1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 111c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 121c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 131cc8b206SBarry Smith directory as the other PETSc include files. 14d382aafbSBarry Smith */ 152c8e378dSBarry Smith #include <petscconf.h> 161c77a0c5SBarry Smith #include <petscconf_poison.h> 172c8e378dSBarry Smith #include <petscfix.h> 18d382aafbSBarry Smith 1920c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 2005035670SJunchao Zhang #define PETSC_HAVE_DEVICE 2105035670SJunchao Zhang #endif 2205035670SJunchao Zhang 2373fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2473fca5a0SBarry Smith /* 2573fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2673fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2773fca5a0SBarry Smith */ 28216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2973fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 3073fca5a0SBarry Smith # endif 31216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3273fca5a0SBarry Smith # define _BSD_SOURCE 3373fca5a0SBarry Smith # endif 3407f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3507f00807SSatish Balay # define _DEFAULT_SOURCE 3607f00807SSatish Balay # endif 37ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 38ea0fecefSShri Abhyankar # define _GNU_SOURCE 39ea0fecefSShri Abhyankar # endif 4073fca5a0SBarry Smith #endif 4173fca5a0SBarry Smith 42df4397b0SStefano Zampini #include <petscsystypes.h> 43df4397b0SStefano Zampini 44d382aafbSBarry Smith /* ========================================================================== */ 45d382aafbSBarry Smith /* 462c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 47d382aafbSBarry Smith */ 481ec50b02SJed Brown #if defined(__cplusplus) 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 501ec50b02SJed Brown #else 511ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 521ec50b02SJed Brown #endif 53d382aafbSBarry Smith 54c5e4d11fSDmitry Karpeev /* ========================================================================== */ 55c5e4d11fSDmitry Karpeev /* 56c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 571cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 581cc8b206SBarry Smith file within an extern "C". 59c5e4d11fSDmitry Karpeev */ 60c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 61c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 62c5e4d11fSDmitry Karpeev #endif 63c5e4d11fSDmitry Karpeev 64ed938b00SJed Brown #if defined(__cplusplus) 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 66ed938b00SJed Brown #else 67ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 70ed938b00SJed Brown #if defined(__cplusplus) 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 72ed938b00SJed Brown #else 7358c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 74ed938b00SJed Brown #endif 75ed938b00SJed Brown 7658c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7758c433abSLisandro Dalcin 78ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 79014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 80014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 8121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8226703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8326703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8426703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8526703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 87014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 88014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 90d382aafbSBarry Smith #else 91014dd563SJed Brown # define PETSC_DLLEXPORT 92014dd563SJed Brown # define PETSC_DLLIMPORT 9321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 94014dd563SJed Brown #endif 95014dd563SJed Brown 96014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 98014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 99014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 100014dd563SJed Brown #endif 101014dd563SJed Brown 1021cc8b206SBarry Smith /* 1031cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1041cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1051cc8b206SBarry Smith used from C and are always visible in the shared libraries 1061cc8b206SBarry Smith */ 1072c280183SJed Brown #if defined(__cplusplus) 108014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 109638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 11021f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 111014dd563SJed Brown #else 112014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 113638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1146258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 115d382aafbSBarry Smith #endif 11627710113SBarry Smith 117030f984aSJacob Faibussowitsch #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX11) 118030f984aSJacob Faibussowitsch # define PETSC_NULLPTR nullptr 119030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR constexpr 120030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT noexcept 121030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) noexcept(cond_) 122030f984aSJacob Faibussowitsch # define PETSC_CXX_DEFAULT(func_) func_ = default 123030f984aSJacob Faibussowitsch #else 124030f984aSJacob Faibussowitsch # define PETSC_NULLPTR NULL 125030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR 126030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT 127030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) 128030f984aSJacob Faibussowitsch # define PETSC_CXX_DEFAULT(func_) 129030f984aSJacob Faibussowitsch #endif 130030f984aSJacob Faibussowitsch 131*0a996781SJunchao Zhang /* C++17 features */ 132*0a996781SJunchao Zhang /* We met cases that the host CXX compiler (say mpicxx) supports C++17, but nvcc does not agree, even with -ccbin mpicxx! */ 133*0a996781SJunchao Zhang #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX17) && (!defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_CUDA_DIALECT_CXX17)) 134030f984aSJacob Faibussowitsch # define PETSC_NODISCARD [[nodiscard]] 135030f984aSJacob Faibussowitsch #else 136030f984aSJacob Faibussowitsch # define PETSC_NODISCARD 137030f984aSJacob Faibussowitsch #endif 138030f984aSJacob Faibussowitsch 1392c8e378dSBarry Smith #include <petscversion.h> 140a17b96a8SKyle Gerard Felker #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://petsc.org/\n" 141d382aafbSBarry Smith 142d382aafbSBarry Smith /* ========================================================================== */ 143d382aafbSBarry Smith 144d382aafbSBarry Smith /* 145d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 146d382aafbSBarry Smith 147d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 148d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 149d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 150d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 151d382aafbSBarry Smith mpicxx.h directly in their code 152d382aafbSBarry Smith */ 153fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 154d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 155fa9e63e2SJed Brown #endif 156fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 157d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 158fa9e63e2SJed Brown #endif 159e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 160e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 161e771154cSJed Brown #else 1622c8e378dSBarry Smith # include <mpi.h> 163e771154cSJed Brown #endif 16465013866SBarry Smith 1654e1ad211SJed Brown /*MC 1664e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1674e1ad211SJed Brown 1684e1ad211SJed Brown Notes: 1691393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1701393a3abSPatrick Sanan 1714e1ad211SJed Brown Typical usage is within normal code, 1724e1ad211SJed Brown 1734e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1744e1ad211SJed Brown 1754e1ad211SJed Brown but can also be used in the preprocessor, 1764e1ad211SJed Brown 1774e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1784e1ad211SJed Brown $ ... 1794e1ad211SJed Brown $ #else 1804e1ad211SJed Brown 1811393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1824e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1834e1ad211SJed Brown 1841393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1851393a3abSPatrick Sanan 1861393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1871393a3abSPatrick Sanan 1884e1ad211SJed Brown Developer Notes: 1894e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1904e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1914e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1924e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1934e1ad211SJed Brown 1944e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1954e1ad211SJed Brown implementation of variadic macros. 1964e1ad211SJed Brown 1974e1ad211SJed Brown Level: developer 1984e1ad211SJed Brown M*/ 1994e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 2004e1ad211SJed Brown # define PetscDefined_arg_1 shift, 2014e1ad211SJed Brown # define PetscDefined_arg_ shift, 2024e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 2034e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 2044e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 2054e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 2064e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 2074e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 2084e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 2094e1ad211SJed Brown #endif 2104e1ad211SJed Brown 211d382aafbSBarry Smith /* 212a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 213a7886beaSBarry Smith This usually happens because 214a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 215a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 216a7886beaSBarry Smith */ 217a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 218c9b973beSBarry Smith # if !defined(MPIUNI_H) 219a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 220a7886beaSBarry Smith # endif 22141f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 22241f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 22341f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 22441f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 22541f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 22641f4af4cSSatish Balay # endif 22741f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 22841f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 22941f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 23041f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 23141f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 23241f4af4cSSatish Balay # endif 233a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 23441f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 235a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 236ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 237a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 238a7886beaSBarry Smith # endif 239a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 240a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 241a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 242ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 243c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 244a7886beaSBarry Smith # endif 245d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 246d97fd468SStefano Zampini # if !defined(MSMPI_VER) 247d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 248d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 249d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 250d97fd468SStefano Zampini # endif 251d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 252d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 253a7886beaSBarry Smith #endif 254a7886beaSBarry Smith 255a7886beaSBarry Smith /* 2562981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 257d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 258d382aafbSBarry Smith */ 259d382aafbSBarry Smith #include <stdio.h> 260d382aafbSBarry Smith 261d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 262d382aafbSBarry Smith #if !defined(MPIAPI) 263d382aafbSBarry Smith #define MPIAPI 264d382aafbSBarry Smith #endif 265d382aafbSBarry Smith 2661cc8b206SBarry Smith /* 2671cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2681cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2691cc8b206SBarry Smith does not match the actual type of the argument being passed in 2701cc8b206SBarry Smith */ 271c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 272894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 273894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2748ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2758ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 276894dd566SJed Brown # endif 277894dd566SJed Brown #endif 278894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 279894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2808ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2818ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 282894dd566SJed Brown #endif 283b3506946SBarry Smith 2845a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 285df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 286e28ce29aSPatrick Sanan 287e28ce29aSPatrick Sanan /*MC 288e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 289e28ce29aSPatrick Sanan 290e28ce29aSPatrick Sanan Notes: 291e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 292e28ce29aSPatrick Sanan 293e28ce29aSPatrick Sanan Level: beginner 294e28ce29aSPatrick Sanan 295e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 296e28ce29aSPatrick Sanan M*/ 297e28ce29aSPatrick Sanan 29837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 299bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 300a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 301fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 302bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 303a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 304f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 305bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 306a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 307236ed0a3SSatish Balay #else 308bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 309236ed0a3SSatish Balay #endif 310b7b8f77aSBarry Smith 3117cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 312b7b8f77aSBarry Smith 313d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 314bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 315a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 316d382aafbSBarry Smith #else 317d382aafbSBarry Smith # define MPIU_INT MPI_INT 318a05e1a72SSatish Balay # define PetscInt_FMT "d" 319d382aafbSBarry Smith #endif 320d382aafbSBarry Smith 321503cfb0cSBarry Smith /* 322503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 323503cfb0cSBarry Smith */ 324e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 325d382aafbSBarry Smith 326d382aafbSBarry Smith /* 327d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 328d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 329d382aafbSBarry Smith */ 330014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 331d382aafbSBarry Smith 332d382aafbSBarry Smith /* 333d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 334d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 335d382aafbSBarry Smith */ 336014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 337d382aafbSBarry Smith 338d382aafbSBarry Smith /*MC 339d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 340d382aafbSBarry Smith 341d382aafbSBarry Smith Synopsis: 342aaa7dc30SBarry Smith #include <petscsys.h> 343ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 344d382aafbSBarry Smith 345eca87e8dSBarry Smith Not Collective 346eca87e8dSBarry Smith 347d382aafbSBarry Smith Input Parameters: 348d382aafbSBarry Smith . cond - condition or expression 349d382aafbSBarry Smith 350e28ce29aSPatrick Sanan Notes: 351e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 352d382aafbSBarry Smith branch is unlikely. 353d382aafbSBarry Smith 354d382aafbSBarry Smith Level: advanced 355d382aafbSBarry Smith 356cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 357d382aafbSBarry Smith M*/ 358d382aafbSBarry Smith 359d382aafbSBarry Smith /*MC 360d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 361d382aafbSBarry Smith 362d382aafbSBarry Smith Synopsis: 363aaa7dc30SBarry Smith #include <petscsys.h> 36423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 365d382aafbSBarry Smith 366eca87e8dSBarry Smith Not Collective 367eca87e8dSBarry Smith 368d382aafbSBarry Smith Input Parameters: 369d382aafbSBarry Smith . cond - condition or expression 370d382aafbSBarry Smith 371e28ce29aSPatrick Sanan Notes: 372e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 373d382aafbSBarry Smith branch is likely. 374d382aafbSBarry Smith 375d382aafbSBarry Smith Level: advanced 376d382aafbSBarry Smith 377d382aafbSBarry Smith .seealso: PetscUnlikely() 378d382aafbSBarry Smith M*/ 379d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 380d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 381d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 382d382aafbSBarry Smith #else 383cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 384cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 385d382aafbSBarry Smith #endif 386d382aafbSBarry Smith 387cf9c20a2SJed Brown /*MC 388cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 389cf9c20a2SJed Brown 390cf9c20a2SJed Brown Synopsis: 391cf9c20a2SJed Brown #include <petscsys.h> 392cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 393cf9c20a2SJed Brown 394cf9c20a2SJed Brown Not Collective 395cf9c20a2SJed Brown 396cf9c20a2SJed Brown Input Parameters: 397cf9c20a2SJed Brown . cond - condition or expression 398cf9c20a2SJed Brown 399cf9c20a2SJed Brown Notes: 400cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 401cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 402cf9c20a2SJed Brown 403cf9c20a2SJed Brown Level: advanced 404cf9c20a2SJed Brown 405cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 406cf9c20a2SJed Brown M*/ 407cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 408cf9c20a2SJed Brown 409c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 410c8b9133aSSatish Balay 4115c993f7fSStefano Zampini #if defined(__NEC__) 4125c993f7fSStefano Zampini # define PetscPragmaSIMD _Pragma("_NEC ivdep") 4135c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 414c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 4151dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 416c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 417160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 418c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 419160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 420160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 421c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 422c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 423c8b9133aSSatish Balay #else 424c8b9133aSSatish Balay # define PetscPragmaSIMD 425c8b9133aSSatish Balay #endif 426c8b9133aSSatish Balay 427d382aafbSBarry Smith /* 428d382aafbSBarry Smith Declare extern C stuff after including external header files 429d382aafbSBarry Smith */ 430d382aafbSBarry Smith 4316a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 43270b3c8c7SBarry Smith 4336edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 4348b49ba18SBarry Smith /* 435390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4368b49ba18SBarry Smith */ 4378b49ba18SBarry Smith #include <petscmath.h> 4388b49ba18SBarry Smith 4396a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 440d382aafbSBarry Smith 441d382aafbSBarry Smith /*MC 4420298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 443d382aafbSBarry Smith 444d382aafbSBarry Smith Level: beginner 445d382aafbSBarry Smith 446e28ce29aSPatrick Sanan Note: 447e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 448d382aafbSBarry Smith some default 449d382aafbSBarry Smith 450e28ce29aSPatrick Sanan Fortran Notes: 451e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 452d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 453d382aafbSBarry Smith 454e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 455d382aafbSBarry Smith 456d382aafbSBarry Smith M*/ 4570298fd71SBarry Smith #define PETSC_IGNORE NULL 458d382aafbSBarry Smith 459c528d872SBarry Smith /* This is deprecated */ 460c528d872SBarry Smith #define PETSC_NULL NULL 461c528d872SBarry Smith 462d382aafbSBarry Smith /*MC 463557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 464557d4da8SBarry Smith where you wish PETSc to use the default. 465557d4da8SBarry Smith 466557d4da8SBarry Smith Level: beginner 467557d4da8SBarry Smith 468e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 469557d4da8SBarry Smith 470557d4da8SBarry Smith M*/ 471557d4da8SBarry Smith #define PETSC_DECIDE -1 472557d4da8SBarry Smith 473557d4da8SBarry Smith /*MC 474d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 475d382aafbSBarry Smith where you wish PETSc to compute the required value. 476d382aafbSBarry Smith 477d382aafbSBarry Smith Level: beginner 478d382aafbSBarry Smith 479e28ce29aSPatrick Sanan Developer Note: 480e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 481557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 482557d4da8SBarry Smith 4830298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 484d382aafbSBarry Smith 485d382aafbSBarry Smith M*/ 486d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 487d382aafbSBarry Smith 488d382aafbSBarry Smith /*MC 489557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 490557d4da8SBarry Smith where you wish PETSc to use the default. 491557d4da8SBarry Smith 492557d4da8SBarry Smith Level: beginner 493557d4da8SBarry Smith 494e28ce29aSPatrick Sanan Fortran Notes: 495e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 496557d4da8SBarry Smith 4970298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 498557d4da8SBarry Smith 499557d4da8SBarry Smith M*/ 500557d4da8SBarry Smith #define PETSC_DEFAULT -2 501557d4da8SBarry Smith 502557d4da8SBarry Smith /*MC 503d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 504ea8fe74dSBarry Smith all the processes that PETSc knows about. 505d382aafbSBarry Smith 506d382aafbSBarry Smith Level: beginner 507d382aafbSBarry Smith 508e28ce29aSPatrick Sanan Notes: 509e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 510d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 511d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 512a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 513a990b902SBarry Smith 514a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 515a990b902SBarry Smith is called because it may not have a valid value yet. 516d382aafbSBarry Smith 517d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 518d382aafbSBarry Smith 519d382aafbSBarry Smith M*/ 520014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 521d382aafbSBarry Smith 522d382aafbSBarry Smith /*MC 523503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 524d382aafbSBarry Smith 525d382aafbSBarry Smith Level: beginner 526d382aafbSBarry Smith 527e28ce29aSPatrick Sanan Notes: 528e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 529a990b902SBarry Smith 530d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 531d382aafbSBarry Smith 532d382aafbSBarry Smith M*/ 533d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 534d382aafbSBarry Smith 5356de5d289SStefano Zampini /*MC 5366de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5376de5d289SStefano Zampini MPI with MPI_Init_thread. 5386de5d289SStefano Zampini 5396de5d289SStefano Zampini Level: beginner 5406de5d289SStefano Zampini 5416de5d289SStefano Zampini Notes: 5426de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5436de5d289SStefano Zampini 5446de5d289SStefano Zampini .seealso: PetscInitialize() 5456de5d289SStefano Zampini 5466de5d289SStefano Zampini M*/ 5476de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5486de5d289SStefano Zampini 549d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5508ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 551014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 552014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5534cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 554d382aafbSBarry Smith 555014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 558d382aafbSBarry Smith 5597381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 56005035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 561cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5623c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5637381773fSBarry Smith #endif 5647381773fSBarry Smith 56505035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 56605035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 56705035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5683c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 56905035670SJunchao Zhang #endif 57005035670SJunchao Zhang 57159e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 57259e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 57359e55d94SJunchao Zhang #endif 57459e55d94SJunchao Zhang 57571438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 57671438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 57771438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 57871438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 57971438e86SJunchao Zhang #endif 58071438e86SJunchao Zhang 581540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 582540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 583540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 584540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 585540e20f2SPierre Jolivet #endif 586540e20f2SPierre Jolivet 587d382aafbSBarry Smith /*MC 58895dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 589d382aafbSBarry Smith 590eca87e8dSBarry Smith Synopsis: 591aaa7dc30SBarry Smith #include <petscsys.h> 592eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 593eca87e8dSBarry Smith 594eca87e8dSBarry Smith Not Collective 595eca87e8dSBarry Smith 596d382aafbSBarry Smith Input Parameter: 597d382aafbSBarry Smith . m - number of bytes to allocate 598d382aafbSBarry Smith 599d382aafbSBarry Smith Output Parameter: 600d382aafbSBarry Smith . result - memory allocated 601d382aafbSBarry Smith 602d382aafbSBarry Smith Level: beginner 603d382aafbSBarry Smith 60449d7da52SJed Brown Notes: 60549d7da52SJed Brown Memory is always allocated at least double aligned 606d382aafbSBarry Smith 60749d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 608d382aafbSBarry Smith 609d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 610d382aafbSBarry Smith 611d382aafbSBarry Smith M*/ 612071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 613d382aafbSBarry Smith 614d382aafbSBarry Smith /*MC 6153221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 6163221ece2SMatthew G. Knepley 6173221ece2SMatthew G. Knepley Synopsis: 6183221ece2SMatthew G. Knepley #include <petscsys.h> 6193221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 6203221ece2SMatthew G. Knepley 6213221ece2SMatthew G. Knepley Not Collective 6223221ece2SMatthew G. Knepley 6233221ece2SMatthew G. Knepley Input Parameters: 6243221ece2SMatthew G. Knepley + m - number of bytes to allocate 62592f119d6SBarry Smith - result - previous memory 6263221ece2SMatthew G. Knepley 6273221ece2SMatthew G. Knepley Output Parameter: 6283221ece2SMatthew G. Knepley . result - new memory allocated 6293221ece2SMatthew G. Knepley 6303221ece2SMatthew G. Knepley Level: developer 6313221ece2SMatthew G. Knepley 6323221ece2SMatthew G. Knepley Notes: 6333221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6343221ece2SMatthew G. Knepley 6353221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6363221ece2SMatthew G. Knepley 6373221ece2SMatthew G. Knepley M*/ 6383221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6393221ece2SMatthew G. Knepley 6403221ece2SMatthew G. Knepley /*MC 641503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 642d382aafbSBarry Smith 643d382aafbSBarry Smith Synopsis: 644aaa7dc30SBarry Smith #include <petscsys.h> 645d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 646d382aafbSBarry Smith 647eca87e8dSBarry Smith Not Collective 648eca87e8dSBarry Smith 649eca87e8dSBarry Smith Input Parameters: 650eca87e8dSBarry Smith . addr - address to align (any pointer type) 651eca87e8dSBarry Smith 652d382aafbSBarry Smith Level: developer 653d382aafbSBarry Smith 654d382aafbSBarry Smith .seealso: PetscMallocAlign() 655d382aafbSBarry Smith 656d382aafbSBarry Smith M*/ 657d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 658d382aafbSBarry Smith 659d382aafbSBarry Smith /*MC 6608f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 6618f51dc47SJunchao Zhang 6628f51dc47SJunchao Zhang Synopsis: 6638f51dc47SJunchao Zhang #include <petscsys.h> 6648f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 6658f51dc47SJunchao Zhang 6668f51dc47SJunchao Zhang Not Collective 6678f51dc47SJunchao Zhang 6688f51dc47SJunchao Zhang Input Parameter: 6698f51dc47SJunchao Zhang . m - number of bytes to allocate 6708f51dc47SJunchao Zhang 6718f51dc47SJunchao Zhang Output Parameter: 6728f51dc47SJunchao Zhang . result - memory allocated 6738f51dc47SJunchao Zhang 6748f51dc47SJunchao Zhang Level: beginner 6758f51dc47SJunchao Zhang 6768f51dc47SJunchao Zhang Notes: 6778f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 6788f51dc47SJunchao Zhang 6798f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 6808f51dc47SJunchao Zhang 6818f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 6828f51dc47SJunchao Zhang 6838f51dc47SJunchao Zhang M*/ 6848f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 6858f51dc47SJunchao Zhang 6868f51dc47SJunchao Zhang /*MC 687785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 688d382aafbSBarry Smith 689eca87e8dSBarry Smith Synopsis: 690aaa7dc30SBarry Smith #include <petscsys.h> 691785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 692785e854fSJed Brown 693785e854fSJed Brown Not Collective 694785e854fSJed Brown 695785e854fSJed Brown Input Parameter: 696390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 697785e854fSJed Brown 698785e854fSJed Brown Output Parameter: 6991fe1b817SJunchao Zhang . r1 - memory allocated 700785e854fSJed Brown 701e28ce29aSPatrick Sanan Note: 702e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 703390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 704390e1bf2SBarry Smith $ PetscInt *id; 705390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 706390e1bf2SBarry Smith not 707390e1bf2SBarry Smith $ PetscInt *id; 708390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 709390e1bf2SBarry Smith 7101fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 711390e1bf2SBarry Smith 712390e1bf2SBarry Smith Level: beginner 713785e854fSJed Brown 7141795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 715785e854fSJed Brown 716785e854fSJed Brown M*/ 7172553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 718785e854fSJed Brown 719785e854fSJed Brown /*MC 7201795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 7211795a4d1SJed Brown 7221795a4d1SJed Brown Synopsis: 723aaa7dc30SBarry Smith #include <petscsys.h> 7241795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 7251795a4d1SJed Brown 7261795a4d1SJed Brown Not Collective 7271795a4d1SJed Brown 7281795a4d1SJed Brown Input Parameter: 7291795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7301795a4d1SJed Brown 7311795a4d1SJed Brown Output Parameter: 7321fe1b817SJunchao Zhang . r1 - memory allocated 7331795a4d1SJed Brown 734e28ce29aSPatrick Sanan Notes: 735e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 736390e1bf2SBarry Smith 737390e1bf2SBarry Smith Level: beginner 7381795a4d1SJed Brown 7391795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7401795a4d1SJed Brown 7411795a4d1SJed Brown M*/ 7422553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7431795a4d1SJed Brown 7441795a4d1SJed Brown /*MC 745dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 746d382aafbSBarry Smith 747eca87e8dSBarry Smith Synopsis: 748aaa7dc30SBarry Smith #include <petscsys.h> 749dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 750eca87e8dSBarry Smith 751eca87e8dSBarry Smith Not Collective 752eca87e8dSBarry Smith 753d8d19677SJose E. Roman Input Parameters: 754d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 755dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 756d382aafbSBarry Smith 757d8d19677SJose E. Roman Output Parameters: 758d382aafbSBarry Smith + r1 - memory allocated in first chunk 759d382aafbSBarry Smith - r2 - memory allocated in second chunk 760d382aafbSBarry Smith 761d382aafbSBarry Smith Level: developer 762d382aafbSBarry Smith 7631795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 764d382aafbSBarry Smith 765d382aafbSBarry Smith M*/ 7662553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 767d382aafbSBarry Smith 768d382aafbSBarry Smith /*MC 7691795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 770d382aafbSBarry Smith 771eca87e8dSBarry Smith Synopsis: 772aaa7dc30SBarry Smith #include <petscsys.h> 7731795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 774eca87e8dSBarry Smith 775eca87e8dSBarry Smith Not Collective 776eca87e8dSBarry Smith 777d8d19677SJose E. Roman Input Parameters: 778d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7791795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7801795a4d1SJed Brown 781d8d19677SJose E. Roman Output Parameters: 7821795a4d1SJed Brown + r1 - memory allocated in first chunk 7831795a4d1SJed Brown - r2 - memory allocated in second chunk 7841795a4d1SJed Brown 7851795a4d1SJed Brown Level: developer 7861795a4d1SJed Brown 7871795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7881795a4d1SJed Brown 7891795a4d1SJed Brown M*/ 7902553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7911795a4d1SJed Brown 7921795a4d1SJed Brown /*MC 793dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 794d382aafbSBarry Smith 795d382aafbSBarry Smith Synopsis: 796aaa7dc30SBarry Smith #include <petscsys.h> 797dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 798d382aafbSBarry Smith 799d382aafbSBarry Smith Not Collective 800d382aafbSBarry Smith 801d8d19677SJose E. Roman Input Parameters: 802d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 803d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 804dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 805d382aafbSBarry Smith 806d8d19677SJose E. Roman Output Parameters: 807d382aafbSBarry Smith + r1 - memory allocated in first chunk 808d382aafbSBarry Smith . r2 - memory allocated in second chunk 809d382aafbSBarry Smith - r3 - memory allocated in third chunk 810d382aafbSBarry Smith 811d382aafbSBarry Smith Level: developer 812d382aafbSBarry Smith 8131795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 814d382aafbSBarry Smith 815d382aafbSBarry Smith M*/ 8162553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 817d382aafbSBarry Smith 818d382aafbSBarry Smith /*MC 8191795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 820d382aafbSBarry Smith 821eca87e8dSBarry Smith Synopsis: 822aaa7dc30SBarry Smith #include <petscsys.h> 8231795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 824eca87e8dSBarry Smith 825eca87e8dSBarry Smith Not Collective 826eca87e8dSBarry Smith 827d8d19677SJose E. Roman Input Parameters: 828d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 829d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8301795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8311795a4d1SJed Brown 832d8d19677SJose E. Roman Output Parameters: 8331795a4d1SJed Brown + r1 - memory allocated in first chunk 8341795a4d1SJed Brown . r2 - memory allocated in second chunk 8351795a4d1SJed Brown - r3 - memory allocated in third chunk 8361795a4d1SJed Brown 8371795a4d1SJed Brown Level: developer 8381795a4d1SJed Brown 8391795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8401795a4d1SJed Brown 8411795a4d1SJed Brown M*/ 8422553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8431795a4d1SJed Brown 8441795a4d1SJed Brown /*MC 845dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 846d382aafbSBarry Smith 847d382aafbSBarry Smith Synopsis: 848aaa7dc30SBarry Smith #include <petscsys.h> 849dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 850d382aafbSBarry Smith 851d382aafbSBarry Smith Not Collective 852d382aafbSBarry Smith 853d8d19677SJose E. Roman Input Parameters: 854d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 855d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 856d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 857dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 858d382aafbSBarry Smith 859d8d19677SJose E. Roman Output Parameters: 860d382aafbSBarry Smith + r1 - memory allocated in first chunk 861d382aafbSBarry Smith . r2 - memory allocated in second chunk 862d382aafbSBarry Smith . r3 - memory allocated in third chunk 863d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 864d382aafbSBarry Smith 865d382aafbSBarry Smith Level: developer 866d382aafbSBarry Smith 8671795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 868d382aafbSBarry Smith 869d382aafbSBarry Smith M*/ 8702553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 871d382aafbSBarry Smith 872d382aafbSBarry Smith /*MC 8731795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 874d382aafbSBarry Smith 875eca87e8dSBarry Smith Synopsis: 876aaa7dc30SBarry Smith #include <petscsys.h> 8771795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 878eca87e8dSBarry Smith 879eca87e8dSBarry Smith Not Collective 880eca87e8dSBarry Smith 881e28ce29aSPatrick Sanan Input Parameters: 882d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 883d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 884d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8851795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8861795a4d1SJed Brown 887e28ce29aSPatrick Sanan Output Parameters: 8881795a4d1SJed Brown + r1 - memory allocated in first chunk 8891795a4d1SJed Brown . r2 - memory allocated in second chunk 8901795a4d1SJed Brown . r3 - memory allocated in third chunk 8911795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8921795a4d1SJed Brown 8931795a4d1SJed Brown Level: developer 8941795a4d1SJed Brown 8951795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8961795a4d1SJed Brown 8971795a4d1SJed Brown M*/ 8982553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8991795a4d1SJed Brown 9001795a4d1SJed Brown /*MC 901dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 902d382aafbSBarry Smith 903d382aafbSBarry Smith Synopsis: 904aaa7dc30SBarry Smith #include <petscsys.h> 905dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 906d382aafbSBarry Smith 907d382aafbSBarry Smith Not Collective 908d382aafbSBarry Smith 909e28ce29aSPatrick Sanan Input Parameters: 910d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 911d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 912d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 913d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 914dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 915d382aafbSBarry Smith 916e28ce29aSPatrick Sanan Output Parameters: 917d382aafbSBarry Smith + r1 - memory allocated in first chunk 918d382aafbSBarry Smith . r2 - memory allocated in second chunk 919d382aafbSBarry Smith . r3 - memory allocated in third chunk 920d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 921d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 922d382aafbSBarry Smith 923d382aafbSBarry Smith Level: developer 924d382aafbSBarry Smith 9251795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 926d382aafbSBarry Smith 927d382aafbSBarry Smith M*/ 9282553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 929d382aafbSBarry Smith 930d382aafbSBarry Smith /*MC 9311795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 932d382aafbSBarry Smith 933eca87e8dSBarry Smith Synopsis: 934aaa7dc30SBarry Smith #include <petscsys.h> 9351795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 936eca87e8dSBarry Smith 937eca87e8dSBarry Smith Not Collective 938eca87e8dSBarry Smith 939e28ce29aSPatrick Sanan Input Parameters: 940d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 941d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 942d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 943d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9441795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9451795a4d1SJed Brown 946e28ce29aSPatrick Sanan Output Parameters: 9471795a4d1SJed Brown + r1 - memory allocated in first chunk 9481795a4d1SJed Brown . r2 - memory allocated in second chunk 9491795a4d1SJed Brown . r3 - memory allocated in third chunk 9501795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9511795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9521795a4d1SJed Brown 9531795a4d1SJed Brown Level: developer 9541795a4d1SJed Brown 9551795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9561795a4d1SJed Brown 9571795a4d1SJed Brown M*/ 9582553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 959d382aafbSBarry Smith 960d382aafbSBarry Smith /*MC 961dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 962d382aafbSBarry Smith 963d382aafbSBarry Smith Synopsis: 964aaa7dc30SBarry Smith #include <petscsys.h> 965dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 966d382aafbSBarry Smith 967d382aafbSBarry Smith Not Collective 968d382aafbSBarry Smith 969e28ce29aSPatrick Sanan Input Parameters: 970d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 971d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 972d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 973d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 974d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 975dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 976d382aafbSBarry Smith 977e28ce29aSPatrick Sanan Output Parameteasr: 978d382aafbSBarry Smith + r1 - memory allocated in first chunk 979d382aafbSBarry Smith . r2 - memory allocated in second chunk 980d382aafbSBarry Smith . r3 - memory allocated in third chunk 981d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 982d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 983d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 984d382aafbSBarry Smith 985d382aafbSBarry Smith Level: developer 986d382aafbSBarry Smith 9871795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 988d382aafbSBarry Smith 989d382aafbSBarry Smith M*/ 9902553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 991d382aafbSBarry Smith 992d382aafbSBarry Smith /*MC 9931795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 994d382aafbSBarry Smith 995eca87e8dSBarry Smith Synopsis: 996aaa7dc30SBarry Smith #include <petscsys.h> 9971795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 998eca87e8dSBarry Smith 999eca87e8dSBarry Smith Not Collective 1000eca87e8dSBarry Smith 1001e28ce29aSPatrick Sanan Input Parameters: 1002d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1003d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1004d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1005d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1006d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 10071795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 10081795a4d1SJed Brown 1009e28ce29aSPatrick Sanan Output Parameters: 10101795a4d1SJed Brown + r1 - memory allocated in first chunk 10111795a4d1SJed Brown . r2 - memory allocated in second chunk 10121795a4d1SJed Brown . r3 - memory allocated in third chunk 10131795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10141795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10151795a4d1SJed Brown - r6 - memory allocated in sixth chunk 10161795a4d1SJed Brown 10171795a4d1SJed Brown Level: developer 10181795a4d1SJed Brown 10191795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 10201795a4d1SJed Brown 10211795a4d1SJed Brown M*/ 10222553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 10231795a4d1SJed Brown 10241795a4d1SJed Brown /*MC 1025dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 1026d382aafbSBarry Smith 1027d382aafbSBarry Smith Synopsis: 1028aaa7dc30SBarry Smith #include <petscsys.h> 1029dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1030d382aafbSBarry Smith 1031d382aafbSBarry Smith Not Collective 1032d382aafbSBarry Smith 1033e28ce29aSPatrick Sanan Input Parameters: 1034d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1035d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1036d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1037d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1038d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1039d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1040dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1041d382aafbSBarry Smith 1042e28ce29aSPatrick Sanan Output Parameters: 1043d382aafbSBarry Smith + r1 - memory allocated in first chunk 1044d382aafbSBarry Smith . r2 - memory allocated in second chunk 1045d382aafbSBarry Smith . r3 - memory allocated in third chunk 1046d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1047d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1048d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1049eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1050d382aafbSBarry Smith 1051d382aafbSBarry Smith Level: developer 1052d382aafbSBarry Smith 10531795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1054d382aafbSBarry Smith 1055d382aafbSBarry Smith M*/ 10562553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1057d382aafbSBarry Smith 1058d382aafbSBarry Smith /*MC 10591795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10601795a4d1SJed Brown 10611795a4d1SJed Brown Synopsis: 1062aaa7dc30SBarry Smith #include <petscsys.h> 10631795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10641795a4d1SJed Brown 10651795a4d1SJed Brown Not Collective 10661795a4d1SJed Brown 1067e28ce29aSPatrick Sanan Input Parameters: 10681795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10691795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10701795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10711795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10721795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10731795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10741795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10751795a4d1SJed Brown 1076e28ce29aSPatrick Sanan Output Parameters: 10771795a4d1SJed Brown + r1 - memory allocated in first chunk 10781795a4d1SJed Brown . r2 - memory allocated in second chunk 10791795a4d1SJed Brown . r3 - memory allocated in third chunk 10801795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10811795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10821795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10831795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10841795a4d1SJed Brown 10851795a4d1SJed Brown Level: developer 10861795a4d1SJed Brown 10871795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10881795a4d1SJed Brown 10891795a4d1SJed Brown M*/ 10902553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10911795a4d1SJed Brown 10921795a4d1SJed Brown /*MC 1093503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1094d382aafbSBarry Smith 1095eca87e8dSBarry Smith Synopsis: 1096aaa7dc30SBarry Smith #include <petscsys.h> 1097b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1098eca87e8dSBarry Smith 1099eca87e8dSBarry Smith Not Collective 1100eca87e8dSBarry Smith 1101d382aafbSBarry Smith Output Parameter: 1102b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1103d382aafbSBarry Smith 1104d382aafbSBarry Smith Level: beginner 1105d382aafbSBarry Smith 1106390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1107d382aafbSBarry Smith 1108d382aafbSBarry Smith M*/ 1109b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1110ad0619ddSBarry Smith 1111ad0619ddSBarry Smith /*MC 1112b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1113ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1114ad0619ddSBarry Smith 1115ad0619ddSBarry Smith Synopsis: 1116aaa7dc30SBarry Smith #include <petscsys.h> 1117b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1118ad0619ddSBarry Smith 1119ad0619ddSBarry Smith Not Collective 1120ad0619ddSBarry Smith 1121ad0619ddSBarry Smith Input Parameter: 1122b00a9115SJed Brown . obj - object memory is logged to 1123ad0619ddSBarry Smith 1124ad0619ddSBarry Smith Output Parameter: 1125b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1126ad0619ddSBarry Smith 1127ad0619ddSBarry Smith Level: developer 1128ad0619ddSBarry Smith 1129390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1130ad0619ddSBarry Smith 1131ad0619ddSBarry Smith M*/ 1132d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1133d382aafbSBarry Smith 1134d382aafbSBarry Smith /*MC 1135d382aafbSBarry Smith PetscFree - Frees memory 1136d382aafbSBarry Smith 1137eca87e8dSBarry Smith Synopsis: 1138aaa7dc30SBarry Smith #include <petscsys.h> 1139eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1140eca87e8dSBarry Smith 1141eca87e8dSBarry Smith Not Collective 1142eca87e8dSBarry Smith 1143d382aafbSBarry Smith Input Parameter: 11447f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1145d382aafbSBarry Smith 1146d382aafbSBarry Smith Level: beginner 1147d382aafbSBarry Smith 114849d7da52SJed Brown Notes: 1149390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1150390e1bf2SBarry Smith 115149d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1152d382aafbSBarry Smith 1153390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1154d382aafbSBarry Smith 1155d382aafbSBarry Smith M*/ 1156ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1157d382aafbSBarry Smith 1158d382aafbSBarry Smith /*MC 1159d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1160d382aafbSBarry Smith 1161eca87e8dSBarry Smith Synopsis: 1162aaa7dc30SBarry Smith #include <petscsys.h> 1163eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1164eca87e8dSBarry Smith 1165eca87e8dSBarry Smith Not Collective 1166eca87e8dSBarry Smith 1167e28ce29aSPatrick Sanan Input Parameters: 1168d382aafbSBarry Smith + memory1 - memory to free 1169d382aafbSBarry Smith - memory2 - 2nd memory to free 1170d382aafbSBarry Smith 1171d382aafbSBarry Smith Level: developer 1172d382aafbSBarry Smith 117395452b02SPatrick Sanan Notes: 117495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1175d382aafbSBarry Smith 1176d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1177d382aafbSBarry Smith 1178d382aafbSBarry Smith M*/ 1179ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1180d382aafbSBarry Smith 1181d382aafbSBarry Smith /*MC 1182d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1183d382aafbSBarry Smith 1184eca87e8dSBarry Smith Synopsis: 1185aaa7dc30SBarry Smith #include <petscsys.h> 1186eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1187eca87e8dSBarry Smith 1188eca87e8dSBarry Smith Not Collective 1189eca87e8dSBarry Smith 1190e28ce29aSPatrick Sanan Input Parameters: 1191d382aafbSBarry Smith + memory1 - memory to free 1192d382aafbSBarry Smith . memory2 - 2nd memory to free 1193d382aafbSBarry Smith - memory3 - 3rd memory to free 1194d382aafbSBarry Smith 1195d382aafbSBarry Smith Level: developer 1196d382aafbSBarry Smith 119795452b02SPatrick Sanan Notes: 119895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1199d382aafbSBarry Smith 1200d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1201d382aafbSBarry Smith 1202d382aafbSBarry Smith M*/ 1203ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1204d382aafbSBarry Smith 1205d382aafbSBarry Smith /*MC 1206d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1207d382aafbSBarry Smith 1208eca87e8dSBarry Smith Synopsis: 1209aaa7dc30SBarry Smith #include <petscsys.h> 1210eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1211eca87e8dSBarry Smith 1212eca87e8dSBarry Smith Not Collective 1213eca87e8dSBarry Smith 1214e28ce29aSPatrick Sanan Input Parameters: 1215d382aafbSBarry Smith + m1 - memory to free 1216d382aafbSBarry Smith . m2 - 2nd memory to free 1217d382aafbSBarry Smith . m3 - 3rd memory to free 1218d382aafbSBarry Smith - m4 - 4th memory to free 1219d382aafbSBarry Smith 1220d382aafbSBarry Smith Level: developer 1221d382aafbSBarry Smith 122295452b02SPatrick Sanan Notes: 122395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1224d382aafbSBarry Smith 1225d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1226d382aafbSBarry Smith 1227d382aafbSBarry Smith M*/ 1228ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1229d382aafbSBarry Smith 1230d382aafbSBarry Smith /*MC 1231d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1232d382aafbSBarry Smith 1233eca87e8dSBarry Smith Synopsis: 1234aaa7dc30SBarry Smith #include <petscsys.h> 1235eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1236eca87e8dSBarry Smith 1237eca87e8dSBarry Smith Not Collective 1238eca87e8dSBarry Smith 1239e28ce29aSPatrick Sanan Input Parameters: 1240d382aafbSBarry Smith + m1 - memory to free 1241d382aafbSBarry Smith . m2 - 2nd memory to free 1242d382aafbSBarry Smith . m3 - 3rd memory to free 1243d382aafbSBarry Smith . m4 - 4th memory to free 1244d382aafbSBarry Smith - m5 - 5th memory to free 1245d382aafbSBarry Smith 1246d382aafbSBarry Smith Level: developer 1247d382aafbSBarry Smith 124895452b02SPatrick Sanan Notes: 124995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1250d382aafbSBarry Smith 1251d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1252d382aafbSBarry Smith 1253d382aafbSBarry Smith M*/ 1254ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1255d382aafbSBarry Smith 1256d382aafbSBarry Smith /*MC 1257d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1258d382aafbSBarry Smith 1259eca87e8dSBarry Smith Synopsis: 1260aaa7dc30SBarry Smith #include <petscsys.h> 1261eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1262eca87e8dSBarry Smith 1263eca87e8dSBarry Smith Not Collective 1264eca87e8dSBarry Smith 1265e28ce29aSPatrick Sanan Input Parameters: 1266d382aafbSBarry Smith + m1 - memory to free 1267d382aafbSBarry Smith . m2 - 2nd memory to free 1268d382aafbSBarry Smith . m3 - 3rd memory to free 1269d382aafbSBarry Smith . m4 - 4th memory to free 1270d382aafbSBarry Smith . m5 - 5th memory to free 1271d382aafbSBarry Smith - m6 - 6th memory to free 1272d382aafbSBarry Smith 1273d382aafbSBarry Smith Level: developer 1274d382aafbSBarry Smith 127595452b02SPatrick Sanan Notes: 127695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1277d382aafbSBarry Smith 1278d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1279d382aafbSBarry Smith 1280d382aafbSBarry Smith M*/ 1281ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1282d382aafbSBarry Smith 1283d382aafbSBarry Smith /*MC 1284d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1285d382aafbSBarry Smith 1286eca87e8dSBarry Smith Synopsis: 1287aaa7dc30SBarry Smith #include <petscsys.h> 1288eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1289eca87e8dSBarry Smith 1290eca87e8dSBarry Smith Not Collective 1291eca87e8dSBarry Smith 1292e28ce29aSPatrick Sanan Input Parameters: 1293d382aafbSBarry Smith + m1 - memory to free 1294d382aafbSBarry Smith . m2 - 2nd memory to free 1295d382aafbSBarry Smith . m3 - 3rd memory to free 1296d382aafbSBarry Smith . m4 - 4th memory to free 1297d382aafbSBarry Smith . m5 - 5th memory to free 1298d382aafbSBarry Smith . m6 - 6th memory to free 1299d382aafbSBarry Smith - m7 - 7th memory to free 1300d382aafbSBarry Smith 1301d382aafbSBarry Smith Level: developer 1302d382aafbSBarry Smith 130395452b02SPatrick Sanan Notes: 130495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1305d382aafbSBarry Smith 1306d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1307d382aafbSBarry Smith PetscMalloc7() 1308d382aafbSBarry Smith 1309d382aafbSBarry Smith M*/ 1310ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1311d382aafbSBarry Smith 1312ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1313ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1314071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1315efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 13163221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1317ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 131892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1320d382aafbSBarry Smith 1321d382aafbSBarry Smith /* 1322c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1323c1706be6SHong Zhang */ 1324c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1325c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 132631f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 132731f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 132831f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 132931f06eaaSHong Zhang #endif 133059af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 133159af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 133259af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 133359af0bd3SScott Kruger #endif 133459af0bd3SScott Kruger 1335a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 133636763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1337a5057860SBarry Smith 1338a5057860SBarry Smith /* 133966d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1340d382aafbSBarry Smith */ 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 134292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1345e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1346e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 134792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 134892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1349efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 135092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 135192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1352608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1353608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1354d382aafbSBarry Smith 13556a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13598e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1360d382aafbSBarry Smith 1361d382aafbSBarry Smith /* 1362d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1363d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1364d382aafbSBarry Smith functionality and/or error checking. 1365d382aafbSBarry Smith */ 1366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1368d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1376a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13802f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13852c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 138847340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13896fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13906991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13916991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1393d382aafbSBarry Smith 1394573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1395573b0fb4SBarry Smith 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1399d382aafbSBarry Smith 1400e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1401a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1402a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1403a53986e1SJed Brown 1404d382aafbSBarry Smith /* 1405d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1406d382aafbSBarry Smith */ 1407367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1408570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1409de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1410014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1411014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1412d9822059SBarry Smith #else 1413de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1414d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1415d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1416d9822059SBarry Smith #endif 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1418d382aafbSBarry Smith 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1421eb3f98d2SBarry Smith 142295c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1423d6a4318aSJed Brown 1424639ff905SBarry Smith /* 1425639ff905SBarry Smith Defines PETSc error handling. 1426639ff905SBarry Smith */ 1427639ff905SBarry Smith #include <petscerror.h> 1428d382aafbSBarry Smith 14290700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1430014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1431014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 143381256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 143481256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 143581256985SMatthew G. Knepley 1436d382aafbSBarry Smith /* 1437d382aafbSBarry Smith Routines that get memory usage information from the OS 1438d382aafbSBarry Smith */ 1439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1442b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1443d382aafbSBarry Smith 1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1445d382aafbSBarry Smith 1446d382aafbSBarry Smith /* 1447d382aafbSBarry Smith Initialization of PETSc 1448d382aafbSBarry Smith */ 1449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1459d382aafbSBarry Smith 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1461607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1462d382aafbSBarry Smith 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1467d382aafbSBarry Smith 1468a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1469a50e088cSMatthew G. Knepley 1470d382aafbSBarry Smith /* 1471d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14722981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1473d382aafbSBarry Smith */ 1474638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1475638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1476638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1477d382aafbSBarry Smith 1478d382aafbSBarry Smith /* 1479d382aafbSBarry Smith Functions that can act on any PETSc object. 1480d382aafbSBarry Smith */ 1481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1499bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1500bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 15030eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 15040eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1506d382aafbSBarry Smith 1507665c2dedSJed Brown #include <petscviewertypes.h> 1508639ff905SBarry Smith #include <petscoptions.h> 1509639ff905SBarry Smith 1510608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1511608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1512608c71bfSMatthew G. Knepley 15130633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 15140633abcbSJed Brown 1515c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1516dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1517639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 15180005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 15190005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1527685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15304099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1532b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1535d382aafbSBarry Smith 1536e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15377aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1538e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1539e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1540e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1541e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1542e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1543e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1544e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1545e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1546e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 154715681b3cSBarry Smith 1548ec7429eaSBarry Smith #else 15497aab2a10SBarry Smith #define PetscSAWsBlock() 0 1550e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1551e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1552e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1553e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1554e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1555e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1556e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1557e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1558e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 155915681b3cSBarry Smith 1560ec7429eaSBarry Smith #endif 1561b90c6cbeSBarry Smith 156282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 156382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 156482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1565258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1566258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1567258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1568258ec3d2SMatthew G. Knepley #endif 15697d5d4d99SBarry Smith 15705fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1571a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15725fe58b6fSBarry Smith #endif 15737eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1574a64a8e02SBarry Smith 1575140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1576140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1577140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1578140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1579140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1580140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1581d382aafbSBarry Smith 1582d382aafbSBarry Smith /* 1583503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1584d382aafbSBarry Smith link libraries that will be loaded as needed. 1585d382aafbSBarry Smith */ 1586a240a19fSJed Brown 1587a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1588a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1589140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15901c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15911c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 159244ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1593140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1594140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1595140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1596d382aafbSBarry Smith 1597014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1605d382aafbSBarry Smith 1606d382aafbSBarry Smith /* 1607d382aafbSBarry Smith Useful utility routines 1608d382aafbSBarry Smith */ 1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1611d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1616dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[2],PetscInt[2]); 1617dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[2],PetscReal[2]); 1618d382aafbSBarry Smith 161964ac3b0dSPatrick Sanan /*MC 1620ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1621503cfb0cSBarry Smith 1622e28ce29aSPatrick Sanan Notes: 1623e28ce29aSPatrick Sanan This is useful in cases like 1624503cfb0cSBarry Smith $ int *a; 1625ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 16261cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 162764ac3b0dSPatrick Sanan 162864ac3b0dSPatrick Sanan Level: beginner 162964ac3b0dSPatrick Sanan 163064ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 163164ac3b0dSPatrick Sanan M*/ 1632d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1633503cfb0cSBarry Smith 1634d382aafbSBarry Smith /*MC 1635d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1636d382aafbSBarry Smith 1637d382aafbSBarry Smith Synopsis: 1638aaa7dc30SBarry Smith #include <petscsys.h> 1639659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1640d382aafbSBarry Smith 1641659f7ba0SBarry Smith Collective on comm 1642eca87e8dSBarry Smith 1643d382aafbSBarry Smith Input Parameters: 1644659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1645d382aafbSBarry Smith . format - the usual printf() format string 1646659f7ba0SBarry Smith - args - arguments to be printed 1647d382aafbSBarry Smith 1648d382aafbSBarry Smith Level: developer 1649d382aafbSBarry Smith 1650d382aafbSBarry Smith Fortran Note: 1651d382aafbSBarry Smith This routine is not supported in Fortran. 1652d382aafbSBarry Smith 1653659f7ba0SBarry Smith Note: 1654659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1655659f7ba0SBarry Smith 1656659f7ba0SBarry Smith To use, write your own function, for example, 1657659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1658659f7ba0SBarry Smith ${ 1659659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1660659f7ba0SBarry Smith $} 1661659f7ba0SBarry Smith then do the assigment 1662659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1663659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1664659f7ba0SBarry Smith 1665659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1666d382aafbSBarry Smith 1667d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1668d382aafbSBarry Smith M*/ 1669014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1670d382aafbSBarry Smith 1671fcfd50ebSBarry Smith /* 1672fcfd50ebSBarry Smith Defines PETSc profiling. 1673fcfd50ebSBarry Smith */ 16742c8e378dSBarry Smith #include <petsclog.h> 1675fcfd50ebSBarry Smith 1676fcfd50ebSBarry Smith /* 1677fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1678fcfd50ebSBarry Smith */ 1679014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16861b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1687fcfd50ebSBarry Smith 1688014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1691d382aafbSBarry Smith 1692d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1693d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1694d781fa04SBarry Smith 1695d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1696014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1697016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 169874ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1699d382aafbSBarry Smith #endif 1700d382aafbSBarry Smith 1701014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1702014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 17030ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1704014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1705014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1706014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1707014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1708d382aafbSBarry Smith 1709014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1710014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1711014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1712014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1713014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1714014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1715b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1716d382aafbSBarry Smith 1717d382aafbSBarry Smith /* 1718d382aafbSBarry Smith For use in debuggers 1719d382aafbSBarry Smith */ 1720014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1721014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1722014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1723014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1724014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1725d382aafbSBarry Smith 1726a663daf8SBarry Smith #include <stddef.h> 1727a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1728d382aafbSBarry Smith #include <stdlib.h> 17296c7e564aSBarry Smith 17304a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1731d382aafbSBarry Smith #include <xmmintrin.h> 1732d382aafbSBarry Smith #endif 1733d382aafbSBarry Smith 1734d382aafbSBarry Smith /*@C 1735580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1736580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1737580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1738580bdb30SBarry Smith 1739580bdb30SBarry Smith Not Collective 1740580bdb30SBarry Smith 1741580bdb30SBarry Smith Input Parameters: 1742580bdb30SBarry Smith + b - pointer to initial memory space 1743580bdb30SBarry Smith . a - pointer to copy space 1744580bdb30SBarry Smith - n - length (in bytes) of space to copy 1745580bdb30SBarry Smith 1746580bdb30SBarry Smith Level: intermediate 1747580bdb30SBarry Smith 1748580bdb30SBarry Smith Note: 1749857a15f1SBarry Smith PetscArraymove() is preferred 1750580bdb30SBarry Smith This routine is analogous to memmove(). 1751580bdb30SBarry Smith 1752580bdb30SBarry Smith Developers Note: This is inlined for performance 1753580bdb30SBarry Smith 1754580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1755580bdb30SBarry Smith PetscArraymove() 1756580bdb30SBarry Smith @*/ 1757580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1758580bdb30SBarry Smith { 1759580bdb30SBarry Smith PetscFunctionBegin; 1760580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1761580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1762580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1763580bdb30SBarry Smith if (a < b) { 1764580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1765580bdb30SBarry Smith else { 1766580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1767580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1768580bdb30SBarry Smith } 1769580bdb30SBarry Smith } else { 1770580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1771580bdb30SBarry Smith else { 1772580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1773580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1774580bdb30SBarry Smith } 1775580bdb30SBarry Smith } 1776580bdb30SBarry Smith #else 1777580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1778580bdb30SBarry Smith #endif 1779580bdb30SBarry Smith PetscFunctionReturn(0); 1780580bdb30SBarry Smith } 1781580bdb30SBarry Smith 1782d382aafbSBarry Smith /*@C 1783d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1784d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1785d382aafbSBarry Smith PetscMemmove() in that case. 1786d382aafbSBarry Smith 1787d382aafbSBarry Smith Not Collective 1788d382aafbSBarry Smith 1789d382aafbSBarry Smith Input Parameters: 1790d382aafbSBarry Smith + b - pointer to initial memory space 1791d382aafbSBarry Smith - n - length (in bytes) of space to copy 1792d382aafbSBarry Smith 1793d382aafbSBarry Smith Output Parameter: 1794d382aafbSBarry Smith . a - pointer to copy space 1795d382aafbSBarry Smith 1796d382aafbSBarry Smith Level: intermediate 1797d382aafbSBarry Smith 1798d382aafbSBarry Smith Compile Option: 1799d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1800d382aafbSBarry Smith for memory copies on double precision values. 1801d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1802d382aafbSBarry Smith for memory copies on double precision values. 1803d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1804d382aafbSBarry Smith for memory copies on double precision values. 1805d382aafbSBarry Smith 1806d382aafbSBarry Smith Note: 1807580bdb30SBarry Smith Prefer PetscArraycpy() 1808d382aafbSBarry Smith This routine is analogous to memcpy(). 18091fd49c25SBarry Smith Not available from Fortran 18101fd49c25SBarry Smith 1811f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1812f5f57ec0SBarry Smith 1813580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1814d382aafbSBarry Smith 1815d382aafbSBarry Smith @*/ 18167087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1817d382aafbSBarry Smith { 1818d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1819c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1820c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1821a7e36092SMatthew G Knepley PetscFunctionBegin; 1822e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1823e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1824a7e36092SMatthew G Knepley #else 1825d382aafbSBarry Smith PetscFunctionBegin; 1826a7e36092SMatthew G Knepley #endif 1827a47a537aSLisandro Dalcin if (a != b && n > 0) { 1828d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1829e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1830d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1831d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1832d382aafbSBarry Smith #endif 1833d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1834c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1835d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1836d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1837c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1838c5df96a5SBarry Smith PetscErrorCode ierr; 1839c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18408b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1841d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1842d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1843d382aafbSBarry Smith #else 1844d382aafbSBarry Smith size_t i; 1845d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1846d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1847d382aafbSBarry Smith #endif 1848d382aafbSBarry Smith } else { 1849d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1850d382aafbSBarry Smith } 1851d382aafbSBarry Smith #else 1852d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1853d382aafbSBarry Smith #endif 1854d382aafbSBarry Smith } 1855d382aafbSBarry Smith PetscFunctionReturn(0); 1856d382aafbSBarry Smith } 1857d382aafbSBarry Smith 1858d382aafbSBarry Smith /*@C 1859d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1860d382aafbSBarry Smith 1861d382aafbSBarry Smith Not Collective 1862d382aafbSBarry Smith 1863d382aafbSBarry Smith Input Parameters: 1864d382aafbSBarry Smith + a - pointer to beginning memory location 1865d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1866d382aafbSBarry Smith 1867d382aafbSBarry Smith Level: intermediate 1868d382aafbSBarry Smith 1869d382aafbSBarry Smith Compile Option: 1870d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1871d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1872d382aafbSBarry Smith 18731fd49c25SBarry Smith Not available from Fortran 1874857a15f1SBarry Smith Prefer PetscArrayzero() 18751fd49c25SBarry Smith 1876503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1877503cfb0cSBarry Smith 1878580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1879d382aafbSBarry Smith @*/ 18807087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1881d382aafbSBarry Smith { 1882d382aafbSBarry Smith if (n > 0) { 1883d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 188418703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1885d382aafbSBarry Smith #endif 1886d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1887d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1888d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1889d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1890d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1891d382aafbSBarry Smith } else { 1892d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1893d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1894d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1895d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1896d382aafbSBarry Smith } else { 1897d382aafbSBarry Smith #endif 1898d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1899d382aafbSBarry Smith bzero((char *)a,n); 1900d382aafbSBarry Smith #else 1901d382aafbSBarry Smith memset((char*)a,0,n); 1902d382aafbSBarry Smith #endif 1903d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1904d382aafbSBarry Smith } 1905d382aafbSBarry Smith #endif 1906d382aafbSBarry Smith } 1907d382aafbSBarry Smith return 0; 1908d382aafbSBarry Smith } 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith /*MC 1911580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1912580bdb30SBarry Smith 1913580bdb30SBarry Smith Synopsis: 1914580bdb30SBarry Smith #include <petscsys.h> 1915580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1916580bdb30SBarry Smith 1917580bdb30SBarry Smith Not Collective 1918580bdb30SBarry Smith 1919580bdb30SBarry Smith Input Parameters: 1920580bdb30SBarry Smith + str1 - First array 1921580bdb30SBarry Smith . str2 - Second array 1922580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1923580bdb30SBarry Smith 1924580bdb30SBarry Smith Output Parameters: 1925580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1926580bdb30SBarry Smith 1927580bdb30SBarry Smith Level: intermediate 1928580bdb30SBarry Smith 1929580bdb30SBarry Smith Note: 1930857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1931580bdb30SBarry Smith The arrays must be of the same type 1932580bdb30SBarry Smith 1933580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1934580bdb30SBarry Smith PetscArraymove() 1935580bdb30SBarry Smith M*/ 19369e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1937580bdb30SBarry Smith 19388f8f2f0dSBarry Smith /*MC 1939580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1940580bdb30SBarry Smith do not overlap 1941580bdb30SBarry Smith 1942580bdb30SBarry Smith Synopsis: 1943580bdb30SBarry Smith #include <petscsys.h> 1944580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1945580bdb30SBarry Smith 1946580bdb30SBarry Smith Not Collective 1947580bdb30SBarry Smith 1948580bdb30SBarry Smith Input Parameters: 1949580bdb30SBarry Smith + str1 - First array 1950580bdb30SBarry Smith . str2 - Second array 1951580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1952580bdb30SBarry Smith 1953580bdb30SBarry Smith Level: intermediate 1954580bdb30SBarry Smith 1955580bdb30SBarry Smith Note: 1956857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1957580bdb30SBarry Smith The arrays must be of the same type 1958580bdb30SBarry Smith 1959580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1960580bdb30SBarry Smith M*/ 19619e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1962580bdb30SBarry Smith 19638f8f2f0dSBarry Smith /*MC 1964580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1965580bdb30SBarry Smith 1966580bdb30SBarry Smith Synopsis: 1967580bdb30SBarry Smith #include <petscsys.h> 1968580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1969580bdb30SBarry Smith 1970580bdb30SBarry Smith Not Collective 1971580bdb30SBarry Smith 1972580bdb30SBarry Smith Input Parameters: 1973de25709eSStefano Zampini + str1 - First array (destination) 1974de25709eSStefano Zampini . str2 - Second array (source) 1975580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1976580bdb30SBarry Smith 1977580bdb30SBarry Smith Level: intermediate 1978580bdb30SBarry Smith 1979580bdb30SBarry Smith Note: 1980857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1981580bdb30SBarry Smith The arrays must be of the same type 1982580bdb30SBarry Smith 1983580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1984580bdb30SBarry Smith M*/ 19859e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1986580bdb30SBarry Smith 19878f8f2f0dSBarry Smith /*MC 1988580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1989580bdb30SBarry Smith 1990580bdb30SBarry Smith Synopsis: 1991580bdb30SBarry Smith #include <petscsys.h> 1992580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1993580bdb30SBarry Smith 1994580bdb30SBarry Smith Not Collective 1995580bdb30SBarry Smith 1996580bdb30SBarry Smith Input Parameters: 1997580bdb30SBarry Smith + str1 - array 1998580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1999580bdb30SBarry Smith 2000580bdb30SBarry Smith Level: intermediate 2001580bdb30SBarry Smith 2002580bdb30SBarry Smith Note: 2003857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 2004580bdb30SBarry Smith 2005580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 2006580bdb30SBarry Smith M*/ 20079e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 2008580bdb30SBarry Smith 2009d382aafbSBarry Smith /*MC 2010d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 2011d382aafbSBarry Smith 2012eca87e8dSBarry Smith Synopsis: 2013aaa7dc30SBarry Smith #include <petscsys.h> 2014eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 2015eca87e8dSBarry Smith 2016d382aafbSBarry Smith Not Collective 2017d382aafbSBarry Smith 2018d382aafbSBarry Smith Input Parameters: 2019d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 2020d382aafbSBarry Smith . n - number of elements to fetch 2021d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 202250d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2023d382aafbSBarry Smith 2024d382aafbSBarry Smith Level: developer 2025d382aafbSBarry Smith 2026d382aafbSBarry Smith Notes: 2027d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2028d382aafbSBarry Smith 202950d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 203050d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 203150d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 203263cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 203363cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 203463cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2035d382aafbSBarry Smith 2036d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2037d382aafbSBarry Smith address). 2038d382aafbSBarry Smith 2039d382aafbSBarry Smith M*/ 2040d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2041d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2042d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2043d382aafbSBarry Smith } while (0) 2044d382aafbSBarry Smith 2045d382aafbSBarry Smith /* 2046d382aafbSBarry Smith Determine if some of the kernel computation routines use 2047d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2048d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2049d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2050e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2051d382aafbSBarry Smith */ 2052d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2053d382aafbSBarry Smith 2054d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2055d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2056d382aafbSBarry Smith #endif 2057d382aafbSBarry Smith 20585a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20595a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2060d382aafbSBarry Smith #endif 2061d382aafbSBarry Smith 2062d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2063d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2064d382aafbSBarry Smith #endif 2065d382aafbSBarry Smith 2066d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2067d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2068d382aafbSBarry Smith #endif 2069d382aafbSBarry Smith 2070d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2071d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2072d382aafbSBarry Smith #endif 2073d382aafbSBarry Smith 2074d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2075d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2076d382aafbSBarry Smith #endif 2077d382aafbSBarry Smith 2078d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2079d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2080d382aafbSBarry Smith #endif 2081d382aafbSBarry Smith 2082d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2083d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2084d382aafbSBarry Smith #endif 2085d382aafbSBarry Smith 2086d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2087d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2088d382aafbSBarry Smith #endif 2089d382aafbSBarry Smith 2090d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2091d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2092d382aafbSBarry Smith #endif 2093d382aafbSBarry Smith 2094d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2095d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2096d382aafbSBarry Smith #endif 2097d382aafbSBarry Smith 2098d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2099d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2100d382aafbSBarry Smith #endif 2101d382aafbSBarry Smith 2102d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2103d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2104d382aafbSBarry Smith #endif 2105d382aafbSBarry Smith 2106d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2107d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2108d382aafbSBarry Smith #endif 2109d382aafbSBarry Smith 2110d382aafbSBarry Smith #endif 2111d382aafbSBarry Smith 2112d382aafbSBarry Smith /* 2113d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2114d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2115d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2116d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2117d382aafbSBarry Smith ugly extern "C" {} wrappers. 2118d382aafbSBarry Smith */ 2119d382aafbSBarry Smith #if defined(__cplusplus) 2120d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2121d382aafbSBarry Smith # define EXTERN_C_END } 2122d382aafbSBarry Smith #else 2123d382aafbSBarry Smith # define EXTERN_C_BEGIN 2124d382aafbSBarry Smith # define EXTERN_C_END 2125d382aafbSBarry Smith #endif 2126d382aafbSBarry Smith 2127d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2128d382aafbSBarry Smith 2129d382aafbSBarry Smith /*MC 2130d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2131d382aafbSBarry Smith communication 2132d382aafbSBarry Smith 2133d382aafbSBarry Smith Level: beginner 2134d382aafbSBarry Smith 2135d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2136d382aafbSBarry Smith 2137d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2138d382aafbSBarry Smith M*/ 2139d382aafbSBarry Smith 2140d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2141014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2142014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2143c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2144c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2145c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2146c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2147d382aafbSBarry Smith #endif 2148d382aafbSBarry Smith 2149d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2150d382aafbSBarry Smith 2151d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2152d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2153d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2154d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2155d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2156d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2157eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 2158d382aafbSBarry Smith 215961b0d812SBarry Smith /*@C 2160c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2161c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2162c73702f5SBarry Smith 2163c73702f5SBarry Smith Not Collective 2164c73702f5SBarry Smith 2165c73702f5SBarry Smith Input Parameter: 2166c73702f5SBarry Smith . a - the PetscInt64 value 2167c73702f5SBarry Smith 2168c73702f5SBarry Smith Output Parameter: 2169c73702f5SBarry Smith . b - the resulting PetscInt value 2170c73702f5SBarry Smith 2171c73702f5SBarry Smith Level: advanced 2172c73702f5SBarry Smith 2173c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2174c73702f5SBarry Smith 2175c73702f5SBarry Smith Not available from Fortran 2176c73702f5SBarry Smith 217761778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2178c73702f5SBarry Smith @*/ 2179c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2180c73702f5SBarry Smith { 2181c73702f5SBarry Smith PetscFunctionBegin; 2182c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2183e9e21dffSJose E. Roman if (a > PETSC_MAX_INT) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); } 2184c73702f5SBarry Smith #endif 2185c73702f5SBarry Smith *b = (PetscInt)(a); 2186c73702f5SBarry Smith PetscFunctionReturn(0); 2187c73702f5SBarry Smith } 2188c73702f5SBarry Smith 2189c73702f5SBarry Smith /*@C 219061b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 219161b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 219261b0d812SBarry Smith 219361b0d812SBarry Smith Not Collective 219461b0d812SBarry Smith 219561b0d812SBarry Smith Input Parameter: 219661b0d812SBarry Smith . a - the PetscInt value 219761b0d812SBarry Smith 219861b0d812SBarry Smith Output Parameter: 219961b0d812SBarry Smith . b - the resulting PetscBLASInt value 220061b0d812SBarry Smith 220161b0d812SBarry Smith Level: advanced 220261b0d812SBarry Smith 22030bc7d38cSBarry Smith Notes: 22041fd49c25SBarry Smith Not available from Fortran 2205f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 22061fd49c25SBarry Smith 2207c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 220861b0d812SBarry Smith @*/ 2209c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2210c5df96a5SBarry Smith { 2211c5df96a5SBarry Smith PetscFunctionBegin; 2212c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2213e9e21dffSJose E. Roman if (a > PETSC_BLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running",a); } 2214c5df96a5SBarry Smith #endif 2215e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); } 2216c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2217c5df96a5SBarry Smith PetscFunctionReturn(0); 2218c5df96a5SBarry Smith } 2219c5df96a5SBarry Smith 222061b0d812SBarry Smith /*@C 2221eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2222eee0c0a6SToby Isaac 2223eee0c0a6SToby Isaac Not Collective 2224eee0c0a6SToby Isaac 2225eee0c0a6SToby Isaac Input Parameter: 2226eee0c0a6SToby Isaac . a - the PetscInt value 2227eee0c0a6SToby Isaac 2228eee0c0a6SToby Isaac Output Parameter: 2229eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2230eee0c0a6SToby Isaac 2231eee0c0a6SToby Isaac Level: advanced 2232eee0c0a6SToby Isaac 2233eee0c0a6SToby Isaac Notes: 2234eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2235eee0c0a6SToby Isaac 2236eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2237eee0c0a6SToby Isaac @*/ 2238ae77d22fSJunchao Zhang PETSC_STATIC_INLINE PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscCuBLASInt *b) 2239eee0c0a6SToby Isaac { 2240eee0c0a6SToby Isaac PetscFunctionBegin; 2241eee0c0a6SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 2242e9e21dffSJose E. Roman if (a > PETSC_CUBLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for cuBLAS, which is restricted to 32 bit integers.",a); } 2243eee0c0a6SToby Isaac #endif 2244e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); } 2245eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2246eee0c0a6SToby Isaac PetscFunctionReturn(0); 2247eee0c0a6SToby Isaac } 2248eee0c0a6SToby Isaac 2249eee0c0a6SToby Isaac /*@C 225061b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 225161b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 225261b0d812SBarry Smith 225361b0d812SBarry Smith Not Collective 225461b0d812SBarry Smith 225561b0d812SBarry Smith Input Parameter: 225661b0d812SBarry Smith . a - the PetscInt value 225761b0d812SBarry Smith 225861b0d812SBarry Smith Output Parameter: 225961b0d812SBarry Smith . b - the resulting PetscMPIInt value 226061b0d812SBarry Smith 226161b0d812SBarry Smith Level: advanced 226261b0d812SBarry Smith 22631fd49c25SBarry Smith Not available from Fortran 22641fd49c25SBarry Smith 2265c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 226661b0d812SBarry Smith @*/ 22674dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22684dc2109aSBarry Smith { 22694dc2109aSBarry Smith PetscFunctionBegin; 22704dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2271e9e21dffSJose E. Roman if (a > PETSC_MPI_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for MPI buffer length. We currently only support 32 bit integers",a); } 22724dc2109aSBarry Smith #endif 2273c73702f5SBarry Smith *b = (PetscMPIInt)(a); 22744dc2109aSBarry Smith PetscFunctionReturn(0); 22754dc2109aSBarry Smith } 22764dc2109aSBarry Smith 2277bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 22782f18eb33SBarry Smith 22792f18eb33SBarry Smith /*@C 22802f18eb33SBarry Smith 22812f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22822f18eb33SBarry Smith 22832f18eb33SBarry Smith Not Collective 22842f18eb33SBarry Smith 2285d8d19677SJose E. Roman Input Parameters: 22862f18eb33SBarry Smith + a - the PetscReal value 22872f18eb33SBarry Smith - b - the second value 22882f18eb33SBarry Smith 2289390e1bf2SBarry Smith Returns: 2290390e1bf2SBarry Smith the result as a PetscInt value 22912f18eb33SBarry Smith 2292bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22932f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22942f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22952f18eb33SBarry Smith 2296e28ce29aSPatrick Sanan Developers Note: 2297e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22982f18eb33SBarry Smith 22992f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23002f18eb33SBarry Smith 23011fd49c25SBarry Smith Not available from Fortran 23021fd49c25SBarry Smith 23032f18eb33SBarry Smith Level: advanced 23042f18eb33SBarry Smith 230561778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23062f18eb33SBarry Smith @*/ 23072f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 23082f18eb33SBarry Smith { 2309bafee8b4SSatish Balay PetscInt64 r; 23102f18eb33SBarry Smith 2311bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 23122f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23132f18eb33SBarry Smith return (PetscInt) r; 23142f18eb33SBarry Smith } 23152f18eb33SBarry Smith 23162f18eb33SBarry Smith /*@C 23172f18eb33SBarry Smith 23182f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23192f18eb33SBarry Smith 23202f18eb33SBarry Smith Not Collective 23212f18eb33SBarry Smith 2322d8d19677SJose E. Roman Input Parameters: 23232f18eb33SBarry Smith + a - the PetscInt value 23242f18eb33SBarry Smith - b - the second value 23252f18eb33SBarry Smith 2326390e1bf2SBarry Smith Returns: 2327390e1bf2SBarry Smith the result as a PetscInt value 23282f18eb33SBarry Smith 2329bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23302f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23312f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23322f18eb33SBarry Smith 23331fd49c25SBarry Smith Not available from Fortran 23341fd49c25SBarry Smith 23352f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23362f18eb33SBarry Smith 23372f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23382f18eb33SBarry Smith 23392f18eb33SBarry Smith Level: advanced 23402f18eb33SBarry Smith 234161778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23422f18eb33SBarry Smith @*/ 23432f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23442f18eb33SBarry Smith { 2345bafee8b4SSatish Balay PetscInt64 r; 23462f18eb33SBarry Smith 2347bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23482f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23492f18eb33SBarry Smith return (PetscInt) r; 23502f18eb33SBarry Smith } 23512f18eb33SBarry Smith 2352f91af8c7SBarry Smith /*@C 2353f91af8c7SBarry Smith 2354f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2355f91af8c7SBarry Smith 2356f91af8c7SBarry Smith Not Collective 2357f91af8c7SBarry Smith 2358d8d19677SJose E. Roman Input Parameters: 2359f91af8c7SBarry Smith + a - the PetscInt value 2360f91af8c7SBarry Smith - b - the second value 2361f91af8c7SBarry Smith 2362390e1bf2SBarry Smith Returns: 2363390e1bf2SBarry Smith the result as a PetscInt value 2364f91af8c7SBarry Smith 2365bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2366f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2367f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2368f91af8c7SBarry Smith 2369f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2370f91af8c7SBarry Smith 2371f5f57ec0SBarry Smith Not available from Fortran 2372f5f57ec0SBarry Smith 2373f91af8c7SBarry Smith Level: advanced 2374f91af8c7SBarry Smith 237561778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2376f91af8c7SBarry Smith @*/ 2377f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2378f91af8c7SBarry Smith { 2379bafee8b4SSatish Balay PetscInt64 r; 2380f91af8c7SBarry Smith 2381bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2382f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2383f91af8c7SBarry Smith return (PetscInt) r; 2384f91af8c7SBarry Smith } 2385f91af8c7SBarry Smith 23862f18eb33SBarry Smith /*@C 23872f18eb33SBarry Smith 23882f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23892f18eb33SBarry Smith 23902f18eb33SBarry Smith Not Collective 23912f18eb33SBarry Smith 2392d8d19677SJose E. Roman Input Parameters: 23932f18eb33SBarry Smith + a - the PetscInt value 23942f18eb33SBarry Smith - b - the second value 23952f18eb33SBarry Smith 2396d8d19677SJose E. Roman Output Parameter: 2397390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 23982f18eb33SBarry Smith 2399bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 24002f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 24012f18eb33SBarry Smith 2402f5f57ec0SBarry Smith Not available from Fortran 2403f5f57ec0SBarry Smith 2404220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 24052f18eb33SBarry Smith 24062f18eb33SBarry Smith Level: advanced 24072f18eb33SBarry Smith 2408220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 24092f18eb33SBarry Smith @*/ 24102f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 24112f18eb33SBarry Smith { 2412bafee8b4SSatish Balay PetscInt64 r; 24132f18eb33SBarry Smith 24142f18eb33SBarry Smith PetscFunctionBegin; 2415bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 24162f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 241761778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 24182f18eb33SBarry Smith #endif 2419f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2420f91af8c7SBarry Smith PetscFunctionReturn(0); 2421f91af8c7SBarry Smith } 2422f91af8c7SBarry Smith 2423f91af8c7SBarry Smith /*@C 2424f91af8c7SBarry Smith 2425fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2426f91af8c7SBarry Smith 2427f91af8c7SBarry Smith Not Collective 2428f91af8c7SBarry Smith 2429d8d19677SJose E. Roman Input Parameters: 2430f91af8c7SBarry Smith + a - the PetscInt value 2431f91af8c7SBarry Smith - b - the second value 2432f91af8c7SBarry Smith 2433d8d19677SJose E. Roman Output Parameter: 2434390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2435f91af8c7SBarry Smith 2436bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2437f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2438f91af8c7SBarry Smith 2439f5f57ec0SBarry Smith Not available from Fortran 2440f5f57ec0SBarry Smith 2441f91af8c7SBarry Smith Level: advanced 2442f91af8c7SBarry Smith 244361778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2444f91af8c7SBarry Smith @*/ 2445f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2446f91af8c7SBarry Smith { 2447bafee8b4SSatish Balay PetscInt64 r; 2448f91af8c7SBarry Smith 2449f91af8c7SBarry Smith PetscFunctionBegin; 2450bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2451f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 245261778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2453f91af8c7SBarry Smith #endif 2454f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 24552f18eb33SBarry Smith PetscFunctionReturn(0); 24562f18eb33SBarry Smith } 2457c5df96a5SBarry Smith 2458d382aafbSBarry Smith /* 24592981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2460d382aafbSBarry Smith */ 2461d382aafbSBarry Smith #if defined(hz) 2462d382aafbSBarry Smith # undef hz 2463d382aafbSBarry Smith #endif 2464d382aafbSBarry Smith 246515a5570dSLisandro Dalcin #include <limits.h> 246615a5570dSLisandro Dalcin 246715a5570dSLisandro Dalcin /* The number of bits in a byte */ 246815a5570dSLisandro Dalcin 246915a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 247015a5570dSLisandro Dalcin 2471d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2472d382aafbSBarry Smith # include <sys/types.h> 2473d382aafbSBarry Smith #endif 2474d382aafbSBarry Smith 2475d382aafbSBarry Smith /*MC 2476d382aafbSBarry Smith 247766d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 247866d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 247966d79e26SBarry Smith 248066d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 248166d79e26SBarry Smith 248266d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 248366d79e26SBarry Smith 248466d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 248566d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 248666d79e26SBarry Smith 248766d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 248866d79e26SBarry Smith 248966d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 249066d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 249166d79e26SBarry Smith version number (x.y.z). 249266d79e26SBarry Smith 249366d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 249466d79e26SBarry Smith 249566d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 249666d79e26SBarry Smith 249766d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 249866d79e26SBarry Smith 249966d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 250066d79e26SBarry Smith 250166d79e26SBarry Smith Level: intermediate 250266d79e26SBarry Smith 250366d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 250466d79e26SBarry Smith 250566d79e26SBarry Smith M*/ 250666d79e26SBarry Smith 2507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 251327710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 25145f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2515d382aafbSBarry Smith 25166a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 25176a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 25186a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2520ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 252122ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2523f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 252460e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2525d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 25296c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 253017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 253117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25335569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 253517df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 253739f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2539745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 254039f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 25446c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 25456c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2546e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2547ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2548ce605777SToby Isaac 25494d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2550676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2551676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2552676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 25534d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2554676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2555676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2556676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2557676f2a66SJacob Faibussowitsch 2558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2560d382aafbSBarry Smith 256176bdecfbSBarry Smith /*J 2562d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2563d382aafbSBarry Smith 2564d382aafbSBarry Smith Level: beginner 2565d382aafbSBarry Smith 2566e28ce29aSPatrick Sanan Notes: 2567e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 256825ccb61fSToby Isaac with the option --download-sprng or --download-random123 2569d382aafbSBarry Smith 25708f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 257176bdecfbSBarry Smith J*/ 257219fd82e9SBarry Smith typedef const char* PetscRandomType; 2573d382aafbSBarry Smith #define PETSCRAND "rand" 2574d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2575d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2576c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 257725ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2578808ba619SStefano Zampini #define PETSCCURAND "curand" 2579d382aafbSBarry Smith 2580d382aafbSBarry Smith /* Logging support */ 2581014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2582d382aafbSBarry Smith 2583607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2584d382aafbSBarry Smith 2585d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2586140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2587d382aafbSBarry Smith 2588bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 258919fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 259119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2592fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2594d382aafbSBarry Smith 2595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2598808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2599808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2606d382aafbSBarry Smith 2607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 261497540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 26158a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 261697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2617d382aafbSBarry Smith 261830815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 261930815ce0SLisandro Dalcin 26209860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 26219860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2622f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2623f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2631c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2632e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2633c891a504SStefano Zampini #endif 2634d382aafbSBarry Smith 2635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2638d382aafbSBarry Smith 2639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2643014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2644014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 26452a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2646d382aafbSBarry Smith 2647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2652cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2653cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2654d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2655d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2656d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2657d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 26586afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 26596afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26606afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26616afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26626afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2663d382aafbSBarry Smith 26646145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26656145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26666145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26676145cd65SJed Brown 2668014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2669d382aafbSBarry Smith 2670ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2671ce94432eSBarry Smith 267245487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 267345487dadSJed Brown 2674d382aafbSBarry Smith struct _n_PetscSubcomm { 2675d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2676d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2677306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 267845487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 267945487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2680708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 268145487dadSJed Brown PetscSubcommType type; 2682e5acf8a4SHong Zhang char *subcommprefix; 2683d382aafbSBarry Smith }; 2684d382aafbSBarry Smith 2685c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2686306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 268736be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2688014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 269265d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2693053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2694f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2695e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2696a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2697a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2698a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2699d382aafbSBarry Smith 27009962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 27019962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 27029962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 27039962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 27049962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 27059962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 27069962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 27079962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 27089962606eSBarry Smith 27095e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 27105f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 27115f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27125f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27135f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 27145e71baefSBarry Smith 2715a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2716a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2717a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2718a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2719a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2720a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2721a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2722a32e93adSJunchao Zhang 272313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 27240f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 272513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2726137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2727137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2728137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 272913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 273013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 27310f453b92SJed Brown 2732471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2733471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2734471ecdacSJed Brown * possible. */ 27356a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2736d382aafbSBarry Smith 27379de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27389de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27399de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27409de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27419de0f6ecSBarry Smith 2742ace2fbaeSBarry Smith #include <stdarg.h> 2743ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2744ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2745ace2fbaeSBarry Smith 2746268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2747fbfcfee5SBarry Smith 27481f817a21SBarry Smith /*@C 27491f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 27501f817a21SBarry Smith 27511f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 27521f817a21SBarry Smith 27531f817a21SBarry Smith Input Parameters: 27541f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 27551f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 27561f817a21SBarry Smith 2757850545d0SSatish Balay Level: intermediate 2758850545d0SSatish Balay 2759f5f57ec0SBarry Smith Not available from Fortran 2760f5f57ec0SBarry Smith 27611f817a21SBarry Smith Options Database: 2762063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27631f817a21SBarry Smith @*/ 2764dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2765dff31646SBarry Smith { 2766dff31646SBarry Smith size_t len; 2767dff31646SBarry Smith char *vstring; 2768dff31646SBarry Smith PetscErrorCode ierr; 2769dff31646SBarry Smith 27701f817a21SBarry Smith PetscFunctionBegin; 27718d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2772dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 277335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2774580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2775dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27761f817a21SBarry Smith PetscFunctionReturn(0); 2777dff31646SBarry Smith } 2778dff31646SBarry Smith 2779b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2780fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2781fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2782f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2783fe278a28SBarry Smith 2784f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2785f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2786b967cddfSBarry Smith 27879f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27889f4d3c52SBarry Smith 278904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2790763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2791dff31646SBarry Smith 279268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27935dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2794d382aafbSBarry Smith 2795b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2796503e1a2cSLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscStrHash(const char *str) 2797df05ca09SBarry Smith { 2798df05ca09SBarry Smith unsigned int c,hash = 5381; 2799df05ca09SBarry Smith 2800503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2801df05ca09SBarry Smith return hash; 2802df05ca09SBarry Smith } 280377a5e07dSBarry Smith 280477a5e07dSBarry Smith /*MC 280577a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 280677a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 280777a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 280877a5e07dSBarry Smith 2809d083f849SBarry Smith Collective 281077a5e07dSBarry Smith 281177a5e07dSBarry Smith Synopsis: 281277a5e07dSBarry Smith #include <petscsys.h> 281377a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 281477a5e07dSBarry Smith 281577a5e07dSBarry Smith Input Parameters: 2816df05ca09SBarry Smith + a - pointer to the input data to be reduced 2817df05ca09SBarry Smith . c - the number of MPI data items in a and b 2818df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2819df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2820df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 282177a5e07dSBarry Smith 282277a5e07dSBarry Smith Output Parameter: 2823df05ca09SBarry Smith . b - the reduced values 282477a5e07dSBarry Smith 2825e28ce29aSPatrick Sanan Notes: 2826e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 282777a5e07dSBarry Smith 2828df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2829df05ca09SBarry Smith 2830df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2831df05ca09SBarry Smith 283277a5e07dSBarry Smith Level: developer 283377a5e07dSBarry Smith 283477a5e07dSBarry Smith .seealso: MPI_Allreduce() 283577a5e07dSBarry Smith M*/ 2836df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do {\ 2837df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2838df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6];\ 2839df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2840df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2841df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2842df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 2843df05ca09SBarry Smith if (-a_b2[0] != a_b2[1]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 2844df05ca09SBarry Smith if (-a_b2[2] != a_b2[3]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 2845df05ca09SBarry Smith if (-a_b2[4] != a_b2[5]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",c);\ 2846df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2847df05ca09SBarry Smith } while (0) 2848b2566f29SBarry Smith #else 2849df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2850b2566f29SBarry Smith #endif 2851b2566f29SBarry Smith 2852b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 28538198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 28548198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 28552f065d89SBarry Smith #endif 28568198064fSBarry Smith 2857cd88fca5SStefano Zampini /* this is a vile hack */ 2858cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 2859cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0); 2860cd88fca5SStefano Zampini #endif 2861cd88fca5SStefano Zampini 286212801b39SBarry Smith /* 286360fbe2beSVaclav Hapla List of external packages and queries on it 286460fbe2beSVaclav Hapla */ 286560fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 286660fbe2beSVaclav Hapla 2867d382aafbSBarry Smith #endif 2868