xref: /petsc/include/petscsys.h (revision 0acecf5b219ee53b120d9c256e0d3f39d2de871a)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
112981ebdbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/
122981ebdbSBarry Smith    does not exist and petscconf.h is in the same directory as the other PETSc include files.
13d382aafbSBarry Smith */
142c8e378dSBarry Smith #include <petscconf.h>
152c8e378dSBarry Smith #include <petscfix.h>
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
29ea0fecefSShri Abhyankar #define _GNU_SOURCE
30ea0fecefSShri Abhyankar #endif
3173fca5a0SBarry Smith #endif
3273fca5a0SBarry Smith 
33d382aafbSBarry Smith /* ========================================================================== */
34d382aafbSBarry Smith /*
352c280183SJed Brown    This facilitates using the C version of PETSc from C++ and the C++ version from C.
36d382aafbSBarry Smith */
371ec50b02SJed Brown #if defined(__cplusplus)
381ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
391ec50b02SJed Brown #else
401ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
411ec50b02SJed Brown #endif
42d382aafbSBarry Smith 
43ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */
44014dd563SJed Brown #  define PETSC_DLLEXPORT __declspec(dllexport)
45014dd563SJed Brown #  define PETSC_DLLIMPORT __declspec(dllimport)
4621f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL
47014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY)
48014dd563SJed Brown #  define PETSC_DLLEXPORT __attribute__((visibility ("default")))
49014dd563SJed Brown #  define PETSC_DLLIMPORT __attribute__((visibility ("default")))
5021f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden")))
51d382aafbSBarry Smith #else
52014dd563SJed Brown #  define PETSC_DLLEXPORT
53014dd563SJed Brown #  define PETSC_DLLIMPORT
5421f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL
55014dd563SJed Brown #endif
56014dd563SJed Brown 
57014dd563SJed Brown #if defined(petsc_EXPORTS)      /* CMake defines this when building the shared library */
58014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT
59014dd563SJed Brown #else  /* Win32 users need this to import symbols from petsc.dll */
60014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT
61014dd563SJed Brown #endif
62014dd563SJed Brown 
632c280183SJed Brown #if defined(__cplusplus)
64014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC
65638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C"
6621f66b81SJed Brown #define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL
67014dd563SJed Brown #else
68014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
69638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF
706258c452SJed Brown #define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL
71d382aafbSBarry Smith #endif
7227710113SBarry Smith 
732c8e378dSBarry Smith #include <petscversion.h>
74301d30feSBarry Smith #define PETSC_AUTHOR_INFO  "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
75d382aafbSBarry Smith 
76d382aafbSBarry Smith /* ========================================================================== */
77d382aafbSBarry Smith 
78d382aafbSBarry Smith /*
79d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
82d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
83d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
84d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
85d382aafbSBarry Smith     mpicxx.h directly in their code
86d382aafbSBarry Smith */
87d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
88d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
892c8e378dSBarry Smith #include <mpi.h>
9065013866SBarry Smith 
91d382aafbSBarry Smith /*
922981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
93d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
94d382aafbSBarry Smith */
95d382aafbSBarry Smith #include <stdio.h>
96d382aafbSBarry Smith 
97d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
98d382aafbSBarry Smith #if !defined(MPIAPI)
99d382aafbSBarry Smith #define MPIAPI
100d382aafbSBarry Smith #endif
101d382aafbSBarry Smith 
102894dd566SJed Brown /* Support for Clang (>=3.2) matching type tag arguments with void* buffer types */
103894dd566SJed Brown #if defined(__has_attribute)
104894dd566SJed Brown #  if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype)
105894dd566SJed Brown #    define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno)))
1068ad47952SJed Brown #    define PetscAttrMPITypeTag(type)                 __attribute__((type_tag_for_datatype(MPI,type)))
1078ad47952SJed Brown #    define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible)))
108894dd566SJed Brown #  endif
109894dd566SJed Brown #endif
110894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType)
111894dd566SJed Brown #  define PetscAttrMPIPointerWithType(bufno,typeno)
1128ad47952SJed Brown #  define PetscAttrMPITypeTag(type)
1138ad47952SJed Brown #  define PetscAttrMPITypeTagLayoutCompatible(type)
114894dd566SJed Brown #endif
115b3506946SBarry Smith 
116d382aafbSBarry Smith /*MC
117d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
118d382aafbSBarry Smith 
119d382aafbSBarry Smith     Level: beginner
120d382aafbSBarry Smith 
121d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
122d382aafbSBarry Smith M*/
123d382aafbSBarry Smith typedef int PetscErrorCode;
124d382aafbSBarry Smith 
125d382aafbSBarry Smith /*MC
126d382aafbSBarry Smith 
127503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
128d382aafbSBarry Smith          (internal integer in the data structure used for error
1292981ebdbSBarry Smith          checking). These are all computed by an offset from the lowest
1300700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
131d382aafbSBarry Smith 
132d382aafbSBarry Smith     Level: advanced
133d382aafbSBarry Smith 
1340700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
135d382aafbSBarry Smith M*/
1360700a824SBarry Smith typedef int PetscClassId;
137d382aafbSBarry Smith 
138d382aafbSBarry Smith 
139d382aafbSBarry Smith /*MC
140d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
141d382aafbSBarry Smith 
142d382aafbSBarry Smith     Level: intermediate
143d382aafbSBarry Smith 
144d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1453b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
146d382aafbSBarry Smith 
1474dc2109aSBarry Smith     PetscMPIIntCast(a,&b) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
1482981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
149d382aafbSBarry Smith 
150d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
151d382aafbSBarry Smith 
152d382aafbSBarry Smith M*/
153d382aafbSBarry Smith typedef int PetscMPIInt;
154d382aafbSBarry Smith 
155d382aafbSBarry Smith /*MC
156d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
157d382aafbSBarry Smith 
158d382aafbSBarry Smith     Level: intermediate
159d382aafbSBarry Smith 
160d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
161d382aafbSBarry Smith M*/
162d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
1635a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum);
164d382aafbSBarry Smith 
165d382aafbSBarry Smith /*MC
166d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1673b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
168d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
169d382aafbSBarry Smith 
170d382aafbSBarry Smith    Level: intermediate
171d382aafbSBarry Smith 
172d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
173d382aafbSBarry Smith M*/
174f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
175f505b413SSatish Balay typedef long long Petsc64bitInt;
176f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
177236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
178236ed0a3SSatish Balay #else
179f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
180236ed0a3SSatish Balay #endif
181d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
182236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
183d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
184d382aafbSBarry Smith #else
185d382aafbSBarry Smith typedef int PetscInt;
186d382aafbSBarry Smith #define MPIU_INT MPI_INT
187d382aafbSBarry Smith #endif
188236ed0a3SSatish Balay 
189d382aafbSBarry Smith 
190702bc34aSSatish Balay /*MC
191702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
192702bc34aSSatish Balay 
193702bc34aSSatish Balay     Level: intermediate
194702bc34aSSatish Balay 
195702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
196702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
197702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
198702bc34aSSatish Balay 
199c5df96a5SBarry Smith     PetscErrorCode PetscBLASIntCast(a,&b) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
2002981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
201702bc34aSSatish Balay 
2022981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
203702bc34aSSatish Balay      if you run ./configure with the option
204702bc34aSSatish Balay      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
2052981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
2062981ebdbSBarry Smith 
2072981ebdbSBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices
2082981ebdbSBarry Smith 
2092981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
210702bc34aSSatish Balay 
211702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
212702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
213702bc34aSSatish Balay 
214702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt
215702bc34aSSatish Balay 
216702bc34aSSatish Balay M*/
217702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
218702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt;
219702bc34aSSatish Balay #else
220702bc34aSSatish Balay typedef int PetscBLASInt;
221702bc34aSSatish Balay #endif
222702bc34aSSatish Balay 
22358b60935SBarry Smith /*EC
22458b60935SBarry Smith 
2252981ebdbSBarry Smith     PetscPrecision - indicates what precision the object is using. This is currently not used.
22658b60935SBarry Smith 
22758b60935SBarry Smith     Level: advanced
22858b60935SBarry Smith 
22958b60935SBarry Smith .seealso: PetscObjectSetPrecision()
23058b60935SBarry Smith E*/
23158b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
232014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[];
23358b60935SBarry Smith 
234503cfb0cSBarry Smith /*
235503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
236503cfb0cSBarry Smith */
237d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
238adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED
239d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
240adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG
241d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
242adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG
243d382aafbSBarry Smith #else
244d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
245d382aafbSBarry Smith #endif
246d382aafbSBarry Smith 
247d382aafbSBarry Smith 
248d382aafbSBarry Smith /*
249d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
250d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
251d382aafbSBarry Smith */
252014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT;
253d382aafbSBarry Smith 
254d382aafbSBarry Smith /*
255d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
256d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
257d382aafbSBarry Smith */
258014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR;
259d382aafbSBarry Smith 
260d382aafbSBarry Smith /*MC
261d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
262d382aafbSBarry Smith 
263d382aafbSBarry Smith     Synopsis:
264f2ba6396SBarry Smith     #include "petscsys.h"
265ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
266d382aafbSBarry Smith 
267eca87e8dSBarry Smith     Not Collective
268eca87e8dSBarry Smith 
269d382aafbSBarry Smith     Input Parameters:
270d382aafbSBarry Smith .   cond - condition or expression
271d382aafbSBarry Smith 
272d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
273d382aafbSBarry Smith     branch is unlikely.
274d382aafbSBarry Smith 
275d382aafbSBarry Smith     Level: advanced
276d382aafbSBarry Smith 
277d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
278d382aafbSBarry Smith M*/
279d382aafbSBarry Smith 
280d382aafbSBarry Smith /*MC
281d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
282d382aafbSBarry Smith 
283d382aafbSBarry Smith     Synopsis:
284f2ba6396SBarry Smith     #include "petscsys.h"
285ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
286d382aafbSBarry Smith 
287eca87e8dSBarry Smith     Not Collective
288eca87e8dSBarry Smith 
289d382aafbSBarry Smith     Input Parameters:
290d382aafbSBarry Smith .   cond - condition or expression
291d382aafbSBarry Smith 
292d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
293d382aafbSBarry Smith     branch is likely.
294d382aafbSBarry Smith 
295d382aafbSBarry Smith     Level: advanced
296d382aafbSBarry Smith 
297d382aafbSBarry Smith .seealso: PetscUnlikely()
298d382aafbSBarry Smith M*/
299d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
300d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
301d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
302d382aafbSBarry Smith #else
303cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
304cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
305d382aafbSBarry Smith #endif
306d382aafbSBarry Smith 
307d382aafbSBarry Smith /*
308d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
309d382aafbSBarry Smith */
3102c8e378dSBarry Smith #include <petscmath.h>
311d382aafbSBarry Smith 
312d382aafbSBarry Smith /*
313d382aafbSBarry Smith     Declare extern C stuff after including external header files
314d382aafbSBarry Smith */
315d382aafbSBarry Smith 
316d382aafbSBarry Smith 
317d382aafbSBarry Smith /*
318d382aafbSBarry Smith        Basic PETSc constants
319d382aafbSBarry Smith */
320d382aafbSBarry Smith 
321d382aafbSBarry Smith /*E
322ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
323d382aafbSBarry Smith 
324d382aafbSBarry Smith    Level: beginner
325d382aafbSBarry Smith 
326ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
32734e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
32834e82e7dSBarry Smith 
329d382aafbSBarry Smith E*/
330ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
3316a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[];
3325a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool);
33370b3c8c7SBarry Smith 
33470b3c8c7SBarry Smith /*E
33570b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
33670b3c8c7SBarry Smith 
33770b3c8c7SBarry Smith    Level: beginner
33870b3c8c7SBarry Smith 
33970b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
34070b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
34170b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
34270b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
34370b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
34470b3c8c7SBarry Smith 
34570b3c8c7SBarry Smith E*/
34670b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
3476a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[];
348d382aafbSBarry Smith 
349d382aafbSBarry Smith /*MC
350ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
351d382aafbSBarry Smith 
352d382aafbSBarry Smith     Level: beginner
353d382aafbSBarry Smith 
354d382aafbSBarry Smith     Note: Zero integer
355d382aafbSBarry Smith 
356ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
357d382aafbSBarry Smith M*/
358d382aafbSBarry Smith 
359d382aafbSBarry Smith /*MC
360ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
361d382aafbSBarry Smith 
362d382aafbSBarry Smith     Level: beginner
363d382aafbSBarry Smith 
364d382aafbSBarry Smith     Note: Nonzero integer
365d382aafbSBarry Smith 
366ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
367d382aafbSBarry Smith M*/
368d382aafbSBarry Smith 
369d382aafbSBarry Smith /*MC
3700298fd71SBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer. This is deprecated in C/C++ simply use NULL
371d382aafbSBarry Smith 
372d382aafbSBarry Smith    Level: beginner
373d382aafbSBarry Smith 
374d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
375d382aafbSBarry Smith           some default
376d382aafbSBarry Smith 
377d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
378503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
379d382aafbSBarry Smith 
380d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
381d382aafbSBarry Smith 
382d382aafbSBarry Smith M*/
3833bcbec90SJed Brown #define PETSC_NULL           NULL
384d382aafbSBarry Smith 
385d382aafbSBarry Smith /*MC
3860298fd71SBarry Smith     PETSC_IGNORE - same as NULL, means PETSc will ignore this argument
387d382aafbSBarry Smith 
388d382aafbSBarry Smith    Level: beginner
389d382aafbSBarry Smith 
390d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
391d382aafbSBarry Smith           some default
392d382aafbSBarry Smith 
393d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
394d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
395d382aafbSBarry Smith 
396d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
397d382aafbSBarry Smith 
398d382aafbSBarry Smith M*/
3990298fd71SBarry Smith #define PETSC_IGNORE         NULL
400d382aafbSBarry Smith 
401d382aafbSBarry Smith /*MC
402557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
403557d4da8SBarry Smith        where you wish PETSc to use the default.
404557d4da8SBarry Smith 
405557d4da8SBarry Smith    Level: beginner
406557d4da8SBarry Smith 
407557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
408557d4da8SBarry Smith 
409557d4da8SBarry Smith M*/
410557d4da8SBarry Smith #define PETSC_DECIDE  -1
411557d4da8SBarry Smith 
412557d4da8SBarry Smith /*MC
413d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
414d382aafbSBarry Smith        where you wish PETSc to compute the required value.
415d382aafbSBarry Smith 
416d382aafbSBarry Smith    Level: beginner
417d382aafbSBarry Smith 
418557d4da8SBarry Smith 
419557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
420557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
421557d4da8SBarry Smith 
4220298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes()
423d382aafbSBarry Smith 
424d382aafbSBarry Smith M*/
425d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
426d382aafbSBarry Smith 
427d382aafbSBarry Smith /*MC
428557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
429557d4da8SBarry Smith        where you wish PETSc to use the default.
430557d4da8SBarry Smith 
431557d4da8SBarry Smith    Level: beginner
432557d4da8SBarry Smith 
433557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
434557d4da8SBarry Smith 
4350298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE
436557d4da8SBarry Smith 
437557d4da8SBarry Smith M*/
438557d4da8SBarry Smith #define PETSC_DEFAULT  -2
439557d4da8SBarry Smith 
440557d4da8SBarry Smith /*MC
441d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
442d382aafbSBarry Smith            all the processs that PETSc knows about.
443d382aafbSBarry Smith 
444d382aafbSBarry Smith    Level: beginner
445d382aafbSBarry Smith 
446d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
447d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
448d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
449d382aafbSBarry Smith           PetscInitialize()
450d382aafbSBarry Smith 
451d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
452d382aafbSBarry Smith 
453d382aafbSBarry Smith M*/
454014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
455d382aafbSBarry Smith 
456d382aafbSBarry Smith /*MC
457503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
458d382aafbSBarry Smith 
459d382aafbSBarry Smith    Level: beginner
460d382aafbSBarry Smith 
461d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
462d382aafbSBarry Smith 
463d382aafbSBarry Smith M*/
464d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
465d382aafbSBarry Smith 
466d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI;
467014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled;
468014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled;
469014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize;
470d382aafbSBarry Smith 
471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
474d382aafbSBarry Smith 
475d382aafbSBarry Smith /*MC
476d382aafbSBarry Smith    PetscMalloc - Allocates memory
477d382aafbSBarry Smith 
478eca87e8dSBarry Smith    Synopsis:
479f2ba6396SBarry Smith     #include "petscsys.h"
480eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
481eca87e8dSBarry Smith 
482eca87e8dSBarry Smith    Not Collective
483eca87e8dSBarry Smith 
484d382aafbSBarry Smith    Input Parameter:
485d382aafbSBarry Smith .  m - number of bytes to allocate
486d382aafbSBarry Smith 
487d382aafbSBarry Smith    Output Parameter:
488d382aafbSBarry Smith .  result - memory allocated
489d382aafbSBarry Smith 
490d382aafbSBarry Smith    Level: beginner
491d382aafbSBarry Smith 
492d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
493d382aafbSBarry Smith 
494d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
495d382aafbSBarry Smith           properly handle not freeing the null pointer.
496d382aafbSBarry Smith 
497d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
498d382aafbSBarry Smith 
499d382aafbSBarry Smith   Concepts: memory allocation
500d382aafbSBarry Smith 
501d382aafbSBarry Smith M*/
5022714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
503d382aafbSBarry Smith 
504d382aafbSBarry Smith /*MC
505503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
506d382aafbSBarry Smith 
507d382aafbSBarry Smith    Synopsis:
508f2ba6396SBarry Smith     #include "petscsys.h"
509d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
510d382aafbSBarry Smith 
511eca87e8dSBarry Smith    Not Collective
512eca87e8dSBarry Smith 
513eca87e8dSBarry Smith    Input Parameters:
514eca87e8dSBarry Smith .  addr - address to align (any pointer type)
515eca87e8dSBarry Smith 
516d382aafbSBarry Smith    Level: developer
517d382aafbSBarry Smith 
518d382aafbSBarry Smith .seealso: PetscMallocAlign()
519d382aafbSBarry Smith 
520d382aafbSBarry Smith   Concepts: memory allocation
521d382aafbSBarry Smith M*/
522d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
523d382aafbSBarry Smith 
524d382aafbSBarry Smith /*MC
525503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
526d382aafbSBarry Smith 
527eca87e8dSBarry Smith    Synopsis:
528f2ba6396SBarry Smith     #include "petscsys.h"
529eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
530eca87e8dSBarry Smith 
531eca87e8dSBarry Smith    Not Collective
532eca87e8dSBarry Smith 
533d382aafbSBarry Smith    Input Parameter:
534d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
535d382aafbSBarry Smith .  t1 - type of first memory elements
536d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
537d382aafbSBarry Smith -  t2 - type of second memory elements
538d382aafbSBarry Smith 
539d382aafbSBarry Smith    Output Parameter:
540d382aafbSBarry Smith +  r1 - memory allocated in first chunk
541d382aafbSBarry Smith -  r2 - memory allocated in second chunk
542d382aafbSBarry Smith 
543d382aafbSBarry Smith    Level: developer
544d382aafbSBarry Smith 
545d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
546d382aafbSBarry Smith 
547d382aafbSBarry Smith   Concepts: memory allocation
548d382aafbSBarry Smith 
549d382aafbSBarry Smith M*/
550d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
551d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
552d382aafbSBarry Smith #else
5532981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
554d382aafbSBarry Smith #endif
555d382aafbSBarry Smith 
556d382aafbSBarry Smith /*MC
557503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
558d382aafbSBarry Smith 
559eca87e8dSBarry Smith    Synopsis:
560f2ba6396SBarry Smith     #include "petscsys.h"
561eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
562eca87e8dSBarry Smith 
563eca87e8dSBarry Smith    Not Collective
564eca87e8dSBarry Smith 
565d382aafbSBarry Smith    Input Parameter:
566d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
567d382aafbSBarry Smith .  t1 - type of first memory elements
568d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
569d382aafbSBarry Smith .  t2 - type of second memory elements
570d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
571d382aafbSBarry Smith -  t3 - type of third memory elements
572d382aafbSBarry Smith 
573d382aafbSBarry Smith    Output Parameter:
574d382aafbSBarry Smith +  r1 - memory allocated in first chunk
575d382aafbSBarry Smith .  r2 - memory allocated in second chunk
576d382aafbSBarry Smith -  r3 - memory allocated in third chunk
577d382aafbSBarry Smith 
578d382aafbSBarry Smith    Level: developer
579d382aafbSBarry Smith 
580d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
581d382aafbSBarry Smith 
582d382aafbSBarry Smith   Concepts: memory allocation
583d382aafbSBarry Smith 
584d382aafbSBarry Smith M*/
585d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
586d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
587d382aafbSBarry Smith #else
5883b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
589d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
590d382aafbSBarry Smith #endif
591d382aafbSBarry Smith 
592d382aafbSBarry Smith /*MC
593503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
594d382aafbSBarry Smith 
595eca87e8dSBarry Smith    Synopsis:
596f2ba6396SBarry Smith     #include "petscsys.h"
597eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
598eca87e8dSBarry Smith 
599eca87e8dSBarry Smith    Not Collective
600eca87e8dSBarry Smith 
601d382aafbSBarry Smith    Input Parameter:
602d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
603d382aafbSBarry Smith .  t1 - type of first memory elements
604d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
605d382aafbSBarry Smith .  t2 - type of second memory elements
606d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
607d382aafbSBarry Smith .  t3 - type of third memory elements
608d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
609d382aafbSBarry Smith -  t4 - type of fourth memory elements
610d382aafbSBarry Smith 
611d382aafbSBarry Smith    Output Parameter:
612d382aafbSBarry Smith +  r1 - memory allocated in first chunk
613d382aafbSBarry Smith .  r2 - memory allocated in second chunk
614d382aafbSBarry Smith .  r3 - memory allocated in third chunk
615d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
616d382aafbSBarry Smith 
617d382aafbSBarry Smith    Level: developer
618d382aafbSBarry Smith 
619d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
620d382aafbSBarry Smith 
621d382aafbSBarry Smith   Concepts: memory allocation
622d382aafbSBarry Smith 
623d382aafbSBarry Smith M*/
624d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
625d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
626d382aafbSBarry Smith #else
627d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6283b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
629d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
630d382aafbSBarry Smith #endif
631d382aafbSBarry Smith 
632d382aafbSBarry Smith /*MC
633503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
634d382aafbSBarry Smith 
635eca87e8dSBarry Smith    Synopsis:
636f2ba6396SBarry Smith     #include "petscsys.h"
637eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
638eca87e8dSBarry Smith 
639eca87e8dSBarry Smith    Not Collective
640eca87e8dSBarry Smith 
641d382aafbSBarry Smith    Input Parameter:
642d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
643d382aafbSBarry Smith .  t1 - type of first memory elements
644d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
645d382aafbSBarry Smith .  t2 - type of second memory elements
646d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
647d382aafbSBarry Smith .  t3 - type of third memory elements
648d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
649d382aafbSBarry Smith .  t4 - type of fourth memory elements
650d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
651d382aafbSBarry Smith -  t5 - type of fifth memory elements
652d382aafbSBarry Smith 
653d382aafbSBarry Smith    Output Parameter:
654d382aafbSBarry Smith +  r1 - memory allocated in first chunk
655d382aafbSBarry Smith .  r2 - memory allocated in second chunk
656d382aafbSBarry Smith .  r3 - memory allocated in third chunk
657d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
658d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
659d382aafbSBarry Smith 
660d382aafbSBarry Smith    Level: developer
661d382aafbSBarry Smith 
662d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
663d382aafbSBarry Smith 
664d382aafbSBarry Smith   Concepts: memory allocation
665d382aafbSBarry Smith 
666d382aafbSBarry Smith M*/
667d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
668d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
669d382aafbSBarry Smith #else
670d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
6713b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
672d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
673d382aafbSBarry Smith #endif
674d382aafbSBarry Smith 
675d382aafbSBarry Smith 
676d382aafbSBarry Smith /*MC
677503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
678d382aafbSBarry Smith 
679eca87e8dSBarry Smith    Synopsis:
680f2ba6396SBarry Smith     #include "petscsys.h"
681eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
682eca87e8dSBarry Smith 
683eca87e8dSBarry Smith    Not Collective
684eca87e8dSBarry Smith 
685d382aafbSBarry Smith    Input Parameter:
686d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
687d382aafbSBarry Smith .  t1 - type of first memory elements
688d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
689d382aafbSBarry Smith .  t2 - type of second memory elements
690d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
691d382aafbSBarry Smith .  t3 - type of third memory elements
692d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
693d382aafbSBarry Smith .  t4 - type of fourth memory elements
694d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
695d382aafbSBarry Smith .  t5 - type of fifth memory elements
696d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
697d382aafbSBarry Smith -  t6 - type of sixth memory elements
698d382aafbSBarry Smith 
699d382aafbSBarry Smith    Output Parameter:
700d382aafbSBarry Smith +  r1 - memory allocated in first chunk
701d382aafbSBarry Smith .  r2 - memory allocated in second chunk
702d382aafbSBarry Smith .  r3 - memory allocated in third chunk
703d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
704d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
705d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
706d382aafbSBarry Smith 
707d382aafbSBarry Smith    Level: developer
708d382aafbSBarry Smith 
709d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
710d382aafbSBarry Smith 
711d382aafbSBarry Smith   Concepts: memory allocation
712d382aafbSBarry Smith 
713d382aafbSBarry Smith M*/
714d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
715d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
716d382aafbSBarry Smith #else
717d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7183b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
719d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
720d382aafbSBarry Smith #endif
721d382aafbSBarry Smith 
722d382aafbSBarry Smith /*MC
723503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
724d382aafbSBarry Smith 
725eca87e8dSBarry Smith    Synopsis:
726f2ba6396SBarry Smith     #include "petscsys.h"
727eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
728eca87e8dSBarry Smith 
729eca87e8dSBarry Smith    Not Collective
730eca87e8dSBarry Smith 
731d382aafbSBarry Smith    Input Parameter:
732d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
733d382aafbSBarry Smith .  t1 - type of first memory elements
734d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
735d382aafbSBarry Smith .  t2 - type of second memory elements
736d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
737d382aafbSBarry Smith .  t3 - type of third memory elements
738d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
739d382aafbSBarry Smith .  t4 - type of fourth memory elements
740d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
741d382aafbSBarry Smith .  t5 - type of fifth memory elements
742d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
743d382aafbSBarry Smith .  t6 - type of sixth memory elements
744d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
745d382aafbSBarry Smith -  t7 - type of sixth memory elements
746d382aafbSBarry Smith 
747d382aafbSBarry Smith    Output Parameter:
748d382aafbSBarry Smith +  r1 - memory allocated in first chunk
749d382aafbSBarry Smith .  r2 - memory allocated in second chunk
750d382aafbSBarry Smith .  r3 - memory allocated in third chunk
751d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
752d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
753d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
754eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
755d382aafbSBarry Smith 
756d382aafbSBarry Smith    Level: developer
757d382aafbSBarry Smith 
758d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
759d382aafbSBarry Smith 
760d382aafbSBarry Smith   Concepts: memory allocation
761d382aafbSBarry Smith 
762d382aafbSBarry Smith M*/
763d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
764d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
765d382aafbSBarry Smith #else
766d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
7673b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
768d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
769d382aafbSBarry Smith #endif
770d382aafbSBarry Smith 
771d382aafbSBarry Smith /*MC
772503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
773d382aafbSBarry Smith 
774eca87e8dSBarry Smith    Synopsis:
775f2ba6396SBarry Smith     #include "petscsys.h"
776eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
777eca87e8dSBarry Smith 
778eca87e8dSBarry Smith    Not Collective
779eca87e8dSBarry Smith 
780d382aafbSBarry Smith    Input Parameter:
781d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
782d382aafbSBarry Smith 
783d382aafbSBarry Smith    Output Parameter:
784d382aafbSBarry Smith .  result - memory allocated
785d382aafbSBarry Smith 
786d382aafbSBarry Smith    Level: beginner
787d382aafbSBarry Smith 
788ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
789d382aafbSBarry Smith 
790d382aafbSBarry Smith   Concepts: memory allocation
791d382aafbSBarry Smith 
792d382aafbSBarry Smith M*/
793d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
794ad0619ddSBarry Smith 
795ad0619ddSBarry Smith /*MC
796ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
797ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
798ad0619ddSBarry Smith 
799ad0619ddSBarry Smith    Synopsis:
800f2ba6396SBarry Smith     #include "petscsys.h"
801ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
802ad0619ddSBarry Smith 
803ad0619ddSBarry Smith    Not Collective
804ad0619ddSBarry Smith 
805ad0619ddSBarry Smith    Input Parameter:
806ad0619ddSBarry Smith +  obj - object memory is logged to
807ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
808ad0619ddSBarry Smith 
809ad0619ddSBarry Smith    Output Parameter:
810ad0619ddSBarry Smith .  result - memory allocated
811ad0619ddSBarry Smith 
812ad0619ddSBarry Smith    Level: developer
813ad0619ddSBarry Smith 
814ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
815ad0619ddSBarry Smith 
816ad0619ddSBarry Smith   Concepts: memory allocation
817ad0619ddSBarry Smith 
818ad0619ddSBarry Smith M*/
819d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
820d382aafbSBarry Smith 
821d382aafbSBarry Smith /*MC
822d382aafbSBarry Smith    PetscFree - Frees memory
823d382aafbSBarry Smith 
824eca87e8dSBarry Smith    Synopsis:
825f2ba6396SBarry Smith     #include "petscsys.h"
826eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
827eca87e8dSBarry Smith 
828eca87e8dSBarry Smith    Not Collective
829eca87e8dSBarry Smith 
830d382aafbSBarry Smith    Input Parameter:
831d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
832d382aafbSBarry Smith 
833d382aafbSBarry Smith    Level: beginner
834d382aafbSBarry Smith 
835d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
836d382aafbSBarry Smith 
837d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
838d382aafbSBarry Smith 
839d382aafbSBarry Smith   Concepts: memory allocation
840d382aafbSBarry Smith 
841d382aafbSBarry Smith M*/
84212537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
843d382aafbSBarry Smith 
844d382aafbSBarry Smith /*MC
845d382aafbSBarry Smith    PetscFreeVoid - Frees memory
846d382aafbSBarry Smith 
847d382aafbSBarry Smith    Synopsis:
848f2ba6396SBarry Smith     #include "petscsys.h"
849d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
850d382aafbSBarry Smith 
851eca87e8dSBarry Smith    Not Collective
852eca87e8dSBarry Smith 
853eca87e8dSBarry Smith    Input Parameter:
854eca87e8dSBarry Smith .   memory - memory to free
855eca87e8dSBarry Smith 
856d382aafbSBarry Smith    Level: beginner
857d382aafbSBarry Smith 
858d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
859d382aafbSBarry Smith 
860d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
861d382aafbSBarry Smith 
862d382aafbSBarry Smith   Concepts: memory allocation
863d382aafbSBarry Smith 
864d382aafbSBarry Smith M*/
8652714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
866d382aafbSBarry Smith 
867d382aafbSBarry Smith 
868d382aafbSBarry Smith /*MC
869d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
870d382aafbSBarry Smith 
871eca87e8dSBarry Smith    Synopsis:
872f2ba6396SBarry Smith     #include "petscsys.h"
873eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
874eca87e8dSBarry Smith 
875eca87e8dSBarry Smith    Not Collective
876eca87e8dSBarry Smith 
877d382aafbSBarry Smith    Input Parameter:
878d382aafbSBarry Smith +   memory1 - memory to free
879d382aafbSBarry Smith -   memory2 - 2nd memory to free
880d382aafbSBarry Smith 
881d382aafbSBarry Smith    Level: developer
882d382aafbSBarry Smith 
883d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
884d382aafbSBarry Smith 
885d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
886d382aafbSBarry Smith 
887d382aafbSBarry Smith   Concepts: memory allocation
888d382aafbSBarry Smith 
889d382aafbSBarry Smith M*/
890d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
891d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
892d382aafbSBarry Smith #else
89381dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
894d382aafbSBarry Smith #endif
895d382aafbSBarry Smith 
896d382aafbSBarry Smith /*MC
897d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
898d382aafbSBarry Smith 
899eca87e8dSBarry Smith    Synopsis:
900f2ba6396SBarry Smith     #include "petscsys.h"
901eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
902eca87e8dSBarry Smith 
903eca87e8dSBarry Smith    Not Collective
904eca87e8dSBarry Smith 
905d382aafbSBarry Smith    Input Parameter:
906d382aafbSBarry Smith +   memory1 - memory to free
907d382aafbSBarry Smith .   memory2 - 2nd memory to free
908d382aafbSBarry Smith -   memory3 - 3rd memory to free
909d382aafbSBarry Smith 
910d382aafbSBarry Smith    Level: developer
911d382aafbSBarry Smith 
912d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
913d382aafbSBarry Smith 
914d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
915d382aafbSBarry Smith 
916d382aafbSBarry Smith   Concepts: memory allocation
917d382aafbSBarry Smith 
918d382aafbSBarry Smith M*/
919d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
920d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
921d382aafbSBarry Smith #else
92281dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
923d382aafbSBarry Smith #endif
924d382aafbSBarry Smith 
925d382aafbSBarry Smith /*MC
926d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
927d382aafbSBarry Smith 
928eca87e8dSBarry Smith    Synopsis:
929f2ba6396SBarry Smith     #include "petscsys.h"
930eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
931eca87e8dSBarry Smith 
932eca87e8dSBarry Smith    Not Collective
933eca87e8dSBarry Smith 
934d382aafbSBarry Smith    Input Parameter:
935d382aafbSBarry Smith +   m1 - memory to free
936d382aafbSBarry Smith .   m2 - 2nd memory to free
937d382aafbSBarry Smith .   m3 - 3rd memory to free
938d382aafbSBarry Smith -   m4 - 4th memory to free
939d382aafbSBarry Smith 
940d382aafbSBarry Smith    Level: developer
941d382aafbSBarry Smith 
942d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
943d382aafbSBarry Smith 
944d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
945d382aafbSBarry Smith 
946d382aafbSBarry Smith   Concepts: memory allocation
947d382aafbSBarry Smith 
948d382aafbSBarry Smith M*/
949d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
950d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
951d382aafbSBarry Smith #else
95281dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
953d382aafbSBarry Smith #endif
954d382aafbSBarry Smith 
955d382aafbSBarry Smith /*MC
956d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
957d382aafbSBarry Smith 
958eca87e8dSBarry Smith    Synopsis:
959f2ba6396SBarry Smith     #include "petscsys.h"
960eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
961eca87e8dSBarry Smith 
962eca87e8dSBarry Smith    Not Collective
963eca87e8dSBarry Smith 
964d382aafbSBarry Smith    Input Parameter:
965d382aafbSBarry Smith +   m1 - memory to free
966d382aafbSBarry Smith .   m2 - 2nd memory to free
967d382aafbSBarry Smith .   m3 - 3rd memory to free
968d382aafbSBarry Smith .   m4 - 4th memory to free
969d382aafbSBarry Smith -   m5 - 5th memory to free
970d382aafbSBarry Smith 
971d382aafbSBarry Smith    Level: developer
972d382aafbSBarry Smith 
973d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
974d382aafbSBarry Smith 
975d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
976d382aafbSBarry Smith 
977d382aafbSBarry Smith   Concepts: memory allocation
978d382aafbSBarry Smith 
979d382aafbSBarry Smith M*/
980d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
981d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
982d382aafbSBarry Smith #else
98381dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
984d382aafbSBarry Smith #endif
985d382aafbSBarry Smith 
986d382aafbSBarry Smith 
987d382aafbSBarry Smith /*MC
988d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
989d382aafbSBarry Smith 
990eca87e8dSBarry Smith    Synopsis:
991f2ba6396SBarry Smith     #include "petscsys.h"
992eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
993eca87e8dSBarry Smith 
994eca87e8dSBarry Smith    Not Collective
995eca87e8dSBarry Smith 
996d382aafbSBarry Smith    Input Parameter:
997d382aafbSBarry Smith +   m1 - memory to free
998d382aafbSBarry Smith .   m2 - 2nd memory to free
999d382aafbSBarry Smith .   m3 - 3rd memory to free
1000d382aafbSBarry Smith .   m4 - 4th memory to free
1001d382aafbSBarry Smith .   m5 - 5th memory to free
1002d382aafbSBarry Smith -   m6 - 6th memory to free
1003d382aafbSBarry Smith 
1004d382aafbSBarry Smith 
1005d382aafbSBarry Smith    Level: developer
1006d382aafbSBarry Smith 
1007d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1008d382aafbSBarry Smith 
1009d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1010d382aafbSBarry Smith 
1011d382aafbSBarry Smith   Concepts: memory allocation
1012d382aafbSBarry Smith 
1013d382aafbSBarry Smith M*/
1014d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1015d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1016d382aafbSBarry Smith #else
101781dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1018d382aafbSBarry Smith #endif
1019d382aafbSBarry Smith 
1020d382aafbSBarry Smith /*MC
1021d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1022d382aafbSBarry Smith 
1023eca87e8dSBarry Smith    Synopsis:
1024f2ba6396SBarry Smith     #include "petscsys.h"
1025eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1026eca87e8dSBarry Smith 
1027eca87e8dSBarry Smith    Not Collective
1028eca87e8dSBarry Smith 
1029d382aafbSBarry Smith    Input Parameter:
1030d382aafbSBarry Smith +   m1 - memory to free
1031d382aafbSBarry Smith .   m2 - 2nd memory to free
1032d382aafbSBarry Smith .   m3 - 3rd memory to free
1033d382aafbSBarry Smith .   m4 - 4th memory to free
1034d382aafbSBarry Smith .   m5 - 5th memory to free
1035d382aafbSBarry Smith .   m6 - 6th memory to free
1036d382aafbSBarry Smith -   m7 - 7th memory to free
1037d382aafbSBarry Smith 
1038d382aafbSBarry Smith 
1039d382aafbSBarry Smith    Level: developer
1040d382aafbSBarry Smith 
1041d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1042d382aafbSBarry Smith 
1043d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1044d382aafbSBarry Smith           PetscMalloc7()
1045d382aafbSBarry Smith 
1046d382aafbSBarry Smith   Concepts: memory allocation
1047d382aafbSBarry Smith 
1048d382aafbSBarry Smith M*/
1049d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1050d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1051d382aafbSBarry Smith #else
105281dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1053d382aafbSBarry Smith #endif
1054d382aafbSBarry Smith 
1055014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
1056014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
1057014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
1058014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1059d382aafbSBarry Smith 
1060d382aafbSBarry Smith /*
1061a5057860SBarry Smith     PetscLogDouble variables are used to contain double precision numbers
1062a5057860SBarry Smith   that are not used in the numerical computations, but rather in logging,
1063a5057860SBarry Smith   timing etc.
1064a5057860SBarry Smith */
1065a5057860SBarry Smith typedef double PetscLogDouble;
1066a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1067a5057860SBarry Smith 
1068a5057860SBarry Smith /*
106966d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1070d382aafbSBarry Smith */
1071014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
1072014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *);
1073014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1074014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1075014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool);
1076*0acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*);
1077014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]);
1078014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void);
1079574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble);
1080014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1081d382aafbSBarry Smith 
1082d382aafbSBarry Smith /*E
1083d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1084d382aafbSBarry Smith 
1085d382aafbSBarry Smith    Level: beginner
1086d382aafbSBarry Smith 
1087d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1088d382aafbSBarry Smith 
1089d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1090d382aafbSBarry Smith           PetscDataTypeGetSize()
1091d382aafbSBarry Smith 
1092d382aafbSBarry Smith E*/
1093d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
10942d53ad75SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;
10956a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[];
1096d382aafbSBarry Smith 
1097d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1098d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1099d382aafbSBarry Smith #else
1100ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1101d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
110259a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
110359a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1104d382aafbSBarry Smith #else
1105d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1106d382aafbSBarry Smith #endif
1107d382aafbSBarry Smith #endif
1108ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1109d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
111059a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
111159a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1112d382aafbSBarry Smith #else
1113d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1114d382aafbSBarry Smith #endif
1115d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1116d382aafbSBarry Smith 
1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1118014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1119014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
1120d382aafbSBarry Smith 
1121d382aafbSBarry Smith /*
1122d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1123d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1124d382aafbSBarry Smith    functionality and/or error checking.
1125d382aafbSBarry Smith */
1126014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
1127014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t);
1128014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
1129014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1130d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***);
1131014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1132014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool  *);
1133014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool  *);
1134014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1135014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t);
1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
11422f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]);
1143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
11472c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*);
1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
115047340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***);
11516fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***);
1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1153d382aafbSBarry Smith 
1154573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool  *);
1155573b0fb4SBarry Smith 
1156d382aafbSBarry Smith /*S
1157d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1158d382aafbSBarry Smith 
1159d382aafbSBarry Smith   Level: intermediate
1160d382aafbSBarry Smith 
1161d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1162d382aafbSBarry Smith S*/
1163d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1164d382aafbSBarry Smith 
1165014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1166014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1167014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1168d382aafbSBarry Smith 
1169d382aafbSBarry Smith /*
1170d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1171d382aafbSBarry Smith */
1172014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op;
11737c2de775SJed Brown #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
1174014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM;
11752414b3c7SJed Brown #else
11762414b3c7SJed Brown #define MPIU_SUM MPI_SUM
11772414b3c7SJed Brown #endif
11782414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128)
1179014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX;
1180014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN;
1181d9822059SBarry Smith #else
1182d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1183d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1184d9822059SBarry Smith #endif
1185014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1186d382aafbSBarry Smith 
1187014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1188014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1189eb3f98d2SBarry Smith 
1190d382aafbSBarry Smith /*S
1191d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1192d382aafbSBarry Smith 
1193d382aafbSBarry Smith    Level: beginner
1194d382aafbSBarry Smith 
11952981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1196d382aafbSBarry Smith 
11971890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1198d382aafbSBarry Smith S*/
1199d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1200d382aafbSBarry Smith 
1201d382aafbSBarry Smith /*S
1202140e18c1SBarry Smith      PetscFunctionList - Linked list of functions, possibly stored in dynamic libraries, accessed
1203d382aafbSBarry Smith       by string name
1204d382aafbSBarry Smith 
1205d382aafbSBarry Smith    Level: advanced
1206d382aafbSBarry Smith 
1207140e18c1SBarry Smith .seealso:  PetscFunctionListAdd(), PetscFunctionListDestroy(), PetscOpFlist
1208d382aafbSBarry Smith S*/
1209140e18c1SBarry Smith typedef struct _n_PetscFunctionList *PetscFunctionList;
1210d382aafbSBarry Smith 
1211d382aafbSBarry Smith /*E
1212d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1213d382aafbSBarry Smith 
1214d382aafbSBarry Smith   Level: beginner
1215d382aafbSBarry Smith 
1216d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1217d382aafbSBarry Smith 
1218d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1219d382aafbSBarry Smith 
1220d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1221d382aafbSBarry Smith 
1222d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1223d382aafbSBarry Smith 
1224d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1225d382aafbSBarry Smith 
1226d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1227d382aafbSBarry Smith E*/
1228d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1229639ff905SBarry Smith /*
1230639ff905SBarry Smith     Defines PETSc error handling.
1231639ff905SBarry Smith */
1232639ff905SBarry Smith #include <petscerror.h>
1233d382aafbSBarry Smith 
12340700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
1235014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1236014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1238d382aafbSBarry Smith 
1239d382aafbSBarry Smith /*
1240d382aafbSBarry Smith    Routines that get memory usage information from the OS
1241d382aafbSBarry Smith */
1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1245d382aafbSBarry Smith 
1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []);
1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*);
1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*);
1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1250d382aafbSBarry Smith 
1251d382aafbSBarry Smith /*
1252d382aafbSBarry Smith    Initialization of PETSc
1253d382aafbSBarry Smith */
1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1264d382aafbSBarry Smith 
1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void);
1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]);
1267d382aafbSBarry Smith 
1268014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD;
1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt);
1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void);
1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*);
1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**);
1276d382aafbSBarry Smith 
1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1281d382aafbSBarry Smith 
1282d382aafbSBarry Smith /*
1283d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
12842981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1285d382aafbSBarry Smith */
1286638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);
1287638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);
1288638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1289d382aafbSBarry Smith 
1290d382aafbSBarry Smith /*
1291d382aafbSBarry Smith     Functions that can act on any PETSc object.
1292d382aafbSBarry Smith */
1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []);
1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision);
1299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *);
131200de8ff0SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],const char[],void (*)(void));
131300de8ff0SBarry Smith #define PetscObjectComposeFunction(a,b,c,d) PetscObjectComposeFunction_Private(a,b,c,(PetscVoidFunction)(d))
1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject);
1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject);
1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
1321d382aafbSBarry Smith 
1322665c2dedSJed Brown #include <petscviewertypes.h>
1323639ff905SBarry Smith #include <petscoptions.h>
1324639ff905SBarry Smith 
1325639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]);
1326639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
1327639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
1328639ff905SBarry Smith 
1329d382aafbSBarry Smith /*MC
1330d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1331d382aafbSBarry Smith 
1332eca87e8dSBarry Smith     Synopsis:
1333f2ba6396SBarry Smith     #include "petscsys.h"
1334eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1335eca87e8dSBarry Smith 
1336ad4df100SBarry Smith    Logically Collective on PetscObject
1337d382aafbSBarry Smith 
1338d382aafbSBarry Smith    Input Parameters:
1339d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1340d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1341d382aafbSBarry Smith .  name - name associated with the child function
1342d382aafbSBarry Smith .  fname - name of the function
13430298fd71SBarry Smith -  ptr - function pointer (or NULL if using dynamic libraries)
1344d382aafbSBarry Smith 
1345d382aafbSBarry Smith    Level: advanced
1346d382aafbSBarry Smith 
1347d382aafbSBarry Smith 
1348d382aafbSBarry Smith    Notes:
13490298fd71SBarry Smith    To remove a registered routine, pass in a NULL rname and fnc().
1350d382aafbSBarry Smith 
1351d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1352d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1353d382aafbSBarry Smith 
1354d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
135520de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1356d382aafbSBarry Smith    enabled.
1357d382aafbSBarry Smith 
1358d382aafbSBarry Smith    Concepts: objects^composing functions
1359d382aafbSBarry Smith    Concepts: composing functions
1360d382aafbSBarry Smith    Concepts: functions^querying
1361d382aafbSBarry Smith    Concepts: objects^querying
1362d382aafbSBarry Smith    Concepts: querying objects
1363d382aafbSBarry Smith 
1364d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1365d382aafbSBarry Smith M*/
1366d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1367d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1368d382aafbSBarry Smith #else
136900de8ff0SBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,d)
1370d382aafbSBarry Smith #endif
1371d382aafbSBarry Smith 
1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1385d382aafbSBarry Smith 
1386ec7429eaSBarry Smith #if defined(PETSC_HAVE_AMS)
1387f05ece33SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSViewOff(PetscObject);
1388b90c6cbeSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSSetBlock(PetscObject,PetscBool);
1389b90c6cbeSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSBlock(PetscObject);
1390ec7429eaSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSGrantAccess(PetscObject);
1391ec7429eaSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSTakeAccess(PetscObject);
1392ec7429eaSBarry Smith #else
1393f05ece33SBarry Smith #define PetscObjectAMSViewOff(obj)           0
1394ec7429eaSBarry Smith #define PetscObjectAMSSetBlock(obj,flg)        0
1395ec7429eaSBarry Smith #define PetscObjectAMSBlock(obj)               0
1396ec7429eaSBarry Smith #define PetscObjectAMSGrantAccess(obj)         0
1397ec7429eaSBarry Smith #define PetscObjectAMSTakeAccess(obj)          0
1398ec7429eaSBarry Smith #endif
1399b90c6cbeSBarry Smith 
14007d5d4d99SBarry Smith typedef void* PetscDLHandle;
1401e4d177b5SBarry Smith typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;
1402e4d177b5SBarry Smith extern PetscErrorCode  PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *);
14037d5d4d99SBarry Smith extern PetscErrorCode  PetscDLClose(PetscDLHandle *);
14047d5d4d99SBarry Smith extern PetscErrorCode  PetscDLSym(PetscDLHandle,const char[],void **);
14057d5d4d99SBarry Smith 
1406d382aafbSBarry Smith 
14075fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG)
1408a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**);
14095fe58b6fSBarry Smith #endif
14107eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool);
1411a64a8e02SBarry Smith 
1412d382aafbSBarry Smith /*S
1413140e18c1SBarry Smith      PetscObjectList - Linked list of PETSc objects, each accessable by string name
1414d382aafbSBarry Smith 
14151d0fab5eSBarry Smith    Level: developer
1416d382aafbSBarry Smith 
14171d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14181d0fab5eSBarry Smith 
1419140e18c1SBarry Smith .seealso:  PetscObjectListAdd(), PetscObjectListDestroy(), PetscObjectListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFunctionList
1420d382aafbSBarry Smith S*/
1421140e18c1SBarry Smith typedef struct _n_PetscObjectList *PetscObjectList;
1422d382aafbSBarry Smith 
1423140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*);
1424140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*);
1425140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*);
1426140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject);
1427140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]);
1428140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *);
1429d382aafbSBarry Smith 
1430d382aafbSBarry Smith /*
1431503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1432d382aafbSBarry Smith   link libraries that will be loaded as needed.
1433d382aafbSBarry Smith */
1434140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListAdd(MPI_Comm,PetscFunctionList*,const char[],const char[],void (*)(void));
1435140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*);
1436140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListFind(MPI_Comm,PetscFunctionList,const char[],PetscBool,void (**)(void));
1437140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]);
1438d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1439140e18c1SBarry Smith #define    PetscFunctionListAddDynamic(mc,a,b,p,c) PetscFunctionListAdd(mc,a,b,p,0)
1440d382aafbSBarry Smith #else
1441140e18c1SBarry Smith #define    PetscFunctionListAddDynamic(mc,a,b,p,c) PetscFunctionListAdd(mc,a,b,p,(void (*)(void))c)
1442d382aafbSBarry Smith #endif
1443140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *);
1444140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer);
1445140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListConcat(const char [],const char [],char []);
1446140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*);
1447d382aafbSBarry Smith 
1448d382aafbSBarry Smith /*S
1449d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1450d382aafbSBarry Smith 
1451d382aafbSBarry Smith    Level: advanced
1452d382aafbSBarry Smith 
145320de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1454d382aafbSBarry Smith 
1455d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1456d382aafbSBarry Smith S*/
1457d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1458014dd563SJed Brown PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;
1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1466d382aafbSBarry Smith 
1467d382aafbSBarry Smith /*
1468d382aafbSBarry Smith      Useful utility routines
1469d382aafbSBarry Smith */
1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
1476d382aafbSBarry Smith 
1477503cfb0cSBarry Smith /*
1478ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1479503cfb0cSBarry Smith 
1480503cfb0cSBarry Smith     Notes: This is useful in cases like
1481503cfb0cSBarry Smith $     int        *a;
1482ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1483ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1484503cfb0cSBarry Smith */
1485d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1486503cfb0cSBarry Smith 
1487cae2f346SBarry Smith #if defined(PETSC_HAVE_VALGRIND)
1488cae2f346SBarry Smith #  include <valgrind/valgrind.h>
1489cae2f346SBarry Smith #  define PETSC_RUNNING_ON_VALGRIND RUNNING_ON_VALGRIND
1490cae2f346SBarry Smith #else
1491cae2f346SBarry Smith #  define PETSC_RUNNING_ON_VALGRIND PETSC_FALSE
1492cae2f346SBarry Smith #endif
1493cae2f346SBarry Smith 
1494238ccf28SShri Abhyankar 
1495d382aafbSBarry Smith /*MC
1496d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1497d382aafbSBarry Smith 
1498d382aafbSBarry Smith    Synopsis:
1499f2ba6396SBarry Smith     #include "petscsys.h"
1500d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1501d382aafbSBarry Smith 
1502eca87e8dSBarry Smith     Not Collective
1503eca87e8dSBarry Smith 
1504d382aafbSBarry Smith     Input Parameters:
1505d382aafbSBarry Smith .   format - the usual printf() format string
1506d382aafbSBarry Smith 
1507d382aafbSBarry Smith    Level: developer
1508d382aafbSBarry Smith 
1509d382aafbSBarry Smith     Fortran Note:
1510d382aafbSBarry Smith     This routine is not supported in Fortran.
1511d382aafbSBarry Smith 
1512d382aafbSBarry Smith     Concepts: help messages^printing
1513d382aafbSBarry Smith     Concepts: printing^help messages
1514d382aafbSBarry Smith 
1515d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1516d382aafbSBarry Smith M*/
1517014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1518d382aafbSBarry Smith 
1519fcfd50ebSBarry Smith /*
1520fcfd50ebSBarry Smith      Defines PETSc profiling.
1521fcfd50ebSBarry Smith */
15222c8e378dSBarry Smith #include <petsclog.h>
1523fcfd50ebSBarry Smith 
1524b90c6cbeSBarry Smith 
1525fcfd50ebSBarry Smith 
1526fcfd50ebSBarry Smith /*
1527fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1528fcfd50ebSBarry Smith */
1529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
1532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...);
1534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...);
1535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1536fcfd50ebSBarry Smith 
1537fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1538fcfd50ebSBarry Smith #include <stdarg.h>
1539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1540014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list);
1541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list);
1542fcfd50ebSBarry Smith 
1543fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1545fcfd50ebSBarry Smith #endif
1546fcfd50ebSBarry Smith 
1547014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...);
1548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...);
1549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1550d382aafbSBarry Smith 
1551d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
1552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
1553784ad74dSJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,PetscInt*);
1554d382aafbSBarry Smith #endif
1555d382aafbSBarry Smith 
1556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...);
1557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
1558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm);
1559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1561014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1562014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1563d382aafbSBarry Smith 
1564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1565d382aafbSBarry Smith 
1566d382aafbSBarry Smith /*S
1567d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1568d382aafbSBarry Smith 
1569d382aafbSBarry Smith    Level: advanced
1570d382aafbSBarry Smith 
1571d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1572d382aafbSBarry Smith S*/
1573014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1574d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
1575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **);
1576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *);
1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *);
1579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1580d382aafbSBarry Smith 
1581d382aafbSBarry Smith /*
1582d382aafbSBarry Smith    For use in debuggers
1583d382aafbSBarry Smith */
1584014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1585014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1586014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1589d382aafbSBarry Smith 
1590a663daf8SBarry Smith #include <stddef.h>
1591d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1592d382aafbSBarry Smith #include <memory.h>
1593d382aafbSBarry Smith #endif
1594d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1595d382aafbSBarry Smith #include <stdlib.h>
1596d382aafbSBarry Smith #endif
15976c7e564aSBarry Smith 
15984a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1599d382aafbSBarry Smith #include <xmmintrin.h>
1600d382aafbSBarry Smith #endif
1601d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1602d382aafbSBarry Smith #include <stdint.h>
1603d382aafbSBarry Smith #endif
1604d382aafbSBarry Smith 
1605fcfd50ebSBarry Smith #undef __FUNCT__
1606fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1607d382aafbSBarry Smith /*@C
1608d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1609d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1610d382aafbSBarry Smith    PetscMemmove() in that case.
1611d382aafbSBarry Smith 
1612d382aafbSBarry Smith    Not Collective
1613d382aafbSBarry Smith 
1614d382aafbSBarry Smith    Input Parameters:
1615d382aafbSBarry Smith +  b - pointer to initial memory space
1616d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1617d382aafbSBarry Smith 
1618d382aafbSBarry Smith    Output Parameter:
1619d382aafbSBarry Smith .  a - pointer to copy space
1620d382aafbSBarry Smith 
1621d382aafbSBarry Smith    Level: intermediate
1622d382aafbSBarry Smith 
1623d382aafbSBarry Smith    Compile Option:
1624d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1625d382aafbSBarry Smith                                   for memory copies on double precision values.
1626d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1627d382aafbSBarry Smith                                   for memory copies on double precision values.
1628d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1629d382aafbSBarry Smith                                   for memory copies on double precision values.
1630d382aafbSBarry Smith 
1631d382aafbSBarry Smith    Note:
1632d382aafbSBarry Smith    This routine is analogous to memcpy().
1633d382aafbSBarry Smith 
1634503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1635503cfb0cSBarry Smith 
1636d382aafbSBarry Smith   Concepts: memory^copying
1637d382aafbSBarry Smith   Concepts: copying^memory
1638d382aafbSBarry Smith 
1639d382aafbSBarry Smith .seealso: PetscMemmove()
1640d382aafbSBarry Smith 
1641d382aafbSBarry Smith @*/
16427087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n)
1643d382aafbSBarry Smith {
1644d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1645d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1646d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1647a7e36092SMatthew G Knepley   PetscFunctionBegin;
1648e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1649e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1650a7e36092SMatthew G Knepley #else
1651d382aafbSBarry Smith   PetscFunctionBegin;
1652a7e36092SMatthew G Knepley #endif
1653d382aafbSBarry Smith   if (a != b) {
1654d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1655e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1656d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1657d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1658d382aafbSBarry Smith #endif
1659d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1660d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1661d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1662d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1663c5df96a5SBarry Smith       PetscBLASInt   one = 1,blen;
1664c5df96a5SBarry Smith       PetscErrorCode ierr;
1665c5df96a5SBarry Smith       ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr);
1666a83cb05cSBarry Smith       PetscStackCall("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one));
1667d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1668d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1669d382aafbSBarry Smith #else
1670d382aafbSBarry Smith       size_t      i;
1671d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1672d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1673d382aafbSBarry Smith #endif
1674d382aafbSBarry Smith     } else {
1675d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1676d382aafbSBarry Smith     }
1677d382aafbSBarry Smith #else
1678d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1679d382aafbSBarry Smith #endif
1680d382aafbSBarry Smith   }
1681d382aafbSBarry Smith   PetscFunctionReturn(0);
1682d382aafbSBarry Smith }
1683d382aafbSBarry Smith 
1684d382aafbSBarry Smith /*@C
1685d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1686d382aafbSBarry Smith 
1687d382aafbSBarry Smith    Not Collective
1688d382aafbSBarry Smith 
1689d382aafbSBarry Smith    Input Parameters:
1690d382aafbSBarry Smith +  a - pointer to beginning memory location
1691d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1692d382aafbSBarry Smith 
1693d382aafbSBarry Smith    Level: intermediate
1694d382aafbSBarry Smith 
1695d382aafbSBarry Smith    Compile Option:
1696d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1697d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1698d382aafbSBarry Smith 
1699503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1700503cfb0cSBarry Smith 
1701d382aafbSBarry Smith    Concepts: memory^zeroing
1702d382aafbSBarry Smith    Concepts: zeroing^memory
1703d382aafbSBarry Smith 
1704d382aafbSBarry Smith .seealso: PetscMemcpy()
1705d382aafbSBarry Smith @*/
17067087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1707d382aafbSBarry Smith {
1708d382aafbSBarry Smith   if (n > 0) {
1709d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1710e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1711d382aafbSBarry Smith #endif
1712d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1713d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1714d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1715d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1716d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1717d382aafbSBarry Smith     } else {
1718d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1719d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1720d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1721d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1722d382aafbSBarry Smith     } else {
1723d382aafbSBarry Smith #endif
1724d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1725d382aafbSBarry Smith       bzero((char *)a,n);
1726d382aafbSBarry Smith #else
1727d382aafbSBarry Smith       memset((char*)a,0,n);
1728d382aafbSBarry Smith #endif
1729d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1730d382aafbSBarry Smith     }
1731d382aafbSBarry Smith #endif
1732d382aafbSBarry Smith   }
1733d382aafbSBarry Smith   return 0;
1734d382aafbSBarry Smith }
1735d382aafbSBarry Smith 
1736d382aafbSBarry Smith /*MC
1737d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1738d382aafbSBarry Smith 
1739eca87e8dSBarry Smith    Synopsis:
1740f2ba6396SBarry Smith     #include "petscsys.h"
1741eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1742eca87e8dSBarry Smith 
1743d382aafbSBarry Smith    Not Collective
1744d382aafbSBarry Smith 
1745d382aafbSBarry Smith    Input Parameters:
1746d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1747d382aafbSBarry Smith .  n - number of elements to fetch
1748d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
174950d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1750d382aafbSBarry Smith 
1751d382aafbSBarry Smith    Level: developer
1752d382aafbSBarry Smith 
1753d382aafbSBarry Smith    Notes:
1754d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1755d382aafbSBarry Smith 
175650d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
175750d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
175850d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
175963cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
176063cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
176163cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1762d382aafbSBarry Smith 
1763d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1764d382aafbSBarry Smith    address).
1765d382aafbSBarry Smith 
1766d382aafbSBarry Smith    Concepts: memory
1767d382aafbSBarry Smith M*/
1768d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1769d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1770d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1771d382aafbSBarry Smith   } while (0)
1772d382aafbSBarry Smith 
1773d382aafbSBarry Smith /*
1774d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1775d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1776d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1777d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1778e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1779d382aafbSBarry Smith */
1780d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1781d382aafbSBarry Smith 
1782d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1783d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1784d382aafbSBarry Smith #endif
1785d382aafbSBarry Smith 
17865a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
17875a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1788d382aafbSBarry Smith #endif
1789d382aafbSBarry Smith 
1790d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1791d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1792d382aafbSBarry Smith #endif
1793d382aafbSBarry Smith 
1794d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1795d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1796d382aafbSBarry Smith #endif
1797d382aafbSBarry Smith 
1798d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1799d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1800d382aafbSBarry Smith #endif
1801d382aafbSBarry Smith 
1802d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1803d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1804d382aafbSBarry Smith #endif
1805d382aafbSBarry Smith 
1806d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1807d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1808d382aafbSBarry Smith #endif
1809d382aafbSBarry Smith 
1810d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1811d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1812d382aafbSBarry Smith #endif
1813d382aafbSBarry Smith 
1814d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1815d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1816d382aafbSBarry Smith #endif
1817d382aafbSBarry Smith 
1818d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1819d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1820d382aafbSBarry Smith #endif
1821d382aafbSBarry Smith 
1822d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1823d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1824d382aafbSBarry Smith #endif
1825d382aafbSBarry Smith 
1826d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1827d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1828d382aafbSBarry Smith #endif
1829d382aafbSBarry Smith 
1830d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1831d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1832d382aafbSBarry Smith #endif
1833d382aafbSBarry Smith 
1834d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1835d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1836d382aafbSBarry Smith #endif
1837d382aafbSBarry Smith 
1838d382aafbSBarry Smith #endif
1839d382aafbSBarry Smith 
1840d382aafbSBarry Smith /*
1841d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1842d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1843d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1844d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1845d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1846d382aafbSBarry Smith */
1847d382aafbSBarry Smith #if defined(__cplusplus)
1848d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1849d382aafbSBarry Smith #define EXTERN_C_END }
1850d382aafbSBarry Smith #else
1851d382aafbSBarry Smith #define EXTERN_C_BEGIN
1852d382aafbSBarry Smith #define EXTERN_C_END
1853d382aafbSBarry Smith #endif
1854d382aafbSBarry Smith 
1855d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1856d382aafbSBarry Smith 
1857d382aafbSBarry Smith /*MC
1858d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1859d382aafbSBarry Smith         communication
1860d382aafbSBarry Smith 
1861d382aafbSBarry Smith    Level: beginner
1862d382aafbSBarry Smith 
1863d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1864d382aafbSBarry Smith 
1865d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1866d382aafbSBarry Smith M*/
1867d382aafbSBarry Smith 
1868d382aafbSBarry Smith /*MC
1869d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1870d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1871d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1872d382aafbSBarry Smith 
1873d382aafbSBarry Smith 
1874d382aafbSBarry Smith    Level: beginner
1875d382aafbSBarry Smith 
1876d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1877d382aafbSBarry Smith M*/
1878d382aafbSBarry Smith 
1879d382aafbSBarry Smith /*MC
18808619c96cSJed Brown     PetscComplex - PETSc type that represents a complex number with precision matching that of PetscReal.
18818619c96cSJed Brown 
18828619c96cSJed Brown    Synopsis:
18838619c96cSJed Brown    #define PETSC_DESIRE_COMPLEX
18848619c96cSJed Brown    #include <petscsys.h>
18858619c96cSJed Brown    PetscComplex number = 1. + 2.*PETSC_i;
18868619c96cSJed Brown 
18878619c96cSJed Brown    Level: beginner
18888619c96cSJed Brown 
18898619c96cSJed Brown    Note:
18908619c96cSJed Brown    Complex numbers are automatically available if PETSc was configured --with-scalar-type=complex (in which case
18918619c96cSJed Brown    PetscComplex will match PetscScalar), otherwise the macro PETSC_DESIRE_COMPLEX must be defined before including any
18928619c96cSJed Brown    PETSc headers. If the compiler supports complex numbers, PetscComplex and associated variables and functions will be
18938619c96cSJed Brown    defined and PETSC_HAVE_COMPLEX will be set.
18948619c96cSJed Brown 
18958619c96cSJed Brown .seealso: PetscReal, PetscComplex, MPIU_COMPLEX, PetscInt, PETSC_i
18968619c96cSJed Brown M*/
18978619c96cSJed Brown 
18988619c96cSJed Brown /*MC
1899d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1900d382aafbSBarry Smith 
1901d382aafbSBarry Smith    Level: beginner
1902d382aafbSBarry Smith 
1903d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1904d382aafbSBarry Smith M*/
1905d382aafbSBarry Smith 
1906d382aafbSBarry Smith /*MC
1907d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1908d382aafbSBarry Smith    Level: beginner
1909d382aafbSBarry Smith 
1910d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1911d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1912d382aafbSBarry Smith 
1913d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1914d382aafbSBarry Smith M*/
1915d382aafbSBarry Smith 
1916d382aafbSBarry Smith /*MC
1917d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
1918d382aafbSBarry Smith 
1919d382aafbSBarry Smith    Level: beginner
1920d382aafbSBarry Smith 
1921d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
1922d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1923d382aafbSBarry Smith 
1924d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
1925d382aafbSBarry Smith M*/
1926d382aafbSBarry Smith 
1927d382aafbSBarry Smith /*MC
1928d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
1929d382aafbSBarry Smith 
1930d382aafbSBarry Smith    Level: beginner
1931d382aafbSBarry Smith 
1932d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
1933d382aafbSBarry Smith           pass this value
1934d382aafbSBarry Smith 
1935d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
1936d382aafbSBarry Smith M*/
1937d382aafbSBarry Smith 
1938d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
1939d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
1940014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1941014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1942d382aafbSBarry Smith #else
1943d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
1944d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
1945d382aafbSBarry Smith #endif
1946d382aafbSBarry Smith #endif
1947d382aafbSBarry Smith 
1948d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
1949d382aafbSBarry Smith 
1950d382aafbSBarry Smith /* Limit MPI to 32-bits */
1951d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
1952d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
1953d382aafbSBarry Smith /* Limit BLAS to 32-bits */
1954d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
1955d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
1956d382aafbSBarry Smith 
1957c5df96a5SBarry Smith #undef __FUNCT__
1958c5df96a5SBarry Smith #define __FUNCT__ "PetscBLASIntCast"
1959c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b)
1960c5df96a5SBarry Smith {
1961c5df96a5SBarry Smith   PetscFunctionBegin;
1962c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES)
1963c5df96a5SBarry Smith   if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK");
1964c5df96a5SBarry Smith #endif
1965c5df96a5SBarry Smith   *b =  (PetscBLASInt)(a);
1966c5df96a5SBarry Smith   PetscFunctionReturn(0);
1967c5df96a5SBarry Smith }
1968c5df96a5SBarry Smith 
19694dc2109aSBarry Smith #undef __FUNCT__
19704dc2109aSBarry Smith #define __FUNCT__ "PetscMPIIntCast"
19714dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b)
19724dc2109aSBarry Smith {
19734dc2109aSBarry Smith   PetscFunctionBegin;
19744dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
19754dc2109aSBarry Smith   if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI");
19764dc2109aSBarry Smith #endif
19774dc2109aSBarry Smith   *b =  (PetscMPIInt)(a);
19784dc2109aSBarry Smith   PetscFunctionReturn(0);
19794dc2109aSBarry Smith }
19804dc2109aSBarry Smith 
1981c5df96a5SBarry Smith 
1982d382aafbSBarry Smith /*
19832981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
1984d382aafbSBarry Smith */
1985d382aafbSBarry Smith #if defined(hz)
1986d382aafbSBarry Smith #undef hz
1987d382aafbSBarry Smith #endif
1988d382aafbSBarry Smith 
1989d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
1990d382aafbSBarry Smith 
1991d382aafbSBarry Smith 
1992d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
1993d382aafbSBarry Smith #include <limits.h>
1994d382aafbSBarry Smith #endif
1995d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
1996d382aafbSBarry Smith #include <sys/param.h>
1997d382aafbSBarry Smith #endif
1998d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
1999d382aafbSBarry Smith #include <sys/types.h>
2000d382aafbSBarry Smith #endif
2001d382aafbSBarry Smith #if defined(MAXPATHLEN)
2002d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2003d382aafbSBarry Smith #elif defined(MAX_PATH)
2004d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2005d382aafbSBarry Smith #elif defined(_MAX_PATH)
2006d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2007d382aafbSBarry Smith #else
2008d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2009d382aafbSBarry Smith #endif
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith /* Special support for C++ */
20122c280183SJed Brown #if defined(PETSC_CLANGUAGE_CXX) && defined(__cplusplus)
20132c8e378dSBarry Smith #include <petscsys.hh>
20142c8e378dSBarry Smith #endif
20156c7e564aSBarry Smith 
2016d382aafbSBarry Smith /*MC
2017d382aafbSBarry Smith 
2018d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2019d382aafbSBarry Smith 
2020d382aafbSBarry Smith $    1) classic Fortran 77 style
2021d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2022d382aafbSBarry Smith $       XXX variablename
2023d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2024d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2025d382aafbSBarry Smith $
2026d382aafbSBarry Smith $    2) classic Fortran 90 style
2027d1716517SSatish Balay $#include "finclude/petscXXX.h"
2028d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2029d382aafbSBarry Smith $       XXX variablename
2030d382aafbSBarry Smith $
2031d382aafbSBarry Smith $    3) Using Fortran modules
2032d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2033d382aafbSBarry Smith $         use petscXXXX
2034d382aafbSBarry Smith $       XXX variablename
2035d382aafbSBarry Smith $
2036d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2037d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2038d382aafbSBarry Smith $         use petscXXXX
2039d382aafbSBarry Smith $       type(XXX) variablename
2040e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2041d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2042d382aafbSBarry Smith 
2043d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2044d382aafbSBarry Smith 
2045d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2046d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2047d382aafbSBarry Smith $        integer variablename
2048d382aafbSBarry Smith $
2049d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2050d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2051d382aafbSBarry Smith 
2052d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2053d382aafbSBarry Smith for only a few PETSc functions.
2054d382aafbSBarry Smith 
2055d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2056d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2057d382aafbSBarry Smith you cannot have something like
2058d382aafbSBarry Smith $      PetscInt row,col
2059d382aafbSBarry Smith $      PetscScalar val
2060d382aafbSBarry Smith $        ...
2061d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2062d382aafbSBarry Smith You must instead have
2063d382aafbSBarry Smith $      PetscInt row(1),col(1)
2064d382aafbSBarry Smith $      PetscScalar val(1)
2065d382aafbSBarry Smith $        ...
2066d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2067d382aafbSBarry Smith 
2068d382aafbSBarry Smith 
2069d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2070d382aafbSBarry Smith 
2071d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2072d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2073d382aafbSBarry Smith 
2074d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2075d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2076d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2077d382aafbSBarry Smith 
2078d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2079e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2080d382aafbSBarry Smith 
2081d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2082d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2083d382aafbSBarry Smith 
2084d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2085d382aafbSBarry Smith      automatically by "make allfortranstubs".
2086d382aafbSBarry Smith 
2087e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2088d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2089d382aafbSBarry Smith      include their predecessors
2090d382aafbSBarry Smith 
2091d382aafbSBarry Smith     Level: beginner
2092d382aafbSBarry Smith 
2093d382aafbSBarry Smith M*/
2094d382aafbSBarry Smith 
2095014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2096014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2097014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2098014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2099014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2100014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
210127710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t);
2102d382aafbSBarry Smith 
2103014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2104014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
210560e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*);
2106014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2107014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2108014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2109014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
211017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]);
211117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]);
2112014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
2113014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
2114014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
2115014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2116014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2118014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2119014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2120d382aafbSBarry Smith 
2121014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2122014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2123d382aafbSBarry Smith 
212476bdecfbSBarry Smith /*J
2125d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2126d382aafbSBarry Smith        with an optional dynamic library name, for example
2127d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2128d382aafbSBarry Smith 
2129d382aafbSBarry Smith    Level: beginner
2130d382aafbSBarry Smith 
2131e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2132d382aafbSBarry Smith    with the option --download-sprng
2133d382aafbSBarry Smith 
2134d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
213576bdecfbSBarry Smith J*/
213619fd82e9SBarry Smith typedef const char* PetscRandomType;
2137d382aafbSBarry Smith #define PETSCRAND       "rand"
2138d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2139d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2140d382aafbSBarry Smith 
2141d382aafbSBarry Smith /* Logging support */
2142014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2143d382aafbSBarry Smith 
2144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]);
2145d382aafbSBarry Smith 
2146d382aafbSBarry Smith /*S
2147d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2148d382aafbSBarry Smith 
2149d382aafbSBarry Smith    Level: intermediate
2150d382aafbSBarry Smith 
2151d382aafbSBarry Smith   Concepts: random numbers
2152d382aafbSBarry Smith 
2153d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2154d382aafbSBarry Smith S*/
2155d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2156d382aafbSBarry Smith 
2157d382aafbSBarry Smith /* Dynamic creation and loading functions */
2158140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList;
2159014dd563SJed Brown PETSC_EXTERN PetscBool         PetscRandomRegisterAllCalled;
2160d382aafbSBarry Smith 
2161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []);
2162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
2163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void);
216419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType);
2165014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
216619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*);
21676d187b91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,const char[]);
2168014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2169d382aafbSBarry Smith 
2170d382aafbSBarry Smith /*MC
2171d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2172d382aafbSBarry Smith 
2173d382aafbSBarry Smith   Synopsis:
2174f2ba6396SBarry Smith     #include "petscsys.h"
21751890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2176d382aafbSBarry Smith 
2177d382aafbSBarry Smith   Not Collective
2178d382aafbSBarry Smith 
2179d382aafbSBarry Smith   Input Parameters:
2180d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2181d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2182d382aafbSBarry Smith . func_name   - The name of routine to create method context
2183d382aafbSBarry Smith - create_func - The creation routine itself
2184d382aafbSBarry Smith 
2185d382aafbSBarry Smith   Notes:
2186d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2187d382aafbSBarry Smith 
2188d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2189d382aafbSBarry Smith 
2190d382aafbSBarry Smith   Sample usage:
2191d382aafbSBarry Smith .vb
2192d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2193d382aafbSBarry Smith .ve
2194d382aafbSBarry Smith 
2195d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2196d382aafbSBarry Smith .vb
2197d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2198d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2199d382aafbSBarry Smith .ve
2200d382aafbSBarry Smith    or at runtime via the option
2201d382aafbSBarry Smith .vb
2202d382aafbSBarry Smith     -random_type my_random_name
2203d382aafbSBarry Smith .ve
2204d382aafbSBarry Smith 
2205d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2206d382aafbSBarry Smith 
2207d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2208d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2209d382aafbSBarry Smith 
2210d382aafbSBarry Smith   Level: advanced
2211d382aafbSBarry Smith 
2212d382aafbSBarry Smith .keywords: PetscRandom, register
2213d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2214d382aafbSBarry Smith M*/
2215d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2216d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2217d382aafbSBarry Smith #else
2218d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2219d382aafbSBarry Smith #endif
2220d382aafbSBarry Smith 
2221014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2226014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2228014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2230d382aafbSBarry Smith 
2231014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2232014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2234014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
2238d382aafbSBarry Smith 
2239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType);
2240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
2241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
2242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
2243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool  *);
2246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
2247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*);
2251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int);
2252d382aafbSBarry Smith 
2253d382aafbSBarry Smith /*
2254d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2255d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2256d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2257d382aafbSBarry Smith   PetscBinarySeek().
2258d382aafbSBarry Smith */
2259d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2260d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2261d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2262d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2263d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2264d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2265d382aafbSBarry Smith 
2266d382aafbSBarry Smith /*E
2267d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2268d382aafbSBarry Smith 
2269d382aafbSBarry Smith   Level: advanced
2270d382aafbSBarry Smith 
2271d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2272d382aafbSBarry Smith E*/
2273d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
2274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2277d382aafbSBarry Smith 
2278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool );
2280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
2284d382aafbSBarry Smith 
2285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2290f6ced4a3SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscInt,const PetscMPIInt*,const void*,PetscInt*,PetscMPIInt**,void*) PetscAttrMPIPointerWithType(6,3);
2291d382aafbSBarry Smith 
22926145cd65SJed Brown /*E
22936145cd65SJed Brown     PetscBuildTwoSidedType - algorithm for setting up two-sided communication
22946145cd65SJed Brown 
22956145cd65SJed Brown $  PETSC_BUILDTWOSIDED_ALLREDUCE - classical algorithm using an MPI_Allreduce with
22966145cd65SJed Brown $      a buffer of length equal to the communicator size. Not memory-scalable due to
22976145cd65SJed Brown $      the large reduction size. Requires only MPI-1.
22986145cd65SJed Brown $  PETSC_BUILDTWOSIDED_IBARRIER - nonblocking algorithm based on MPI_Issend and MPI_Ibarrier.
22996145cd65SJed Brown $      Proved communication-optimal in Hoefler, Siebert, and Lumsdaine (2010). Requires MPI-3.
23006145cd65SJed Brown 
23016145cd65SJed Brown    Level: developer
23026145cd65SJed Brown 
23036145cd65SJed Brown .seealso: PetscCommBuildTwoSided(), PetscCommBuildTwoSidedSetType(), PetscCommBuildTwoSidedGetType()
23046145cd65SJed Brown E*/
23056145cd65SJed Brown typedef enum {
23066145cd65SJed Brown   PETSC_BUILDTWOSIDED_NOTSET = -1,
23076145cd65SJed Brown   PETSC_BUILDTWOSIDED_ALLREDUCE = 0,
23086145cd65SJed Brown   PETSC_BUILDTWOSIDED_IBARRIER = 1
23096145cd65SJed Brown   /* Updates here must be accompanied by updates in finclude/petscsys.h and the string array in mpits.c */
23106145cd65SJed Brown } PetscBuildTwoSidedType;
23116145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[];
23126145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType);
23136145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*);
23146145cd65SJed Brown 
2315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2316d382aafbSBarry Smith 
2317d382aafbSBarry Smith /*E
2318d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2319d382aafbSBarry Smith 
2320d382aafbSBarry Smith   Level: beginner
2321d382aafbSBarry Smith 
2322d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2323d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2324d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2325d382aafbSBarry Smith E*/
23266fbadbe2SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;
2327d382aafbSBarry Smith 
2328d382aafbSBarry Smith /*MC
2329d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2330d382aafbSBarry Smith 
2331d382aafbSBarry Smith     Level: beginner
2332d382aafbSBarry Smith 
2333d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2334eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2335eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2336d382aafbSBarry Smith 
2337d382aafbSBarry Smith M*/
2338d382aafbSBarry Smith 
2339d382aafbSBarry Smith /*MC
2340d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2341d382aafbSBarry Smith                 value into that location
2342d382aafbSBarry Smith 
2343d382aafbSBarry Smith     Level: beginner
2344d382aafbSBarry Smith 
2345d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2346eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2347eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2348d382aafbSBarry Smith 
2349d382aafbSBarry Smith M*/
2350d382aafbSBarry Smith 
2351d382aafbSBarry Smith /*MC
2352d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2353d382aafbSBarry Smith 
2354d382aafbSBarry Smith     Level: beginner
2355d382aafbSBarry Smith 
2356d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2357d382aafbSBarry Smith 
2358d382aafbSBarry Smith M*/
2359d382aafbSBarry Smith 
2360ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject);
2361ce94432eSBarry Smith 
2362d382aafbSBarry Smith /*S
2363d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2364d382aafbSBarry Smith 
2365d382aafbSBarry Smith    Level: advanced
2366d382aafbSBarry Smith 
2367d382aafbSBarry Smith    Concepts: communicator, create
2368d382aafbSBarry Smith S*/
2369d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2370d382aafbSBarry Smith 
2371d382aafbSBarry Smith struct _n_PetscSubcomm {
2372d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2373d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2374d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2375d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2376d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2377d382aafbSBarry Smith };
2378d382aafbSBarry Smith 
2379638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
23806a6fc655SJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[];
2381638faf0bSHong Zhang 
2382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
2386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2387d382aafbSBarry Smith 
23889e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
23899e03d832SJed Brown #undef __FUNCT__
23909e03d832SJed Brown #define __FUNCT__ "User provided function"
23919e03d832SJed Brown 
2392d382aafbSBarry Smith #endif
2393