1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1720c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 1805035670SJunchao Zhang #define PETSC_HAVE_DEVICE 1905035670SJunchao Zhang #endif 2005035670SJunchao Zhang 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith /* 442c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 45d382aafbSBarry Smith */ 461ec50b02SJed Brown #if defined(__cplusplus) 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 481ec50b02SJed Brown #else 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 501ec50b02SJed Brown #endif 51d382aafbSBarry Smith 52c5e4d11fSDmitry Karpeev /* ========================================================================== */ 53c5e4d11fSDmitry Karpeev /* 54c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 551cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 561cc8b206SBarry Smith file within an extern "C". 57c5e4d11fSDmitry Karpeev */ 58c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 59c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 60c5e4d11fSDmitry Karpeev #endif 61c5e4d11fSDmitry Karpeev 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ed938b00SJed Brown #if defined(__cplusplus) 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 70ed938b00SJed Brown #else 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 72ed938b00SJed Brown #endif 73ed938b00SJed Brown 7458c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7558c433abSLisandro Dalcin 76ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 77014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 78014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8126703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8226703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8326703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 85014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 86014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 88d382aafbSBarry Smith #else 89014dd563SJed Brown # define PETSC_DLLEXPORT 90014dd563SJed Brown # define PETSC_DLLIMPORT 9121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 92014dd563SJed Brown #endif 93014dd563SJed Brown 94014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 96014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 98014dd563SJed Brown #endif 99014dd563SJed Brown 1001cc8b206SBarry Smith /* 1011cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1021cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1031cc8b206SBarry Smith used from C and are always visible in the shared libraries 1041cc8b206SBarry Smith */ 1052c280183SJed Brown #if defined(__cplusplus) 106014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10821f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 109014dd563SJed Brown #else 110014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 111638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1126258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 113d382aafbSBarry Smith #endif 11427710113SBarry Smith 1152c8e378dSBarry Smith #include <petscversion.h> 116a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 117d382aafbSBarry Smith 118d382aafbSBarry Smith /* ========================================================================== */ 119d382aafbSBarry Smith 120d382aafbSBarry Smith /* 121d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 122d382aafbSBarry Smith 123d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 124d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 125d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 126d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 127d382aafbSBarry Smith mpicxx.h directly in their code 128d382aafbSBarry Smith */ 129fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 130d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 131fa9e63e2SJed Brown #endif 132fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 133d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 134fa9e63e2SJed Brown #endif 135e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 136e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 137e771154cSJed Brown #else 1382c8e378dSBarry Smith # include <mpi.h> 139e771154cSJed Brown #endif 14065013866SBarry Smith 1414e1ad211SJed Brown /*MC 1424e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1434e1ad211SJed Brown 1444e1ad211SJed Brown Notes: 1454e1ad211SJed Brown Typical usage is within normal code, 1464e1ad211SJed Brown 1474e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1484e1ad211SJed Brown 1494e1ad211SJed Brown but can also be used in the preprocessor, 1504e1ad211SJed Brown 1514e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1524e1ad211SJed Brown $ ... 1534e1ad211SJed Brown $ #else 1544e1ad211SJed Brown 1554e1ad211SJed Brown Either way evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1) or undefined. This macro 1564e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1574e1ad211SJed Brown 1584e1ad211SJed Brown Developer Notes: 1594e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1604e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1614e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1624e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1634e1ad211SJed Brown 1644e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1654e1ad211SJed Brown implementation of variadic macros. 1664e1ad211SJed Brown 1674e1ad211SJed Brown Level: developer 1684e1ad211SJed Brown M*/ 1694e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1704e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1714e1ad211SJed Brown # define PetscDefined_arg_ shift, 1724e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1734e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1744e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1754e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1764e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1774e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1784e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1794e1ad211SJed Brown #endif 1804e1ad211SJed Brown 181d382aafbSBarry Smith /* 182a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 183a7886beaSBarry Smith This usually happens because 184a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 185a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 186a7886beaSBarry Smith */ 187a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 188c9b973beSBarry Smith # if !defined(MPIUNI_H) 189a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 190a7886beaSBarry Smith # endif 19141f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 19241f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 19341f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 19441f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 19541f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 19641f4af4cSSatish Balay # endif 19741f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 19841f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 19941f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 20041f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 20141f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 20241f4af4cSSatish Balay # endif 203a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 20441f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 205a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 206ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 207a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 208a7886beaSBarry Smith # endif 209a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 210a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 211a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 212ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 213c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 214a7886beaSBarry Smith # endif 215d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 216d97fd468SStefano Zampini # if !defined(MSMPI_VER) 217d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 218d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 219d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 220d97fd468SStefano Zampini # endif 221d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 222d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 223a7886beaSBarry Smith #endif 224a7886beaSBarry Smith 225a7886beaSBarry Smith /* 2262981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 227d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 228d382aafbSBarry Smith */ 229d382aafbSBarry Smith #include <stdio.h> 230d382aafbSBarry Smith 231d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 232d382aafbSBarry Smith #if !defined(MPIAPI) 233d382aafbSBarry Smith #define MPIAPI 234d382aafbSBarry Smith #endif 235d382aafbSBarry Smith 2361cc8b206SBarry Smith /* 2371cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2381cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2391cc8b206SBarry Smith does not match the actual type of the argument being passed in 2401cc8b206SBarry Smith */ 241c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 242894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 243894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2448ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2458ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 246894dd566SJed Brown # endif 247894dd566SJed Brown #endif 248894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 249894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2508ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2518ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 252894dd566SJed Brown #endif 253b3506946SBarry Smith 2545a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 255df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 256e28ce29aSPatrick Sanan 257e28ce29aSPatrick Sanan /*MC 258e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 259e28ce29aSPatrick Sanan 260e28ce29aSPatrick Sanan Notes: 261e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 262e28ce29aSPatrick Sanan 263e28ce29aSPatrick Sanan Level: beginner 264e28ce29aSPatrick Sanan 265e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 266e28ce29aSPatrick Sanan M*/ 267e28ce29aSPatrick Sanan 26837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 269bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 270a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 271fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 272bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 273a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 274f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 275bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 276a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 277236ed0a3SSatish Balay #else 278bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 279236ed0a3SSatish Balay #endif 280b7b8f77aSBarry Smith 2817cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 282b7b8f77aSBarry Smith 283d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 284bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 285a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 286d382aafbSBarry Smith #else 287d382aafbSBarry Smith # define MPIU_INT MPI_INT 288a05e1a72SSatish Balay # define PetscInt_FMT "d" 289d382aafbSBarry Smith #endif 290d382aafbSBarry Smith 291503cfb0cSBarry Smith /* 292503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 293503cfb0cSBarry Smith */ 294e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 295d382aafbSBarry Smith 296d382aafbSBarry Smith /* 297d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 298d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 299d382aafbSBarry Smith */ 300014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 301d382aafbSBarry Smith 302d382aafbSBarry Smith /* 303d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 304d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 305d382aafbSBarry Smith */ 306014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 307d382aafbSBarry Smith 308d382aafbSBarry Smith /*MC 309d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 310d382aafbSBarry Smith 311d382aafbSBarry Smith Synopsis: 312aaa7dc30SBarry Smith #include <petscsys.h> 313ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 314d382aafbSBarry Smith 315eca87e8dSBarry Smith Not Collective 316eca87e8dSBarry Smith 317d382aafbSBarry Smith Input Parameters: 318d382aafbSBarry Smith . cond - condition or expression 319d382aafbSBarry Smith 320e28ce29aSPatrick Sanan Notes: 321e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 322d382aafbSBarry Smith branch is unlikely. 323d382aafbSBarry Smith 324d382aafbSBarry Smith Level: advanced 325d382aafbSBarry Smith 326cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 327d382aafbSBarry Smith M*/ 328d382aafbSBarry Smith 329d382aafbSBarry Smith /*MC 330d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 331d382aafbSBarry Smith 332d382aafbSBarry Smith Synopsis: 333aaa7dc30SBarry Smith #include <petscsys.h> 33423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 335d382aafbSBarry Smith 336eca87e8dSBarry Smith Not Collective 337eca87e8dSBarry Smith 338d382aafbSBarry Smith Input Parameters: 339d382aafbSBarry Smith . cond - condition or expression 340d382aafbSBarry Smith 341e28ce29aSPatrick Sanan Notes: 342e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 343d382aafbSBarry Smith branch is likely. 344d382aafbSBarry Smith 345d382aafbSBarry Smith Level: advanced 346d382aafbSBarry Smith 347d382aafbSBarry Smith .seealso: PetscUnlikely() 348d382aafbSBarry Smith M*/ 349d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 350d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 351d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 352d382aafbSBarry Smith #else 353cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 354cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 355d382aafbSBarry Smith #endif 356d382aafbSBarry Smith 357cf9c20a2SJed Brown /*MC 358cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 359cf9c20a2SJed Brown 360cf9c20a2SJed Brown Synopsis: 361cf9c20a2SJed Brown #include <petscsys.h> 362cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 363cf9c20a2SJed Brown 364cf9c20a2SJed Brown Not Collective 365cf9c20a2SJed Brown 366cf9c20a2SJed Brown Input Parameters: 367cf9c20a2SJed Brown . cond - condition or expression 368cf9c20a2SJed Brown 369cf9c20a2SJed Brown Notes: 370cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 371cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 372cf9c20a2SJed Brown 373cf9c20a2SJed Brown Level: advanced 374cf9c20a2SJed Brown 375cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 376cf9c20a2SJed Brown M*/ 377cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 378cf9c20a2SJed Brown 379c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 380c8b9133aSSatish Balay 381c8b9133aSSatish Balay #if defined(__INTEL_COMPILER) && !defined(_WIN32) 382c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 383c8b9133aSSatish Balay #elif defined(__GNUC__) && __GNUC__ >= 5 384c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 385c8b9133aSSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 386c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 387c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 388c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 389c8b9133aSSatish Balay #else 390c8b9133aSSatish Balay # define PetscPragmaSIMD 391c8b9133aSSatish Balay #endif 392c8b9133aSSatish Balay 393d382aafbSBarry Smith /* 394d382aafbSBarry Smith Declare extern C stuff after including external header files 395d382aafbSBarry Smith */ 396d382aafbSBarry Smith 3976a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 39870b3c8c7SBarry Smith 3998b49ba18SBarry Smith /* 400390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4018b49ba18SBarry Smith */ 4028b49ba18SBarry Smith #include <petscmath.h> 4038b49ba18SBarry Smith 4046a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 405d382aafbSBarry Smith 406d382aafbSBarry Smith /*MC 4070298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 408d382aafbSBarry Smith 409d382aafbSBarry Smith Level: beginner 410d382aafbSBarry Smith 411e28ce29aSPatrick Sanan Note: 412e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 413d382aafbSBarry Smith some default 414d382aafbSBarry Smith 415e28ce29aSPatrick Sanan Fortran Notes: 416e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 417d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 418d382aafbSBarry Smith 419e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 420d382aafbSBarry Smith 421d382aafbSBarry Smith M*/ 4220298fd71SBarry Smith #define PETSC_IGNORE NULL 423d382aafbSBarry Smith 424c528d872SBarry Smith /* This is deprecated */ 425c528d872SBarry Smith #define PETSC_NULL NULL 426c528d872SBarry Smith 427d382aafbSBarry Smith /*MC 428557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 429557d4da8SBarry Smith where you wish PETSc to use the default. 430557d4da8SBarry Smith 431557d4da8SBarry Smith Level: beginner 432557d4da8SBarry Smith 433e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 434557d4da8SBarry Smith 435557d4da8SBarry Smith M*/ 436557d4da8SBarry Smith #define PETSC_DECIDE -1 437557d4da8SBarry Smith 438557d4da8SBarry Smith /*MC 439d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 440d382aafbSBarry Smith where you wish PETSc to compute the required value. 441d382aafbSBarry Smith 442d382aafbSBarry Smith Level: beginner 443d382aafbSBarry Smith 444e28ce29aSPatrick Sanan Developer Note: 445e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 446557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 447557d4da8SBarry Smith 4480298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 449d382aafbSBarry Smith 450d382aafbSBarry Smith M*/ 451d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 452d382aafbSBarry Smith 453d382aafbSBarry Smith /*MC 454557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 455557d4da8SBarry Smith where you wish PETSc to use the default. 456557d4da8SBarry Smith 457557d4da8SBarry Smith Level: beginner 458557d4da8SBarry Smith 459e28ce29aSPatrick Sanan Fortran Notes: 460e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 461557d4da8SBarry Smith 4620298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 463557d4da8SBarry Smith 464557d4da8SBarry Smith M*/ 465557d4da8SBarry Smith #define PETSC_DEFAULT -2 466557d4da8SBarry Smith 467557d4da8SBarry Smith /*MC 468d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 469ea8fe74dSBarry Smith all the processes that PETSc knows about. 470d382aafbSBarry Smith 471d382aafbSBarry Smith Level: beginner 472d382aafbSBarry Smith 473e28ce29aSPatrick Sanan Notes: 474e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 475d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 476d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 477a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 478a990b902SBarry Smith 479a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 480a990b902SBarry Smith is called because it may not have a valid value yet. 481d382aafbSBarry Smith 482d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 483d382aafbSBarry Smith 484d382aafbSBarry Smith M*/ 485014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 486d382aafbSBarry Smith 487d382aafbSBarry Smith /*MC 488503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 489d382aafbSBarry Smith 490d382aafbSBarry Smith Level: beginner 491d382aafbSBarry Smith 492e28ce29aSPatrick Sanan Notes: 493e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 494a990b902SBarry Smith 495d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 496d382aafbSBarry Smith 497d382aafbSBarry Smith M*/ 498d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 499d382aafbSBarry Smith 5006de5d289SStefano Zampini /*MC 5016de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5026de5d289SStefano Zampini MPI with MPI_Init_thread. 5036de5d289SStefano Zampini 5046de5d289SStefano Zampini Level: beginner 5056de5d289SStefano Zampini 5066de5d289SStefano Zampini Notes: 5076de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5086de5d289SStefano Zampini 5096de5d289SStefano Zampini .seealso: PetscInitialize() 5106de5d289SStefano Zampini 5116de5d289SStefano Zampini M*/ 5126de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5136de5d289SStefano Zampini 514d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5158ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 516014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 517014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5184cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 519d382aafbSBarry Smith 520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 523d382aafbSBarry Smith 5247381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 52505035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 526cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5273c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5287381773fSBarry Smith #endif 5297381773fSBarry Smith 53005035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 53105035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 53205035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5333c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 53405035670SJunchao Zhang #endif 53505035670SJunchao Zhang 536540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 537540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 538540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 539540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 540540e20f2SPierre Jolivet #endif 541540e20f2SPierre Jolivet 542d382aafbSBarry Smith /*MC 54395dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 544d382aafbSBarry Smith 545eca87e8dSBarry Smith Synopsis: 546aaa7dc30SBarry Smith #include <petscsys.h> 547eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 548eca87e8dSBarry Smith 549eca87e8dSBarry Smith Not Collective 550eca87e8dSBarry Smith 551d382aafbSBarry Smith Input Parameter: 552d382aafbSBarry Smith . m - number of bytes to allocate 553d382aafbSBarry Smith 554d382aafbSBarry Smith Output Parameter: 555d382aafbSBarry Smith . result - memory allocated 556d382aafbSBarry Smith 557d382aafbSBarry Smith Level: beginner 558d382aafbSBarry Smith 55949d7da52SJed Brown Notes: 56049d7da52SJed Brown Memory is always allocated at least double aligned 561d382aafbSBarry Smith 56249d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 563d382aafbSBarry Smith 564d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 565d382aafbSBarry Smith 566d382aafbSBarry Smith M*/ 567071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 568d382aafbSBarry Smith 569d382aafbSBarry Smith /*MC 5703221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5713221ece2SMatthew G. Knepley 5723221ece2SMatthew G. Knepley Synopsis: 5733221ece2SMatthew G. Knepley #include <petscsys.h> 5743221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5753221ece2SMatthew G. Knepley 5763221ece2SMatthew G. Knepley Not Collective 5773221ece2SMatthew G. Knepley 5783221ece2SMatthew G. Knepley Input Parameters: 5793221ece2SMatthew G. Knepley + m - number of bytes to allocate 58092f119d6SBarry Smith - result - previous memory 5813221ece2SMatthew G. Knepley 5823221ece2SMatthew G. Knepley Output Parameter: 5833221ece2SMatthew G. Knepley . result - new memory allocated 5843221ece2SMatthew G. Knepley 5853221ece2SMatthew G. Knepley Level: developer 5863221ece2SMatthew G. Knepley 5873221ece2SMatthew G. Knepley Notes: 5883221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 5893221ece2SMatthew G. Knepley 5903221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 5913221ece2SMatthew G. Knepley 5923221ece2SMatthew G. Knepley M*/ 5933221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 5943221ece2SMatthew G. Knepley 5953221ece2SMatthew G. Knepley /*MC 596503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 597d382aafbSBarry Smith 598d382aafbSBarry Smith Synopsis: 599aaa7dc30SBarry Smith #include <petscsys.h> 600d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 601d382aafbSBarry Smith 602eca87e8dSBarry Smith Not Collective 603eca87e8dSBarry Smith 604eca87e8dSBarry Smith Input Parameters: 605eca87e8dSBarry Smith . addr - address to align (any pointer type) 606eca87e8dSBarry Smith 607d382aafbSBarry Smith Level: developer 608d382aafbSBarry Smith 609d382aafbSBarry Smith .seealso: PetscMallocAlign() 610d382aafbSBarry Smith 611d382aafbSBarry Smith M*/ 612d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 613d382aafbSBarry Smith 614d382aafbSBarry Smith /*MC 615785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 616d382aafbSBarry Smith 617eca87e8dSBarry Smith Synopsis: 618aaa7dc30SBarry Smith #include <petscsys.h> 619785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 620785e854fSJed Brown 621785e854fSJed Brown Not Collective 622785e854fSJed Brown 623785e854fSJed Brown Input Parameter: 624390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 625785e854fSJed Brown 626785e854fSJed Brown Output Parameter: 6271fe1b817SJunchao Zhang . r1 - memory allocated 628785e854fSJed Brown 629e28ce29aSPatrick Sanan Note: 630e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 631390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 632390e1bf2SBarry Smith $ PetscInt *id; 633390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 634390e1bf2SBarry Smith not 635390e1bf2SBarry Smith $ PetscInt *id; 636390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 637390e1bf2SBarry Smith 6381fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 639390e1bf2SBarry Smith 640390e1bf2SBarry Smith Level: beginner 641785e854fSJed Brown 6421795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 643785e854fSJed Brown 644785e854fSJed Brown M*/ 6452553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 646785e854fSJed Brown 647785e854fSJed Brown /*MC 6481795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6491795a4d1SJed Brown 6501795a4d1SJed Brown Synopsis: 651aaa7dc30SBarry Smith #include <petscsys.h> 6521795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6531795a4d1SJed Brown 6541795a4d1SJed Brown Not Collective 6551795a4d1SJed Brown 6561795a4d1SJed Brown Input Parameter: 6571795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6581795a4d1SJed Brown 6591795a4d1SJed Brown Output Parameter: 6601fe1b817SJunchao Zhang . r1 - memory allocated 6611795a4d1SJed Brown 662e28ce29aSPatrick Sanan Notes: 663e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 664390e1bf2SBarry Smith 665390e1bf2SBarry Smith Level: beginner 6661795a4d1SJed Brown 6671795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6681795a4d1SJed Brown 6691795a4d1SJed Brown M*/ 6702553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 6711795a4d1SJed Brown 6721795a4d1SJed Brown /*MC 673dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 674d382aafbSBarry Smith 675eca87e8dSBarry Smith Synopsis: 676aaa7dc30SBarry Smith #include <petscsys.h> 677dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 678eca87e8dSBarry Smith 679eca87e8dSBarry Smith Not Collective 680eca87e8dSBarry Smith 681d382aafbSBarry Smith Input Parameter: 682d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 683dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 684d382aafbSBarry Smith 685d382aafbSBarry Smith Output Parameter: 686d382aafbSBarry Smith + r1 - memory allocated in first chunk 687d382aafbSBarry Smith - r2 - memory allocated in second chunk 688d382aafbSBarry Smith 689d382aafbSBarry Smith Level: developer 690d382aafbSBarry Smith 6911795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 692d382aafbSBarry Smith 693d382aafbSBarry Smith M*/ 6942553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 695d382aafbSBarry Smith 696d382aafbSBarry Smith /*MC 6971795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 698d382aafbSBarry Smith 699eca87e8dSBarry Smith Synopsis: 700aaa7dc30SBarry Smith #include <petscsys.h> 7011795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 702eca87e8dSBarry Smith 703eca87e8dSBarry Smith Not Collective 704eca87e8dSBarry Smith 705d382aafbSBarry Smith Input Parameter: 706d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7071795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7081795a4d1SJed Brown 7091795a4d1SJed Brown Output Parameter: 7101795a4d1SJed Brown + r1 - memory allocated in first chunk 7111795a4d1SJed Brown - r2 - memory allocated in second chunk 7121795a4d1SJed Brown 7131795a4d1SJed Brown Level: developer 7141795a4d1SJed Brown 7151795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7161795a4d1SJed Brown 7171795a4d1SJed Brown M*/ 7182553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7191795a4d1SJed Brown 7201795a4d1SJed Brown /*MC 721dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 722d382aafbSBarry Smith 723d382aafbSBarry Smith Synopsis: 724aaa7dc30SBarry Smith #include <petscsys.h> 725dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 726d382aafbSBarry Smith 727d382aafbSBarry Smith Not Collective 728d382aafbSBarry Smith 729d382aafbSBarry Smith Input Parameter: 730d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 731d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 732dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 733d382aafbSBarry Smith 734d382aafbSBarry Smith Output Parameter: 735d382aafbSBarry Smith + r1 - memory allocated in first chunk 736d382aafbSBarry Smith . r2 - memory allocated in second chunk 737d382aafbSBarry Smith - r3 - memory allocated in third chunk 738d382aafbSBarry Smith 739d382aafbSBarry Smith Level: developer 740d382aafbSBarry Smith 7411795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 742d382aafbSBarry Smith 743d382aafbSBarry Smith M*/ 7442553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 745d382aafbSBarry Smith 746d382aafbSBarry Smith /*MC 7471795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 748d382aafbSBarry Smith 749eca87e8dSBarry Smith Synopsis: 750aaa7dc30SBarry Smith #include <petscsys.h> 7511795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 752eca87e8dSBarry Smith 753eca87e8dSBarry Smith Not Collective 754eca87e8dSBarry Smith 755d382aafbSBarry Smith Input Parameter: 756d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 757d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7581795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7591795a4d1SJed Brown 7601795a4d1SJed Brown Output Parameter: 7611795a4d1SJed Brown + r1 - memory allocated in first chunk 7621795a4d1SJed Brown . r2 - memory allocated in second chunk 7631795a4d1SJed Brown - r3 - memory allocated in third chunk 7641795a4d1SJed Brown 7651795a4d1SJed Brown Level: developer 7661795a4d1SJed Brown 7671795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7681795a4d1SJed Brown 7691795a4d1SJed Brown M*/ 7702553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 7711795a4d1SJed Brown 7721795a4d1SJed Brown /*MC 773dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 774d382aafbSBarry Smith 775d382aafbSBarry Smith Synopsis: 776aaa7dc30SBarry Smith #include <petscsys.h> 777dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 778d382aafbSBarry Smith 779d382aafbSBarry Smith Not Collective 780d382aafbSBarry Smith 781d382aafbSBarry Smith Input Parameter: 782d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 783d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 784d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 785dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 786d382aafbSBarry Smith 787d382aafbSBarry Smith Output Parameter: 788d382aafbSBarry Smith + r1 - memory allocated in first chunk 789d382aafbSBarry Smith . r2 - memory allocated in second chunk 790d382aafbSBarry Smith . r3 - memory allocated in third chunk 791d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 792d382aafbSBarry Smith 793d382aafbSBarry Smith Level: developer 794d382aafbSBarry Smith 7951795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 796d382aafbSBarry Smith 797d382aafbSBarry Smith M*/ 7982553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 799d382aafbSBarry Smith 800d382aafbSBarry Smith /*MC 8011795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 802d382aafbSBarry Smith 803eca87e8dSBarry Smith Synopsis: 804aaa7dc30SBarry Smith #include <petscsys.h> 8051795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 806eca87e8dSBarry Smith 807eca87e8dSBarry Smith Not Collective 808eca87e8dSBarry Smith 809e28ce29aSPatrick Sanan Input Parameters: 810d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 811d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 812d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8131795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8141795a4d1SJed Brown 815e28ce29aSPatrick Sanan Output Parameters: 8161795a4d1SJed Brown + r1 - memory allocated in first chunk 8171795a4d1SJed Brown . r2 - memory allocated in second chunk 8181795a4d1SJed Brown . r3 - memory allocated in third chunk 8191795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8201795a4d1SJed Brown 8211795a4d1SJed Brown Level: developer 8221795a4d1SJed Brown 8231795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8241795a4d1SJed Brown 8251795a4d1SJed Brown M*/ 8262553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8271795a4d1SJed Brown 8281795a4d1SJed Brown /*MC 829dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 830d382aafbSBarry Smith 831d382aafbSBarry Smith Synopsis: 832aaa7dc30SBarry Smith #include <petscsys.h> 833dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 834d382aafbSBarry Smith 835d382aafbSBarry Smith Not Collective 836d382aafbSBarry Smith 837e28ce29aSPatrick Sanan Input Parameters: 838d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 839d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 840d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 841d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 842dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 843d382aafbSBarry Smith 844e28ce29aSPatrick Sanan Output Parameters: 845d382aafbSBarry Smith + r1 - memory allocated in first chunk 846d382aafbSBarry Smith . r2 - memory allocated in second chunk 847d382aafbSBarry Smith . r3 - memory allocated in third chunk 848d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 849d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 850d382aafbSBarry Smith 851d382aafbSBarry Smith Level: developer 852d382aafbSBarry Smith 8531795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 854d382aafbSBarry Smith 855d382aafbSBarry Smith M*/ 8562553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 857d382aafbSBarry Smith 858d382aafbSBarry Smith /*MC 8591795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 860d382aafbSBarry Smith 861eca87e8dSBarry Smith Synopsis: 862aaa7dc30SBarry Smith #include <petscsys.h> 8631795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 864eca87e8dSBarry Smith 865eca87e8dSBarry Smith Not Collective 866eca87e8dSBarry Smith 867e28ce29aSPatrick Sanan Input Parameters: 868d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 869d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 870d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 871d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 8721795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 8731795a4d1SJed Brown 874e28ce29aSPatrick Sanan Output Parameters: 8751795a4d1SJed Brown + r1 - memory allocated in first chunk 8761795a4d1SJed Brown . r2 - memory allocated in second chunk 8771795a4d1SJed Brown . r3 - memory allocated in third chunk 8781795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8791795a4d1SJed Brown - r5 - memory allocated in fifth chunk 8801795a4d1SJed Brown 8811795a4d1SJed Brown Level: developer 8821795a4d1SJed Brown 8831795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 8841795a4d1SJed Brown 8851795a4d1SJed Brown M*/ 8862553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 887d382aafbSBarry Smith 888d382aafbSBarry Smith /*MC 889dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 890d382aafbSBarry Smith 891d382aafbSBarry Smith Synopsis: 892aaa7dc30SBarry Smith #include <petscsys.h> 893dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 894d382aafbSBarry Smith 895d382aafbSBarry Smith Not Collective 896d382aafbSBarry Smith 897e28ce29aSPatrick Sanan Input Parameters: 898d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 899d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 900d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 901d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 902d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 903dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 904d382aafbSBarry Smith 905e28ce29aSPatrick Sanan Output Parameteasr: 906d382aafbSBarry Smith + r1 - memory allocated in first chunk 907d382aafbSBarry Smith . r2 - memory allocated in second chunk 908d382aafbSBarry Smith . r3 - memory allocated in third chunk 909d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 910d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 911d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 912d382aafbSBarry Smith 913d382aafbSBarry Smith Level: developer 914d382aafbSBarry Smith 9151795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 916d382aafbSBarry Smith 917d382aafbSBarry Smith M*/ 9182553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 919d382aafbSBarry Smith 920d382aafbSBarry Smith /*MC 9211795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 922d382aafbSBarry Smith 923eca87e8dSBarry Smith Synopsis: 924aaa7dc30SBarry Smith #include <petscsys.h> 9251795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 926eca87e8dSBarry Smith 927eca87e8dSBarry Smith Not Collective 928eca87e8dSBarry Smith 929e28ce29aSPatrick Sanan Input Parameters: 930d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 931d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 932d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 933d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 934d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9351795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9361795a4d1SJed Brown 937e28ce29aSPatrick Sanan Output Parameters: 9381795a4d1SJed Brown + r1 - memory allocated in first chunk 9391795a4d1SJed Brown . r2 - memory allocated in second chunk 9401795a4d1SJed Brown . r3 - memory allocated in third chunk 9411795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9421795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9431795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9441795a4d1SJed Brown 9451795a4d1SJed Brown Level: developer 9461795a4d1SJed Brown 9471795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9481795a4d1SJed Brown 9491795a4d1SJed Brown M*/ 9502553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9511795a4d1SJed Brown 9521795a4d1SJed Brown /*MC 953dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 954d382aafbSBarry Smith 955d382aafbSBarry Smith Synopsis: 956aaa7dc30SBarry Smith #include <petscsys.h> 957dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 958d382aafbSBarry Smith 959d382aafbSBarry Smith Not Collective 960d382aafbSBarry Smith 961e28ce29aSPatrick Sanan Input Parameters: 962d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 963d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 964d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 965d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 966d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 967d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 968dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 969d382aafbSBarry Smith 970e28ce29aSPatrick Sanan Output Parameters: 971d382aafbSBarry Smith + r1 - memory allocated in first chunk 972d382aafbSBarry Smith . r2 - memory allocated in second chunk 973d382aafbSBarry Smith . r3 - memory allocated in third chunk 974d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 975d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 976d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 977eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 978d382aafbSBarry Smith 979d382aafbSBarry Smith Level: developer 980d382aafbSBarry Smith 9811795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 982d382aafbSBarry Smith 983d382aafbSBarry Smith M*/ 9842553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 985d382aafbSBarry Smith 986d382aafbSBarry Smith /*MC 9871795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 9881795a4d1SJed Brown 9891795a4d1SJed Brown Synopsis: 990aaa7dc30SBarry Smith #include <petscsys.h> 9911795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 9921795a4d1SJed Brown 9931795a4d1SJed Brown Not Collective 9941795a4d1SJed Brown 995e28ce29aSPatrick Sanan Input Parameters: 9961795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 9971795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 9981795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 9991795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10001795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10011795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10021795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10031795a4d1SJed Brown 1004e28ce29aSPatrick Sanan Output Parameters: 10051795a4d1SJed Brown + r1 - memory allocated in first chunk 10061795a4d1SJed Brown . r2 - memory allocated in second chunk 10071795a4d1SJed Brown . r3 - memory allocated in third chunk 10081795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10091795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10101795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10111795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10121795a4d1SJed Brown 10131795a4d1SJed Brown Level: developer 10141795a4d1SJed Brown 10151795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10161795a4d1SJed Brown 10171795a4d1SJed Brown M*/ 10182553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10191795a4d1SJed Brown 10201795a4d1SJed Brown /*MC 1021503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1022d382aafbSBarry Smith 1023eca87e8dSBarry Smith Synopsis: 1024aaa7dc30SBarry Smith #include <petscsys.h> 1025b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1026eca87e8dSBarry Smith 1027eca87e8dSBarry Smith Not Collective 1028eca87e8dSBarry Smith 1029d382aafbSBarry Smith Output Parameter: 1030b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1031d382aafbSBarry Smith 1032d382aafbSBarry Smith Level: beginner 1033d382aafbSBarry Smith 1034390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1035d382aafbSBarry Smith 1036d382aafbSBarry Smith M*/ 1037b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1038ad0619ddSBarry Smith 1039ad0619ddSBarry Smith /*MC 1040b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1041ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1042ad0619ddSBarry Smith 1043ad0619ddSBarry Smith Synopsis: 1044aaa7dc30SBarry Smith #include <petscsys.h> 1045b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1046ad0619ddSBarry Smith 1047ad0619ddSBarry Smith Not Collective 1048ad0619ddSBarry Smith 1049ad0619ddSBarry Smith Input Parameter: 1050b00a9115SJed Brown . obj - object memory is logged to 1051ad0619ddSBarry Smith 1052ad0619ddSBarry Smith Output Parameter: 1053b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1054ad0619ddSBarry Smith 1055ad0619ddSBarry Smith Level: developer 1056ad0619ddSBarry Smith 1057390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1058ad0619ddSBarry Smith 1059ad0619ddSBarry Smith M*/ 1060d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1061d382aafbSBarry Smith 1062d382aafbSBarry Smith /*MC 1063d382aafbSBarry Smith PetscFree - Frees memory 1064d382aafbSBarry Smith 1065eca87e8dSBarry Smith Synopsis: 1066aaa7dc30SBarry Smith #include <petscsys.h> 1067eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1068eca87e8dSBarry Smith 1069eca87e8dSBarry Smith Not Collective 1070eca87e8dSBarry Smith 1071d382aafbSBarry Smith Input Parameter: 10727f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1073d382aafbSBarry Smith 1074d382aafbSBarry Smith Level: beginner 1075d382aafbSBarry Smith 107649d7da52SJed Brown Notes: 1077390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1078390e1bf2SBarry Smith 107949d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1080d382aafbSBarry Smith 1081390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1082d382aafbSBarry Smith 1083d382aafbSBarry Smith M*/ 1084ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1085d382aafbSBarry Smith 1086d382aafbSBarry Smith /*MC 1087d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1088d382aafbSBarry Smith 1089eca87e8dSBarry Smith Synopsis: 1090aaa7dc30SBarry Smith #include <petscsys.h> 1091eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1092eca87e8dSBarry Smith 1093eca87e8dSBarry Smith Not Collective 1094eca87e8dSBarry Smith 1095e28ce29aSPatrick Sanan Input Parameters: 1096d382aafbSBarry Smith + memory1 - memory to free 1097d382aafbSBarry Smith - memory2 - 2nd memory to free 1098d382aafbSBarry Smith 1099d382aafbSBarry Smith Level: developer 1100d382aafbSBarry Smith 110195452b02SPatrick Sanan Notes: 110295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1103d382aafbSBarry Smith 1104d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1105d382aafbSBarry Smith 1106d382aafbSBarry Smith M*/ 1107ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1108d382aafbSBarry Smith 1109d382aafbSBarry Smith /*MC 1110d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1111d382aafbSBarry Smith 1112eca87e8dSBarry Smith Synopsis: 1113aaa7dc30SBarry Smith #include <petscsys.h> 1114eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1115eca87e8dSBarry Smith 1116eca87e8dSBarry Smith Not Collective 1117eca87e8dSBarry Smith 1118e28ce29aSPatrick Sanan Input Parameters: 1119d382aafbSBarry Smith + memory1 - memory to free 1120d382aafbSBarry Smith . memory2 - 2nd memory to free 1121d382aafbSBarry Smith - memory3 - 3rd memory to free 1122d382aafbSBarry Smith 1123d382aafbSBarry Smith Level: developer 1124d382aafbSBarry Smith 112595452b02SPatrick Sanan Notes: 112695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1127d382aafbSBarry Smith 1128d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1129d382aafbSBarry Smith 1130d382aafbSBarry Smith M*/ 1131ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1132d382aafbSBarry Smith 1133d382aafbSBarry Smith /*MC 1134d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1135d382aafbSBarry Smith 1136eca87e8dSBarry Smith Synopsis: 1137aaa7dc30SBarry Smith #include <petscsys.h> 1138eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1139eca87e8dSBarry Smith 1140eca87e8dSBarry Smith Not Collective 1141eca87e8dSBarry Smith 1142e28ce29aSPatrick Sanan Input Parameters: 1143d382aafbSBarry Smith + m1 - memory to free 1144d382aafbSBarry Smith . m2 - 2nd memory to free 1145d382aafbSBarry Smith . m3 - 3rd memory to free 1146d382aafbSBarry Smith - m4 - 4th memory to free 1147d382aafbSBarry Smith 1148d382aafbSBarry Smith Level: developer 1149d382aafbSBarry Smith 115095452b02SPatrick Sanan Notes: 115195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1152d382aafbSBarry Smith 1153d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1154d382aafbSBarry Smith 1155d382aafbSBarry Smith M*/ 1156ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1157d382aafbSBarry Smith 1158d382aafbSBarry Smith /*MC 1159d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1160d382aafbSBarry Smith 1161eca87e8dSBarry Smith Synopsis: 1162aaa7dc30SBarry Smith #include <petscsys.h> 1163eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1164eca87e8dSBarry Smith 1165eca87e8dSBarry Smith Not Collective 1166eca87e8dSBarry Smith 1167e28ce29aSPatrick Sanan Input Parameters: 1168d382aafbSBarry Smith + m1 - memory to free 1169d382aafbSBarry Smith . m2 - 2nd memory to free 1170d382aafbSBarry Smith . m3 - 3rd memory to free 1171d382aafbSBarry Smith . m4 - 4th memory to free 1172d382aafbSBarry Smith - m5 - 5th memory to free 1173d382aafbSBarry Smith 1174d382aafbSBarry Smith Level: developer 1175d382aafbSBarry Smith 117695452b02SPatrick Sanan Notes: 117795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1178d382aafbSBarry Smith 1179d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1180d382aafbSBarry Smith 1181d382aafbSBarry Smith M*/ 1182ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1183d382aafbSBarry Smith 1184d382aafbSBarry Smith /*MC 1185d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1186d382aafbSBarry Smith 1187eca87e8dSBarry Smith Synopsis: 1188aaa7dc30SBarry Smith #include <petscsys.h> 1189eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1190eca87e8dSBarry Smith 1191eca87e8dSBarry Smith Not Collective 1192eca87e8dSBarry Smith 1193e28ce29aSPatrick Sanan Input Parameters: 1194d382aafbSBarry Smith + m1 - memory to free 1195d382aafbSBarry Smith . m2 - 2nd memory to free 1196d382aafbSBarry Smith . m3 - 3rd memory to free 1197d382aafbSBarry Smith . m4 - 4th memory to free 1198d382aafbSBarry Smith . m5 - 5th memory to free 1199d382aafbSBarry Smith - m6 - 6th memory to free 1200d382aafbSBarry Smith 1201d382aafbSBarry Smith 1202d382aafbSBarry Smith Level: developer 1203d382aafbSBarry Smith 120495452b02SPatrick Sanan Notes: 120595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1206d382aafbSBarry Smith 1207d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1208d382aafbSBarry Smith 1209d382aafbSBarry Smith M*/ 1210ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1211d382aafbSBarry Smith 1212d382aafbSBarry Smith /*MC 1213d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1214d382aafbSBarry Smith 1215eca87e8dSBarry Smith Synopsis: 1216aaa7dc30SBarry Smith #include <petscsys.h> 1217eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1218eca87e8dSBarry Smith 1219eca87e8dSBarry Smith Not Collective 1220eca87e8dSBarry Smith 1221e28ce29aSPatrick Sanan Input Parameters: 1222d382aafbSBarry Smith + m1 - memory to free 1223d382aafbSBarry Smith . m2 - 2nd memory to free 1224d382aafbSBarry Smith . m3 - 3rd memory to free 1225d382aafbSBarry Smith . m4 - 4th memory to free 1226d382aafbSBarry Smith . m5 - 5th memory to free 1227d382aafbSBarry Smith . m6 - 6th memory to free 1228d382aafbSBarry Smith - m7 - 7th memory to free 1229d382aafbSBarry Smith 1230d382aafbSBarry Smith 1231d382aafbSBarry Smith Level: developer 1232d382aafbSBarry Smith 123395452b02SPatrick Sanan Notes: 123495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1237d382aafbSBarry Smith PetscMalloc7() 1238d382aafbSBarry Smith 1239d382aafbSBarry Smith M*/ 1240ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1241d382aafbSBarry Smith 1242ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1243ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1244071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1245efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12463221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1247ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 124892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1250d382aafbSBarry Smith 1251d382aafbSBarry Smith /* 1252c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1253c1706be6SHong Zhang */ 1254c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1255c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 125631f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 125731f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 125831f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 125931f06eaaSHong Zhang #endif 1260c1706be6SHong Zhang 1261a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 126236763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1263a5057860SBarry Smith 1264a5057860SBarry Smith /* 126566d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1266d382aafbSBarry Smith */ 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 126892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1271e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1272e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 127392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 127492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1275efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 127692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 127792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1278608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1279608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1280d382aafbSBarry Smith 12816a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 12858e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1286d382aafbSBarry Smith 1287d382aafbSBarry Smith /* 1288d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1289d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1290d382aafbSBarry Smith functionality and/or error checking. 1291d382aafbSBarry Smith */ 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1294d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1302a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13062f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13112c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 131447340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13156fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13166991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13176991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1319d382aafbSBarry Smith 1320573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1321573b0fb4SBarry Smith 1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1325d382aafbSBarry Smith 1326e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1327a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1328a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1329a53986e1SJed Brown 1330d382aafbSBarry Smith /* 1331d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1332d382aafbSBarry Smith */ 1333367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1334570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1335014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 13362414b3c7SJed Brown #else 13372414b3c7SJed Brown #define MPIU_SUM MPI_SUM 13382414b3c7SJed Brown #endif 1339570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1340014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1341014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1342d9822059SBarry Smith #else 1343d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1344d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1345d9822059SBarry Smith #endif 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1347d382aafbSBarry Smith 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1350eb3f98d2SBarry Smith 135195c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1352d6a4318aSJed Brown 1353639ff905SBarry Smith /* 1354639ff905SBarry Smith Defines PETSc error handling. 1355639ff905SBarry Smith */ 1356639ff905SBarry Smith #include <petscerror.h> 1357d382aafbSBarry Smith 13580700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1359014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1360014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 136281256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 136381256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 136481256985SMatthew G. Knepley 1365d382aafbSBarry Smith 1366d382aafbSBarry Smith /* 1367d382aafbSBarry Smith Routines that get memory usage information from the OS 1368d382aafbSBarry Smith */ 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1372b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1373d382aafbSBarry Smith 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1375d382aafbSBarry Smith 1376d382aafbSBarry Smith /* 1377d382aafbSBarry Smith Initialization of PETSc 1378d382aafbSBarry Smith */ 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1389d382aafbSBarry Smith 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1391607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1392d382aafbSBarry Smith 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1397d382aafbSBarry Smith 1398a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1399a50e088cSMatthew G. Knepley 1400a50e088cSMatthew G. Knepley 1401d382aafbSBarry Smith /* 1402d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14032981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1404d382aafbSBarry Smith */ 1405638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1406638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1407638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1408d382aafbSBarry Smith 1409d382aafbSBarry Smith /* 1410d382aafbSBarry Smith Functions that can act on any PETSc object. 1411d382aafbSBarry Smith */ 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1430bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1431bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14340eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14350eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1437d382aafbSBarry Smith 1438665c2dedSJed Brown #include <petscviewertypes.h> 1439639ff905SBarry Smith #include <petscoptions.h> 1440639ff905SBarry Smith 1441608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1442608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1443608c71bfSMatthew G. Knepley 14440633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14450633abcbSJed Brown 1446639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1447c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1448dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1449639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14500005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14510005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1459685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 14624099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1464b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1467d382aafbSBarry Smith 1468e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 14697aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1470e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1471e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1472e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1473e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1474e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1475e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1476e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1477e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1478e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 147915681b3cSBarry Smith 1480ec7429eaSBarry Smith #else 14817aab2a10SBarry Smith #define PetscSAWsBlock() 0 1482e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1483e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1484e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1485e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1486e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1487e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1488e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1489e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1490e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 149115681b3cSBarry Smith 1492ec7429eaSBarry Smith #endif 1493b90c6cbeSBarry Smith 149482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 149582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 149682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 14977d5d4d99SBarry Smith 14985fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1499a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15005fe58b6fSBarry Smith #endif 15017eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1502a64a8e02SBarry Smith 1503140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1504140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1505140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1506140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1507140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1508140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1509d382aafbSBarry Smith 1510d382aafbSBarry Smith /* 1511503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1512d382aafbSBarry Smith link libraries that will be loaded as needed. 1513d382aafbSBarry Smith */ 1514a240a19fSJed Brown 1515a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1516a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1517140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15181c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15191c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 152044ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1521140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1522140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1523140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1524d382aafbSBarry Smith 1525014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1533d382aafbSBarry Smith 1534d382aafbSBarry Smith /* 1535d382aafbSBarry Smith Useful utility routines 1536d382aafbSBarry Smith */ 1537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1539d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 15446ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 15456ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1546d382aafbSBarry Smith 154764ac3b0dSPatrick Sanan /*MC 1548ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1549503cfb0cSBarry Smith 1550e28ce29aSPatrick Sanan Notes: 1551e28ce29aSPatrick Sanan This is useful in cases like 1552503cfb0cSBarry Smith $ int *a; 1553ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 15541cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 155564ac3b0dSPatrick Sanan 155664ac3b0dSPatrick Sanan Level: beginner 155764ac3b0dSPatrick Sanan 155864ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 155964ac3b0dSPatrick Sanan M*/ 1560d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1561503cfb0cSBarry Smith 1562d382aafbSBarry Smith /*MC 1563d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1564d382aafbSBarry Smith 1565d382aafbSBarry Smith Synopsis: 1566aaa7dc30SBarry Smith #include <petscsys.h> 1567d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1568d382aafbSBarry Smith 1569eca87e8dSBarry Smith Not Collective 1570eca87e8dSBarry Smith 1571d382aafbSBarry Smith Input Parameters: 1572d382aafbSBarry Smith . format - the usual printf() format string 1573d382aafbSBarry Smith 1574d382aafbSBarry Smith Level: developer 1575d382aafbSBarry Smith 1576d382aafbSBarry Smith Fortran Note: 1577d382aafbSBarry Smith This routine is not supported in Fortran. 1578d382aafbSBarry Smith 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1581d382aafbSBarry Smith M*/ 1582014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1583d382aafbSBarry Smith 1584fcfd50ebSBarry Smith /* 1585fcfd50ebSBarry Smith Defines PETSc profiling. 1586fcfd50ebSBarry Smith */ 15872c8e378dSBarry Smith #include <petsclog.h> 1588fcfd50ebSBarry Smith 1589fcfd50ebSBarry Smith /* 1590fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1591fcfd50ebSBarry Smith */ 1592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 15991b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1600fcfd50ebSBarry Smith 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1604d382aafbSBarry Smith 1605d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1606d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1607d781fa04SBarry Smith 1608d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1610016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 161174ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1612d382aafbSBarry Smith #endif 1613d382aafbSBarry Smith 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 16160ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1621d382aafbSBarry Smith 1622014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1628b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1629d382aafbSBarry Smith 1630d382aafbSBarry Smith /* 1631d382aafbSBarry Smith For use in debuggers 1632d382aafbSBarry Smith */ 1633014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1634014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1638d382aafbSBarry Smith 1639a663daf8SBarry Smith #include <stddef.h> 1640a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1641d382aafbSBarry Smith #include <stdlib.h> 16426c7e564aSBarry Smith 16434a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1644d382aafbSBarry Smith #include <xmmintrin.h> 1645d382aafbSBarry Smith #endif 1646d382aafbSBarry Smith 1647d382aafbSBarry Smith /*@C 1648580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1649580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1650580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1651580bdb30SBarry Smith 1652580bdb30SBarry Smith Not Collective 1653580bdb30SBarry Smith 1654580bdb30SBarry Smith Input Parameters: 1655580bdb30SBarry Smith + b - pointer to initial memory space 1656580bdb30SBarry Smith . a - pointer to copy space 1657580bdb30SBarry Smith - n - length (in bytes) of space to copy 1658580bdb30SBarry Smith 1659580bdb30SBarry Smith Level: intermediate 1660580bdb30SBarry Smith 1661580bdb30SBarry Smith Note: 1662857a15f1SBarry Smith PetscArraymove() is preferred 1663580bdb30SBarry Smith This routine is analogous to memmove(). 1664580bdb30SBarry Smith 1665580bdb30SBarry Smith Developers Note: This is inlined for performance 1666580bdb30SBarry Smith 1667580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1668580bdb30SBarry Smith PetscArraymove() 1669580bdb30SBarry Smith @*/ 1670580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1671580bdb30SBarry Smith { 1672580bdb30SBarry Smith PetscFunctionBegin; 1673580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1674580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1675580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1676580bdb30SBarry Smith if (a < b) { 1677580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1678580bdb30SBarry Smith else { 1679580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1680580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1681580bdb30SBarry Smith } 1682580bdb30SBarry Smith } else { 1683580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1684580bdb30SBarry Smith else { 1685580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1686580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1687580bdb30SBarry Smith } 1688580bdb30SBarry Smith } 1689580bdb30SBarry Smith #else 1690580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1691580bdb30SBarry Smith #endif 1692580bdb30SBarry Smith PetscFunctionReturn(0); 1693580bdb30SBarry Smith } 1694580bdb30SBarry Smith 1695d382aafbSBarry Smith /*@C 1696d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1697d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1698d382aafbSBarry Smith PetscMemmove() in that case. 1699d382aafbSBarry Smith 1700d382aafbSBarry Smith Not Collective 1701d382aafbSBarry Smith 1702d382aafbSBarry Smith Input Parameters: 1703d382aafbSBarry Smith + b - pointer to initial memory space 1704d382aafbSBarry Smith - n - length (in bytes) of space to copy 1705d382aafbSBarry Smith 1706d382aafbSBarry Smith Output Parameter: 1707d382aafbSBarry Smith . a - pointer to copy space 1708d382aafbSBarry Smith 1709d382aafbSBarry Smith Level: intermediate 1710d382aafbSBarry Smith 1711d382aafbSBarry Smith Compile Option: 1712d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1713d382aafbSBarry Smith for memory copies on double precision values. 1714d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1715d382aafbSBarry Smith for memory copies on double precision values. 1716d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1717d382aafbSBarry Smith for memory copies on double precision values. 1718d382aafbSBarry Smith 1719d382aafbSBarry Smith Note: 1720580bdb30SBarry Smith Prefer PetscArraycpy() 1721d382aafbSBarry Smith This routine is analogous to memcpy(). 17221fd49c25SBarry Smith Not available from Fortran 17231fd49c25SBarry Smith 1724f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1725f5f57ec0SBarry Smith 1726580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1727d382aafbSBarry Smith 1728d382aafbSBarry Smith @*/ 17297087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1730d382aafbSBarry Smith { 1731d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1732c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1733c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1734a7e36092SMatthew G Knepley PetscFunctionBegin; 1735e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1736e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1737a7e36092SMatthew G Knepley #else 1738d382aafbSBarry Smith PetscFunctionBegin; 1739a7e36092SMatthew G Knepley #endif 1740a47a537aSLisandro Dalcin if (a != b && n > 0) { 1741d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1742e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1743d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1744d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1745d382aafbSBarry Smith #endif 1746d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1747c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1748d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1749d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1750c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1751c5df96a5SBarry Smith PetscErrorCode ierr; 1752c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 17538b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1754d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1755d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1756d382aafbSBarry Smith #else 1757d382aafbSBarry Smith size_t i; 1758d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1759d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1760d382aafbSBarry Smith #endif 1761d382aafbSBarry Smith } else { 1762d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1763d382aafbSBarry Smith } 1764d382aafbSBarry Smith #else 1765d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1766d382aafbSBarry Smith #endif 1767d382aafbSBarry Smith } 1768d382aafbSBarry Smith PetscFunctionReturn(0); 1769d382aafbSBarry Smith } 1770d382aafbSBarry Smith 1771d382aafbSBarry Smith /*@C 1772d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1773d382aafbSBarry Smith 1774d382aafbSBarry Smith Not Collective 1775d382aafbSBarry Smith 1776d382aafbSBarry Smith Input Parameters: 1777d382aafbSBarry Smith + a - pointer to beginning memory location 1778d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1779d382aafbSBarry Smith 1780d382aafbSBarry Smith Level: intermediate 1781d382aafbSBarry Smith 1782d382aafbSBarry Smith Compile Option: 1783d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1784d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1785d382aafbSBarry Smith 17861fd49c25SBarry Smith Not available from Fortran 1787857a15f1SBarry Smith Prefer PetscArrayzero() 17881fd49c25SBarry Smith 1789503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1790503cfb0cSBarry Smith 1791580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1792d382aafbSBarry Smith @*/ 17937087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1794d382aafbSBarry Smith { 1795d382aafbSBarry Smith if (n > 0) { 1796d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 179718703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1798d382aafbSBarry Smith #endif 1799d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1800d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1801d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1802d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1803d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1804d382aafbSBarry Smith } else { 1805d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1806d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1807d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1808d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1809d382aafbSBarry Smith } else { 1810d382aafbSBarry Smith #endif 1811d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1812d382aafbSBarry Smith bzero((char *)a,n); 1813d382aafbSBarry Smith #else 1814d382aafbSBarry Smith memset((char*)a,0,n); 1815d382aafbSBarry Smith #endif 1816d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1817d382aafbSBarry Smith } 1818d382aafbSBarry Smith #endif 1819d382aafbSBarry Smith } 1820d382aafbSBarry Smith return 0; 1821d382aafbSBarry Smith } 1822d382aafbSBarry Smith 1823d382aafbSBarry Smith /*MC 1824580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1825580bdb30SBarry Smith 1826580bdb30SBarry Smith Synopsis: 1827580bdb30SBarry Smith #include <petscsys.h> 1828580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1829580bdb30SBarry Smith 1830580bdb30SBarry Smith Not Collective 1831580bdb30SBarry Smith 1832580bdb30SBarry Smith Input Parameters: 1833580bdb30SBarry Smith + str1 - First array 1834580bdb30SBarry Smith . str2 - Second array 1835580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1836580bdb30SBarry Smith 1837580bdb30SBarry Smith Output Parameters: 1838580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1839580bdb30SBarry Smith 1840580bdb30SBarry Smith Level: intermediate 1841580bdb30SBarry Smith 1842580bdb30SBarry Smith Note: 1843857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1844580bdb30SBarry Smith The arrays must be of the same type 1845580bdb30SBarry Smith 1846580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1847580bdb30SBarry Smith PetscArraymove() 1848580bdb30SBarry Smith M*/ 18499e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1850580bdb30SBarry Smith 18518f8f2f0dSBarry Smith /*MC 1852580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1853580bdb30SBarry Smith do not overlap 1854580bdb30SBarry Smith 1855580bdb30SBarry Smith Synopsis: 1856580bdb30SBarry Smith #include <petscsys.h> 1857580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1858580bdb30SBarry Smith 1859580bdb30SBarry Smith Not Collective 1860580bdb30SBarry Smith 1861580bdb30SBarry Smith Input Parameters: 1862580bdb30SBarry Smith + str1 - First array 1863580bdb30SBarry Smith . str2 - Second array 1864580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1865580bdb30SBarry Smith 1866580bdb30SBarry Smith Level: intermediate 1867580bdb30SBarry Smith 1868580bdb30SBarry Smith Note: 1869857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1870580bdb30SBarry Smith The arrays must be of the same type 1871580bdb30SBarry Smith 1872580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1873580bdb30SBarry Smith M*/ 18749e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1875580bdb30SBarry Smith 18768f8f2f0dSBarry Smith /*MC 1877580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1878580bdb30SBarry Smith 1879580bdb30SBarry Smith Synopsis: 1880580bdb30SBarry Smith #include <petscsys.h> 1881580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1882580bdb30SBarry Smith 1883580bdb30SBarry Smith Not Collective 1884580bdb30SBarry Smith 1885580bdb30SBarry Smith Input Parameters: 1886de25709eSStefano Zampini + str1 - First array (destination) 1887de25709eSStefano Zampini . str2 - Second array (source) 1888580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1889580bdb30SBarry Smith 1890580bdb30SBarry Smith Level: intermediate 1891580bdb30SBarry Smith 1892580bdb30SBarry Smith Note: 1893857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1894580bdb30SBarry Smith The arrays must be of the same type 1895580bdb30SBarry Smith 1896580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1897580bdb30SBarry Smith M*/ 18989e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1899580bdb30SBarry Smith 19008f8f2f0dSBarry Smith /*MC 1901580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1902580bdb30SBarry Smith 1903580bdb30SBarry Smith Synopsis: 1904580bdb30SBarry Smith #include <petscsys.h> 1905580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1906580bdb30SBarry Smith 1907580bdb30SBarry Smith Not Collective 1908580bdb30SBarry Smith 1909580bdb30SBarry Smith Input Parameters: 1910580bdb30SBarry Smith + str1 - array 1911580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1912580bdb30SBarry Smith 1913580bdb30SBarry Smith Level: intermediate 1914580bdb30SBarry Smith 1915580bdb30SBarry Smith Note: 1916857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1917580bdb30SBarry Smith 1918580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1919580bdb30SBarry Smith M*/ 19209e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1921580bdb30SBarry Smith 1922d382aafbSBarry Smith /*MC 1923d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1924d382aafbSBarry Smith 1925eca87e8dSBarry Smith Synopsis: 1926aaa7dc30SBarry Smith #include <petscsys.h> 1927eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1928eca87e8dSBarry Smith 1929d382aafbSBarry Smith Not Collective 1930d382aafbSBarry Smith 1931d382aafbSBarry Smith Input Parameters: 1932d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1933d382aafbSBarry Smith . n - number of elements to fetch 1934d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 193550d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1936d382aafbSBarry Smith 1937d382aafbSBarry Smith Level: developer 1938d382aafbSBarry Smith 1939d382aafbSBarry Smith Notes: 1940d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1941d382aafbSBarry Smith 194250d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 194350d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 194450d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 194563cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 194663cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 194763cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1948d382aafbSBarry Smith 1949d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1950d382aafbSBarry Smith address). 1951d382aafbSBarry Smith 1952d382aafbSBarry Smith M*/ 1953d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1954d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1955d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1956d382aafbSBarry Smith } while (0) 1957d382aafbSBarry Smith 1958d382aafbSBarry Smith /* 1959d382aafbSBarry Smith Determine if some of the kernel computation routines use 1960d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1961d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1962d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1963e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1964d382aafbSBarry Smith */ 1965d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1966d382aafbSBarry Smith 1967d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1968d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1969d382aafbSBarry Smith #endif 1970d382aafbSBarry Smith 19715a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19725a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1973d382aafbSBarry Smith #endif 1974d382aafbSBarry Smith 1975d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1976d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1977d382aafbSBarry Smith #endif 1978d382aafbSBarry Smith 1979d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1980d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1981d382aafbSBarry Smith #endif 1982d382aafbSBarry Smith 1983d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1984d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1985d382aafbSBarry Smith #endif 1986d382aafbSBarry Smith 1987d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1988d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1989d382aafbSBarry Smith #endif 1990d382aafbSBarry Smith 1991d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1992d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1993d382aafbSBarry Smith #endif 1994d382aafbSBarry Smith 1995d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1996d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1997d382aafbSBarry Smith #endif 1998d382aafbSBarry Smith 1999d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2000d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2001d382aafbSBarry Smith #endif 2002d382aafbSBarry Smith 2003d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2004d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2005d382aafbSBarry Smith #endif 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2008d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2009d382aafbSBarry Smith #endif 2010d382aafbSBarry Smith 2011d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2012d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2013d382aafbSBarry Smith #endif 2014d382aafbSBarry Smith 2015d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2016d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2017d382aafbSBarry Smith #endif 2018d382aafbSBarry Smith 2019d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2020d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2021d382aafbSBarry Smith #endif 2022d382aafbSBarry Smith 2023d382aafbSBarry Smith #endif 2024d382aafbSBarry Smith 2025d382aafbSBarry Smith /* 2026d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2027d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2028d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2029d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2030d382aafbSBarry Smith ugly extern "C" {} wrappers. 2031d382aafbSBarry Smith */ 2032d382aafbSBarry Smith #if defined(__cplusplus) 2033d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2034d382aafbSBarry Smith # define EXTERN_C_END } 2035d382aafbSBarry Smith #else 2036d382aafbSBarry Smith # define EXTERN_C_BEGIN 2037d382aafbSBarry Smith # define EXTERN_C_END 2038d382aafbSBarry Smith #endif 2039d382aafbSBarry Smith 2040d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2041d382aafbSBarry Smith 2042d382aafbSBarry Smith /*MC 2043d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2044d382aafbSBarry Smith communication 2045d382aafbSBarry Smith 2046d382aafbSBarry Smith Level: beginner 2047d382aafbSBarry Smith 2048d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2049d382aafbSBarry Smith 2050d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2051d382aafbSBarry Smith M*/ 2052d382aafbSBarry Smith 2053d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2054014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2055014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2056c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2057c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2058c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2059c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2060d382aafbSBarry Smith #endif 2061d382aafbSBarry Smith 2062d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2063d382aafbSBarry Smith 2064d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2065d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2066d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2067d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2068d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2069d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2070d382aafbSBarry Smith 207161b0d812SBarry Smith /*@C 2072c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2073c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2074c73702f5SBarry Smith 2075c73702f5SBarry Smith Not Collective 2076c73702f5SBarry Smith 2077c73702f5SBarry Smith Input Parameter: 2078c73702f5SBarry Smith . a - the PetscInt64 value 2079c73702f5SBarry Smith 2080c73702f5SBarry Smith Output Parameter: 2081c73702f5SBarry Smith . b - the resulting PetscInt value 2082c73702f5SBarry Smith 2083c73702f5SBarry Smith Level: advanced 2084c73702f5SBarry Smith 2085c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2086c73702f5SBarry Smith 2087c73702f5SBarry Smith Not available from Fortran 2088c73702f5SBarry Smith 2089c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast() 2090c73702f5SBarry Smith @*/ 2091c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2092c73702f5SBarry Smith { 2093c73702f5SBarry Smith PetscFunctionBegin; 2094c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2095c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2096c73702f5SBarry Smith #endif 2097c73702f5SBarry Smith *b = (PetscInt)(a); 2098c73702f5SBarry Smith PetscFunctionReturn(0); 2099c73702f5SBarry Smith } 2100c73702f5SBarry Smith 2101c73702f5SBarry Smith /*@C 210261b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 210361b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 210461b0d812SBarry Smith 210561b0d812SBarry Smith Not Collective 210661b0d812SBarry Smith 210761b0d812SBarry Smith Input Parameter: 210861b0d812SBarry Smith . a - the PetscInt value 210961b0d812SBarry Smith 211061b0d812SBarry Smith Output Parameter: 211161b0d812SBarry Smith . b - the resulting PetscBLASInt value 211261b0d812SBarry Smith 211361b0d812SBarry Smith Level: advanced 211461b0d812SBarry Smith 2115*0bc7d38cSBarry Smith Notes: 21161fd49c25SBarry Smith Not available from Fortran 2117*0bc7d38cSBarry Smith Errors if the integer is negative since BLAS/LAPACK never take negative integer inputs 21181fd49c25SBarry Smith 2119c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 212061b0d812SBarry Smith @*/ 2121c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2122c5df96a5SBarry Smith { 2123c5df96a5SBarry Smith PetscFunctionBegin; 2124c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 212573f49a0bSSatish Balay *b = 0; 2126c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2127c5df96a5SBarry Smith #endif 2128*0bc7d38cSBarry Smith if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2129c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2130c5df96a5SBarry Smith PetscFunctionReturn(0); 2131c5df96a5SBarry Smith } 2132c5df96a5SBarry Smith 213361b0d812SBarry Smith /*@C 213461b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 213561b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 213661b0d812SBarry Smith 213761b0d812SBarry Smith Not Collective 213861b0d812SBarry Smith 213961b0d812SBarry Smith Input Parameter: 214061b0d812SBarry Smith . a - the PetscInt value 214161b0d812SBarry Smith 214261b0d812SBarry Smith Output Parameter: 214361b0d812SBarry Smith . b - the resulting PetscMPIInt value 214461b0d812SBarry Smith 214561b0d812SBarry Smith Level: advanced 214661b0d812SBarry Smith 21471fd49c25SBarry Smith Not available from Fortran 21481fd49c25SBarry Smith 2149c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 215061b0d812SBarry Smith @*/ 21514dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 21524dc2109aSBarry Smith { 21534dc2109aSBarry Smith PetscFunctionBegin; 21544dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 215573f49a0bSSatish Balay *b = 0; 21564dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 21574dc2109aSBarry Smith #endif 2158c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21594dc2109aSBarry Smith PetscFunctionReturn(0); 21604dc2109aSBarry Smith } 21614dc2109aSBarry Smith 2162bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 21632f18eb33SBarry Smith 21642f18eb33SBarry Smith /*@C 21652f18eb33SBarry Smith 21662f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 21672f18eb33SBarry Smith 21682f18eb33SBarry Smith Not Collective 21692f18eb33SBarry Smith 21702f18eb33SBarry Smith Input Parameter: 21712f18eb33SBarry Smith + a - the PetscReal value 21722f18eb33SBarry Smith - b - the second value 21732f18eb33SBarry Smith 2174390e1bf2SBarry Smith Returns: 2175390e1bf2SBarry Smith the result as a PetscInt value 21762f18eb33SBarry Smith 2177bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21782f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 21792f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21802f18eb33SBarry Smith 2181e28ce29aSPatrick Sanan Developers Note: 2182e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21832f18eb33SBarry Smith 21842f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21852f18eb33SBarry Smith 21861fd49c25SBarry Smith Not available from Fortran 21871fd49c25SBarry Smith 21882f18eb33SBarry Smith Level: advanced 21892f18eb33SBarry Smith 2190390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 21912f18eb33SBarry Smith @*/ 21922f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 21932f18eb33SBarry Smith { 2194bafee8b4SSatish Balay PetscInt64 r; 21952f18eb33SBarry Smith 2196bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 21972f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21982f18eb33SBarry Smith return (PetscInt) r; 21992f18eb33SBarry Smith } 22002f18eb33SBarry Smith 22012f18eb33SBarry Smith /*@C 22022f18eb33SBarry Smith 22032f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 22042f18eb33SBarry Smith 22052f18eb33SBarry Smith Not Collective 22062f18eb33SBarry Smith 22072f18eb33SBarry Smith Input Parameter: 22082f18eb33SBarry Smith + a - the PetscInt value 22092f18eb33SBarry Smith - b - the second value 22102f18eb33SBarry Smith 2211390e1bf2SBarry Smith Returns: 2212390e1bf2SBarry Smith the result as a PetscInt value 22132f18eb33SBarry Smith 2214bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22152f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 22162f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22172f18eb33SBarry Smith 22181fd49c25SBarry Smith Not available from Fortran 22191fd49c25SBarry Smith 22202f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22212f18eb33SBarry Smith 22222f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22232f18eb33SBarry Smith 22242f18eb33SBarry Smith Level: advanced 22252f18eb33SBarry Smith 2226390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 22272f18eb33SBarry Smith @*/ 22282f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 22292f18eb33SBarry Smith { 2230bafee8b4SSatish Balay PetscInt64 r; 22312f18eb33SBarry Smith 2232bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22332f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22342f18eb33SBarry Smith return (PetscInt) r; 22352f18eb33SBarry Smith } 22362f18eb33SBarry Smith 2237f91af8c7SBarry Smith /*@C 2238f91af8c7SBarry Smith 2239f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2240f91af8c7SBarry Smith 2241f91af8c7SBarry Smith Not Collective 2242f91af8c7SBarry Smith 2243f91af8c7SBarry Smith Input Parameter: 2244f91af8c7SBarry Smith + a - the PetscInt value 2245f91af8c7SBarry Smith - b - the second value 2246f91af8c7SBarry Smith 2247390e1bf2SBarry Smith Returns: 2248390e1bf2SBarry Smith the result as a PetscInt value 2249f91af8c7SBarry Smith 2250bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2251f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2252f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2253f91af8c7SBarry Smith 2254f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2255f91af8c7SBarry Smith 2256f5f57ec0SBarry Smith Not available from Fortran 2257f5f57ec0SBarry Smith 2258f91af8c7SBarry Smith Level: advanced 2259f91af8c7SBarry Smith 2260390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2261f91af8c7SBarry Smith @*/ 2262f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2263f91af8c7SBarry Smith { 2264bafee8b4SSatish Balay PetscInt64 r; 2265f91af8c7SBarry Smith 2266bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2267f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2268f91af8c7SBarry Smith return (PetscInt) r; 2269f91af8c7SBarry Smith } 2270f91af8c7SBarry Smith 22712f18eb33SBarry Smith /*@C 22722f18eb33SBarry Smith 22732f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 22742f18eb33SBarry Smith 22752f18eb33SBarry Smith Not Collective 22762f18eb33SBarry Smith 22772f18eb33SBarry Smith Input Parameter: 22782f18eb33SBarry Smith + a - the PetscInt value 22792f18eb33SBarry Smith - b - the second value 22802f18eb33SBarry Smith 22812f18eb33SBarry Smith Output Parameter:ma 2282390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 22832f18eb33SBarry Smith 2284bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 22852f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 22862f18eb33SBarry Smith 2287f5f57ec0SBarry Smith Not available from Fortran 2288f5f57ec0SBarry Smith 2289220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 22902f18eb33SBarry Smith 22912f18eb33SBarry Smith Level: advanced 22922f18eb33SBarry Smith 2293220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 22942f18eb33SBarry Smith @*/ 22952f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 22962f18eb33SBarry Smith { 2297bafee8b4SSatish Balay PetscInt64 r; 22982f18eb33SBarry Smith 22992f18eb33SBarry Smith PetscFunctionBegin; 2300bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23012f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 23022f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 23032f18eb33SBarry Smith #endif 2304f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2305f91af8c7SBarry Smith PetscFunctionReturn(0); 2306f91af8c7SBarry Smith } 2307f91af8c7SBarry Smith 2308f91af8c7SBarry Smith /*@C 2309f91af8c7SBarry Smith 2310fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2311f91af8c7SBarry Smith 2312f91af8c7SBarry Smith Not Collective 2313f91af8c7SBarry Smith 2314f91af8c7SBarry Smith Input Parameter: 2315f91af8c7SBarry Smith + a - the PetscInt value 2316f91af8c7SBarry Smith - b - the second value 2317f91af8c7SBarry Smith 2318f91af8c7SBarry Smith Output Parameter:ma 2319390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2320f91af8c7SBarry Smith 2321bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2322f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2323f91af8c7SBarry Smith 2324f5f57ec0SBarry Smith Not available from Fortran 2325f5f57ec0SBarry Smith 2326f91af8c7SBarry Smith Level: advanced 2327f91af8c7SBarry Smith 2328390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2329f91af8c7SBarry Smith @*/ 2330f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2331f91af8c7SBarry Smith { 2332bafee8b4SSatish Balay PetscInt64 r; 2333f91af8c7SBarry Smith 2334f91af8c7SBarry Smith PetscFunctionBegin; 2335bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2336f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2337f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2338f91af8c7SBarry Smith #endif 2339f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 23402f18eb33SBarry Smith PetscFunctionReturn(0); 23412f18eb33SBarry Smith } 2342c5df96a5SBarry Smith 2343d382aafbSBarry Smith /* 23442981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2345d382aafbSBarry Smith */ 2346d382aafbSBarry Smith #if defined(hz) 2347d382aafbSBarry Smith # undef hz 2348d382aafbSBarry Smith #endif 2349d382aafbSBarry Smith 235015a5570dSLisandro Dalcin #include <limits.h> 235115a5570dSLisandro Dalcin 235215a5570dSLisandro Dalcin /* The number of bits in a byte */ 235315a5570dSLisandro Dalcin 235415a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 235515a5570dSLisandro Dalcin 2356d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2357d382aafbSBarry Smith # include <sys/types.h> 2358d382aafbSBarry Smith #endif 2359d382aafbSBarry Smith 2360d382aafbSBarry Smith /*MC 2361d382aafbSBarry Smith 236266d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 236366d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 236466d79e26SBarry Smith 236566d79e26SBarry Smith 236666d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 236766d79e26SBarry Smith 236866d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 236966d79e26SBarry Smith 237066d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 237166d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 237266d79e26SBarry Smith 237366d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 237466d79e26SBarry Smith 237566d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 237666d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 237766d79e26SBarry Smith version number (x.y.z). 237866d79e26SBarry Smith 237966d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 238066d79e26SBarry Smith 238166d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 238266d79e26SBarry Smith 238366d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 238466d79e26SBarry Smith 238566d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 238666d79e26SBarry Smith 238766d79e26SBarry Smith Level: intermediate 238866d79e26SBarry Smith 238966d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 239066d79e26SBarry Smith 239166d79e26SBarry Smith M*/ 239266d79e26SBarry Smith 239366d79e26SBarry Smith /*MC 239466d79e26SBarry Smith 23951b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 23961b266c99SBarry Smith of every function and module definition you need something like 2397d382aafbSBarry Smith 2398d382aafbSBarry Smith $ 2399af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 24000f665fc7SPatrick Sanan $ use petscXXX 24011b266c99SBarry Smith 2402692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 24031b266c99SBarry Smith 2404d382aafbSBarry Smith $ XXX variablename 24051b266c99SBarry Smith $ type(tXXX) variablename 24061b266c99SBarry Smith 2407692afcd8SPatrick Sanan For example, 24081b266c99SBarry Smith 2409bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 24101b266c99SBarry Smith $ use petscvec 2411d382aafbSBarry Smith $ 2412692afcd8SPatrick Sanan $ Vec b 2413692afcd8SPatrick Sanan $ type(tVec) x 2414d382aafbSBarry Smith 2415d382aafbSBarry Smith Level: beginner 2416d382aafbSBarry Smith 2417d382aafbSBarry Smith M*/ 2418d382aafbSBarry Smith 2419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 242527710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24265f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2427d382aafbSBarry Smith 24286a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24296a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24306a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2432ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 243322ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2435f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 243660e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2437d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 24416c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 244217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 244317d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 24455569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 244717df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 244939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2451745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 245239f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 24566c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 24576c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2458e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2459ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2460ce605777SToby Isaac 2461676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*)); 2462676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2463676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2464676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 2465676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*)); 2466676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2467676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2468676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2469676f2a66SJacob Faibussowitsch 2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2472d382aafbSBarry Smith 247376bdecfbSBarry Smith /*J 2474d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2475d382aafbSBarry Smith 2476d382aafbSBarry Smith Level: beginner 2477d382aafbSBarry Smith 2478e28ce29aSPatrick Sanan Notes: 2479e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 248025ccb61fSToby Isaac with the option --download-sprng or --download-random123 2481d382aafbSBarry Smith 24828f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 248376bdecfbSBarry Smith J*/ 248419fd82e9SBarry Smith typedef const char* PetscRandomType; 2485d382aafbSBarry Smith #define PETSCRAND "rand" 2486d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2487d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2488c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 248925ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2490d382aafbSBarry Smith 2491d382aafbSBarry Smith /* Logging support */ 2492014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2493d382aafbSBarry Smith 2494607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2495d382aafbSBarry Smith 2496d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2497140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2498d382aafbSBarry Smith 2499bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 250019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 250219fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2503fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2505d382aafbSBarry Smith 2506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2515d382aafbSBarry Smith 2516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 252397540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 25248a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 252597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2526d382aafbSBarry Smith 252730815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 252830815ce0SLisandro Dalcin 25299860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 25309860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2531f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2532f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2540c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2541e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2542c891a504SStefano Zampini #endif 2543d382aafbSBarry Smith 2544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2546014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2547d382aafbSBarry Smith 2548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 25542a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2555d382aafbSBarry Smith 2556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2561cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2562cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2563d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2564d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2565d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2566d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 25676afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 25686afbe7ddSJed Brown MPI_Request**,MPI_Request**, 25696afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 25706afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 25716afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2572d382aafbSBarry Smith 25736145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 25746145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 25756145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 25766145cd65SJed Brown 2577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2578d382aafbSBarry Smith 2579ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2580ce94432eSBarry Smith 258145487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 258245487dadSJed Brown 2583d382aafbSBarry Smith struct _n_PetscSubcomm { 2584d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2585d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2586306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 258745487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 258845487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2589708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 259045487dadSJed Brown PetscSubcommType type; 2591e5acf8a4SHong Zhang char *subcommprefix; 2592d382aafbSBarry Smith }; 2593d382aafbSBarry Smith 2594c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2595306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 259636be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 260165d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2602053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2603f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2604e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2605a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2606a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2607a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2608d382aafbSBarry Smith 26099962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 26109962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 26119962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 26129962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 26139962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 26149962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 26159962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 26169962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 26179962606eSBarry Smith 26185e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 26195f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 26205f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26215f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26225f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 26235e71baefSBarry Smith 2624a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2625a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2626a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2627a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2628a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2629a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2630a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2631a32e93adSJunchao Zhang 263213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 26330f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 263413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2635137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2636137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2637137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 263813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 263913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 26400f453b92SJed Brown 26415e71baefSBarry Smith 2642471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2643471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2644471ecdacSJed Brown * possible. */ 26456a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2646d382aafbSBarry Smith 26479de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 26489de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 26499de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 26509de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 26519de0f6ecSBarry Smith 2652ace2fbaeSBarry Smith #include <stdarg.h> 2653ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2654ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2655ace2fbaeSBarry Smith 2656268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2657fbfcfee5SBarry Smith 26581f817a21SBarry Smith /*@C 26591f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26601f817a21SBarry Smith 26611f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 26621f817a21SBarry Smith 26631f817a21SBarry Smith Input Parameters: 26641f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 26651f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 26661f817a21SBarry Smith 2667850545d0SSatish Balay Level: intermediate 2668850545d0SSatish Balay 2669f5f57ec0SBarry Smith Not available from Fortran 2670f5f57ec0SBarry Smith 26711f817a21SBarry Smith Options Database: 2672063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 26731f817a21SBarry Smith @*/ 2674dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2675dff31646SBarry Smith { 2676dff31646SBarry Smith size_t len; 2677dff31646SBarry Smith char *vstring; 2678dff31646SBarry Smith PetscErrorCode ierr; 2679dff31646SBarry Smith 26801f817a21SBarry Smith PetscFunctionBegin; 26818d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2682dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 268335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2684580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2685dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26861f817a21SBarry Smith PetscFunctionReturn(0); 2687dff31646SBarry Smith } 2688dff31646SBarry Smith 2689b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2690fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2691fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2692f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2693fe278a28SBarry Smith 2694f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2695f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2696b967cddfSBarry Smith 26979f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 26989f4d3c52SBarry Smith 269904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2700763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2701dff31646SBarry Smith 270268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27035dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2704d382aafbSBarry Smith 2705b2566f29SBarry Smith 2706b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2707b2566f29SBarry Smith /* 2708b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2709b2566f29SBarry Smith */ 27108f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 271177a5e07dSBarry Smith 271277a5e07dSBarry Smith /*MC 271377a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 271477a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 271577a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 271677a5e07dSBarry Smith 2717d083f849SBarry Smith Collective 271877a5e07dSBarry Smith 271977a5e07dSBarry Smith Synopsis: 272077a5e07dSBarry Smith #include <petscsys.h> 272177a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 272277a5e07dSBarry Smith 272377a5e07dSBarry Smith Input Parameters: 272477a5e07dSBarry Smith + indata - pointer to the input data to be reduced 272577a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 272677a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 272777a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 272877a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 272977a5e07dSBarry Smith 273077a5e07dSBarry Smith Output Parameter: 273177a5e07dSBarry Smith . outdata - the reduced values 273277a5e07dSBarry Smith 2733e28ce29aSPatrick Sanan Notes: 2734e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 273577a5e07dSBarry Smith 273677a5e07dSBarry Smith Level: developer 273777a5e07dSBarry Smith 273877a5e07dSBarry Smith .seealso: MPI_Allreduce() 273977a5e07dSBarry Smith M*/ 2740fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2741b2566f29SBarry Smith #else 2742b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2743b2566f29SBarry Smith #endif 2744b2566f29SBarry Smith 2745b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 27468198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 27478198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 27482f065d89SBarry Smith #endif 27498198064fSBarry Smith 275012801b39SBarry Smith /* 275112801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 275212801b39SBarry Smith */ 27538ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 27548ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 275512801b39SBarry Smith 2756d382aafbSBarry Smith #endif 2757