarry Smith 185d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 186d382aafbSBarry Smith M*/ 187d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 188d382aafbSBarry Smith 189d382aafbSBarry Smith /*MC 190d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 1913b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 192d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 193d382aafbSBarry Smith 194d382aafbSBarry Smith Level: intermediate 195d382aafbSBarry Smith 196d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 197d382aafbSBarry Smith M*/ 198f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8) 199f505b413SSatish Balay typedef long long Petsc64bitInt; 200f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 201236ed0a3SSatish Balay typedef __int64 Petsc64bitInt; 202236ed0a3SSatish Balay #else 203f505b413SSatish Balay typedef unknown64bit Petsc64bitInt 204236ed0a3SSatish Balay #endif 205d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 206236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt; 207d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT 208d382aafbSBarry Smith #else 209d382aafbSBarry Smith typedef int PetscInt; 210d382aafbSBarry Smith #define MPIU_INT MPI_INT 211d382aafbSBarry Smith #endif 212236ed0a3SSatish Balay 213d382aafbSBarry Smith 214702bc34aSSatish Balay /*MC 215702bc34aSSatish Balay PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 216702bc34aSSatish Balay 217702bc34aSSatish Balay Level: intermediate 218702bc34aSSatish Balay 219702bc34aSSatish Balay Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 220702bc34aSSatish Balay standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 221702bc34aSSatish Balay (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below). 222702bc34aSSatish Balay 223702bc34aSSatish Balay PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 2242981ebdbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE error. 225702bc34aSSatish Balay 226702bc34aSSatish Balay PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2272981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error 228702bc34aSSatish Balay 2292981ebdbSBarry Smith Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc, 230702bc34aSSatish Balay if you run ./configure with the option 231702bc34aSSatish Balay --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib] 2322981ebdbSBarry Smith but you need to also use --known-64-bit-blas-indices. 2332981ebdbSBarry Smith 2342981ebdbSBarry Smith MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices 2352981ebdbSBarry Smith 2362981ebdbSBarry Smith Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK. 237702bc34aSSatish Balay 238702bc34aSSatish Balay External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot 239702bc34aSSatish Balay be used with PETSc if you have set PetscBLASInt to long int. 240702bc34aSSatish Balay 241702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt 242702bc34aSSatish Balay 243702bc34aSSatish Balay M*/ 244702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES) 245702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt; 246702bc34aSSatish Balay #else 247702bc34aSSatish Balay typedef int PetscBLASInt; 248702bc34aSSatish Balay #endif 249702bc34aSSatish Balay 25058b60935SBarry Smith /*EC 25158b60935SBarry Smith 2522981ebdbSBarry Smith PetscPrecision - indicates what precision the object is using. This is currently not used. 25358b60935SBarry Smith 25458b60935SBarry Smith Level: advanced 25558b60935SBarry Smith 25658b60935SBarry Smith .seealso: PetscObjectSetPrecision() 25758b60935SBarry Smith E*/ 25858b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision; 259*014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[]; 26058b60935SBarry Smith 261503cfb0cSBarry Smith /* 262503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 263503cfb0cSBarry Smith */ 264d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 265d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT 266d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 267d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG 268d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 269d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT 270d382aafbSBarry Smith #else 271d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 272d382aafbSBarry Smith #endif 273d382aafbSBarry Smith 274d382aafbSBarry Smith 275d382aafbSBarry Smith /* 276d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 277d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 278d382aafbSBarry Smith */ 279*014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 280d382aafbSBarry Smith 281d382aafbSBarry Smith /* 282d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 283d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 284d382aafbSBarry Smith */ 285*014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 286d382aafbSBarry Smith 287d382aafbSBarry Smith /*MC 288d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 289d382aafbSBarry Smith 290d382aafbSBarry Smith Synopsis: 291ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 292d382aafbSBarry Smith 293eca87e8dSBarry Smith Not Collective 294eca87e8dSBarry Smith 295d382aafbSBarry Smith Input Parameters: 296d382aafbSBarry Smith . cond - condition or expression 297d382aafbSBarry Smith 298d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 299d382aafbSBarry Smith branch is unlikely. 300d382aafbSBarry Smith 301d382aafbSBarry Smith Level: advanced 302d382aafbSBarry Smith 303d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 304d382aafbSBarry Smith M*/ 305d382aafbSBarry Smith 306d382aafbSBarry Smith /*MC 307d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 308d382aafbSBarry Smith 309d382aafbSBarry Smith Synopsis: 310ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 311d382aafbSBarry Smith 312eca87e8dSBarry Smith Not Collective 313eca87e8dSBarry Smith 314d382aafbSBarry Smith Input Parameters: 315d382aafbSBarry Smith . cond - condition or expression 316d382aafbSBarry Smith 317d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 318d382aafbSBarry Smith branch is likely. 319d382aafbSBarry Smith 320d382aafbSBarry Smith Level: advanced 321d382aafbSBarry Smith 322d382aafbSBarry Smith .seealso: PetscUnlikely() 323d382aafbSBarry Smith M*/ 324d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 325d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 326d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 327d382aafbSBarry Smith #else 328cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 329cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 330d382aafbSBarry Smith #endif 331d382aafbSBarry Smith 332d382aafbSBarry Smith /* 333d382aafbSBarry Smith Defines some elementary mathematics functions and constants. 334d382aafbSBarry Smith */ 335d382aafbSBarry Smith #include "petscmath.h" 336d382aafbSBarry Smith 337d382aafbSBarry Smith /* 338d382aafbSBarry Smith Declare extern C stuff after including external header files 339d382aafbSBarry Smith */ 340d382aafbSBarry Smith 341d382aafbSBarry Smith 342d382aafbSBarry Smith /* 343d382aafbSBarry Smith Basic PETSc constants 344d382aafbSBarry Smith */ 345d382aafbSBarry Smith 346d382aafbSBarry Smith /*E 347ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 348d382aafbSBarry Smith 349d382aafbSBarry Smith Level: beginner 350d382aafbSBarry Smith 351ace3abfcSBarry Smith Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 35234e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 35334e82e7dSBarry Smith 354d382aafbSBarry Smith E*/ 355ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 356*014dd563SJed Brown PETSC_EXTERN const char *PetscBools[]; 35770b3c8c7SBarry Smith 35870b3c8c7SBarry Smith /*E 35970b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 36070b3c8c7SBarry Smith 36170b3c8c7SBarry Smith Level: beginner 36270b3c8c7SBarry Smith 36370b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 36470b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 36570b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 36670b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 36770b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 36870b3c8c7SBarry Smith 36970b3c8c7SBarry Smith E*/ 37070b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 371*014dd563SJed Brown PETSC_EXTERN const char *PetscCopyModes[]; 372d382aafbSBarry Smith 373d382aafbSBarry Smith /*MC 374ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 375d382aafbSBarry Smith 376d382aafbSBarry Smith Level: beginner 377d382aafbSBarry Smith 378d382aafbSBarry Smith Note: Zero integer 379d382aafbSBarry Smith 380ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE 381d382aafbSBarry Smith M*/ 382d382aafbSBarry Smith 383d382aafbSBarry Smith /*MC 384ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 385d382aafbSBarry Smith 386d382aafbSBarry Smith Level: beginner 387d382aafbSBarry Smith 388d382aafbSBarry Smith Note: Nonzero integer 389d382aafbSBarry Smith 390ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE 391d382aafbSBarry Smith M*/ 392d382aafbSBarry Smith 393d382aafbSBarry Smith /*MC 394d382aafbSBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer 395d382aafbSBarry Smith 396d382aafbSBarry Smith Level: beginner 397d382aafbSBarry Smith 398d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 399d382aafbSBarry Smith some default 400d382aafbSBarry Smith 401d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 402503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 403d382aafbSBarry Smith 40434e82e7dSBarry Smith Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under 40534e82e7dSBarry Smith different versions of Unix. It is tricky to insure the correct include file is always included. 40634e82e7dSBarry Smith 407d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 408d382aafbSBarry Smith 409d382aafbSBarry Smith M*/ 410d382aafbSBarry Smith #define PETSC_NULL 0 411d382aafbSBarry Smith 412d382aafbSBarry Smith /*MC 413d382aafbSBarry Smith PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 414d382aafbSBarry Smith 415d382aafbSBarry Smith Level: beginner 416d382aafbSBarry Smith 417d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 418d382aafbSBarry Smith some default 419d382aafbSBarry Smith 420d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 421d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 422d382aafbSBarry Smith 423d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 424d382aafbSBarry Smith 425d382aafbSBarry Smith M*/ 426d382aafbSBarry Smith #define PETSC_IGNORE PETSC_NULL 427d382aafbSBarry Smith 428d382aafbSBarry Smith /*MC 429557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 430557d4da8SBarry Smith where you wish PETSc to use the default. 431557d4da8SBarry Smith 432557d4da8SBarry Smith Level: beginner 433557d4da8SBarry Smith 434557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 435557d4da8SBarry Smith 436557d4da8SBarry Smith M*/ 437557d4da8SBarry Smith #define PETSC_DECIDE -1 438557d4da8SBarry Smith 439557d4da8SBarry Smith /*MC 440d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 441d382aafbSBarry Smith where you wish PETSc to compute the required value. 442d382aafbSBarry Smith 443d382aafbSBarry Smith Level: beginner 444d382aafbSBarry Smith 445557d4da8SBarry Smith 446557d4da8SBarry Smith Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 447557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 448557d4da8SBarry Smith 449d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 450d382aafbSBarry Smith 451d382aafbSBarry Smith M*/ 452d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 453d382aafbSBarry Smith 454d382aafbSBarry Smith /*MC 455557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 456557d4da8SBarry Smith where you wish PETSc to use the default. 457557d4da8SBarry Smith 458557d4da8SBarry Smith Level: beginner 459557d4da8SBarry Smith 460557d4da8SBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 461557d4da8SBarry Smith 462557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 463557d4da8SBarry Smith 464557d4da8SBarry Smith M*/ 465557d4da8SBarry Smith #define PETSC_DEFAULT -2 466557d4da8SBarry Smith 467557d4da8SBarry Smith /*MC 468d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 469d382aafbSBarry Smith all the processs that PETSc knows about. 470d382aafbSBarry Smith 471d382aafbSBarry Smith Level: beginner 472d382aafbSBarry Smith 473d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 474d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 475d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 476d382aafbSBarry Smith PetscInitialize() 477d382aafbSBarry Smith 478d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 479d382aafbSBarry Smith 480d382aafbSBarry Smith M*/ 481*014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 482d382aafbSBarry Smith 483d382aafbSBarry Smith /*MC 484503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 485d382aafbSBarry Smith 486d382aafbSBarry Smith Level: beginner 487d382aafbSBarry Smith 488d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 489d382aafbSBarry Smith 490d382aafbSBarry Smith M*/ 491d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 492d382aafbSBarry Smith 493*014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 494*014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 495*014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize; 496d382aafbSBarry Smith 497*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 498*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 499*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 500d382aafbSBarry Smith 501d382aafbSBarry Smith /*MC 502d382aafbSBarry Smith PetscMalloc - Allocates memory 503d382aafbSBarry Smith 504eca87e8dSBarry Smith Synopsis: 505eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 506eca87e8dSBarry Smith 507eca87e8dSBarry Smith Not Collective 508eca87e8dSBarry Smith 509d382aafbSBarry Smith Input Parameter: 510d382aafbSBarry Smith . m - number of bytes to allocate 511d382aafbSBarry Smith 512d382aafbSBarry Smith Output Parameter: 513d382aafbSBarry Smith . result - memory allocated 514d382aafbSBarry Smith 515d382aafbSBarry Smith Level: beginner 516d382aafbSBarry Smith 517d382aafbSBarry Smith Notes: Memory is always allocated at least double aligned 518d382aafbSBarry Smith 519d382aafbSBarry Smith If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 520d382aafbSBarry Smith properly handle not freeing the null pointer. 521d382aafbSBarry Smith 522d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 523d382aafbSBarry Smith 524d382aafbSBarry Smith Concepts: memory allocation 525d382aafbSBarry Smith 526d382aafbSBarry Smith M*/ 5272714b66aSJed Brown #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 528d382aafbSBarry Smith 529d382aafbSBarry Smith /*MC 530503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 531d382aafbSBarry Smith 532d382aafbSBarry Smith Synopsis: 533d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 534d382aafbSBarry Smith 535eca87e8dSBarry Smith Not Collective 536eca87e8dSBarry Smith 537eca87e8dSBarry Smith Input Parameters: 538eca87e8dSBarry Smith . addr - address to align (any pointer type) 539eca87e8dSBarry Smith 540d382aafbSBarry Smith Level: developer 541d382aafbSBarry Smith 542d382aafbSBarry Smith .seealso: PetscMallocAlign() 543d382aafbSBarry Smith 544d382aafbSBarry Smith Concepts: memory allocation 545d382aafbSBarry Smith M*/ 546d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 547d382aafbSBarry Smith 548d382aafbSBarry Smith /*MC 549503cfb0cSBarry Smith PetscMalloc2 - Allocates 2 chunks of memory both aligned to PETSC_MEMALIGN 550d382aafbSBarry Smith 551eca87e8dSBarry Smith Synopsis: 552eca87e8dSBarry Smith PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 553eca87e8dSBarry Smith 554eca87e8dSBarry Smith Not Collective 555eca87e8dSBarry Smith 556d382aafbSBarry Smith Input Parameter: 557d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 558d382aafbSBarry Smith . t1 - type of first memory elements 559d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 560d382aafbSBarry Smith - t2 - type of second memory elements 561d382aafbSBarry Smith 562d382aafbSBarry Smith Output Parameter: 563d382aafbSBarry Smith + r1 - memory allocated in first chunk 564d382aafbSBarry Smith - r2 - memory allocated in second chunk 565d382aafbSBarry Smith 566d382aafbSBarry Smith Level: developer 567d382aafbSBarry Smith 568d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 569d382aafbSBarry Smith 570d382aafbSBarry Smith Concepts: memory allocation 571d382aafbSBarry Smith 572d382aafbSBarry Smith M*/ 573d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 574d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 575d382aafbSBarry Smith #else 5762981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 577d382aafbSBarry Smith #endif 578d382aafbSBarry Smith 579d382aafbSBarry Smith /*MC 580503cfb0cSBarry Smith PetscMalloc3 - Allocates 3 chunks of memory all aligned to PETSC_MEMALIGN 581d382aafbSBarry Smith 582eca87e8dSBarry Smith Synopsis: 583eca87e8dSBarry Smith PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 584eca87e8dSBarry Smith 585eca87e8dSBarry Smith Not Collective 586eca87e8dSBarry Smith 587d382aafbSBarry Smith Input Parameter: 588d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 589d382aafbSBarry Smith . t1 - type of first memory elements 590d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 591d382aafbSBarry Smith . t2 - type of second memory elements 592d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 593d382aafbSBarry Smith - t3 - type of third memory elements 594d382aafbSBarry Smith 595d382aafbSBarry Smith Output Parameter: 596d382aafbSBarry Smith + r1 - memory allocated in first chunk 597d382aafbSBarry Smith . r2 - memory allocated in second chunk 598d382aafbSBarry Smith - r3 - memory allocated in third chunk 599d382aafbSBarry Smith 600d382aafbSBarry Smith Level: developer 601d382aafbSBarry Smith 602d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 603d382aafbSBarry Smith 604d382aafbSBarry Smith Concepts: memory allocation 605d382aafbSBarry Smith 606d382aafbSBarry Smith M*/ 607d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 608d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 609d382aafbSBarry Smith #else 6103b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 611d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 612d382aafbSBarry Smith #endif 613d382aafbSBarry Smith 614d382aafbSBarry Smith /*MC 615503cfb0cSBarry Smith PetscMalloc4 - Allocates 4 chunks of memory all aligned to PETSC_MEMALIGN 616d382aafbSBarry Smith 617eca87e8dSBarry Smith Synopsis: 618eca87e8dSBarry Smith PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 619eca87e8dSBarry Smith 620eca87e8dSBarry Smith Not Collective 621eca87e8dSBarry Smith 622d382aafbSBarry Smith Input Parameter: 623d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 624d382aafbSBarry Smith . t1 - type of first memory elements 625d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 626d382aafbSBarry Smith . t2 - type of second memory elements 627d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 628d382aafbSBarry Smith . t3 - type of third memory elements 629d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 630d382aafbSBarry Smith - t4 - type of fourth memory elements 631d382aafbSBarry Smith 632d382aafbSBarry Smith Output Parameter: 633d382aafbSBarry Smith + r1 - memory allocated in first chunk 634d382aafbSBarry Smith . r2 - memory allocated in second chunk 635d382aafbSBarry Smith . r3 - memory allocated in third chunk 636d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 637d382aafbSBarry Smith 638d382aafbSBarry Smith Level: developer 639d382aafbSBarry Smith 640d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 641d382aafbSBarry Smith 642d382aafbSBarry Smith Concepts: memory allocation 643d382aafbSBarry Smith 644d382aafbSBarry Smith M*/ 645d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 646d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 647d382aafbSBarry Smith #else 648d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 6493b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 650d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 651d382aafbSBarry Smith #endif 652d382aafbSBarry Smith 653d382aafbSBarry Smith /*MC 654503cfb0cSBarry Smith PetscMalloc5 - Allocates 5 chunks of memory all aligned to PETSC_MEMALIGN 655d382aafbSBarry Smith 656eca87e8dSBarry Smith Synopsis: 657eca87e8dSBarry Smith PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 658eca87e8dSBarry Smith 659eca87e8dSBarry Smith Not Collective 660eca87e8dSBarry Smith 661d382aafbSBarry Smith Input Parameter: 662d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 663d382aafbSBarry Smith . t1 - type of first memory elements 664d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 665d382aafbSBarry Smith . t2 - type of second memory elements 666d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 667d382aafbSBarry Smith . t3 - type of third memory elements 668d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 669d382aafbSBarry Smith . t4 - type of fourth memory elements 670d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 671d382aafbSBarry Smith - t5 - type of fifth memory elements 672d382aafbSBarry Smith 673d382aafbSBarry Smith Output Parameter: 674d382aafbSBarry Smith + r1 - memory allocated in first chunk 675d382aafbSBarry Smith . r2 - memory allocated in second chunk 676d382aafbSBarry Smith . r3 - memory allocated in third chunk 677d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 678d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 679d382aafbSBarry Smith 680d382aafbSBarry Smith Level: developer 681d382aafbSBarry Smith 682d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 683d382aafbSBarry Smith 684d382aafbSBarry Smith Concepts: memory allocation 685d382aafbSBarry Smith 686d382aafbSBarry Smith M*/ 687d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 688d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 689d382aafbSBarry Smith #else 690d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 6913b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 692d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 693d382aafbSBarry Smith #endif 694d382aafbSBarry Smith 695d382aafbSBarry Smith 696d382aafbSBarry Smith /*MC 697503cfb0cSBarry Smith PetscMalloc6 - Allocates 6 chunks of memory all aligned to PETSC_MEMALIGN 698d382aafbSBarry Smith 699eca87e8dSBarry Smith Synopsis: 700eca87e8dSBarry Smith PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 701eca87e8dSBarry Smith 702eca87e8dSBarry Smith Not Collective 703eca87e8dSBarry Smith 704d382aafbSBarry Smith Input Parameter: 705d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 706d382aafbSBarry Smith . t1 - type of first memory elements 707d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 708d382aafbSBarry Smith . t2 - type of second memory elements 709d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 710d382aafbSBarry Smith . t3 - type of third memory elements 711d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 712d382aafbSBarry Smith . t4 - type of fourth memory elements 713d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 714d382aafbSBarry Smith . t5 - type of fifth memory elements 715d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 716d382aafbSBarry Smith - t6 - type of sixth memory elements 717d382aafbSBarry Smith 718d382aafbSBarry Smith Output Parameter: 719d382aafbSBarry Smith + r1 - memory allocated in first chunk 720d382aafbSBarry Smith . r2 - memory allocated in second chunk 721d382aafbSBarry Smith . r3 - memory allocated in third chunk 722d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 723d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 724d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 725d382aafbSBarry Smith 726d382aafbSBarry Smith Level: developer 727d382aafbSBarry Smith 728d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 729d382aafbSBarry Smith 730d382aafbSBarry Smith Concepts: memory allocation 731d382aafbSBarry Smith 732d382aafbSBarry Smith M*/ 733d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 734d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 735d382aafbSBarry Smith #else 736d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 7373b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 738d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 739d382aafbSBarry Smith #endif 740d382aafbSBarry Smith 741d382aafbSBarry Smith /*MC 742503cfb0cSBarry Smith PetscMalloc7 - Allocates 7 chunks of memory all aligned to PETSC_MEMALIGN 743d382aafbSBarry Smith 744eca87e8dSBarry Smith Synopsis: 745eca87e8dSBarry Smith PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 746eca87e8dSBarry Smith 747eca87e8dSBarry Smith Not Collective 748eca87e8dSBarry Smith 749d382aafbSBarry Smith Input Parameter: 750d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 751d382aafbSBarry Smith . t1 - type of first memory elements 752d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 753d382aafbSBarry Smith . t2 - type of second memory elements 754d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 755d382aafbSBarry Smith . t3 - type of third memory elements 756d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 757d382aafbSBarry Smith . t4 - type of fourth memory elements 758d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 759d382aafbSBarry Smith . t5 - type of fifth memory elements 760d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 761d382aafbSBarry Smith . t6 - type of sixth memory elements 762d382aafbSBarry Smith . m7 - number of elements to allocate in 7th chunk (may be zero) 763d382aafbSBarry Smith - t7 - type of sixth memory elements 764d382aafbSBarry Smith 765d382aafbSBarry Smith Output Parameter: 766d382aafbSBarry Smith + r1 - memory allocated in first chunk 767d382aafbSBarry Smith . r2 - memory allocated in second chunk 768d382aafbSBarry Smith . r3 - memory allocated in third chunk 769d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 770d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 771d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 772eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 773d382aafbSBarry Smith 774d382aafbSBarry Smith Level: developer 775d382aafbSBarry Smith 776d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 777d382aafbSBarry Smith 778d382aafbSBarry Smith Concepts: memory allocation 779d382aafbSBarry Smith 780d382aafbSBarry Smith M*/ 781d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 782d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 783d382aafbSBarry Smith #else 784d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 7853b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 786d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 787d382aafbSBarry Smith #endif 788d382aafbSBarry Smith 789d382aafbSBarry Smith /*MC 790503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 791d382aafbSBarry Smith 792eca87e8dSBarry Smith Synopsis: 793eca87e8dSBarry Smith PetscErrorCode PetscNew(struct type,((type *))result) 794eca87e8dSBarry Smith 795eca87e8dSBarry Smith Not Collective 796eca87e8dSBarry Smith 797d382aafbSBarry Smith Input Parameter: 798d382aafbSBarry Smith . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 799d382aafbSBarry Smith 800d382aafbSBarry Smith Output Parameter: 801d382aafbSBarry Smith . result - memory allocated 802d382aafbSBarry Smith 803d382aafbSBarry Smith Level: beginner 804d382aafbSBarry Smith 805ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog() 806d382aafbSBarry Smith 807d382aafbSBarry Smith Concepts: memory allocation 808d382aafbSBarry Smith 809d382aafbSBarry Smith M*/ 810d382aafbSBarry Smith #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 811ad0619ddSBarry Smith 812ad0619ddSBarry Smith /*MC 813ad0619ddSBarry Smith PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 814ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 815ad0619ddSBarry Smith 816ad0619ddSBarry Smith Synopsis: 817ad0619ddSBarry Smith PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result) 818ad0619ddSBarry Smith 819ad0619ddSBarry Smith Not Collective 820ad0619ddSBarry Smith 821ad0619ddSBarry Smith Input Parameter: 822ad0619ddSBarry Smith + obj - object memory is logged to 823ad0619ddSBarry Smith - type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 824ad0619ddSBarry Smith 825ad0619ddSBarry Smith Output Parameter: 826ad0619ddSBarry Smith . result - memory allocated 827ad0619ddSBarry Smith 828ad0619ddSBarry Smith Level: developer 829ad0619ddSBarry Smith 830ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory() 831ad0619ddSBarry Smith 832ad0619ddSBarry Smith Concepts: memory allocation 833ad0619ddSBarry Smith 834ad0619ddSBarry Smith M*/ 835d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 836d382aafbSBarry Smith 837d382aafbSBarry Smith /*MC 838d382aafbSBarry Smith PetscFree - Frees memory 839d382aafbSBarry Smith 840eca87e8dSBarry Smith Synopsis: 841eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 842eca87e8dSBarry Smith 843eca87e8dSBarry Smith Not Collective 844eca87e8dSBarry Smith 845d382aafbSBarry Smith Input Parameter: 846d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 847d382aafbSBarry Smith 848d382aafbSBarry Smith Level: beginner 849d382aafbSBarry Smith 850d382aafbSBarry Smith Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 851d382aafbSBarry Smith 852d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 853d382aafbSBarry Smith 854d382aafbSBarry Smith Concepts: memory allocation 855d382aafbSBarry Smith 856d382aafbSBarry Smith M*/ 85712537b14SJed Brown #define PetscFree(a) ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0))) 858d382aafbSBarry Smith 859d382aafbSBarry Smith /*MC 860d382aafbSBarry Smith PetscFreeVoid - Frees memory 861d382aafbSBarry Smith 862d382aafbSBarry Smith Synopsis: 863d382aafbSBarry Smith void PetscFreeVoid(void *memory) 864d382aafbSBarry Smith 865eca87e8dSBarry Smith Not Collective 866eca87e8dSBarry Smith 867eca87e8dSBarry Smith Input Parameter: 868eca87e8dSBarry Smith . memory - memory to free 869eca87e8dSBarry Smith 870d382aafbSBarry Smith Level: beginner 871d382aafbSBarry Smith 872d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 873d382aafbSBarry Smith 874d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 875d382aafbSBarry Smith 876d382aafbSBarry Smith Concepts: memory allocation 877d382aafbSBarry Smith 878d382aafbSBarry Smith M*/ 8792714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0) 880d382aafbSBarry Smith 881d382aafbSBarry Smith 882d382aafbSBarry Smith /*MC 883d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 884d382aafbSBarry Smith 885eca87e8dSBarry Smith Synopsis: 886eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 887eca87e8dSBarry Smith 888eca87e8dSBarry Smith Not Collective 889eca87e8dSBarry Smith 890d382aafbSBarry Smith Input Parameter: 891d382aafbSBarry Smith + memory1 - memory to free 892d382aafbSBarry Smith - memory2 - 2nd memory to free 893d382aafbSBarry Smith 894d382aafbSBarry Smith Level: developer 895d382aafbSBarry Smith 896d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 897d382aafbSBarry Smith 898d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 899d382aafbSBarry Smith 900d382aafbSBarry Smith Concepts: memory allocation 901d382aafbSBarry Smith 902d382aafbSBarry Smith M*/ 903d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 904d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 905d382aafbSBarry Smith #else 90681dabb53SJed Brown #define PetscFree2(m1,m2) ((m2)=0, PetscFree(m1)) 907d382aafbSBarry Smith #endif 908d382aafbSBarry Smith 909d382aafbSBarry Smith /*MC 910d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 911d382aafbSBarry Smith 912eca87e8dSBarry Smith Synopsis: 913eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 914eca87e8dSBarry Smith 915eca87e8dSBarry Smith Not Collective 916eca87e8dSBarry Smith 917d382aafbSBarry Smith Input Parameter: 918d382aafbSBarry Smith + memory1 - memory to free 919d382aafbSBarry Smith . memory2 - 2nd memory to free 920d382aafbSBarry Smith - memory3 - 3rd memory to free 921d382aafbSBarry Smith 922d382aafbSBarry Smith Level: developer 923d382aafbSBarry Smith 924d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 925d382aafbSBarry Smith 926d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 927d382aafbSBarry Smith 928d382aafbSBarry Smith Concepts: memory allocation 929d382aafbSBarry Smith 930d382aafbSBarry Smith M*/ 931d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 932d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 933d382aafbSBarry Smith #else 93481dabb53SJed Brown #define PetscFree3(m1,m2,m3) ((m3)=0,(m2)=0,PetscFree(m1)) 935d382aafbSBarry Smith #endif 936d382aafbSBarry Smith 937d382aafbSBarry Smith /*MC 938d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 939d382aafbSBarry Smith 940eca87e8dSBarry Smith Synopsis: 941eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 942eca87e8dSBarry Smith 943eca87e8dSBarry Smith Not Collective 944eca87e8dSBarry Smith 945d382aafbSBarry Smith Input Parameter: 946d382aafbSBarry Smith + m1 - memory to free 947d382aafbSBarry Smith . m2 - 2nd memory to free 948d382aafbSBarry Smith . m3 - 3rd memory to free 949d382aafbSBarry Smith - m4 - 4th memory to free 950d382aafbSBarry Smith 951d382aafbSBarry Smith Level: developer 952d382aafbSBarry Smith 953d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 954d382aafbSBarry Smith 955d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 956d382aafbSBarry Smith 957d382aafbSBarry Smith Concepts: memory allocation 958d382aafbSBarry Smith 959d382aafbSBarry Smith M*/ 960d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 961d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 962d382aafbSBarry Smith #else 96381dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4) ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 964d382aafbSBarry Smith #endif 965d382aafbSBarry Smith 966d382aafbSBarry Smith /*MC 967d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 968d382aafbSBarry Smith 969eca87e8dSBarry Smith Synopsis: 970eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 971eca87e8dSBarry Smith 972eca87e8dSBarry Smith Not Collective 973eca87e8dSBarry Smith 974d382aafbSBarry Smith Input Parameter: 975d382aafbSBarry Smith + m1 - memory to free 976d382aafbSBarry Smith . m2 - 2nd memory to free 977d382aafbSBarry Smith . m3 - 3rd memory to free 978d382aafbSBarry Smith . m4 - 4th memory to free 979d382aafbSBarry Smith - m5 - 5th memory to free 980d382aafbSBarry Smith 981d382aafbSBarry Smith Level: developer 982d382aafbSBarry Smith 983d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 984d382aafbSBarry Smith 985d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 986d382aafbSBarry Smith 987d382aafbSBarry Smith Concepts: memory allocation 988d382aafbSBarry Smith 989d382aafbSBarry Smith M*/ 990d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 991d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 992d382aafbSBarry Smith #else 99381dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 994d382aafbSBarry Smith #endif 995d382aafbSBarry Smith 996d382aafbSBarry Smith 997d382aafbSBarry Smith /*MC 998d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 999d382aafbSBarry Smith 1000eca87e8dSBarry Smith Synopsis: 1001eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1002eca87e8dSBarry Smith 1003eca87e8dSBarry Smith Not Collective 1004eca87e8dSBarry Smith 1005d382aafbSBarry Smith Input Parameter: 1006d382aafbSBarry Smith + m1 - memory to free 1007d382aafbSBarry Smith . m2 - 2nd memory to free 1008d382aafbSBarry Smith . m3 - 3rd memory to free 1009d382aafbSBarry Smith . m4 - 4th memory to free 1010d382aafbSBarry Smith . m5 - 5th memory to free 1011d382aafbSBarry Smith - m6 - 6th memory to free 1012d382aafbSBarry Smith 1013d382aafbSBarry Smith 1014d382aafbSBarry Smith Level: developer 1015d382aafbSBarry Smith 1016d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1017d382aafbSBarry Smith 1018d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1019d382aafbSBarry Smith 1020d382aafbSBarry Smith Concepts: memory allocation 1021d382aafbSBarry Smith 1022d382aafbSBarry Smith M*/ 1023d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1024d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1025d382aafbSBarry Smith #else 102681dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1027d382aafbSBarry Smith #endif 1028d382aafbSBarry Smith 1029d382aafbSBarry Smith /*MC 1030d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1031d382aafbSBarry Smith 1032eca87e8dSBarry Smith Synopsis: 1033eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1034eca87e8dSBarry Smith 1035eca87e8dSBarry Smith Not Collective 1036eca87e8dSBarry Smith 1037d382aafbSBarry Smith Input Parameter: 1038d382aafbSBarry Smith + m1 - memory to free 1039d382aafbSBarry Smith . m2 - 2nd memory to free 1040d382aafbSBarry Smith . m3 - 3rd memory to free 1041d382aafbSBarry Smith . m4 - 4th memory to free 1042d382aafbSBarry Smith . m5 - 5th memory to free 1043d382aafbSBarry Smith . m6 - 6th memory to free 1044d382aafbSBarry Smith - m7 - 7th memory to free 1045d382aafbSBarry Smith 1046d382aafbSBarry Smith 1047d382aafbSBarry Smith Level: developer 1048d382aafbSBarry Smith 1049d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1050d382aafbSBarry Smith 1051d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1052d382aafbSBarry Smith PetscMalloc7() 1053d382aafbSBarry Smith 1054d382aafbSBarry Smith Concepts: memory allocation 1055d382aafbSBarry Smith 1056d382aafbSBarry Smith M*/ 1057d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1058d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1059d382aafbSBarry Smith #else 106081dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1061d382aafbSBarry Smith #endif 1062d382aafbSBarry Smith 1063*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 1064*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 1065*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 1066*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1067d382aafbSBarry Smith 1068d382aafbSBarry Smith /* 1069a5057860SBarry Smith PetscLogDouble variables are used to contain double precision numbers 1070a5057860SBarry Smith that are not used in the numerical computations, but rather in logging, 1071a5057860SBarry Smith timing etc. 1072a5057860SBarry Smith */ 1073a5057860SBarry Smith typedef double PetscLogDouble; 1074a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 1075a5057860SBarry Smith 1076a5057860SBarry Smith /* 107766d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1078d382aafbSBarry Smith */ 1079*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1080*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1081*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1082*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1083*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 1084*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]); 1085*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1086*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1087d382aafbSBarry Smith 1088d382aafbSBarry Smith /*E 1089d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1090d382aafbSBarry Smith 1091d382aafbSBarry Smith Level: beginner 1092d382aafbSBarry Smith 1093d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1094d382aafbSBarry Smith 1095d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1096d382aafbSBarry Smith PetscDataTypeGetSize() 1097d382aafbSBarry Smith 1098d382aafbSBarry Smith E*/ 1099d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 110059a34000SBarry Smith PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10} PetscDataType; 1101*014dd563SJed Brown PETSC_EXTERN const char *PetscDataTypes[]; 1102d382aafbSBarry Smith 1103d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1104d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1105d382aafbSBarry Smith #else 1106ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1107d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 110859a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 110959a34000SBarry Smith #define PETSC_SCALAR PETSC___FLOAT128 1110d382aafbSBarry Smith #else 1111d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1112d382aafbSBarry Smith #endif 1113d382aafbSBarry Smith #endif 1114ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1115d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 111659a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 111759a34000SBarry Smith #define PETSC_REAL PETSC___FLOAT128 1118d382aafbSBarry Smith #else 1119d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1120d382aafbSBarry Smith #endif 1121d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1122d382aafbSBarry Smith 1123*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1124*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1125*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 1126d382aafbSBarry Smith 1127d382aafbSBarry Smith /* 1128d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1129d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1130d382aafbSBarry Smith functionality and/or error checking. 1131d382aafbSBarry Smith */ 1132*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1133*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1134*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1135*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1136*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],int*,char ***); 1137*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1138*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1139*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1140*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1141*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1142*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1143*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1144*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t); 1145*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1146*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1147*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 1148*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1149*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1150*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1151*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 1152*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1153*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 1154*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1155d382aafbSBarry Smith 1156d382aafbSBarry Smith /*S 1157d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1158d382aafbSBarry Smith 1159d382aafbSBarry Smith Level: intermediate 1160d382aafbSBarry Smith 1161d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1162d382aafbSBarry Smith S*/ 1163d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1164d382aafbSBarry Smith 1165*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1166*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1167*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1168d382aafbSBarry Smith 1169d382aafbSBarry Smith /* 1170d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1171d382aafbSBarry Smith */ 1172*014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op; 11732414b3c7SJed Brown #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) 1174*014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 11752414b3c7SJed Brown #else 11762414b3c7SJed Brown #define MPIU_SUM MPI_SUM 11772414b3c7SJed Brown #endif 11782414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128) 1179*014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1180*014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1181d9822059SBarry Smith #else 1182d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1183d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1184d9822059SBarry Smith #endif 1185*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1186d382aafbSBarry Smith 1187*014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1188*014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1189eb3f98d2SBarry Smith 1190d382aafbSBarry Smith /*S 1191d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1192d382aafbSBarry Smith 1193d382aafbSBarry Smith Level: beginner 1194d382aafbSBarry Smith 11952981ebdbSBarry Smith Note: This is the base class from which all PETSc objects are derived from. 1196d382aafbSBarry Smith 11971890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1198d382aafbSBarry Smith S*/ 1199d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1200d382aafbSBarry Smith 1201d382aafbSBarry Smith /*S 1202d382aafbSBarry Smith PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1203d382aafbSBarry Smith by string name 1204d382aafbSBarry Smith 1205d382aafbSBarry Smith Level: advanced 1206d382aafbSBarry Smith 12072981ebdbSBarry Smith .seealso: PetscFListAdd(), PetscFListDestroy(), PetscOpFlist 1208d382aafbSBarry Smith S*/ 1209d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList; 1210d382aafbSBarry Smith 1211e4d1774bSDmitry Karpeev /*S 1212e4d1774bSDmitry Karpeev PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries, 1213e4d1774bSDmitry Karpeev accessed by string op name together with string argument types. 1214e4d1774bSDmitry Karpeev 1215e4d1774bSDmitry Karpeev Level: advanced 1216e4d1774bSDmitry Karpeev 12172981ebdbSBarry Smith .seealso: PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy() 1218e4d1774bSDmitry Karpeev S*/ 1219e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList; 1220e4d1774bSDmitry Karpeev 1221d382aafbSBarry Smith /*E 1222d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1223d382aafbSBarry Smith 1224d382aafbSBarry Smith Level: beginner 1225d382aafbSBarry Smith 1226d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1227d382aafbSBarry Smith 1228d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1229d382aafbSBarry Smith 1230d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1231d382aafbSBarry Smith 1232d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1233d382aafbSBarry Smith 1234d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1237d382aafbSBarry Smith E*/ 1238d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1239d382aafbSBarry Smith 1240d382aafbSBarry Smith #include "petscviewer.h" 1241d382aafbSBarry Smith #include "petscoptions.h" 1242d382aafbSBarry Smith 12430700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1244*014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1245*014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1246*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1247d382aafbSBarry Smith 1248d382aafbSBarry Smith /* 1249d382aafbSBarry Smith Routines that get memory usage information from the OS 1250d382aafbSBarry Smith */ 1251*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1252*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1253*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1254*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1255d382aafbSBarry Smith 1256*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1257*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*); 1258*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*); 1259*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1260d382aafbSBarry Smith 1261d382aafbSBarry Smith /* 1262d382aafbSBarry Smith Initialization of PETSc 1263d382aafbSBarry Smith */ 1264*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1265*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1266*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1267*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1268*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1269*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1270*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1271*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1272*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1273*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1274d382aafbSBarry Smith 1275*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1276*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]); 1277d382aafbSBarry Smith 1278*014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD; 1279*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 1280*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt); 1281*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void); 1282*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 1283*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 1284*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*); 1285*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**); 1286d382aafbSBarry Smith 1287*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1288*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1289*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1290*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1291d382aafbSBarry Smith 1292d382aafbSBarry Smith /* 1293d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12942981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1295d382aafbSBarry Smith */ 1296d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void); 1297d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void); 1298d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1299d382aafbSBarry Smith 1300d382aafbSBarry Smith /* 1301d382aafbSBarry Smith PetscTryMethod - Queries an object for a method, if it exists then calls it. 1302d382aafbSBarry Smith These are intended to be used only inside PETSc functions. 1303503cfb0cSBarry Smith 1304503cfb0cSBarry Smith Level: developer 1305503cfb0cSBarry Smith 1306503cfb0cSBarry Smith .seealso: PetscUseMethod() 1307d382aafbSBarry Smith */ 1308d382aafbSBarry Smith #define PetscTryMethod(obj,A,B,C) \ 1309d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1310d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1311d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1312d382aafbSBarry Smith } 1313503cfb0cSBarry Smith 1314503cfb0cSBarry Smith /* 1315503cfb0cSBarry Smith PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error. 1316503cfb0cSBarry Smith These are intended to be used only inside PETSc functions. 1317503cfb0cSBarry Smith 1318503cfb0cSBarry Smith Level: developer 1319503cfb0cSBarry Smith 1320503cfb0cSBarry Smith .seealso: PetscTryMethod() 1321503cfb0cSBarry Smith */ 1322d382aafbSBarry Smith #define PetscUseMethod(obj,A,B,C) \ 1323d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1324d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1325d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1326703c66c1SJed Brown else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \ 1327d382aafbSBarry Smith } 1328503cfb0cSBarry Smith 1329d382aafbSBarry Smith /* 1330d382aafbSBarry Smith Functions that can act on any PETSc object. 1331d382aafbSBarry Smith */ 1332*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1333*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1334*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1335*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1336*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1337*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision); 1338*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1339*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1340*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1341*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]); 1342*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1343*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1344*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1345*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1346*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1347*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1348*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1349*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 1350*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1351*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1352*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1353*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 1354*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1355*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 1356*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1357*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*); 1358*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject); 1359*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject); 1360*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 1361d382aafbSBarry Smith 1362d382aafbSBarry Smith /*MC 1363d382aafbSBarry Smith PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1364d382aafbSBarry Smith 1365eca87e8dSBarry Smith Synopsis: 1366eca87e8dSBarry Smith PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1367eca87e8dSBarry Smith 1368ad4df100SBarry Smith Logically Collective on PetscObject 1369d382aafbSBarry Smith 1370d382aafbSBarry Smith Input Parameters: 1371d382aafbSBarry Smith + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1372d382aafbSBarry Smith PetscObjectCompose((PetscObject)mat,...); 1373d382aafbSBarry Smith . name - name associated with the child function 1374d382aafbSBarry Smith . fname - name of the function 1375d382aafbSBarry Smith - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1376d382aafbSBarry Smith 1377d382aafbSBarry Smith Level: advanced 1378d382aafbSBarry Smith 1379d382aafbSBarry Smith 1380d382aafbSBarry Smith Notes: 1381d382aafbSBarry Smith To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1382d382aafbSBarry Smith 1383d382aafbSBarry Smith PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1384d382aafbSBarry Smith Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1385d382aafbSBarry Smith 1386d382aafbSBarry Smith The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 138720de1f94SBarry Smith work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading) 1388d382aafbSBarry Smith enabled. 1389d382aafbSBarry Smith 1390d382aafbSBarry Smith Concepts: objects^composing functions 1391d382aafbSBarry Smith Concepts: composing functions 1392d382aafbSBarry Smith Concepts: functions^querying 1393d382aafbSBarry Smith Concepts: objects^querying 1394d382aafbSBarry Smith Concepts: querying objects 1395d382aafbSBarry Smith 1396d382aafbSBarry Smith .seealso: PetscObjectQueryFunction() 1397d382aafbSBarry Smith M*/ 1398d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1399d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1400d382aafbSBarry Smith #else 1401d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1402d382aafbSBarry Smith #endif 1403d382aafbSBarry Smith 1404*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 1405*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1406*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1407*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1408*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1409*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAMSPublish(PetscObject); 1410*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectUnPublish(PetscObject); 1411*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1412*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1413*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1414*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1415*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 1416*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1417*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1418*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1419d382aafbSBarry Smith 1420d382aafbSBarry Smith /* 1421d382aafbSBarry Smith Defines PETSc error handling. 1422d382aafbSBarry Smith */ 1423d382aafbSBarry Smith #include "petscerror.h" 1424d382aafbSBarry Smith 1425d382aafbSBarry Smith /*S 1426503cfb0cSBarry Smith PetscOList - Linked list of PETSc objects, each accessable by string name 1427d382aafbSBarry Smith 14281d0fab5eSBarry Smith Level: developer 1429d382aafbSBarry Smith 14301d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 14311d0fab5eSBarry Smith 14322981ebdbSBarry Smith .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList 1433d382aafbSBarry Smith S*/ 1434d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList; 1435d382aafbSBarry Smith 1436*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDestroy(PetscOList*); 1437*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListFind(PetscOList,const char[],PetscObject*); 1438*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*); 1439*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListAdd(PetscOList *,const char[],PetscObject); 1440*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListRemoveReference(PetscOList *,const char[]); 1441*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDuplicate(PetscOList,PetscOList *); 1442d382aafbSBarry Smith 1443d382aafbSBarry Smith /* 1444503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1445d382aafbSBarry Smith link libraries that will be loaded as needed. 1446d382aafbSBarry Smith */ 1447*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 1448*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDestroy(PetscFList*); 1449*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void)); 1450*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1451d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1452d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1453d382aafbSBarry Smith #else 1454d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1455d382aafbSBarry Smith #endif 1456*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDuplicate(PetscFList,PetscFList *); 1457*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListView(PetscFList,PetscViewer); 1458*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListConcat(const char [],const char [],char []); 1459*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListGet(PetscFList,char ***,int*); 1460d382aafbSBarry Smith 146148703020SDmitry Karpeev /* 146248703020SDmitry Karpeev Multiple dispatch operation function lists. Lists of names of routines with corresponding 146348703020SDmitry Karpeev argument type names with function pointers or in dynamic link libraries that will be loaded 146448703020SDmitry Karpeev as needed. Search on the op name and argument type names. 146548703020SDmitry Karpeev */ 1466*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]); 1467*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListDestroy(PetscOpFList*); 1468*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]); 1469*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListView(PetscOpFList,PetscViewer); 14702981ebdbSBarry Smith 1471d382aafbSBarry Smith /*S 1472d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1473d382aafbSBarry Smith 1474d382aafbSBarry Smith Level: advanced 1475d382aafbSBarry Smith 147620de1f94SBarry Smith --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries 1477d382aafbSBarry Smith 1478d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1479d382aafbSBarry Smith S*/ 1480d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1481*014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1482*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1483*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1484*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1485*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1486*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1487*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1488*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1489d382aafbSBarry Smith 1490d382aafbSBarry Smith /* 1491a5a3d712SDmitry Karpeev PetscShell support. Needs to be better documented. 149205846914SDmitry Karpeev Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc. 149305846914SDmitry Karpeev */ 1494a5a3d712SDmitry Karpeev #include "petscshell.h" 149505846914SDmitry Karpeev 149605846914SDmitry Karpeev /* 1497d382aafbSBarry Smith Useful utility routines 1498d382aafbSBarry Smith */ 1499*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1500*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1501*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1502*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1503*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1504*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1505d382aafbSBarry Smith 1506503cfb0cSBarry Smith /* 1507ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1508503cfb0cSBarry Smith 1509503cfb0cSBarry Smith Notes: This is useful in cases like 1510503cfb0cSBarry Smith $ int *a; 1511ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 1512ace3abfcSBarry Smith where !a does not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1513503cfb0cSBarry Smith */ 1514d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1515503cfb0cSBarry Smith 1516d382aafbSBarry Smith /* 1517d382aafbSBarry Smith Defines basic graphics available from PETSc. 1518d382aafbSBarry Smith */ 1519d382aafbSBarry Smith #include "petscdraw.h" 1520d382aafbSBarry Smith 1521d382aafbSBarry Smith /* 1522d382aafbSBarry Smith Defines the base data structures for all PETSc objects 1523d382aafbSBarry Smith */ 1524b45d2f2cSJed Brown #include "petsc-private/petscimpl.h" 1525503cfb0cSBarry Smith 1526238ccf28SShri Abhyankar 1527d382aafbSBarry Smith /*MC 1528d382aafbSBarry Smith PetscErrorPrintf - Prints error messages. 1529d382aafbSBarry Smith 1530d382aafbSBarry Smith Synopsis: 1531d382aafbSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1532d382aafbSBarry Smith 1533eca87e8dSBarry Smith Not Collective 1534eca87e8dSBarry Smith 1535d382aafbSBarry Smith Input Parameters: 1536d382aafbSBarry Smith . format - the usual printf() format string 1537d382aafbSBarry Smith 1538d382aafbSBarry Smith Options Database Keys: 1539d382aafbSBarry Smith + -error_output_stdout - cause error messages to be printed to stdout instead of the 1540d382aafbSBarry Smith (default) stderr 1541d382aafbSBarry Smith - -error_output_none to turn off all printing of error messages (does not change the way the 1542d382aafbSBarry Smith error is handled.) 1543d382aafbSBarry Smith 1544d382aafbSBarry Smith Notes: Use 1545d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1546d382aafbSBarry Smith $ error is handled.) and 1547d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1548c9a19010SBarry Smith $ of you can use your own function 1549d382aafbSBarry Smith 1550d382aafbSBarry Smith Use 1551d382aafbSBarry Smith PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1552d382aafbSBarry Smith PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1553d382aafbSBarry Smith 1554d382aafbSBarry Smith Use 1555d382aafbSBarry Smith PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1556d382aafbSBarry Smith 1557d382aafbSBarry Smith Level: developer 1558d382aafbSBarry Smith 1559d382aafbSBarry Smith Fortran Note: 1560d382aafbSBarry Smith This routine is not supported in Fortran. 1561d382aafbSBarry Smith 1562d382aafbSBarry Smith Concepts: error messages^printing 1563d382aafbSBarry Smith Concepts: printing^error messages 1564d382aafbSBarry Smith 1565c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf() 1566d382aafbSBarry Smith M*/ 1567*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1568d382aafbSBarry Smith 1569d382aafbSBarry Smith /*MC 1570d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1571d382aafbSBarry Smith 1572d382aafbSBarry Smith Synopsis: 1573d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1574d382aafbSBarry Smith 1575eca87e8dSBarry Smith Not Collective 1576eca87e8dSBarry Smith 1577d382aafbSBarry Smith Input Parameters: 1578d382aafbSBarry Smith . format - the usual printf() format string 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith Level: developer 1581d382aafbSBarry Smith 1582d382aafbSBarry Smith Fortran Note: 1583d382aafbSBarry Smith This routine is not supported in Fortran. 1584d382aafbSBarry Smith 1585d382aafbSBarry Smith Concepts: help messages^printing 1586d382aafbSBarry Smith Concepts: printing^help messages 1587d382aafbSBarry Smith 1588d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1589d382aafbSBarry Smith M*/ 1590*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1591d382aafbSBarry Smith 1592fcfd50ebSBarry Smith /* 1593fcfd50ebSBarry Smith Defines PETSc profiling. 1594fcfd50ebSBarry Smith */ 1595fcfd50ebSBarry Smith #include "petsclog.h" 1596fcfd50ebSBarry Smith 1597fcfd50ebSBarry Smith /* 1598fcfd50ebSBarry Smith For locking, unlocking and destroying AMS memories associated with PETSc objects. ams.h is included in petscviewer.h 1599fcfd50ebSBarry Smith */ 1600fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS) 1601*014dd563SJed Brown PETSC_EXTERN PetscBool PetscAMSPublishAll; 1602fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem)) 1603fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem)) 1604fcfd50ebSBarry Smith #define PetscObjectDepublish(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1; 1605fcfd50ebSBarry Smith #else 1606fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj) 0 1607fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) 0 1608fcfd50ebSBarry Smith #define PetscObjectDepublish(obj) 0 1609fcfd50ebSBarry Smith #endif 1610fcfd50ebSBarry Smith 1611fcfd50ebSBarry Smith /* 1612fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1613fcfd50ebSBarry Smith */ 1614*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1615*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1616*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1617*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1618*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1619*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1620*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 1621fcfd50ebSBarry Smith 1622fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1623fcfd50ebSBarry Smith #include <stdarg.h> 1624*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 1625*014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 1626*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list); 1627fcfd50ebSBarry Smith 1628fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE) 1629*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list); 1630fcfd50ebSBarry Smith #endif 1631fcfd50ebSBarry Smith 1632*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1633*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1634*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1635d382aafbSBarry Smith 1636d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1637*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1638*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 1639d382aafbSBarry Smith #endif 1640d382aafbSBarry Smith 1641*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1642*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 1643*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm); 1644*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1645*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1646*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1647*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1648d382aafbSBarry Smith 1649*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1650d382aafbSBarry Smith 1651d382aafbSBarry Smith /*S 1652d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1653d382aafbSBarry Smith 1654d382aafbSBarry Smith Level: advanced 1655d382aafbSBarry Smith 1656d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1657d382aafbSBarry Smith S*/ 1658*014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1659d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 1660*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1661*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1662*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1663*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1664*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1665d382aafbSBarry Smith 1666d382aafbSBarry Smith /* 1667d382aafbSBarry Smith For use in debuggers 1668d382aafbSBarry Smith */ 1669*014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1670*014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1671*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1672*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1673*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1674d382aafbSBarry Smith 1675d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H) 1676d382aafbSBarry Smith #include <memory.h> 1677d382aafbSBarry Smith #endif 1678d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1679d382aafbSBarry Smith #include <stdlib.h> 1680d382aafbSBarry Smith #endif 1681d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H) 1682d382aafbSBarry Smith #include <strings.h> 1683d382aafbSBarry Smith #endif 1684d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H) 1685d382aafbSBarry Smith #include <string.h> 1686d382aafbSBarry Smith #endif 16876c7e564aSBarry Smith 16884a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1689d382aafbSBarry Smith #include <xmmintrin.h> 1690d382aafbSBarry Smith #endif 1691d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H) 1692d382aafbSBarry Smith #include <stdint.h> 1693d382aafbSBarry Smith #endif 1694d382aafbSBarry Smith 1695fcfd50ebSBarry Smith #undef __FUNCT__ 1696fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy" 1697d382aafbSBarry Smith /*@C 1698d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1699d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1700d382aafbSBarry Smith PetscMemmove() in that case. 1701d382aafbSBarry Smith 1702d382aafbSBarry Smith Not Collective 1703d382aafbSBarry Smith 1704d382aafbSBarry Smith Input Parameters: 1705d382aafbSBarry Smith + b - pointer to initial memory space 1706d382aafbSBarry Smith - n - length (in bytes) of space to copy 1707d382aafbSBarry Smith 1708d382aafbSBarry Smith Output Parameter: 1709d382aafbSBarry Smith . a - pointer to copy space 1710d382aafbSBarry Smith 1711d382aafbSBarry Smith Level: intermediate 1712d382aafbSBarry Smith 1713d382aafbSBarry Smith Compile Option: 1714d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1715d382aafbSBarry Smith for memory copies on double precision values. 1716d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1717d382aafbSBarry Smith for memory copies on double precision values. 1718d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1719d382aafbSBarry Smith for memory copies on double precision values. 1720d382aafbSBarry Smith 1721d382aafbSBarry Smith Note: 1722d382aafbSBarry Smith This routine is analogous to memcpy(). 1723d382aafbSBarry Smith 1724503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1725503cfb0cSBarry Smith 1726d382aafbSBarry Smith Concepts: memory^copying 1727d382aafbSBarry Smith Concepts: copying^memory 1728d382aafbSBarry Smith 1729d382aafbSBarry Smith .seealso: PetscMemmove() 1730d382aafbSBarry Smith 1731d382aafbSBarry Smith @*/ 17327087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1733d382aafbSBarry Smith { 1734d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1735d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1736d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1737a7e36092SMatthew G Knepley PetscFunctionBegin; 1738e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1739e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1740a7e36092SMatthew G Knepley #else 1741d382aafbSBarry Smith PetscFunctionBegin; 1742a7e36092SMatthew G Knepley #endif 1743d382aafbSBarry Smith if (a != b) { 1744d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1745e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1746d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1747d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1748d382aafbSBarry Smith #endif 1749d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1750d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1751d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1752d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1753d382aafbSBarry Smith PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1754d382aafbSBarry Smith BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1755d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1756d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1757d382aafbSBarry Smith #else 1758d382aafbSBarry Smith size_t i; 1759d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1760d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1761d382aafbSBarry Smith #endif 1762d382aafbSBarry Smith } else { 1763d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1764d382aafbSBarry Smith } 1765d382aafbSBarry Smith #else 1766d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1767d382aafbSBarry Smith #endif 1768d382aafbSBarry Smith } 1769d382aafbSBarry Smith PetscFunctionReturn(0); 1770d382aafbSBarry Smith } 1771d382aafbSBarry Smith 1772d382aafbSBarry Smith /*@C 1773d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1774d382aafbSBarry Smith 1775d382aafbSBarry Smith Not Collective 1776d382aafbSBarry Smith 1777d382aafbSBarry Smith Input Parameters: 1778d382aafbSBarry Smith + a - pointer to beginning memory location 1779d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1780d382aafbSBarry Smith 1781d382aafbSBarry Smith Level: intermediate 1782d382aafbSBarry Smith 1783d382aafbSBarry Smith Compile Option: 1784d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1785d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1786d382aafbSBarry Smith 1787503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1788503cfb0cSBarry Smith 1789d382aafbSBarry Smith Concepts: memory^zeroing 1790d382aafbSBarry Smith Concepts: zeroing^memory 1791d382aafbSBarry Smith 1792d382aafbSBarry Smith .seealso: PetscMemcpy() 1793d382aafbSBarry Smith @*/ 17947087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1795d382aafbSBarry Smith { 1796d382aafbSBarry Smith if (n > 0) { 1797d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1798e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1799d382aafbSBarry Smith #endif 1800d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1801d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1802d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1803d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1804d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1805d382aafbSBarry Smith } else { 1806d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1807d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1808d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1809d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1810d382aafbSBarry Smith } else { 1811d382aafbSBarry Smith #endif 1812d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1813d382aafbSBarry Smith bzero((char *)a,n); 1814d382aafbSBarry Smith #else 1815d382aafbSBarry Smith memset((char*)a,0,n); 1816d382aafbSBarry Smith #endif 1817d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1818d382aafbSBarry Smith } 1819d382aafbSBarry Smith #endif 1820d382aafbSBarry Smith } 1821d382aafbSBarry Smith return 0; 1822d382aafbSBarry Smith } 1823d382aafbSBarry Smith 1824d382aafbSBarry Smith /*MC 1825d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1826d382aafbSBarry Smith 1827eca87e8dSBarry Smith Synopsis: 1828eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1829eca87e8dSBarry Smith 1830d382aafbSBarry Smith Not Collective 1831d382aafbSBarry Smith 1832d382aafbSBarry Smith Input Parameters: 1833d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1834d382aafbSBarry Smith . n - number of elements to fetch 1835d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 183650d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1837d382aafbSBarry Smith 1838d382aafbSBarry Smith Level: developer 1839d382aafbSBarry Smith 1840d382aafbSBarry Smith Notes: 1841d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1842d382aafbSBarry Smith 184350d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 184450d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 184550d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 184663cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 184763cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 184863cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1849d382aafbSBarry Smith 1850d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1851d382aafbSBarry Smith address). 1852d382aafbSBarry Smith 1853d382aafbSBarry Smith Concepts: memory 1854d382aafbSBarry Smith M*/ 1855d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1856d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1857d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1858d382aafbSBarry Smith } while (0) 1859d382aafbSBarry Smith 1860d382aafbSBarry Smith /* 1861e3c5b3baSBarry Smith Allows accessing MATLAB Engine 1862d382aafbSBarry Smith */ 1863d382aafbSBarry Smith #include "petscmatlab.h" 1864d382aafbSBarry Smith 1865d382aafbSBarry Smith /* 1866d382aafbSBarry Smith Determine if some of the kernel computation routines use 1867d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1868d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1869d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1870e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1871d382aafbSBarry Smith */ 1872d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1873d382aafbSBarry Smith 1874d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1875d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1876d382aafbSBarry Smith #endif 1877d382aafbSBarry Smith 18785a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18795a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1880d382aafbSBarry Smith #endif 1881d382aafbSBarry Smith 1882d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1883d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1884d382aafbSBarry Smith #endif 1885d382aafbSBarry Smith 1886d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1887d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1888d382aafbSBarry Smith #endif 1889d382aafbSBarry Smith 1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1892d382aafbSBarry Smith #endif 1893d382aafbSBarry Smith 1894d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1895d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1896d382aafbSBarry Smith #endif 1897d382aafbSBarry Smith 1898d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1899d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1900d382aafbSBarry Smith #endif 1901d382aafbSBarry Smith 1902d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1903d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1904d382aafbSBarry Smith #endif 1905d382aafbSBarry Smith 1906d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1907d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1908d382aafbSBarry Smith #endif 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1911d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1912d382aafbSBarry Smith #endif 1913d382aafbSBarry Smith 1914d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1915d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1916d382aafbSBarry Smith #endif 1917d382aafbSBarry Smith 1918d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1919d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1920d382aafbSBarry Smith #endif 1921d382aafbSBarry Smith 1922d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1923d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1924d382aafbSBarry Smith #endif 1925d382aafbSBarry Smith 1926d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1927d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1928d382aafbSBarry Smith #endif 1929d382aafbSBarry Smith 1930d382aafbSBarry Smith #endif 1931d382aafbSBarry Smith 1932d382aafbSBarry Smith /* 1933d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1934d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1935d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1936d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1937d382aafbSBarry Smith ugly extern "C" {} wrappers. 1938d382aafbSBarry Smith */ 1939d382aafbSBarry Smith #if defined(__cplusplus) 1940*014dd563SJed Brown #define PETSC_EXTERN_C extern "C" PETSC_VISIBILITY_PUBLIC 1941d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1942d382aafbSBarry Smith #define EXTERN_C_END } 1943d382aafbSBarry Smith #else 1944*014dd563SJed Brown #define PETSC_EXTERN_C PETSC_EXTERN 1945d382aafbSBarry Smith #define EXTERN_C_BEGIN 1946d382aafbSBarry Smith #define EXTERN_C_END 1947d382aafbSBarry Smith #endif 1948d382aafbSBarry Smith 1949d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1950d382aafbSBarry Smith 1951d382aafbSBarry Smith /*MC 1952d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1953d382aafbSBarry Smith communication 1954d382aafbSBarry Smith 1955d382aafbSBarry Smith Level: beginner 1956d382aafbSBarry Smith 1957d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1958d382aafbSBarry Smith 1959d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1960d382aafbSBarry Smith M*/ 1961d382aafbSBarry Smith 1962d382aafbSBarry Smith /*MC 1963d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 1964d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 1965d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 1966d382aafbSBarry Smith 1967d382aafbSBarry Smith 1968d382aafbSBarry Smith Level: beginner 1969d382aafbSBarry Smith 1970d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 1971d382aafbSBarry Smith M*/ 1972d382aafbSBarry Smith 1973d382aafbSBarry Smith /*MC 1974d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 1975d382aafbSBarry Smith 1976d382aafbSBarry Smith Level: beginner 1977d382aafbSBarry Smith 1978d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 1979d382aafbSBarry Smith M*/ 1980d382aafbSBarry Smith 1981d382aafbSBarry Smith /*MC 1982d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 1983d382aafbSBarry Smith Level: beginner 1984d382aafbSBarry Smith 1985d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 1986d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 1987d382aafbSBarry Smith 1988d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 1989d382aafbSBarry Smith M*/ 1990d382aafbSBarry Smith 1991d382aafbSBarry Smith /*MC 1992d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 1993d382aafbSBarry Smith 1994d382aafbSBarry Smith Level: beginner 1995d382aafbSBarry Smith 1996d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 1997d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 1998d382aafbSBarry Smith 1999d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2000d382aafbSBarry Smith M*/ 2001d382aafbSBarry Smith 2002d382aafbSBarry Smith /*MC 2003d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2004d382aafbSBarry Smith 2005d382aafbSBarry Smith Level: beginner 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2008d382aafbSBarry Smith pass this value 2009d382aafbSBarry Smith 2010d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2011d382aafbSBarry Smith M*/ 2012d382aafbSBarry Smith 2013d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2014d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2015*014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2016*014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2017d382aafbSBarry Smith #else 2018d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2019d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2020d382aafbSBarry Smith #endif 2021d382aafbSBarry Smith #endif 2022d382aafbSBarry Smith 2023d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2024d382aafbSBarry Smith 2025d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2026d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2027d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2028d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2029d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2030d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2031d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2032d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX 2147483647 2033d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647 2034d382aafbSBarry Smith 2035d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2036e32f2f54SBarry Smith #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2037e32f2f54SBarry Smith #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2038eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a) 2039eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a) 2040d382aafbSBarry Smith 2041d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4) 2042e32f2f54SBarry Smith #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2043eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a) 2044d382aafbSBarry Smith #else 2045d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2046d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2047d382aafbSBarry Smith #endif 2048d382aafbSBarry Smith 2049d382aafbSBarry Smith #else 2050d382aafbSBarry Smith #define PetscMPIIntCheck(a) 2051d382aafbSBarry Smith #define PetscBLASIntCheck(a) 2052d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2053d382aafbSBarry Smith #define PetscMPIIntCast(a) a 2054d382aafbSBarry Smith #define PetscBLASIntCast(a) a 2055d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2056d382aafbSBarry Smith #endif 2057d382aafbSBarry Smith 2058d382aafbSBarry Smith /* 20592981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2060d382aafbSBarry Smith */ 2061d382aafbSBarry Smith #if defined(hz) 2062d382aafbSBarry Smith #undef hz 2063d382aafbSBarry Smith #endif 2064d382aafbSBarry Smith 2065d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2066d382aafbSBarry Smith 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2069d382aafbSBarry Smith #include <limits.h> 2070d382aafbSBarry Smith #endif 2071d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2072d382aafbSBarry Smith #include <sys/param.h> 2073d382aafbSBarry Smith #endif 2074d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2075d382aafbSBarry Smith #include <sys/types.h> 2076d382aafbSBarry Smith #endif 2077d382aafbSBarry Smith #if defined(MAXPATHLEN) 2078d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2079d382aafbSBarry Smith #elif defined(MAX_PATH) 2080d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2081d382aafbSBarry Smith #elif defined(_MAX_PATH) 2082d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2083d382aafbSBarry Smith #else 2084d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2085d382aafbSBarry Smith #endif 2086d382aafbSBarry Smith 2087d382aafbSBarry Smith /* Special support for C++ */ 2088d382aafbSBarry Smith #include "petscsys.hh" 20896c7e564aSBarry Smith 2090d382aafbSBarry Smith /*MC 2091d382aafbSBarry Smith 2092d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2093d382aafbSBarry Smith 2094d382aafbSBarry Smith $ 1) classic Fortran 77 style 2095d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc 2096d382aafbSBarry Smith $ XXX variablename 2097d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2098d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2099d382aafbSBarry Smith $ 2100d382aafbSBarry Smith $ 2) classic Fortran 90 style 2101d1716517SSatish Balay $#include "finclude/petscXXX.h" 2102d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2103d382aafbSBarry Smith $ XXX variablename 2104d382aafbSBarry Smith $ 2105d382aafbSBarry Smith $ 3) Using Fortran modules 2106d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2107d382aafbSBarry Smith $ use petscXXXX 2108d382aafbSBarry Smith $ XXX variablename 2109d382aafbSBarry Smith $ 2110d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2111d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2112d382aafbSBarry Smith $ use petscXXXX 2113d382aafbSBarry Smith $ type(XXX) variablename 2114e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2115d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2116d382aafbSBarry Smith 2117d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2118d382aafbSBarry Smith 2119d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2120d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2121d382aafbSBarry Smith $ integer variablename 2122d382aafbSBarry Smith $ 2123d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2124d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2125d382aafbSBarry Smith 2126d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2127d382aafbSBarry Smith for only a few PETSc functions. 2128d382aafbSBarry Smith 2129d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2130d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2131d382aafbSBarry Smith you cannot have something like 2132d382aafbSBarry Smith $ PetscInt row,col 2133d382aafbSBarry Smith $ PetscScalar val 2134d382aafbSBarry Smith $ ... 2135d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2136d382aafbSBarry Smith You must instead have 2137d382aafbSBarry Smith $ PetscInt row(1),col(1) 2138d382aafbSBarry Smith $ PetscScalar val(1) 2139d382aafbSBarry Smith $ ... 2140d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2141d382aafbSBarry Smith 2142d382aafbSBarry Smith 2143d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2144d382aafbSBarry Smith 2145d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2146d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2147d382aafbSBarry Smith 2148d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2149d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2150d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2151d382aafbSBarry Smith 2152d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2153e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2154d382aafbSBarry Smith 2155d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2156d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2157d382aafbSBarry Smith 2158d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2159d382aafbSBarry Smith automatically by "make allfortranstubs". 2160d382aafbSBarry Smith 2161e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2162d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2163d382aafbSBarry Smith include their predecessors 2164d382aafbSBarry Smith 2165d382aafbSBarry Smith Level: beginner 2166d382aafbSBarry Smith 2167d382aafbSBarry Smith M*/ 2168d382aafbSBarry Smith 2169*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2170*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2171*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2172*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2173*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2174*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 2175d382aafbSBarry Smith 2176*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2177*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2178*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2179*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2180*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2181*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*); 2182*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2183*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 2184*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 2185*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2186*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2187*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2188*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2189*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**); 2190d382aafbSBarry Smith 2191*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2192*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2193d382aafbSBarry Smith 219476bdecfbSBarry Smith /*J 2195d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2196d382aafbSBarry Smith with an optional dynamic library name, for example 2197d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2198d382aafbSBarry Smith 2199d382aafbSBarry Smith Level: beginner 2200d382aafbSBarry Smith 2201e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2202d382aafbSBarry Smith with the option --download-sprng 2203d382aafbSBarry Smith 2204d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom 220576bdecfbSBarry Smith J*/ 2206d382aafbSBarry Smith #define PetscRandomType char* 2207d382aafbSBarry Smith #define PETSCRAND "rand" 2208d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2209d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2210d382aafbSBarry Smith 2211d382aafbSBarry Smith /* Logging support */ 2212*014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2213d382aafbSBarry Smith 2214*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]); 2215d382aafbSBarry Smith 2216d382aafbSBarry Smith /*S 2217d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2218d382aafbSBarry Smith 2219d382aafbSBarry Smith Level: intermediate 2220d382aafbSBarry Smith 2221d382aafbSBarry Smith Concepts: random numbers 2222d382aafbSBarry Smith 2223d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2224d382aafbSBarry Smith S*/ 2225d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2226d382aafbSBarry Smith 2227d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2228*014dd563SJed Brown PETSC_EXTERN PetscFList PetscRandomList; 2229*014dd563SJed Brown PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled; 2230d382aafbSBarry Smith 2231*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []); 2232*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 2233*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void); 2234*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, const PetscRandomType); 2235*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 2236*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, const PetscRandomType*); 2237*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,char*); 2238*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2239d382aafbSBarry Smith 2240d382aafbSBarry Smith /*MC 2241d382aafbSBarry Smith PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2242d382aafbSBarry Smith 2243d382aafbSBarry Smith Synopsis: 22441890ba74SBarry Smith PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2245d382aafbSBarry Smith 2246d382aafbSBarry Smith Not Collective 2247d382aafbSBarry Smith 2248d382aafbSBarry Smith Input Parameters: 2249d382aafbSBarry Smith + name - The name of a new user-defined creation routine 2250d382aafbSBarry Smith . path - The path (either absolute or relative) of the library containing this routine 2251d382aafbSBarry Smith . func_name - The name of routine to create method context 2252d382aafbSBarry Smith - create_func - The creation routine itself 2253d382aafbSBarry Smith 2254d382aafbSBarry Smith Notes: 2255d382aafbSBarry Smith PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2256d382aafbSBarry Smith 2257d382aafbSBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2258d382aafbSBarry Smith 2259d382aafbSBarry Smith Sample usage: 2260d382aafbSBarry Smith .vb 2261d382aafbSBarry Smith PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2262d382aafbSBarry Smith .ve 2263d382aafbSBarry Smith 2264d382aafbSBarry Smith Then, your random type can be chosen with the procedural interface via 2265d382aafbSBarry Smith .vb 2266d382aafbSBarry Smith PetscRandomCreate(MPI_Comm, PetscRandom *); 2267d382aafbSBarry Smith PetscRandomSetType(PetscRandom,"my_random_name"); 2268d382aafbSBarry Smith .ve 2269d382aafbSBarry Smith or at runtime via the option 2270d382aafbSBarry Smith .vb 2271d382aafbSBarry Smith -random_type my_random_name 2272d382aafbSBarry Smith .ve 2273d382aafbSBarry Smith 2274d382aafbSBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2275d382aafbSBarry Smith 2276d382aafbSBarry Smith For an example of the code needed to interface your own random number generator see 2277d382aafbSBarry Smith src/sys/random/impls/rand/rand.c 2278d382aafbSBarry Smith 2279d382aafbSBarry Smith Level: advanced 2280d382aafbSBarry Smith 2281d382aafbSBarry Smith .keywords: PetscRandom, register 2282d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2283d382aafbSBarry Smith M*/ 2284d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2285d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2286d382aafbSBarry Smith #else 2287d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2288d382aafbSBarry Smith #endif 2289d382aafbSBarry Smith 2290*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2291*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2292*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2293*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2294*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2295*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2296*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2297*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2298*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2299d382aafbSBarry Smith 2300*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2301*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2302*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2303*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2304*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2305*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2306*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 2307d382aafbSBarry Smith 2308*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2309*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2310*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2311*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 2312*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2313*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2314*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2315*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2316*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2317*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2318*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2319*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*); 2320*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int); 2321d382aafbSBarry Smith 2322d382aafbSBarry Smith /* 2323d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2324d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2325d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2326d382aafbSBarry Smith PetscBinarySeek(). 2327d382aafbSBarry Smith */ 2328d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2329d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2330d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2331d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2332d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2333d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2334d382aafbSBarry Smith 2335d382aafbSBarry Smith /*E 2336d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2337d382aafbSBarry Smith 2338d382aafbSBarry Smith Level: advanced 2339d382aafbSBarry Smith 2340d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2341d382aafbSBarry Smith E*/ 2342d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2343*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2344*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2345*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2346d382aafbSBarry Smith 2347*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2348*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2349*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2350*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2351*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2352*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2353d382aafbSBarry Smith 2354*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2355*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2356*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2357*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2358*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2359d382aafbSBarry Smith 2360*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2361d382aafbSBarry Smith 2362d382aafbSBarry Smith /*E 2363d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2364d382aafbSBarry Smith 2365d382aafbSBarry Smith Level: beginner 2366d382aafbSBarry Smith 2367d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2368d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2369d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2370d382aafbSBarry Smith E*/ 237111f088b5SMatthew G Knepley typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode; 2372d382aafbSBarry Smith 2373d382aafbSBarry Smith /*MC 2374d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2375d382aafbSBarry Smith 2376d382aafbSBarry Smith Level: beginner 2377d382aafbSBarry Smith 2378d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2379eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2380eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2381d382aafbSBarry Smith 2382d382aafbSBarry Smith M*/ 2383d382aafbSBarry Smith 2384d382aafbSBarry Smith /*MC 2385d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2386d382aafbSBarry Smith value into that location 2387d382aafbSBarry Smith 2388d382aafbSBarry Smith Level: beginner 2389d382aafbSBarry Smith 2390d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2391eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2392eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2393d382aafbSBarry Smith 2394d382aafbSBarry Smith M*/ 2395d382aafbSBarry Smith 2396d382aafbSBarry Smith /*MC 2397d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2398d382aafbSBarry Smith 2399d382aafbSBarry Smith Level: beginner 2400d382aafbSBarry Smith 2401d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2402d382aafbSBarry Smith 2403d382aafbSBarry Smith M*/ 2404d382aafbSBarry Smith 2405d382aafbSBarry Smith /*S 2406d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2407d382aafbSBarry Smith 2408d382aafbSBarry Smith Level: advanced 2409d382aafbSBarry Smith 2410d382aafbSBarry Smith Concepts: communicator, create 2411d382aafbSBarry Smith S*/ 2412d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2413d382aafbSBarry Smith 2414d382aafbSBarry Smith struct _n_PetscSubcomm { 2415d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2416d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2417d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 2418d382aafbSBarry Smith PetscInt n; /* num of subcommunicators under the parent communicator */ 2419d382aafbSBarry Smith PetscInt color; /* color of processors belong to this communicator */ 2420d382aafbSBarry Smith }; 2421d382aafbSBarry Smith 2422638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 2423*014dd563SJed Brown PETSC_EXTERN const char *PetscSubcommTypes[]; 2424638faf0bSHong Zhang 2425*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2426*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2427*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2428*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 2429*014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt); 2430d382aafbSBarry Smith 243182a7e548SBarry Smith #include <petscctable.h> 243282a7e548SBarry Smith 24336c7e564aSBarry Smith 24349e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */ 24359e03d832SJed Brown #undef __FUNCT__ 24369e03d832SJed Brown #define __FUNCT__ "User provided function" 24379e03d832SJed Brown 2438d382aafbSBarry Smith #endif 2439