1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 111c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 121c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 131cc8b206SBarry Smith directory as the other PETSc include files. 14d382aafbSBarry Smith */ 152c8e378dSBarry Smith #include <petscconf.h> 161c77a0c5SBarry Smith #include <petscconf_poison.h> 172c8e378dSBarry Smith #include <petscfix.h> 18d382aafbSBarry Smith 1973fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2073fca5a0SBarry Smith /* 2173fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2273fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2373fca5a0SBarry Smith */ 24216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2573fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2673fca5a0SBarry Smith # endif 27216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2873fca5a0SBarry Smith # define _BSD_SOURCE 2973fca5a0SBarry Smith # endif 3007f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3107f00807SSatish Balay # define _DEFAULT_SOURCE 3207f00807SSatish Balay # endif 33ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 34ea0fecefSShri Abhyankar # define _GNU_SOURCE 35ea0fecefSShri Abhyankar # endif 3673fca5a0SBarry Smith #endif 3773fca5a0SBarry Smith 38df4397b0SStefano Zampini #include <petscsystypes.h> 39df4397b0SStefano Zampini 40d382aafbSBarry Smith /* ========================================================================== */ 41d382aafbSBarry Smith /* 422c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 43d382aafbSBarry Smith */ 441ec50b02SJed Brown #if defined(__cplusplus) 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 461ec50b02SJed Brown #else 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 481ec50b02SJed Brown #endif 49d382aafbSBarry Smith 50c5e4d11fSDmitry Karpeev /* ========================================================================== */ 51c5e4d11fSDmitry Karpeev /* 52c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 531cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 541cc8b206SBarry Smith file within an extern "C". 55c5e4d11fSDmitry Karpeev */ 56c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 57c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 58c5e4d11fSDmitry Karpeev #endif 59c5e4d11fSDmitry Karpeev 60ed938b00SJed Brown #if defined(__cplusplus) 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 62ed938b00SJed Brown #else 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 64ed938b00SJed Brown #endif 65ed938b00SJed Brown 66ed938b00SJed Brown #if defined(__cplusplus) 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 68ed938b00SJed Brown #else 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 70ed938b00SJed Brown #endif 71ed938b00SJed Brown 7258c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7358c433abSLisandro Dalcin 74ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 75014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 76014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7826703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7926703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8026703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8126703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8226703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 83014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 84014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 86d382aafbSBarry Smith #else 87014dd563SJed Brown # define PETSC_DLLEXPORT 88014dd563SJed Brown # define PETSC_DLLIMPORT 8921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 90014dd563SJed Brown #endif 91014dd563SJed Brown 92014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 94014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 96014dd563SJed Brown #endif 97014dd563SJed Brown 981cc8b206SBarry Smith /* 991cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1001cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1011cc8b206SBarry Smith used from C and are always visible in the shared libraries 1021cc8b206SBarry Smith */ 1032c280183SJed Brown #if defined(__cplusplus) 104014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 105638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10621f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 107014dd563SJed Brown #else 108014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 109638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1106258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 111d382aafbSBarry Smith #endif 11227710113SBarry Smith 113193d546dSJacob Faibussowitsch #if defined(PETSC_USE_SINGLE_LIBRARY) 114193d546dSJacob Faibussowitsch # define PETSC_SINGLE_LIBRARY_INTERN PETSC_INTERN 115193d546dSJacob Faibussowitsch #else 116193d546dSJacob Faibussowitsch # define PETSC_SINGLE_LIBRARY_INTERN PETSC_EXTERN 117193d546dSJacob Faibussowitsch #endif 118193d546dSJacob Faibussowitsch 119*0609f53bSJacob Faibussowitsch /* C++11 features */ 120030f984aSJacob Faibussowitsch #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX11) 121030f984aSJacob Faibussowitsch # define PETSC_NULLPTR nullptr 122030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR constexpr 123030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT noexcept 124030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) noexcept(cond_) 125030f984aSJacob Faibussowitsch #else 126030f984aSJacob Faibussowitsch # define PETSC_NULLPTR NULL 127030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR 128030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT 129030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) 130*0609f53bSJacob Faibussowitsch #endif /* __cplusplus && PETSC_HAVE_CXX_DIALECT_CXX11 */ 131*0609f53bSJacob Faibussowitsch 132*0609f53bSJacob Faibussowitsch /* C++14 features */ 133*0609f53bSJacob Faibussowitsch #if defined(PETSC_HAVE_CXX_DIALECT_CXX14) 134*0609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_14 PETSC_CONSTEXPR 135*0609f53bSJacob Faibussowitsch #else 136*0609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_14 137030f984aSJacob Faibussowitsch #endif 138030f984aSJacob Faibussowitsch 139*0609f53bSJacob Faibussowitsch /* C++17 features */ 140030f984aSJacob Faibussowitsch #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX17) 141030f984aSJacob Faibussowitsch # define PETSC_NODISCARD [[nodiscard]] 142*0609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_17 PETSC_CONSTEXPR 143030f984aSJacob Faibussowitsch #else 144030f984aSJacob Faibussowitsch # define PETSC_NODISCARD 145*0609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_17 146030f984aSJacob Faibussowitsch #endif 147030f984aSJacob Faibussowitsch 1482c8e378dSBarry Smith #include <petscversion.h> 149a17b96a8SKyle Gerard Felker #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://petsc.org/\n" 150d382aafbSBarry Smith 151d382aafbSBarry Smith /* ========================================================================== */ 152d382aafbSBarry Smith 153d382aafbSBarry Smith /* 154d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 155d382aafbSBarry Smith 156d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 157d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 158d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 159d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 160d382aafbSBarry Smith mpicxx.h directly in their code 161d382aafbSBarry Smith */ 162fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 163d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 164fa9e63e2SJed Brown #endif 165fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 166d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 167fa9e63e2SJed Brown #endif 168e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 169e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 170e771154cSJed Brown #else 1712c8e378dSBarry Smith # include <mpi.h> 172e771154cSJed Brown #endif 17365013866SBarry Smith 1744e1ad211SJed Brown /*MC 1754e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1764e1ad211SJed Brown 1774e1ad211SJed Brown Notes: 1781393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1791393a3abSPatrick Sanan 1804e1ad211SJed Brown Typical usage is within normal code, 1814e1ad211SJed Brown 1824e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1834e1ad211SJed Brown 1844e1ad211SJed Brown but can also be used in the preprocessor, 1854e1ad211SJed Brown 1864e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1874e1ad211SJed Brown $ ... 1884e1ad211SJed Brown $ #else 1894e1ad211SJed Brown 1901393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1914e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1924e1ad211SJed Brown 1931393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1941393a3abSPatrick Sanan 1951393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1961393a3abSPatrick Sanan 1974e1ad211SJed Brown Developer Notes: 1984e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1994e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 2004e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 2014e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 2024e1ad211SJed Brown 2034e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 2044e1ad211SJed Brown implementation of variadic macros. 2054e1ad211SJed Brown 2064e1ad211SJed Brown Level: developer 2074e1ad211SJed Brown M*/ 2084e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 2094e1ad211SJed Brown # define PetscDefined_arg_1 shift, 2104e1ad211SJed Brown # define PetscDefined_arg_ shift, 2114e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 2124e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 2134e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 214c7faf32eSJacob Faibussowitsch # define PetscDefined____(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 215c7faf32eSJacob Faibussowitsch # define PetscDefined___(value) PetscDefined____(PetscDefined_arg_ ## value) 216c7faf32eSJacob Faibussowitsch # define PetscDefined__(d) PetscDefined___(d) 217c7faf32eSJacob Faibussowitsch # define PetscDefined_(d) PetscDefined__(PETSC_ ## d) 218c7faf32eSJacob Faibussowitsch # define PetscDefined(d) PetscDefined_(d) 2194e1ad211SJed Brown #endif 2204e1ad211SJed Brown 221d382aafbSBarry Smith /* 222a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 223a7886beaSBarry Smith This usually happens because 224a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 225a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 226a7886beaSBarry Smith */ 227a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 228c9b973beSBarry Smith # if !defined(MPIUNI_H) 229a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 230a7886beaSBarry Smith # endif 23141f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 23241f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 23341f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 23441f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 23541f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 23641f4af4cSSatish Balay # endif 23741f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 23841f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 23941f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 24041f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 24141f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 24241f4af4cSSatish Balay # endif 243a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 24441f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 245a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 246ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 247a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 248a7886beaSBarry Smith # endif 249a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 250a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 251a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 252ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 253c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 254a7886beaSBarry Smith # endif 255d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 256d97fd468SStefano Zampini # if !defined(MSMPI_VER) 257d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 258d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 259d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 260d97fd468SStefano Zampini # endif 261d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 262d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 263a7886beaSBarry Smith #endif 264a7886beaSBarry Smith 265a7886beaSBarry Smith /* 2662981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 267d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 268d382aafbSBarry Smith */ 269d382aafbSBarry Smith #include <stdio.h> 270d382aafbSBarry Smith 271d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 272d382aafbSBarry Smith #if !defined(MPIAPI) 273d382aafbSBarry Smith #define MPIAPI 274d382aafbSBarry Smith #endif 275d382aafbSBarry Smith 2761cc8b206SBarry Smith /* 2771cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2781cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2791cc8b206SBarry Smith does not match the actual type of the argument being passed in 2801cc8b206SBarry Smith */ 281c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 282894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 283894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2848ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2858ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 286894dd566SJed Brown # endif 287894dd566SJed Brown #endif 288894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 289894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2908ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2918ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 292894dd566SJed Brown #endif 293b3506946SBarry Smith 2945a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 295df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 296e28ce29aSPatrick Sanan 297e28ce29aSPatrick Sanan /*MC 298e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 299e28ce29aSPatrick Sanan 300e28ce29aSPatrick Sanan Notes: 301e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 302e28ce29aSPatrick Sanan 303e28ce29aSPatrick Sanan Level: beginner 304e28ce29aSPatrick Sanan 305e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 306e28ce29aSPatrick Sanan M*/ 307e28ce29aSPatrick Sanan 30837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 309bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 310a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 311fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 312bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 313a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 314f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 315bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 316a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 317236ed0a3SSatish Balay #else 318bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 319236ed0a3SSatish Balay #endif 320b7b8f77aSBarry Smith 3217cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 322b7b8f77aSBarry Smith 323d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 324bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 325a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 326d382aafbSBarry Smith #else 327d382aafbSBarry Smith # define MPIU_INT MPI_INT 328a05e1a72SSatish Balay # define PetscInt_FMT "d" 329d382aafbSBarry Smith #endif 330d382aafbSBarry Smith 331503cfb0cSBarry Smith /* 332503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 333503cfb0cSBarry Smith */ 334e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 335d382aafbSBarry Smith 336d382aafbSBarry Smith /* 337d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 338d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 339d382aafbSBarry Smith */ 340014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 341d382aafbSBarry Smith 342d382aafbSBarry Smith /* 343d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 344d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 345d382aafbSBarry Smith */ 346014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 347d382aafbSBarry Smith 348d382aafbSBarry Smith /*MC 349d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 350d382aafbSBarry Smith 351d382aafbSBarry Smith Synopsis: 352aaa7dc30SBarry Smith #include <petscsys.h> 353ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 354d382aafbSBarry Smith 355eca87e8dSBarry Smith Not Collective 356eca87e8dSBarry Smith 357d382aafbSBarry Smith Input Parameters: 358d382aafbSBarry Smith . cond - condition or expression 359d382aafbSBarry Smith 360e28ce29aSPatrick Sanan Notes: 361e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 362d382aafbSBarry Smith branch is unlikely. 363d382aafbSBarry Smith 364d382aafbSBarry Smith Level: advanced 365d382aafbSBarry Smith 366cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 367d382aafbSBarry Smith M*/ 368d382aafbSBarry Smith 369d382aafbSBarry Smith /*MC 370d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 371d382aafbSBarry Smith 372d382aafbSBarry Smith Synopsis: 373aaa7dc30SBarry Smith #include <petscsys.h> 37423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 375d382aafbSBarry Smith 376eca87e8dSBarry Smith Not Collective 377eca87e8dSBarry Smith 378d382aafbSBarry Smith Input Parameters: 379d382aafbSBarry Smith . cond - condition or expression 380d382aafbSBarry Smith 381e28ce29aSPatrick Sanan Notes: 382e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 383d382aafbSBarry Smith branch is likely. 384d382aafbSBarry Smith 385d382aafbSBarry Smith Level: advanced 386d382aafbSBarry Smith 387d382aafbSBarry Smith .seealso: PetscUnlikely() 388d382aafbSBarry Smith M*/ 389d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 390d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 391d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 392d382aafbSBarry Smith #else 393cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 394cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 395d382aafbSBarry Smith #endif 396d382aafbSBarry Smith 397cf9c20a2SJed Brown /*MC 398cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 399cf9c20a2SJed Brown 400cf9c20a2SJed Brown Synopsis: 401cf9c20a2SJed Brown #include <petscsys.h> 402cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 403cf9c20a2SJed Brown 404cf9c20a2SJed Brown Not Collective 405cf9c20a2SJed Brown 406cf9c20a2SJed Brown Input Parameters: 407cf9c20a2SJed Brown . cond - condition or expression 408cf9c20a2SJed Brown 409cf9c20a2SJed Brown Notes: 410cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 411cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 412cf9c20a2SJed Brown 413cf9c20a2SJed Brown Level: advanced 414cf9c20a2SJed Brown 415cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 416cf9c20a2SJed Brown M*/ 417cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 418cf9c20a2SJed Brown 419c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 420c8b9133aSSatish Balay 4215c993f7fSStefano Zampini #if defined(__NEC__) 4225c993f7fSStefano Zampini # define PetscPragmaSIMD _Pragma("_NEC ivdep") 4235c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 424c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 4251dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 426c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 427160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 428c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 429160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 430160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 431c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 432c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 433c8b9133aSSatish Balay #else 434c8b9133aSSatish Balay # define PetscPragmaSIMD 435c8b9133aSSatish Balay #endif 436c8b9133aSSatish Balay 437d382aafbSBarry Smith /* 438d382aafbSBarry Smith Declare extern C stuff after including external header files 439d382aafbSBarry Smith */ 440d382aafbSBarry Smith 4416a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 44270b3c8c7SBarry Smith 4436edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 4448b49ba18SBarry Smith /* 445390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4468b49ba18SBarry Smith */ 4478b49ba18SBarry Smith #include <petscmath.h> 4488b49ba18SBarry Smith 4496a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 450d382aafbSBarry Smith 451d382aafbSBarry Smith /*MC 4520298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 453d382aafbSBarry Smith 454d382aafbSBarry Smith Level: beginner 455d382aafbSBarry Smith 456e28ce29aSPatrick Sanan Note: 457e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 458d382aafbSBarry Smith some default 459d382aafbSBarry Smith 460e28ce29aSPatrick Sanan Fortran Notes: 461e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 462d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 463d382aafbSBarry Smith 464e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 465d382aafbSBarry Smith 466d382aafbSBarry Smith M*/ 4670298fd71SBarry Smith #define PETSC_IGNORE NULL 468d382aafbSBarry Smith 469c528d872SBarry Smith /* This is deprecated */ 470c528d872SBarry Smith #define PETSC_NULL NULL 471c528d872SBarry Smith 472d382aafbSBarry Smith /*MC 473557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 474557d4da8SBarry Smith where you wish PETSc to use the default. 475557d4da8SBarry Smith 476557d4da8SBarry Smith Level: beginner 477557d4da8SBarry Smith 478e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 479557d4da8SBarry Smith 480557d4da8SBarry Smith M*/ 481557d4da8SBarry Smith #define PETSC_DECIDE -1 482557d4da8SBarry Smith 483557d4da8SBarry Smith /*MC 484d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 485d382aafbSBarry Smith where you wish PETSc to compute the required value. 486d382aafbSBarry Smith 487d382aafbSBarry Smith Level: beginner 488d382aafbSBarry Smith 489e28ce29aSPatrick Sanan Developer Note: 490e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 491557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 492557d4da8SBarry Smith 4930298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 494d382aafbSBarry Smith 495d382aafbSBarry Smith M*/ 496d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 497d382aafbSBarry Smith 498d382aafbSBarry Smith /*MC 499557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 500557d4da8SBarry Smith where you wish PETSc to use the default. 501557d4da8SBarry Smith 502557d4da8SBarry Smith Level: beginner 503557d4da8SBarry Smith 504e28ce29aSPatrick Sanan Fortran Notes: 505e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 506557d4da8SBarry Smith 5070298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 508557d4da8SBarry Smith 509557d4da8SBarry Smith M*/ 510557d4da8SBarry Smith #define PETSC_DEFAULT -2 511557d4da8SBarry Smith 512557d4da8SBarry Smith /*MC 513d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 514ea8fe74dSBarry Smith all the processes that PETSc knows about. 515d382aafbSBarry Smith 516d382aafbSBarry Smith Level: beginner 517d382aafbSBarry Smith 518e28ce29aSPatrick Sanan Notes: 519e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 520d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 521d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 522a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 523a990b902SBarry Smith 524a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 525a990b902SBarry Smith is called because it may not have a valid value yet. 526d382aafbSBarry Smith 527d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 528d382aafbSBarry Smith 529d382aafbSBarry Smith M*/ 530014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 531d382aafbSBarry Smith 532d382aafbSBarry Smith /*MC 533503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 534d382aafbSBarry Smith 535d382aafbSBarry Smith Level: beginner 536d382aafbSBarry Smith 537e28ce29aSPatrick Sanan Notes: 538e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 539a990b902SBarry Smith 540d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 541d382aafbSBarry Smith 542d382aafbSBarry Smith M*/ 543d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 544d382aafbSBarry Smith 5456de5d289SStefano Zampini /*MC 5466de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5476de5d289SStefano Zampini MPI with MPI_Init_thread. 5486de5d289SStefano Zampini 5496de5d289SStefano Zampini Level: beginner 5506de5d289SStefano Zampini 5516de5d289SStefano Zampini Notes: 5526de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5536de5d289SStefano Zampini 5546de5d289SStefano Zampini .seealso: PetscInitialize() 5556de5d289SStefano Zampini 5566de5d289SStefano Zampini M*/ 5576de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5586de5d289SStefano Zampini 559d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5608ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 561014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 562014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5634cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 564d382aafbSBarry Smith 565014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 568d382aafbSBarry Smith 5697381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 57005035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 571cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5723c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5737381773fSBarry Smith #endif 5747381773fSBarry Smith 57505035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 57605035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 57705035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5783c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 57905035670SJunchao Zhang #endif 58005035670SJunchao Zhang 58159e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 58259e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 58359e55d94SJunchao Zhang #endif 58459e55d94SJunchao Zhang 58571438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 58671438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 58771438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 58871438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 58971438e86SJunchao Zhang #endif 59071438e86SJunchao Zhang 591540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 592540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 593540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 594540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 595540e20f2SPierre Jolivet #endif 596540e20f2SPierre Jolivet 597d382aafbSBarry Smith /*MC 59895dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 599d382aafbSBarry Smith 600eca87e8dSBarry Smith Synopsis: 601aaa7dc30SBarry Smith #include <petscsys.h> 602eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 603eca87e8dSBarry Smith 604eca87e8dSBarry Smith Not Collective 605eca87e8dSBarry Smith 606d382aafbSBarry Smith Input Parameter: 607d382aafbSBarry Smith . m - number of bytes to allocate 608d382aafbSBarry Smith 609d382aafbSBarry Smith Output Parameter: 610d382aafbSBarry Smith . result - memory allocated 611d382aafbSBarry Smith 612d382aafbSBarry Smith Level: beginner 613d382aafbSBarry Smith 61449d7da52SJed Brown Notes: 61549d7da52SJed Brown Memory is always allocated at least double aligned 616d382aafbSBarry Smith 61749d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 618d382aafbSBarry Smith 619d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 620d382aafbSBarry Smith 621d382aafbSBarry Smith M*/ 622071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 623d382aafbSBarry Smith 624d382aafbSBarry Smith /*MC 6253221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 6263221ece2SMatthew G. Knepley 6273221ece2SMatthew G. Knepley Synopsis: 6283221ece2SMatthew G. Knepley #include <petscsys.h> 6293221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 6303221ece2SMatthew G. Knepley 6313221ece2SMatthew G. Knepley Not Collective 6323221ece2SMatthew G. Knepley 6333221ece2SMatthew G. Knepley Input Parameters: 6343221ece2SMatthew G. Knepley + m - number of bytes to allocate 63592f119d6SBarry Smith - result - previous memory 6363221ece2SMatthew G. Knepley 6373221ece2SMatthew G. Knepley Output Parameter: 6383221ece2SMatthew G. Knepley . result - new memory allocated 6393221ece2SMatthew G. Knepley 6403221ece2SMatthew G. Knepley Level: developer 6413221ece2SMatthew G. Knepley 6423221ece2SMatthew G. Knepley Notes: 6433221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6443221ece2SMatthew G. Knepley 6453221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6463221ece2SMatthew G. Knepley 6473221ece2SMatthew G. Knepley M*/ 6483221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6493221ece2SMatthew G. Knepley 6503221ece2SMatthew G. Knepley /*MC 651503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 652d382aafbSBarry Smith 653d382aafbSBarry Smith Synopsis: 654aaa7dc30SBarry Smith #include <petscsys.h> 655d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 656d382aafbSBarry Smith 657eca87e8dSBarry Smith Not Collective 658eca87e8dSBarry Smith 659eca87e8dSBarry Smith Input Parameters: 660eca87e8dSBarry Smith . addr - address to align (any pointer type) 661eca87e8dSBarry Smith 662d382aafbSBarry Smith Level: developer 663d382aafbSBarry Smith 664d382aafbSBarry Smith .seealso: PetscMallocAlign() 665d382aafbSBarry Smith 666d382aafbSBarry Smith M*/ 667d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 668d382aafbSBarry Smith 669d382aafbSBarry Smith /*MC 6708f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 6718f51dc47SJunchao Zhang 6728f51dc47SJunchao Zhang Synopsis: 6738f51dc47SJunchao Zhang #include <petscsys.h> 6748f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 6758f51dc47SJunchao Zhang 6768f51dc47SJunchao Zhang Not Collective 6778f51dc47SJunchao Zhang 6788f51dc47SJunchao Zhang Input Parameter: 6798f51dc47SJunchao Zhang . m - number of bytes to allocate 6808f51dc47SJunchao Zhang 6818f51dc47SJunchao Zhang Output Parameter: 6828f51dc47SJunchao Zhang . result - memory allocated 6838f51dc47SJunchao Zhang 6848f51dc47SJunchao Zhang Level: beginner 6858f51dc47SJunchao Zhang 6868f51dc47SJunchao Zhang Notes: 6878f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 6888f51dc47SJunchao Zhang 6898f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 6908f51dc47SJunchao Zhang 6918f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 6928f51dc47SJunchao Zhang 6938f51dc47SJunchao Zhang M*/ 6948f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 6958f51dc47SJunchao Zhang 6968f51dc47SJunchao Zhang /*MC 697785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 698d382aafbSBarry Smith 699eca87e8dSBarry Smith Synopsis: 700aaa7dc30SBarry Smith #include <petscsys.h> 701785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 702785e854fSJed Brown 703785e854fSJed Brown Not Collective 704785e854fSJed Brown 705785e854fSJed Brown Input Parameter: 706390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 707785e854fSJed Brown 708785e854fSJed Brown Output Parameter: 7091fe1b817SJunchao Zhang . r1 - memory allocated 710785e854fSJed Brown 711e28ce29aSPatrick Sanan Note: 712e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 713390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 714390e1bf2SBarry Smith $ PetscInt *id; 715390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 716390e1bf2SBarry Smith not 717390e1bf2SBarry Smith $ PetscInt *id; 718390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 719390e1bf2SBarry Smith 7201fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 721390e1bf2SBarry Smith 722390e1bf2SBarry Smith Level: beginner 723785e854fSJed Brown 7241795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 725785e854fSJed Brown 726785e854fSJed Brown M*/ 7272553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 728785e854fSJed Brown 729785e854fSJed Brown /*MC 7301795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 7311795a4d1SJed Brown 7321795a4d1SJed Brown Synopsis: 733aaa7dc30SBarry Smith #include <petscsys.h> 7341795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 7351795a4d1SJed Brown 7361795a4d1SJed Brown Not Collective 7371795a4d1SJed Brown 7381795a4d1SJed Brown Input Parameter: 7391795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7401795a4d1SJed Brown 7411795a4d1SJed Brown Output Parameter: 7421fe1b817SJunchao Zhang . r1 - memory allocated 7431795a4d1SJed Brown 744e28ce29aSPatrick Sanan Notes: 745e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 746390e1bf2SBarry Smith 747390e1bf2SBarry Smith Level: beginner 7481795a4d1SJed Brown 7491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7501795a4d1SJed Brown 7511795a4d1SJed Brown M*/ 7522553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7531795a4d1SJed Brown 7541795a4d1SJed Brown /*MC 755dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 756d382aafbSBarry Smith 757eca87e8dSBarry Smith Synopsis: 758aaa7dc30SBarry Smith #include <petscsys.h> 759dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 760eca87e8dSBarry Smith 761eca87e8dSBarry Smith Not Collective 762eca87e8dSBarry Smith 763d8d19677SJose E. Roman Input Parameters: 764d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 765dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 766d382aafbSBarry Smith 767d8d19677SJose E. Roman Output Parameters: 768d382aafbSBarry Smith + r1 - memory allocated in first chunk 769d382aafbSBarry Smith - r2 - memory allocated in second chunk 770d382aafbSBarry Smith 771d382aafbSBarry Smith Level: developer 772d382aafbSBarry Smith 7731795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 774d382aafbSBarry Smith 775d382aafbSBarry Smith M*/ 7762553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 777d382aafbSBarry Smith 778d382aafbSBarry Smith /*MC 7791795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 780d382aafbSBarry Smith 781eca87e8dSBarry Smith Synopsis: 782aaa7dc30SBarry Smith #include <petscsys.h> 7831795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 784eca87e8dSBarry Smith 785eca87e8dSBarry Smith Not Collective 786eca87e8dSBarry Smith 787d8d19677SJose E. Roman Input Parameters: 788d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7891795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7901795a4d1SJed Brown 791d8d19677SJose E. Roman Output Parameters: 7921795a4d1SJed Brown + r1 - memory allocated in first chunk 7931795a4d1SJed Brown - r2 - memory allocated in second chunk 7941795a4d1SJed Brown 7951795a4d1SJed Brown Level: developer 7961795a4d1SJed Brown 7971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7981795a4d1SJed Brown 7991795a4d1SJed Brown M*/ 8002553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 8011795a4d1SJed Brown 8021795a4d1SJed Brown /*MC 803dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 804d382aafbSBarry Smith 805d382aafbSBarry Smith Synopsis: 806aaa7dc30SBarry Smith #include <petscsys.h> 807dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 808d382aafbSBarry Smith 809d382aafbSBarry Smith Not Collective 810d382aafbSBarry Smith 811d8d19677SJose E. Roman Input Parameters: 812d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 813d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 814dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 815d382aafbSBarry Smith 816d8d19677SJose E. Roman Output Parameters: 817d382aafbSBarry Smith + r1 - memory allocated in first chunk 818d382aafbSBarry Smith . r2 - memory allocated in second chunk 819d382aafbSBarry Smith - r3 - memory allocated in third chunk 820d382aafbSBarry Smith 821d382aafbSBarry Smith Level: developer 822d382aafbSBarry Smith 8231795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 824d382aafbSBarry Smith 825d382aafbSBarry Smith M*/ 8262553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 827d382aafbSBarry Smith 828d382aafbSBarry Smith /*MC 8291795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 830d382aafbSBarry Smith 831eca87e8dSBarry Smith Synopsis: 832aaa7dc30SBarry Smith #include <petscsys.h> 8331795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 834eca87e8dSBarry Smith 835eca87e8dSBarry Smith Not Collective 836eca87e8dSBarry Smith 837d8d19677SJose E. Roman Input Parameters: 838d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 839d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8401795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8411795a4d1SJed Brown 842d8d19677SJose E. Roman Output Parameters: 8431795a4d1SJed Brown + r1 - memory allocated in first chunk 8441795a4d1SJed Brown . r2 - memory allocated in second chunk 8451795a4d1SJed Brown - r3 - memory allocated in third chunk 8461795a4d1SJed Brown 8471795a4d1SJed Brown Level: developer 8481795a4d1SJed Brown 8491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8501795a4d1SJed Brown 8511795a4d1SJed Brown M*/ 8522553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8531795a4d1SJed Brown 8541795a4d1SJed Brown /*MC 855dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 856d382aafbSBarry Smith 857d382aafbSBarry Smith Synopsis: 858aaa7dc30SBarry Smith #include <petscsys.h> 859dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 860d382aafbSBarry Smith 861d382aafbSBarry Smith Not Collective 862d382aafbSBarry Smith 863d8d19677SJose E. Roman Input Parameters: 864d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 865d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 866d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 867dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 868d382aafbSBarry Smith 869d8d19677SJose E. Roman Output Parameters: 870d382aafbSBarry Smith + r1 - memory allocated in first chunk 871d382aafbSBarry Smith . r2 - memory allocated in second chunk 872d382aafbSBarry Smith . r3 - memory allocated in third chunk 873d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 874d382aafbSBarry Smith 875d382aafbSBarry Smith Level: developer 876d382aafbSBarry Smith 8771795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 878d382aafbSBarry Smith 879d382aafbSBarry Smith M*/ 8802553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 881d382aafbSBarry Smith 882d382aafbSBarry Smith /*MC 8831795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 884d382aafbSBarry Smith 885eca87e8dSBarry Smith Synopsis: 886aaa7dc30SBarry Smith #include <petscsys.h> 8871795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 888eca87e8dSBarry Smith 889eca87e8dSBarry Smith Not Collective 890eca87e8dSBarry Smith 891e28ce29aSPatrick Sanan Input Parameters: 892d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 893d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 894d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8951795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8961795a4d1SJed Brown 897e28ce29aSPatrick Sanan Output Parameters: 8981795a4d1SJed Brown + r1 - memory allocated in first chunk 8991795a4d1SJed Brown . r2 - memory allocated in second chunk 9001795a4d1SJed Brown . r3 - memory allocated in third chunk 9011795a4d1SJed Brown - r4 - memory allocated in fourth chunk 9021795a4d1SJed Brown 9031795a4d1SJed Brown Level: developer 9041795a4d1SJed Brown 9051795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 9061795a4d1SJed Brown 9071795a4d1SJed Brown M*/ 9082553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 9091795a4d1SJed Brown 9101795a4d1SJed Brown /*MC 911dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 912d382aafbSBarry Smith 913d382aafbSBarry Smith Synopsis: 914aaa7dc30SBarry Smith #include <petscsys.h> 915dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 916d382aafbSBarry Smith 917d382aafbSBarry Smith Not Collective 918d382aafbSBarry Smith 919e28ce29aSPatrick Sanan Input Parameters: 920d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 921d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 922d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 923d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 924dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 925d382aafbSBarry Smith 926e28ce29aSPatrick Sanan Output Parameters: 927d382aafbSBarry Smith + r1 - memory allocated in first chunk 928d382aafbSBarry Smith . r2 - memory allocated in second chunk 929d382aafbSBarry Smith . r3 - memory allocated in third chunk 930d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 931d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 932d382aafbSBarry Smith 933d382aafbSBarry Smith Level: developer 934d382aafbSBarry Smith 9351795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 936d382aafbSBarry Smith 937d382aafbSBarry Smith M*/ 9382553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 939d382aafbSBarry Smith 940d382aafbSBarry Smith /*MC 9411795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 942d382aafbSBarry Smith 943eca87e8dSBarry Smith Synopsis: 944aaa7dc30SBarry Smith #include <petscsys.h> 9451795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 946eca87e8dSBarry Smith 947eca87e8dSBarry Smith Not Collective 948eca87e8dSBarry Smith 949e28ce29aSPatrick Sanan Input Parameters: 950d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 951d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 952d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 953d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9541795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9551795a4d1SJed Brown 956e28ce29aSPatrick Sanan Output Parameters: 9571795a4d1SJed Brown + r1 - memory allocated in first chunk 9581795a4d1SJed Brown . r2 - memory allocated in second chunk 9591795a4d1SJed Brown . r3 - memory allocated in third chunk 9601795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9611795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9621795a4d1SJed Brown 9631795a4d1SJed Brown Level: developer 9641795a4d1SJed Brown 9651795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9661795a4d1SJed Brown 9671795a4d1SJed Brown M*/ 9682553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 969d382aafbSBarry Smith 970d382aafbSBarry Smith /*MC 971dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 972d382aafbSBarry Smith 973d382aafbSBarry Smith Synopsis: 974aaa7dc30SBarry Smith #include <petscsys.h> 975dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 976d382aafbSBarry Smith 977d382aafbSBarry Smith Not Collective 978d382aafbSBarry Smith 979e28ce29aSPatrick Sanan Input Parameters: 980d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 981d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 982d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 983d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 984d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 985dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 986d382aafbSBarry Smith 987e28ce29aSPatrick Sanan Output Parameteasr: 988d382aafbSBarry Smith + r1 - memory allocated in first chunk 989d382aafbSBarry Smith . r2 - memory allocated in second chunk 990d382aafbSBarry Smith . r3 - memory allocated in third chunk 991d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 992d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 993d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 994d382aafbSBarry Smith 995d382aafbSBarry Smith Level: developer 996d382aafbSBarry Smith 9971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 998d382aafbSBarry Smith 999d382aafbSBarry Smith M*/ 10002553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 1001d382aafbSBarry Smith 1002d382aafbSBarry Smith /*MC 10031795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 1004d382aafbSBarry Smith 1005eca87e8dSBarry Smith Synopsis: 1006aaa7dc30SBarry Smith #include <petscsys.h> 10071795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 1008eca87e8dSBarry Smith 1009eca87e8dSBarry Smith Not Collective 1010eca87e8dSBarry Smith 1011e28ce29aSPatrick Sanan Input Parameters: 1012d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1013d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1014d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1015d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1016d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 10171795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 10181795a4d1SJed Brown 1019e28ce29aSPatrick Sanan Output Parameters: 10201795a4d1SJed Brown + r1 - memory allocated in first chunk 10211795a4d1SJed Brown . r2 - memory allocated in second chunk 10221795a4d1SJed Brown . r3 - memory allocated in third chunk 10231795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10241795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10251795a4d1SJed Brown - r6 - memory allocated in sixth chunk 10261795a4d1SJed Brown 10271795a4d1SJed Brown Level: developer 10281795a4d1SJed Brown 10291795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 10301795a4d1SJed Brown 10311795a4d1SJed Brown M*/ 10322553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 10331795a4d1SJed Brown 10341795a4d1SJed Brown /*MC 1035dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 1036d382aafbSBarry Smith 1037d382aafbSBarry Smith Synopsis: 1038aaa7dc30SBarry Smith #include <petscsys.h> 1039dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1040d382aafbSBarry Smith 1041d382aafbSBarry Smith Not Collective 1042d382aafbSBarry Smith 1043e28ce29aSPatrick Sanan Input Parameters: 1044d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1045d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1046d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1047d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1048d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1049d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1050dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1051d382aafbSBarry Smith 1052e28ce29aSPatrick Sanan Output Parameters: 1053d382aafbSBarry Smith + r1 - memory allocated in first chunk 1054d382aafbSBarry Smith . r2 - memory allocated in second chunk 1055d382aafbSBarry Smith . r3 - memory allocated in third chunk 1056d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1057d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1058d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1059eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1060d382aafbSBarry Smith 1061d382aafbSBarry Smith Level: developer 1062d382aafbSBarry Smith 10631795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1064d382aafbSBarry Smith 1065d382aafbSBarry Smith M*/ 10662553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1067d382aafbSBarry Smith 1068d382aafbSBarry Smith /*MC 10691795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10701795a4d1SJed Brown 10711795a4d1SJed Brown Synopsis: 1072aaa7dc30SBarry Smith #include <petscsys.h> 10731795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10741795a4d1SJed Brown 10751795a4d1SJed Brown Not Collective 10761795a4d1SJed Brown 1077e28ce29aSPatrick Sanan Input Parameters: 10781795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10791795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10801795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10811795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10821795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10831795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10841795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10851795a4d1SJed Brown 1086e28ce29aSPatrick Sanan Output Parameters: 10871795a4d1SJed Brown + r1 - memory allocated in first chunk 10881795a4d1SJed Brown . r2 - memory allocated in second chunk 10891795a4d1SJed Brown . r3 - memory allocated in third chunk 10901795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10911795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10921795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10931795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10941795a4d1SJed Brown 10951795a4d1SJed Brown Level: developer 10961795a4d1SJed Brown 10971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10981795a4d1SJed Brown 10991795a4d1SJed Brown M*/ 11002553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 11011795a4d1SJed Brown 11021795a4d1SJed Brown /*MC 1103503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1104d382aafbSBarry Smith 1105eca87e8dSBarry Smith Synopsis: 1106aaa7dc30SBarry Smith #include <petscsys.h> 1107b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1108eca87e8dSBarry Smith 1109eca87e8dSBarry Smith Not Collective 1110eca87e8dSBarry Smith 1111d382aafbSBarry Smith Output Parameter: 1112b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1113d382aafbSBarry Smith 1114d382aafbSBarry Smith Level: beginner 1115d382aafbSBarry Smith 1116390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1117d382aafbSBarry Smith 1118d382aafbSBarry Smith M*/ 1119b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1120ad0619ddSBarry Smith 1121ad0619ddSBarry Smith /*MC 1122b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1123ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1124ad0619ddSBarry Smith 1125ad0619ddSBarry Smith Synopsis: 1126aaa7dc30SBarry Smith #include <petscsys.h> 1127b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1128ad0619ddSBarry Smith 1129ad0619ddSBarry Smith Not Collective 1130ad0619ddSBarry Smith 1131ad0619ddSBarry Smith Input Parameter: 1132b00a9115SJed Brown . obj - object memory is logged to 1133ad0619ddSBarry Smith 1134ad0619ddSBarry Smith Output Parameter: 1135b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1136ad0619ddSBarry Smith 1137ad0619ddSBarry Smith Level: developer 1138ad0619ddSBarry Smith 1139390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1140ad0619ddSBarry Smith 1141ad0619ddSBarry Smith M*/ 1142d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1143d382aafbSBarry Smith 1144d382aafbSBarry Smith /*MC 1145d382aafbSBarry Smith PetscFree - Frees memory 1146d382aafbSBarry Smith 1147eca87e8dSBarry Smith Synopsis: 1148aaa7dc30SBarry Smith #include <petscsys.h> 1149eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1150eca87e8dSBarry Smith 1151eca87e8dSBarry Smith Not Collective 1152eca87e8dSBarry Smith 1153d382aafbSBarry Smith Input Parameter: 11547f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1155d382aafbSBarry Smith 1156d382aafbSBarry Smith Level: beginner 1157d382aafbSBarry Smith 115849d7da52SJed Brown Notes: 1159390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1160390e1bf2SBarry Smith 116149d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1162d382aafbSBarry Smith 1163390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1164d382aafbSBarry Smith 1165d382aafbSBarry Smith M*/ 1166ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1167d382aafbSBarry Smith 1168d382aafbSBarry Smith /*MC 1169d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1170d382aafbSBarry Smith 1171eca87e8dSBarry Smith Synopsis: 1172aaa7dc30SBarry Smith #include <petscsys.h> 1173eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1174eca87e8dSBarry Smith 1175eca87e8dSBarry Smith Not Collective 1176eca87e8dSBarry Smith 1177e28ce29aSPatrick Sanan Input Parameters: 1178d382aafbSBarry Smith + memory1 - memory to free 1179d382aafbSBarry Smith - memory2 - 2nd memory to free 1180d382aafbSBarry Smith 1181d382aafbSBarry Smith Level: developer 1182d382aafbSBarry Smith 118395452b02SPatrick Sanan Notes: 118495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1185d382aafbSBarry Smith 1186d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1187d382aafbSBarry Smith 1188d382aafbSBarry Smith M*/ 1189ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1190d382aafbSBarry Smith 1191d382aafbSBarry Smith /*MC 1192d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1193d382aafbSBarry Smith 1194eca87e8dSBarry Smith Synopsis: 1195aaa7dc30SBarry Smith #include <petscsys.h> 1196eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1197eca87e8dSBarry Smith 1198eca87e8dSBarry Smith Not Collective 1199eca87e8dSBarry Smith 1200e28ce29aSPatrick Sanan Input Parameters: 1201d382aafbSBarry Smith + memory1 - memory to free 1202d382aafbSBarry Smith . memory2 - 2nd memory to free 1203d382aafbSBarry Smith - memory3 - 3rd memory to free 1204d382aafbSBarry Smith 1205d382aafbSBarry Smith Level: developer 1206d382aafbSBarry Smith 120795452b02SPatrick Sanan Notes: 120895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1209d382aafbSBarry Smith 1210d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1211d382aafbSBarry Smith 1212d382aafbSBarry Smith M*/ 1213ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1214d382aafbSBarry Smith 1215d382aafbSBarry Smith /*MC 1216d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1217d382aafbSBarry Smith 1218eca87e8dSBarry Smith Synopsis: 1219aaa7dc30SBarry Smith #include <petscsys.h> 1220eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1221eca87e8dSBarry Smith 1222eca87e8dSBarry Smith Not Collective 1223eca87e8dSBarry Smith 1224e28ce29aSPatrick Sanan Input Parameters: 1225d382aafbSBarry Smith + m1 - memory to free 1226d382aafbSBarry Smith . m2 - 2nd memory to free 1227d382aafbSBarry Smith . m3 - 3rd memory to free 1228d382aafbSBarry Smith - m4 - 4th memory to free 1229d382aafbSBarry Smith 1230d382aafbSBarry Smith Level: developer 1231d382aafbSBarry Smith 123295452b02SPatrick Sanan Notes: 123395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1234d382aafbSBarry Smith 1235d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1236d382aafbSBarry Smith 1237d382aafbSBarry Smith M*/ 1238ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1239d382aafbSBarry Smith 1240d382aafbSBarry Smith /*MC 1241d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1242d382aafbSBarry Smith 1243eca87e8dSBarry Smith Synopsis: 1244aaa7dc30SBarry Smith #include <petscsys.h> 1245eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1246eca87e8dSBarry Smith 1247eca87e8dSBarry Smith Not Collective 1248eca87e8dSBarry Smith 1249e28ce29aSPatrick Sanan Input Parameters: 1250d382aafbSBarry Smith + m1 - memory to free 1251d382aafbSBarry Smith . m2 - 2nd memory to free 1252d382aafbSBarry Smith . m3 - 3rd memory to free 1253d382aafbSBarry Smith . m4 - 4th memory to free 1254d382aafbSBarry Smith - m5 - 5th memory to free 1255d382aafbSBarry Smith 1256d382aafbSBarry Smith Level: developer 1257d382aafbSBarry Smith 125895452b02SPatrick Sanan Notes: 125995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1260d382aafbSBarry Smith 1261d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1262d382aafbSBarry Smith 1263d382aafbSBarry Smith M*/ 1264ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1265d382aafbSBarry Smith 1266d382aafbSBarry Smith /*MC 1267d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1268d382aafbSBarry Smith 1269eca87e8dSBarry Smith Synopsis: 1270aaa7dc30SBarry Smith #include <petscsys.h> 1271eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1272eca87e8dSBarry Smith 1273eca87e8dSBarry Smith Not Collective 1274eca87e8dSBarry Smith 1275e28ce29aSPatrick Sanan Input Parameters: 1276d382aafbSBarry Smith + m1 - memory to free 1277d382aafbSBarry Smith . m2 - 2nd memory to free 1278d382aafbSBarry Smith . m3 - 3rd memory to free 1279d382aafbSBarry Smith . m4 - 4th memory to free 1280d382aafbSBarry Smith . m5 - 5th memory to free 1281d382aafbSBarry Smith - m6 - 6th memory to free 1282d382aafbSBarry Smith 1283d382aafbSBarry Smith Level: developer 1284d382aafbSBarry Smith 128595452b02SPatrick Sanan Notes: 128695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1287d382aafbSBarry Smith 1288d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1289d382aafbSBarry Smith 1290d382aafbSBarry Smith M*/ 1291ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1292d382aafbSBarry Smith 1293d382aafbSBarry Smith /*MC 1294d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1295d382aafbSBarry Smith 1296eca87e8dSBarry Smith Synopsis: 1297aaa7dc30SBarry Smith #include <petscsys.h> 1298eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1299eca87e8dSBarry Smith 1300eca87e8dSBarry Smith Not Collective 1301eca87e8dSBarry Smith 1302e28ce29aSPatrick Sanan Input Parameters: 1303d382aafbSBarry Smith + m1 - memory to free 1304d382aafbSBarry Smith . m2 - 2nd memory to free 1305d382aafbSBarry Smith . m3 - 3rd memory to free 1306d382aafbSBarry Smith . m4 - 4th memory to free 1307d382aafbSBarry Smith . m5 - 5th memory to free 1308d382aafbSBarry Smith . m6 - 6th memory to free 1309d382aafbSBarry Smith - m7 - 7th memory to free 1310d382aafbSBarry Smith 1311d382aafbSBarry Smith Level: developer 1312d382aafbSBarry Smith 131395452b02SPatrick Sanan Notes: 131495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1315d382aafbSBarry Smith 1316d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1317d382aafbSBarry Smith PetscMalloc7() 1318d382aafbSBarry Smith 1319d382aafbSBarry Smith M*/ 1320ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1321d382aafbSBarry Smith 1322ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1323ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1324071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1325efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 13263221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1327ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 132892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1330d382aafbSBarry Smith 1331d382aafbSBarry Smith /* 1332c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1333c1706be6SHong Zhang */ 1334c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1335c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 133631f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 133731f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 133831f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 133931f06eaaSHong Zhang #endif 134059af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 134159af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 134259af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 134359af0bd3SScott Kruger #endif 134459af0bd3SScott Kruger 1345a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 134636763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1347a5057860SBarry Smith 1348a5057860SBarry Smith /* 134966d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1350d382aafbSBarry Smith */ 1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 135292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1355e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1356e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 135792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 135892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1359efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 136092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 136192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1362608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1363608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1364d382aafbSBarry Smith 13656a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13698e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1370d382aafbSBarry Smith 1371d382aafbSBarry Smith /* 1372d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1373d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1374d382aafbSBarry Smith functionality and/or error checking. 1375d382aafbSBarry Smith */ 1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1378d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1386a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13902f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13952c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 139847340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13996fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 14006991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 14016991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1403d382aafbSBarry Smith 1404573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1405573b0fb4SBarry Smith 1406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1409d382aafbSBarry Smith 1410e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1411a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1412a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1413a53986e1SJed Brown 1414d382aafbSBarry Smith /* 1415d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1416d382aafbSBarry Smith */ 1417367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1418570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1419de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1420014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1421014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1422d9822059SBarry Smith #else 1423de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1424d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1425d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1426d9822059SBarry Smith #endif 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1428d382aafbSBarry Smith 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1431eb3f98d2SBarry Smith 143295c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1433d6a4318aSJed Brown 1434639ff905SBarry Smith /* 1435639ff905SBarry Smith Defines PETSc error handling. 1436639ff905SBarry Smith */ 1437639ff905SBarry Smith #include <petscerror.h> 1438d382aafbSBarry Smith 14390700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1440014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1441014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 144381256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 144481256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 144581256985SMatthew G. Knepley 1446d382aafbSBarry Smith /* 1447d382aafbSBarry Smith Routines that get memory usage information from the OS 1448d382aafbSBarry Smith */ 1449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1452b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1453d382aafbSBarry Smith 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1455d382aafbSBarry Smith 1456d382aafbSBarry Smith /* 1457d382aafbSBarry Smith Initialization of PETSc 1458d382aafbSBarry Smith */ 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1469d382aafbSBarry Smith 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1471607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1472d382aafbSBarry Smith 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1477d382aafbSBarry Smith 1478a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1479a50e088cSMatthew G. Knepley 1480d382aafbSBarry Smith /* 1481d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14822981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1483d382aafbSBarry Smith */ 1484638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1485638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1486638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1487d382aafbSBarry Smith 1488d382aafbSBarry Smith /* 1489d382aafbSBarry Smith Functions that can act on any PETSc object. 1490d382aafbSBarry Smith */ 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1509bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1510bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 15130eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 15140eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1516d382aafbSBarry Smith 1517665c2dedSJed Brown #include <petscviewertypes.h> 1518639ff905SBarry Smith #include <petscoptions.h> 1519639ff905SBarry Smith 1520608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1521608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1522608c71bfSMatthew G. Knepley 15230633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 15240633abcbSJed Brown 1525c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1526dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1527639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 15280005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 15290005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1537685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15404099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1542b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1545d382aafbSBarry Smith 1546e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15477aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1548e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1549e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1550e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1551e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1552e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1553e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1554e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1555e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1556e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 155715681b3cSBarry Smith 1558ec7429eaSBarry Smith #else 15597aab2a10SBarry Smith #define PetscSAWsBlock() 0 1560e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1561e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1562e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1563e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1564e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1565e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1566e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1567e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1568e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 156915681b3cSBarry Smith 1570ec7429eaSBarry Smith #endif 1571b90c6cbeSBarry Smith 157282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 157382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 157482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1575258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1576258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1577258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1578258ec3d2SMatthew G. Knepley #endif 15797d5d4d99SBarry Smith 15805fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1581a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15825fe58b6fSBarry Smith #endif 15837eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1584a64a8e02SBarry Smith 1585140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1586140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1587140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1588140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1589140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1590140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1591d382aafbSBarry Smith 1592d382aafbSBarry Smith /* 1593503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1594d382aafbSBarry Smith link libraries that will be loaded as needed. 1595d382aafbSBarry Smith */ 1596a240a19fSJed Brown 1597a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1598a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1599140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 16001c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 16011c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 160244ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1603140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1604140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1605140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1606d382aafbSBarry Smith 1607014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1615d382aafbSBarry Smith 1616d382aafbSBarry Smith /* 1617d382aafbSBarry Smith Useful utility routines 1618d382aafbSBarry Smith */ 1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1621d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1626dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[2],PetscInt[2]); 1627dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[2],PetscReal[2]); 1628d382aafbSBarry Smith 162964ac3b0dSPatrick Sanan /*MC 1630ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1631503cfb0cSBarry Smith 1632e28ce29aSPatrick Sanan Notes: 1633e28ce29aSPatrick Sanan This is useful in cases like 1634503cfb0cSBarry Smith $ int *a; 1635ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 16361cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 163764ac3b0dSPatrick Sanan 163864ac3b0dSPatrick Sanan Level: beginner 163964ac3b0dSPatrick Sanan 164064ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 164164ac3b0dSPatrick Sanan M*/ 1642d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1643503cfb0cSBarry Smith 1644d382aafbSBarry Smith /*MC 1645d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1646d382aafbSBarry Smith 1647d382aafbSBarry Smith Synopsis: 1648aaa7dc30SBarry Smith #include <petscsys.h> 1649659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1650d382aafbSBarry Smith 1651659f7ba0SBarry Smith Collective on comm 1652eca87e8dSBarry Smith 1653d382aafbSBarry Smith Input Parameters: 1654659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1655d382aafbSBarry Smith . format - the usual printf() format string 1656659f7ba0SBarry Smith - args - arguments to be printed 1657d382aafbSBarry Smith 1658d382aafbSBarry Smith Level: developer 1659d382aafbSBarry Smith 1660d382aafbSBarry Smith Fortran Note: 1661d382aafbSBarry Smith This routine is not supported in Fortran. 1662d382aafbSBarry Smith 1663659f7ba0SBarry Smith Note: 1664659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1665659f7ba0SBarry Smith 1666659f7ba0SBarry Smith To use, write your own function, for example, 1667659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1668659f7ba0SBarry Smith ${ 1669659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1670659f7ba0SBarry Smith $} 1671659f7ba0SBarry Smith then do the assigment 1672659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1673659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1674659f7ba0SBarry Smith 1675659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1676d382aafbSBarry Smith 1677d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1678d382aafbSBarry Smith M*/ 1679014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1680d382aafbSBarry Smith 1681fcfd50ebSBarry Smith /* 1682fcfd50ebSBarry Smith Defines PETSc profiling. 1683fcfd50ebSBarry Smith */ 16842c8e378dSBarry Smith #include <petsclog.h> 1685fcfd50ebSBarry Smith 1686fcfd50ebSBarry Smith /* 1687fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1688fcfd50ebSBarry Smith */ 1689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1693014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1694014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1695014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16961b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1697fcfd50ebSBarry Smith 1698014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1699014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1700014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1701d382aafbSBarry Smith 1702d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1703d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1704d781fa04SBarry Smith 1705d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1706014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1707016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 170874ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1709d382aafbSBarry Smith #endif 1710d382aafbSBarry Smith 1711014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1712014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 17130ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1714014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1715014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1716014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1717014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1718d382aafbSBarry Smith 1719014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1720014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1721014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1722014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1723014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1724014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1725b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1726d382aafbSBarry Smith 1727d382aafbSBarry Smith /* 1728d382aafbSBarry Smith For use in debuggers 1729d382aafbSBarry Smith */ 1730014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1731014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1732014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1733014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1734014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1735d382aafbSBarry Smith 1736a663daf8SBarry Smith #include <stddef.h> 1737a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1738d382aafbSBarry Smith #include <stdlib.h> 17396c7e564aSBarry Smith 17404a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1741d382aafbSBarry Smith #include <xmmintrin.h> 1742d382aafbSBarry Smith #endif 1743d382aafbSBarry Smith 1744d382aafbSBarry Smith /*@C 1745580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1746580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1747580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1748580bdb30SBarry Smith 1749580bdb30SBarry Smith Not Collective 1750580bdb30SBarry Smith 1751580bdb30SBarry Smith Input Parameters: 1752580bdb30SBarry Smith + b - pointer to initial memory space 1753580bdb30SBarry Smith . a - pointer to copy space 1754580bdb30SBarry Smith - n - length (in bytes) of space to copy 1755580bdb30SBarry Smith 1756580bdb30SBarry Smith Level: intermediate 1757580bdb30SBarry Smith 1758580bdb30SBarry Smith Note: 1759857a15f1SBarry Smith PetscArraymove() is preferred 1760580bdb30SBarry Smith This routine is analogous to memmove(). 1761580bdb30SBarry Smith 1762580bdb30SBarry Smith Developers Note: This is inlined for performance 1763580bdb30SBarry Smith 1764580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1765580bdb30SBarry Smith PetscArraymove() 1766580bdb30SBarry Smith @*/ 1767580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1768580bdb30SBarry Smith { 1769580bdb30SBarry Smith PetscFunctionBegin; 1770580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1771580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1772580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1773580bdb30SBarry Smith if (a < b) { 1774580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1775580bdb30SBarry Smith else { 1776580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1777580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1778580bdb30SBarry Smith } 1779580bdb30SBarry Smith } else { 1780580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1781580bdb30SBarry Smith else { 1782580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1783580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1784580bdb30SBarry Smith } 1785580bdb30SBarry Smith } 1786580bdb30SBarry Smith #else 1787580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1788580bdb30SBarry Smith #endif 1789580bdb30SBarry Smith PetscFunctionReturn(0); 1790580bdb30SBarry Smith } 1791580bdb30SBarry Smith 1792d382aafbSBarry Smith /*@C 1793d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1794d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1795d382aafbSBarry Smith PetscMemmove() in that case. 1796d382aafbSBarry Smith 1797d382aafbSBarry Smith Not Collective 1798d382aafbSBarry Smith 1799d382aafbSBarry Smith Input Parameters: 1800d382aafbSBarry Smith + b - pointer to initial memory space 1801d382aafbSBarry Smith - n - length (in bytes) of space to copy 1802d382aafbSBarry Smith 1803d382aafbSBarry Smith Output Parameter: 1804d382aafbSBarry Smith . a - pointer to copy space 1805d382aafbSBarry Smith 1806d382aafbSBarry Smith Level: intermediate 1807d382aafbSBarry Smith 1808d382aafbSBarry Smith Compile Option: 1809d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1810d382aafbSBarry Smith for memory copies on double precision values. 1811d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1812d382aafbSBarry Smith for memory copies on double precision values. 1813d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1814d382aafbSBarry Smith for memory copies on double precision values. 1815d382aafbSBarry Smith 1816d382aafbSBarry Smith Note: 1817580bdb30SBarry Smith Prefer PetscArraycpy() 1818d382aafbSBarry Smith This routine is analogous to memcpy(). 18191fd49c25SBarry Smith Not available from Fortran 18201fd49c25SBarry Smith 1821f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1822f5f57ec0SBarry Smith 1823580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1824d382aafbSBarry Smith 1825d382aafbSBarry Smith @*/ 18267087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1827d382aafbSBarry Smith { 1828d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1829c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1830c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1831a7e36092SMatthew G Knepley PetscFunctionBegin; 1832e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1833e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1834a7e36092SMatthew G Knepley #else 1835d382aafbSBarry Smith PetscFunctionBegin; 1836a7e36092SMatthew G Knepley #endif 1837a47a537aSLisandro Dalcin if (a != b && n > 0) { 1838d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1839e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1840d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1841d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1842d382aafbSBarry Smith #endif 1843d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1844c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1845d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1846d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1847c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1848c5df96a5SBarry Smith PetscErrorCode ierr; 1849c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18508b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1851d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1852d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1853d382aafbSBarry Smith #else 1854d382aafbSBarry Smith size_t i; 1855d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1856d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1857d382aafbSBarry Smith #endif 1858d382aafbSBarry Smith } else { 1859d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1860d382aafbSBarry Smith } 1861d382aafbSBarry Smith #else 1862d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1863d382aafbSBarry Smith #endif 1864d382aafbSBarry Smith } 1865d382aafbSBarry Smith PetscFunctionReturn(0); 1866d382aafbSBarry Smith } 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith /*@C 1869d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1870d382aafbSBarry Smith 1871d382aafbSBarry Smith Not Collective 1872d382aafbSBarry Smith 1873d382aafbSBarry Smith Input Parameters: 1874d382aafbSBarry Smith + a - pointer to beginning memory location 1875d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1876d382aafbSBarry Smith 1877d382aafbSBarry Smith Level: intermediate 1878d382aafbSBarry Smith 1879d382aafbSBarry Smith Compile Option: 1880d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1881d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1882d382aafbSBarry Smith 18831fd49c25SBarry Smith Not available from Fortran 1884857a15f1SBarry Smith Prefer PetscArrayzero() 18851fd49c25SBarry Smith 1886503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1887503cfb0cSBarry Smith 1888580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1889d382aafbSBarry Smith @*/ 18907087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1891d382aafbSBarry Smith { 1892d382aafbSBarry Smith if (n > 0) { 1893d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 189418703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1895d382aafbSBarry Smith #endif 1896d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1897d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1898d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1899d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1900d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1901d382aafbSBarry Smith } else { 1902d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1903d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1904d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1905d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1906d382aafbSBarry Smith } else { 1907d382aafbSBarry Smith #endif 1908d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1909d382aafbSBarry Smith bzero((char *)a,n); 1910d382aafbSBarry Smith #else 1911d382aafbSBarry Smith memset((char*)a,0,n); 1912d382aafbSBarry Smith #endif 1913d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1914d382aafbSBarry Smith } 1915d382aafbSBarry Smith #endif 1916d382aafbSBarry Smith } 1917d382aafbSBarry Smith return 0; 1918d382aafbSBarry Smith } 1919d382aafbSBarry Smith 1920d382aafbSBarry Smith /*MC 1921580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1922580bdb30SBarry Smith 1923580bdb30SBarry Smith Synopsis: 1924580bdb30SBarry Smith #include <petscsys.h> 1925580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1926580bdb30SBarry Smith 1927580bdb30SBarry Smith Not Collective 1928580bdb30SBarry Smith 1929580bdb30SBarry Smith Input Parameters: 1930580bdb30SBarry Smith + str1 - First array 1931580bdb30SBarry Smith . str2 - Second array 1932580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1933580bdb30SBarry Smith 1934580bdb30SBarry Smith Output Parameters: 1935580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1936580bdb30SBarry Smith 1937580bdb30SBarry Smith Level: intermediate 1938580bdb30SBarry Smith 1939580bdb30SBarry Smith Note: 1940857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1941580bdb30SBarry Smith The arrays must be of the same type 1942580bdb30SBarry Smith 1943580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1944580bdb30SBarry Smith PetscArraymove() 1945580bdb30SBarry Smith M*/ 19469e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1947580bdb30SBarry Smith 19488f8f2f0dSBarry Smith /*MC 1949580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1950580bdb30SBarry Smith do not overlap 1951580bdb30SBarry Smith 1952580bdb30SBarry Smith Synopsis: 1953580bdb30SBarry Smith #include <petscsys.h> 1954580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1955580bdb30SBarry Smith 1956580bdb30SBarry Smith Not Collective 1957580bdb30SBarry Smith 1958580bdb30SBarry Smith Input Parameters: 1959580bdb30SBarry Smith + str1 - First array 1960580bdb30SBarry Smith . str2 - Second array 1961580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1962580bdb30SBarry Smith 1963580bdb30SBarry Smith Level: intermediate 1964580bdb30SBarry Smith 1965580bdb30SBarry Smith Note: 1966857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1967580bdb30SBarry Smith The arrays must be of the same type 1968580bdb30SBarry Smith 1969580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1970580bdb30SBarry Smith M*/ 19719e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1972580bdb30SBarry Smith 19738f8f2f0dSBarry Smith /*MC 1974580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1975580bdb30SBarry Smith 1976580bdb30SBarry Smith Synopsis: 1977580bdb30SBarry Smith #include <petscsys.h> 1978580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1979580bdb30SBarry Smith 1980580bdb30SBarry Smith Not Collective 1981580bdb30SBarry Smith 1982580bdb30SBarry Smith Input Parameters: 1983de25709eSStefano Zampini + str1 - First array (destination) 1984de25709eSStefano Zampini . str2 - Second array (source) 1985580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1986580bdb30SBarry Smith 1987580bdb30SBarry Smith Level: intermediate 1988580bdb30SBarry Smith 1989580bdb30SBarry Smith Note: 1990857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1991580bdb30SBarry Smith The arrays must be of the same type 1992580bdb30SBarry Smith 1993580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1994580bdb30SBarry Smith M*/ 19959e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1996580bdb30SBarry Smith 19978f8f2f0dSBarry Smith /*MC 1998580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1999580bdb30SBarry Smith 2000580bdb30SBarry Smith Synopsis: 2001580bdb30SBarry Smith #include <petscsys.h> 2002580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 2003580bdb30SBarry Smith 2004580bdb30SBarry Smith Not Collective 2005580bdb30SBarry Smith 2006580bdb30SBarry Smith Input Parameters: 2007580bdb30SBarry Smith + str1 - array 2008580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 2009580bdb30SBarry Smith 2010580bdb30SBarry Smith Level: intermediate 2011580bdb30SBarry Smith 2012580bdb30SBarry Smith Note: 2013857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 2014580bdb30SBarry Smith 2015580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 2016580bdb30SBarry Smith M*/ 20179e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 2018580bdb30SBarry Smith 2019d382aafbSBarry Smith /*MC 2020d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 2021d382aafbSBarry Smith 2022eca87e8dSBarry Smith Synopsis: 2023aaa7dc30SBarry Smith #include <petscsys.h> 2024eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 2025eca87e8dSBarry Smith 2026d382aafbSBarry Smith Not Collective 2027d382aafbSBarry Smith 2028d382aafbSBarry Smith Input Parameters: 2029d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 2030d382aafbSBarry Smith . n - number of elements to fetch 2031d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 203250d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2033d382aafbSBarry Smith 2034d382aafbSBarry Smith Level: developer 2035d382aafbSBarry Smith 2036d382aafbSBarry Smith Notes: 2037d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2038d382aafbSBarry Smith 203950d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 204050d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 204150d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 204263cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 204363cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 204463cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2045d382aafbSBarry Smith 2046d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2047d382aafbSBarry Smith address). 2048d382aafbSBarry Smith 2049d382aafbSBarry Smith M*/ 2050d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2051d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2052d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2053d382aafbSBarry Smith } while (0) 2054d382aafbSBarry Smith 2055d382aafbSBarry Smith /* 2056d382aafbSBarry Smith Determine if some of the kernel computation routines use 2057d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2058d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2059d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2060e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2061d382aafbSBarry Smith */ 2062d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2063d382aafbSBarry Smith 2064d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2065d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2066d382aafbSBarry Smith #endif 2067d382aafbSBarry Smith 20685a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20695a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2070d382aafbSBarry Smith #endif 2071d382aafbSBarry Smith 2072d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2073d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2074d382aafbSBarry Smith #endif 2075d382aafbSBarry Smith 2076d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2077d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2078d382aafbSBarry Smith #endif 2079d382aafbSBarry Smith 2080d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2081d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2082d382aafbSBarry Smith #endif 2083d382aafbSBarry Smith 2084d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2085d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2086d382aafbSBarry Smith #endif 2087d382aafbSBarry Smith 2088d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2089d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2090d382aafbSBarry Smith #endif 2091d382aafbSBarry Smith 2092d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2093d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2094d382aafbSBarry Smith #endif 2095d382aafbSBarry Smith 2096d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2097d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2098d382aafbSBarry Smith #endif 2099d382aafbSBarry Smith 2100d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2101d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2102d382aafbSBarry Smith #endif 2103d382aafbSBarry Smith 2104d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2105d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2106d382aafbSBarry Smith #endif 2107d382aafbSBarry Smith 2108d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2109d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2110d382aafbSBarry Smith #endif 2111d382aafbSBarry Smith 2112d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2113d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2114d382aafbSBarry Smith #endif 2115d382aafbSBarry Smith 2116d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2117d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2118d382aafbSBarry Smith #endif 2119d382aafbSBarry Smith 2120d382aafbSBarry Smith #endif 2121d382aafbSBarry Smith 2122d382aafbSBarry Smith /* 2123d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2124d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2125d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2126d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2127d382aafbSBarry Smith ugly extern "C" {} wrappers. 2128d382aafbSBarry Smith */ 2129d382aafbSBarry Smith #if defined(__cplusplus) 2130d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2131d382aafbSBarry Smith # define EXTERN_C_END } 2132d382aafbSBarry Smith #else 2133d382aafbSBarry Smith # define EXTERN_C_BEGIN 2134d382aafbSBarry Smith # define EXTERN_C_END 2135d382aafbSBarry Smith #endif 2136d382aafbSBarry Smith 2137d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2138d382aafbSBarry Smith 2139d382aafbSBarry Smith /*MC 2140d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2141d382aafbSBarry Smith communication 2142d382aafbSBarry Smith 2143d382aafbSBarry Smith Level: beginner 2144d382aafbSBarry Smith 2145d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2146d382aafbSBarry Smith 2147d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2148d382aafbSBarry Smith M*/ 2149d382aafbSBarry Smith 2150d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2151014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2152014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2153c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2154c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2155c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2156c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2157d382aafbSBarry Smith #endif 2158d382aafbSBarry Smith 2159d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2160d382aafbSBarry Smith 2161d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2162d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2163d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2164d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2165d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2166d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2167eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 2168d382aafbSBarry Smith 216961b0d812SBarry Smith /*@C 2170c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2171c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2172c73702f5SBarry Smith 2173c73702f5SBarry Smith Not Collective 2174c73702f5SBarry Smith 2175c73702f5SBarry Smith Input Parameter: 2176c73702f5SBarry Smith . a - the PetscInt64 value 2177c73702f5SBarry Smith 2178c73702f5SBarry Smith Output Parameter: 2179c73702f5SBarry Smith . b - the resulting PetscInt value 2180c73702f5SBarry Smith 2181c73702f5SBarry Smith Level: advanced 2182c73702f5SBarry Smith 2183c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2184c73702f5SBarry Smith 2185c73702f5SBarry Smith Not available from Fortran 2186c73702f5SBarry Smith 218761778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2188c73702f5SBarry Smith @*/ 2189c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2190c73702f5SBarry Smith { 2191c73702f5SBarry Smith PetscFunctionBegin; 2192c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2193e9e21dffSJose E. Roman if (a > PETSC_MAX_INT) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); } 2194c73702f5SBarry Smith #endif 2195c73702f5SBarry Smith *b = (PetscInt)(a); 2196c73702f5SBarry Smith PetscFunctionReturn(0); 2197c73702f5SBarry Smith } 2198c73702f5SBarry Smith 2199c73702f5SBarry Smith /*@C 220061b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 220161b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 220261b0d812SBarry Smith 220361b0d812SBarry Smith Not Collective 220461b0d812SBarry Smith 220561b0d812SBarry Smith Input Parameter: 220661b0d812SBarry Smith . a - the PetscInt value 220761b0d812SBarry Smith 220861b0d812SBarry Smith Output Parameter: 220961b0d812SBarry Smith . b - the resulting PetscBLASInt value 221061b0d812SBarry Smith 221161b0d812SBarry Smith Level: advanced 221261b0d812SBarry Smith 22130bc7d38cSBarry Smith Notes: 22141fd49c25SBarry Smith Not available from Fortran 2215f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 22161fd49c25SBarry Smith 2217c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 221861b0d812SBarry Smith @*/ 2219c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2220c5df96a5SBarry Smith { 2221c5df96a5SBarry Smith PetscFunctionBegin; 2222c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2223e9e21dffSJose E. Roman if (a > PETSC_BLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running",a); } 2224c5df96a5SBarry Smith #endif 2225e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); } 2226c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2227c5df96a5SBarry Smith PetscFunctionReturn(0); 2228c5df96a5SBarry Smith } 2229c5df96a5SBarry Smith 223061b0d812SBarry Smith /*@C 2231eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2232eee0c0a6SToby Isaac 2233eee0c0a6SToby Isaac Not Collective 2234eee0c0a6SToby Isaac 2235eee0c0a6SToby Isaac Input Parameter: 2236eee0c0a6SToby Isaac . a - the PetscInt value 2237eee0c0a6SToby Isaac 2238eee0c0a6SToby Isaac Output Parameter: 2239eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2240eee0c0a6SToby Isaac 2241eee0c0a6SToby Isaac Level: advanced 2242eee0c0a6SToby Isaac 2243eee0c0a6SToby Isaac Notes: 2244eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2245eee0c0a6SToby Isaac 2246eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2247eee0c0a6SToby Isaac @*/ 2248eee0c0a6SToby Isaac PETSC_STATIC_INLINE PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscBLASInt *b) 2249eee0c0a6SToby Isaac { 2250eee0c0a6SToby Isaac PetscFunctionBegin; 2251eee0c0a6SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 2252e9e21dffSJose E. Roman if (a > PETSC_CUBLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for cuBLAS, which is restricted to 32 bit integers.",a); } 2253eee0c0a6SToby Isaac #endif 2254e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); } 2255eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2256eee0c0a6SToby Isaac PetscFunctionReturn(0); 2257eee0c0a6SToby Isaac } 2258eee0c0a6SToby Isaac 2259eee0c0a6SToby Isaac /*@C 226061b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 226161b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 226261b0d812SBarry Smith 226361b0d812SBarry Smith Not Collective 226461b0d812SBarry Smith 226561b0d812SBarry Smith Input Parameter: 226661b0d812SBarry Smith . a - the PetscInt value 226761b0d812SBarry Smith 226861b0d812SBarry Smith Output Parameter: 226961b0d812SBarry Smith . b - the resulting PetscMPIInt value 227061b0d812SBarry Smith 227161b0d812SBarry Smith Level: advanced 227261b0d812SBarry Smith 22731fd49c25SBarry Smith Not available from Fortran 22741fd49c25SBarry Smith 2275c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 227661b0d812SBarry Smith @*/ 22774dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22784dc2109aSBarry Smith { 22794dc2109aSBarry Smith PetscFunctionBegin; 22804dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2281e9e21dffSJose E. Roman if (a > PETSC_MPI_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for MPI buffer length. We currently only support 32 bit integers",a); } 22824dc2109aSBarry Smith #endif 2283c73702f5SBarry Smith *b = (PetscMPIInt)(a); 22844dc2109aSBarry Smith PetscFunctionReturn(0); 22854dc2109aSBarry Smith } 22864dc2109aSBarry Smith 2287bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 22882f18eb33SBarry Smith 22892f18eb33SBarry Smith /*@C 22902f18eb33SBarry Smith 22912f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22922f18eb33SBarry Smith 22932f18eb33SBarry Smith Not Collective 22942f18eb33SBarry Smith 2295d8d19677SJose E. Roman Input Parameters: 22962f18eb33SBarry Smith + a - the PetscReal value 22972f18eb33SBarry Smith - b - the second value 22982f18eb33SBarry Smith 2299390e1bf2SBarry Smith Returns: 2300390e1bf2SBarry Smith the result as a PetscInt value 23012f18eb33SBarry Smith 2302bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23032f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 23042f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23052f18eb33SBarry Smith 2306e28ce29aSPatrick Sanan Developers Note: 2307e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23082f18eb33SBarry Smith 23092f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23102f18eb33SBarry Smith 23111fd49c25SBarry Smith Not available from Fortran 23121fd49c25SBarry Smith 23132f18eb33SBarry Smith Level: advanced 23142f18eb33SBarry Smith 231561778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23162f18eb33SBarry Smith @*/ 23172f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 23182f18eb33SBarry Smith { 2319bafee8b4SSatish Balay PetscInt64 r; 23202f18eb33SBarry Smith 2321bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 23222f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23232f18eb33SBarry Smith return (PetscInt) r; 23242f18eb33SBarry Smith } 23252f18eb33SBarry Smith 23262f18eb33SBarry Smith /*@C 23272f18eb33SBarry Smith 23282f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23292f18eb33SBarry Smith 23302f18eb33SBarry Smith Not Collective 23312f18eb33SBarry Smith 2332d8d19677SJose E. Roman Input Parameters: 23332f18eb33SBarry Smith + a - the PetscInt value 23342f18eb33SBarry Smith - b - the second value 23352f18eb33SBarry Smith 2336390e1bf2SBarry Smith Returns: 2337390e1bf2SBarry Smith the result as a PetscInt value 23382f18eb33SBarry Smith 2339bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23402f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23412f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23422f18eb33SBarry Smith 23431fd49c25SBarry Smith Not available from Fortran 23441fd49c25SBarry Smith 23452f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23462f18eb33SBarry Smith 23472f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23482f18eb33SBarry Smith 23492f18eb33SBarry Smith Level: advanced 23502f18eb33SBarry Smith 235161778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23522f18eb33SBarry Smith @*/ 23532f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23542f18eb33SBarry Smith { 2355bafee8b4SSatish Balay PetscInt64 r; 23562f18eb33SBarry Smith 2357bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23582f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23592f18eb33SBarry Smith return (PetscInt) r; 23602f18eb33SBarry Smith } 23612f18eb33SBarry Smith 2362f91af8c7SBarry Smith /*@C 2363f91af8c7SBarry Smith 2364f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2365f91af8c7SBarry Smith 2366f91af8c7SBarry Smith Not Collective 2367f91af8c7SBarry Smith 2368d8d19677SJose E. Roman Input Parameters: 2369f91af8c7SBarry Smith + a - the PetscInt value 2370f91af8c7SBarry Smith - b - the second value 2371f91af8c7SBarry Smith 2372390e1bf2SBarry Smith Returns: 2373390e1bf2SBarry Smith the result as a PetscInt value 2374f91af8c7SBarry Smith 2375bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2376f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2377f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2378f91af8c7SBarry Smith 2379f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2380f91af8c7SBarry Smith 2381f5f57ec0SBarry Smith Not available from Fortran 2382f5f57ec0SBarry Smith 2383f91af8c7SBarry Smith Level: advanced 2384f91af8c7SBarry Smith 238561778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2386f91af8c7SBarry Smith @*/ 2387f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2388f91af8c7SBarry Smith { 2389bafee8b4SSatish Balay PetscInt64 r; 2390f91af8c7SBarry Smith 2391bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2392f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2393f91af8c7SBarry Smith return (PetscInt) r; 2394f91af8c7SBarry Smith } 2395f91af8c7SBarry Smith 23962f18eb33SBarry Smith /*@C 23972f18eb33SBarry Smith 23982f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23992f18eb33SBarry Smith 24002f18eb33SBarry Smith Not Collective 24012f18eb33SBarry Smith 2402d8d19677SJose E. Roman Input Parameters: 24032f18eb33SBarry Smith + a - the PetscInt value 24042f18eb33SBarry Smith - b - the second value 24052f18eb33SBarry Smith 2406d8d19677SJose E. Roman Output Parameter: 2407390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 24082f18eb33SBarry Smith 2409bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 24102f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 24112f18eb33SBarry Smith 2412f5f57ec0SBarry Smith Not available from Fortran 2413f5f57ec0SBarry Smith 2414220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 24152f18eb33SBarry Smith 24162f18eb33SBarry Smith Level: advanced 24172f18eb33SBarry Smith 2418220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 24192f18eb33SBarry Smith @*/ 24202f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 24212f18eb33SBarry Smith { 2422bafee8b4SSatish Balay PetscInt64 r; 24232f18eb33SBarry Smith 24242f18eb33SBarry Smith PetscFunctionBegin; 2425bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 24262f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 242761778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 24282f18eb33SBarry Smith #endif 2429f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2430f91af8c7SBarry Smith PetscFunctionReturn(0); 2431f91af8c7SBarry Smith } 2432f91af8c7SBarry Smith 2433f91af8c7SBarry Smith /*@C 2434f91af8c7SBarry Smith 2435fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2436f91af8c7SBarry Smith 2437f91af8c7SBarry Smith Not Collective 2438f91af8c7SBarry Smith 2439d8d19677SJose E. Roman Input Parameters: 2440f91af8c7SBarry Smith + a - the PetscInt value 2441f91af8c7SBarry Smith - b - the second value 2442f91af8c7SBarry Smith 2443d8d19677SJose E. Roman Output Parameter: 2444390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2445f91af8c7SBarry Smith 2446bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2447f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2448f91af8c7SBarry Smith 2449f5f57ec0SBarry Smith Not available from Fortran 2450f5f57ec0SBarry Smith 2451f91af8c7SBarry Smith Level: advanced 2452f91af8c7SBarry Smith 245361778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2454f91af8c7SBarry Smith @*/ 2455f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2456f91af8c7SBarry Smith { 2457bafee8b4SSatish Balay PetscInt64 r; 2458f91af8c7SBarry Smith 2459f91af8c7SBarry Smith PetscFunctionBegin; 2460bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2461f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 246261778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2463f91af8c7SBarry Smith #endif 2464f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 24652f18eb33SBarry Smith PetscFunctionReturn(0); 24662f18eb33SBarry Smith } 2467c5df96a5SBarry Smith 2468d382aafbSBarry Smith /* 24692981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2470d382aafbSBarry Smith */ 2471d382aafbSBarry Smith #if defined(hz) 2472d382aafbSBarry Smith # undef hz 2473d382aafbSBarry Smith #endif 2474d382aafbSBarry Smith 247515a5570dSLisandro Dalcin #include <limits.h> 247615a5570dSLisandro Dalcin 247715a5570dSLisandro Dalcin /* The number of bits in a byte */ 247815a5570dSLisandro Dalcin 247915a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 248015a5570dSLisandro Dalcin 2481d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2482d382aafbSBarry Smith # include <sys/types.h> 2483d382aafbSBarry Smith #endif 2484d382aafbSBarry Smith 2485d382aafbSBarry Smith /*MC 2486d382aafbSBarry Smith 248766d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 248866d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 248966d79e26SBarry Smith 249066d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 249166d79e26SBarry Smith 249266d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 249366d79e26SBarry Smith 249466d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 249566d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 249666d79e26SBarry Smith 249766d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 249866d79e26SBarry Smith 249966d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 250066d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 250166d79e26SBarry Smith version number (x.y.z). 250266d79e26SBarry Smith 250366d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 250466d79e26SBarry Smith 250566d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 250666d79e26SBarry Smith 250766d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 250866d79e26SBarry Smith 250966d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 251066d79e26SBarry Smith 251166d79e26SBarry Smith Level: intermediate 251266d79e26SBarry Smith 251366d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 251466d79e26SBarry Smith 251566d79e26SBarry Smith M*/ 251666d79e26SBarry Smith 2517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 252327710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 25245f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2525d382aafbSBarry Smith 25266a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 25276a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 25286a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2530ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 253122ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2533f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 253460e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2535d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 25396c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 254017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 254117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25435569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 254517df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2546014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 254739f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2549745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 255039f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 25546c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 25556c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2556e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2557ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2558ce605777SToby Isaac 25594d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2560676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2561676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2562676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 25634d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2564676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2565676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2566676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2567676f2a66SJacob Faibussowitsch 2568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2570d382aafbSBarry Smith 257176bdecfbSBarry Smith /*J 2572d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2573d382aafbSBarry Smith 2574d382aafbSBarry Smith Level: beginner 2575d382aafbSBarry Smith 2576e28ce29aSPatrick Sanan Notes: 2577e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 257825ccb61fSToby Isaac with the option --download-sprng or --download-random123 2579d382aafbSBarry Smith 25808f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 258176bdecfbSBarry Smith J*/ 258219fd82e9SBarry Smith typedef const char* PetscRandomType; 2583d382aafbSBarry Smith #define PETSCRAND "rand" 2584d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2585d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2586c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 258725ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2588808ba619SStefano Zampini #define PETSCCURAND "curand" 2589d382aafbSBarry Smith 2590d382aafbSBarry Smith /* Logging support */ 2591014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2592d382aafbSBarry Smith 2593607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2594d382aafbSBarry Smith 2595d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2596140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2597d382aafbSBarry Smith 2598bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 259919fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 260119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2602fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2604d382aafbSBarry Smith 2605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2608808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2609808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2616d382aafbSBarry Smith 2617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 262497540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 26258a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 262697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2627d382aafbSBarry Smith 262830815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 262930815ce0SLisandro Dalcin 26309860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 26319860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2632f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2633f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2634014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2641c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2642e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2643c891a504SStefano Zampini #endif 2644d382aafbSBarry Smith 2645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2648d382aafbSBarry Smith 2649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 26552a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2656d382aafbSBarry Smith 2657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2660014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2662cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2663cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2664d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2665d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2666d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2667d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 26686afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 26696afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26706afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26716afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26726afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2673d382aafbSBarry Smith 26746145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26756145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26766145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26776145cd65SJed Brown 2678014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2679d382aafbSBarry Smith 2680ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2681ce94432eSBarry Smith 268245487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 268345487dadSJed Brown 2684d382aafbSBarry Smith struct _n_PetscSubcomm { 2685d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2686d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2687306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 268845487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 268945487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2690708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 269145487dadSJed Brown PetscSubcommType type; 2692e5acf8a4SHong Zhang char *subcommprefix; 2693d382aafbSBarry Smith }; 2694d382aafbSBarry Smith 2695c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2696306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 269736be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2698014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2699014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2700014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2701014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 270265d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2703053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2704f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2705e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2706a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2707a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2708a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2709d382aafbSBarry Smith 27109962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 27119962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 27129962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 27139962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 27149962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 27159962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 27169962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 27179962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 27189962606eSBarry Smith 27195e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 27205f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 27215f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27225f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27235f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 27245e71baefSBarry Smith 2725a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2726a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2727a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2728a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2729a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2730a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2731a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2732a32e93adSJunchao Zhang 273313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 27340f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 273513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2736137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2737137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2738137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 273913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 274013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 27410f453b92SJed Brown 2742471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2743471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2744471ecdacSJed Brown * possible. */ 27456a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2746d382aafbSBarry Smith 27479de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27489de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27499de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27509de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27519de0f6ecSBarry Smith 2752ace2fbaeSBarry Smith #include <stdarg.h> 2753ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2754ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2755ace2fbaeSBarry Smith 2756268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2757fbfcfee5SBarry Smith 27581f817a21SBarry Smith /*@C 27591f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 27601f817a21SBarry Smith 27611f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 27621f817a21SBarry Smith 27631f817a21SBarry Smith Input Parameters: 27641f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 27651f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 27661f817a21SBarry Smith 2767850545d0SSatish Balay Level: intermediate 2768850545d0SSatish Balay 2769f5f57ec0SBarry Smith Not available from Fortran 2770f5f57ec0SBarry Smith 27711f817a21SBarry Smith Options Database: 2772063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27731f817a21SBarry Smith @*/ 2774dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2775dff31646SBarry Smith { 2776dff31646SBarry Smith size_t len; 2777dff31646SBarry Smith char *vstring; 2778dff31646SBarry Smith PetscErrorCode ierr; 2779dff31646SBarry Smith 27801f817a21SBarry Smith PetscFunctionBegin; 27818d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2782dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 278335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2784580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2785dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27861f817a21SBarry Smith PetscFunctionReturn(0); 2787dff31646SBarry Smith } 2788dff31646SBarry Smith 2789b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2790fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2791fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2792f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2793fe278a28SBarry Smith 2794f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2795f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2796b967cddfSBarry Smith 27979f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27989f4d3c52SBarry Smith 279904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2800763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2801dff31646SBarry Smith 280268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 28035dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2804d382aafbSBarry Smith 2805b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2806503e1a2cSLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscStrHash(const char *str) 2807df05ca09SBarry Smith { 2808df05ca09SBarry Smith unsigned int c,hash = 5381; 2809df05ca09SBarry Smith 2810503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2811df05ca09SBarry Smith return hash; 2812df05ca09SBarry Smith } 281377a5e07dSBarry Smith 281477a5e07dSBarry Smith /*MC 281577a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 281677a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 281777a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 281877a5e07dSBarry Smith 2819d083f849SBarry Smith Collective 282077a5e07dSBarry Smith 282177a5e07dSBarry Smith Synopsis: 282277a5e07dSBarry Smith #include <petscsys.h> 282377a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 282477a5e07dSBarry Smith 282577a5e07dSBarry Smith Input Parameters: 2826df05ca09SBarry Smith + a - pointer to the input data to be reduced 2827df05ca09SBarry Smith . c - the number of MPI data items in a and b 2828df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2829df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2830df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 283177a5e07dSBarry Smith 283277a5e07dSBarry Smith Output Parameter: 2833df05ca09SBarry Smith . b - the reduced values 283477a5e07dSBarry Smith 2835e28ce29aSPatrick Sanan Notes: 2836e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 283777a5e07dSBarry Smith 2838df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2839df05ca09SBarry Smith 2840df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2841df05ca09SBarry Smith 284277a5e07dSBarry Smith Level: developer 284377a5e07dSBarry Smith 284477a5e07dSBarry Smith .seealso: MPI_Allreduce() 284577a5e07dSBarry Smith M*/ 2846df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do {\ 2847df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2848df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6];\ 2849df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2850df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2851df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2852df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 2853df05ca09SBarry Smith if (-a_b2[0] != a_b2[1]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 2854df05ca09SBarry Smith if (-a_b2[2] != a_b2[3]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 2855df05ca09SBarry Smith if (-a_b2[4] != a_b2[5]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",c);\ 2856df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2857df05ca09SBarry Smith } while (0) 2858b2566f29SBarry Smith #else 2859df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2860b2566f29SBarry Smith #endif 2861b2566f29SBarry Smith 2862b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 28638198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 28648198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 28652f065d89SBarry Smith #endif 28668198064fSBarry Smith 2867cd88fca5SStefano Zampini /* this is a vile hack */ 2868cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 2869961fb248SStefano Zampini #if !defined(PETSC_NECMPI_VERSION_MAJOR) || \ 2870961fb248SStefano Zampini !defined(PETSC_NECMPI_VERSION_MINOR) || \ 2871961fb248SStefano Zampini PETSC_NECMPI_VERSION_MAJOR < 2 || \ 2872961fb248SStefano Zampini (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2873cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0); 2874cd88fca5SStefano Zampini #endif 2875961fb248SStefano Zampini #endif 2876cd88fca5SStefano Zampini 287712801b39SBarry Smith /* 287860fbe2beSVaclav Hapla List of external packages and queries on it 287960fbe2beSVaclav Hapla */ 288060fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 288160fbe2beSVaclav Hapla 2882d382aafbSBarry Smith #endif 2883