1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 447d993e7Ssuyashtn Portions of this code are under: 547d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 6d382aafbSBarry Smith */ 7a4963045SJacob Faibussowitsch #pragma once 83ca90d2dSJacob Faibussowitsch 9d382aafbSBarry Smith /* ========================================================================== */ 10d382aafbSBarry Smith /* 11d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 121c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 131c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 141c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 151cc8b206SBarry Smith directory as the other PETSc include files. 16d382aafbSBarry Smith */ 172c8e378dSBarry Smith #include <petscconf.h> 18100ffedbSJunchao Zhang #include <petscpkg_version.h> 191c77a0c5SBarry Smith #include <petscconf_poison.h> 202c8e378dSBarry Smith #include <petscfix.h> 21bde483f2SJacob Faibussowitsch #include <petscmacros.h> 2233bb201bSJacob Faibussowitsch 23ac09b921SBarry Smith /* SUBMANSEC = Sys */ 24ac09b921SBarry Smith 2573fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2673fca5a0SBarry Smith /* 2773fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2873fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2973fca5a0SBarry Smith */ 30216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 3173fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 3273fca5a0SBarry Smith #endif 33216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3473fca5a0SBarry Smith #define _BSD_SOURCE 3573fca5a0SBarry Smith #endif 3607f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3707f00807SSatish Balay #define _DEFAULT_SOURCE 3807f00807SSatish Balay #endif 39ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 40ea0fecefSShri Abhyankar #define _GNU_SOURCE 41ea0fecefSShri Abhyankar #endif 4273fca5a0SBarry Smith #endif 4373fca5a0SBarry Smith 44df4397b0SStefano Zampini #include <petscsystypes.h> 45df4397b0SStefano Zampini 46d382aafbSBarry Smith /* ========================================================================== */ 47d382aafbSBarry Smith 48d382aafbSBarry Smith /* 49d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 50d382aafbSBarry Smith 51d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 52d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 53d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 54d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 55d382aafbSBarry Smith mpicxx.h directly in their code 56d382aafbSBarry Smith */ 57fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 58d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 59fa9e63e2SJed Brown #endif 60fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 61d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 62fa9e63e2SJed Brown #endif 63e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 64e771154cSJed Brown #include <petsc/mpiuni/mpi.h> 65e771154cSJed Brown #else 662c8e378dSBarry Smith #include <mpi.h> 67e771154cSJed Brown #endif 6865013866SBarry Smith 69d382aafbSBarry Smith /* 70a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 71a7886beaSBarry Smith This usually happens because 72a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 73a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 74a7886beaSBarry Smith */ 75a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 766524c165SJacob Faibussowitsch #ifndef MPIUNI_H 77a7886beaSBarry Smith #error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 78a7886beaSBarry Smith #endif 79*0f85934cSJunchao Zhang #elif defined(PETSC_HAVE_I_MPI) 8041f4af4cSSatish Balay #if !defined(I_MPI_NUMVERSION) 8141f4af4cSSatish Balay #error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 82*0f85934cSJunchao Zhang #elif I_MPI_NUMVERSION != PETSC_PKG_I_MPI_NUMVERSION 8341f4af4cSSatish Balay #error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 8441f4af4cSSatish Balay #endif 85*0f85934cSJunchao Zhang #elif defined(PETSC_HAVE_MVAPICH2) 8641f4af4cSSatish Balay #if !defined(MVAPICH2_NUMVERSION) 8741f4af4cSSatish Balay #error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 88*0f85934cSJunchao Zhang #elif MVAPICH2_NUMVERSION != PETSC_PKG_MVAPICH2_NUMVERSION 8941f4af4cSSatish Balay #error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 9041f4af4cSSatish Balay #endif 91e3c15826SJunchao Zhang #elif defined(PETSC_HAVE_MPICH) 9241f4af4cSSatish Balay #if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 93a7886beaSBarry Smith #error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 94e3c15826SJunchao Zhang #elif !PETSC_PKG_MPICH_VERSION_EQ(MPICH_NUMVERSION / 10000000, MPICH_NUMVERSION / 100000 % 100, MPICH_NUMVERSION / 1000 % 100) 95a7886beaSBarry Smith #error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 96a7886beaSBarry Smith #endif 97100ffedbSJunchao Zhang #elif defined(PETSC_HAVE_OPENMPI) 98a7886beaSBarry Smith #if !defined(OMPI_MAJOR_VERSION) 99a7886beaSBarry Smith #error "PETSc was configured with Open MPI but now appears to be compiling using a non-Open MPI mpi.h" 100100ffedbSJunchao Zhang #elif !PETSC_PKG_OPENMPI_VERSION_EQ(OMPI_MAJOR_VERSION, OMPI_MINOR_VERSION, OMPI_RELEASE_VERSION) 101c3ac57cfSSatish Balay #error "PETSc was configured with one Open MPI mpi.h version but now appears to be compiling using a different Open MPI mpi.h version" 102a7886beaSBarry Smith #endif 103d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 104d97fd468SStefano Zampini #if !defined(MSMPI_VER) 105d97fd468SStefano Zampini #error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 106d97fd468SStefano Zampini #elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 107d97fd468SStefano Zampini #error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 108d97fd468SStefano Zampini #endif 109d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 110d97fd468SStefano Zampini #error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of Open MPI, MS-MPI or a MPICH variant" 111a7886beaSBarry Smith #endif 112a7886beaSBarry Smith 113a7886beaSBarry Smith /* 1142981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 115d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 116d382aafbSBarry Smith */ 117d382aafbSBarry Smith #include <stdio.h> 118d382aafbSBarry Smith 1197de69702SBarry Smith /* MSMPI on 32-bit Microsoft Windows requires this yukky hack - that breaks MPI standard compliance */ 120d382aafbSBarry Smith #if !defined(MPIAPI) 121d382aafbSBarry Smith #define MPIAPI 122d382aafbSBarry Smith #endif 123d382aafbSBarry Smith 12493d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_ENUM PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscEnum); 12593d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_BOOL PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscBool); 126e28ce29aSPatrick Sanan 127e28ce29aSPatrick Sanan /*MC 12887497f52SBarry Smith MPIU_INT - Portable MPI datatype corresponding to `PetscInt` independent of the precision of `PetscInt` 129e28ce29aSPatrick Sanan 130667f096bSBarry Smith Level: beginner 131667f096bSBarry Smith 13238b83642SBarry Smith Note: 13387497f52SBarry Smith In MPI calls that require an MPI datatype that matches a `PetscInt` or array of `PetscInt` values, pass this value. 134e28ce29aSPatrick Sanan 13538b83642SBarry Smith .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_COUNT`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 136e28ce29aSPatrick Sanan M*/ 137e28ce29aSPatrick Sanan 1387cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 139b7b8f77aSBarry Smith 140d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 141bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64 142d382aafbSBarry Smith #else 143d382aafbSBarry Smith #define MPIU_INT MPI_INT 144d382aafbSBarry Smith #endif 145d382aafbSBarry Smith 14638b83642SBarry Smith /*MC 14738b83642SBarry Smith MPIU_COUNT - Portable MPI datatype corresponding to `PetscCount` independent of the precision of `PetscCount` 14838b83642SBarry Smith 14938b83642SBarry Smith Level: beginner 15038b83642SBarry Smith 15138b83642SBarry Smith Note: 15238b83642SBarry Smith In MPI calls that require an MPI datatype that matches a `PetscCount` or array of `PetscCount` values, pass this value. 15338b83642SBarry Smith 15438b83642SBarry Smith Developer Note: 15595bd0b28SBarry Smith It seems `MPI_AINT` is unsigned so this may be the wrong choice here since `PetscCount` is signed 15638b83642SBarry Smith 15738b83642SBarry Smith .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_INT`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 15838b83642SBarry Smith M*/ 15938b83642SBarry Smith #define MPIU_COUNT MPI_AINT 16038b83642SBarry Smith 161503cfb0cSBarry Smith /* 162503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 163503cfb0cSBarry Smith */ 16493d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_SIZE_T PETSC_ATTRIBUTE_MPI_TYPE_TAG(size_t); 165d382aafbSBarry Smith 166d382aafbSBarry Smith /* 167d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 168d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 169d382aafbSBarry Smith */ 170014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDOUT; 171d382aafbSBarry Smith 172d382aafbSBarry Smith /* 173d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 174d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 175d382aafbSBarry Smith */ 176014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDERR; 177d382aafbSBarry Smith 178d382aafbSBarry Smith /* 179dc07da0dSStefano Zampini Handle inclusion when using clang compiler with CUDA support 180dc07da0dSStefano Zampini __float128 is not available for the device 181dc07da0dSStefano Zampini */ 182dc07da0dSStefano Zampini #if defined(__clang__) && defined(__CUDA_ARCH__) 183dc07da0dSStefano Zampini #define PETSC_SKIP_REAL___FLOAT128 184dc07da0dSStefano Zampini #endif 185dc07da0dSStefano Zampini 186dc07da0dSStefano Zampini /* 187d382aafbSBarry Smith Declare extern C stuff after including external header files 188d382aafbSBarry Smith */ 189d382aafbSBarry Smith 1906edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 1918b49ba18SBarry Smith /* 192390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 1938b49ba18SBarry Smith */ 1948b49ba18SBarry Smith #include <petscmath.h> 1958b49ba18SBarry Smith 196d382aafbSBarry Smith /*MC 197667f096bSBarry Smith PETSC_IGNORE - same as `NULL`, means PETSc will ignore this argument 198d382aafbSBarry Smith 199d382aafbSBarry Smith Level: beginner 200d382aafbSBarry Smith 201e28ce29aSPatrick Sanan Note: 202667f096bSBarry Smith Accepted by many PETSc functions to not set a parameter and instead use a default value 203d382aafbSBarry Smith 20487497f52SBarry Smith Fortran Note: 205667f096bSBarry Smith Use `PETSC_NULL_INTEGER`, `PETSC_NULL_DOUBLE_PRECISION` etc 206d382aafbSBarry Smith 207db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_DETERMINE` 208d382aafbSBarry Smith M*/ 209f3fa974cSJacob Faibussowitsch #define PETSC_IGNORE PETSC_NULLPTR 210edd03b47SJacob Faibussowitsch #define PETSC_NULL PETSC_DEPRECATED_MACRO(3, 19, 0, "PETSC_NULLPTR", ) PETSC_NULLPTR 211c528d872SBarry Smith 212d382aafbSBarry Smith /*MC 213557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 214557d4da8SBarry Smith where you wish PETSc to use the default. 215557d4da8SBarry Smith 216557d4da8SBarry Smith Level: beginner 217557d4da8SBarry Smith 218db781477SPatrick Sanan .seealso: `PETSC_DEFAULT`, `PETSC_IGNORE`, `PETSC_DETERMINE` 219557d4da8SBarry Smith M*/ 220557d4da8SBarry Smith 221557d4da8SBarry Smith /*MC 222af27ebaaSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter where you wish PETSc to compute the required value. 223d382aafbSBarry Smith 224d382aafbSBarry Smith Level: beginner 225d382aafbSBarry Smith 226e28ce29aSPatrick Sanan Developer Note: 22787497f52SBarry Smith I would like to use const `PetscInt` `PETSC_DETERMINE` = `PETSC_DECIDE`; but for 22887497f52SBarry Smith some reason this is not allowed by the standard even though `PETSC_DECIDE` is a constant value. 229557d4da8SBarry Smith 230db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_IGNORE`, `VecSetSizes()` 231d382aafbSBarry Smith M*/ 232d382aafbSBarry Smith 233d382aafbSBarry Smith /*MC 234af27ebaaSBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter where you wish PETSc to use the default. 235557d4da8SBarry Smith 236557d4da8SBarry Smith Level: beginner 237557d4da8SBarry Smith 23887497f52SBarry Smith Fortran Note: 23987497f52SBarry Smith You need to use `PETSC_DEFAULT_INTEGER` or `PETSC_DEFAULT_REAL`. 240557d4da8SBarry Smith 241db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_IGNORE`, `PETSC_DETERMINE` 242557d4da8SBarry Smith M*/ 24305c2f48cSJacob Faibussowitsch 24405c2f48cSJacob Faibussowitsch /* These MUST be preprocessor defines! see https://gitlab.com/petsc/petsc/-/issues/1370 */ 24505c2f48cSJacob Faibussowitsch #define PETSC_DECIDE (-1) 24605c2f48cSJacob Faibussowitsch #define PETSC_DETERMINE PETSC_DECIDE 24705c2f48cSJacob Faibussowitsch #define PETSC_DEFAULT (-2) 248557d4da8SBarry Smith 249557d4da8SBarry Smith /*MC 250af27ebaaSBarry Smith PETSC_COMM_WORLD - the equivalent of the `MPI_COMM_WORLD` communicator which represents all the processes that PETSc knows about. 251d382aafbSBarry Smith 252d382aafbSBarry Smith Level: beginner 253d382aafbSBarry Smith 254e28ce29aSPatrick Sanan Notes: 25587497f52SBarry Smith By default `PETSC_COMM_WORLD` and `MPI_COMM_WORLD` are identical unless you wish to 25687497f52SBarry Smith run PETSc on ONLY a subset of `MPI_COMM_WORLD`. In that case create your new (smaller) 25787497f52SBarry Smith communicator, call it, say comm, and set `PETSC_COMM_WORLD` = comm BEFORE calling 258af27ebaaSBarry Smith `PetscInitialize()`, but after `MPI_Init()` has been called. 259a990b902SBarry Smith 260af27ebaaSBarry Smith The value of `PETSC_COMM_WORLD` should never be used or accessed before `PetscInitialize()` 261a990b902SBarry Smith is called because it may not have a valid value yet. 262d382aafbSBarry Smith 263db781477SPatrick Sanan .seealso: `PETSC_COMM_SELF` 264d382aafbSBarry Smith M*/ 265014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 266d382aafbSBarry Smith 267d382aafbSBarry Smith /*MC 26887497f52SBarry Smith PETSC_COMM_SELF - This is always `MPI_COMM_SELF` 269d382aafbSBarry Smith 270d382aafbSBarry Smith Level: beginner 271d382aafbSBarry Smith 27295bd0b28SBarry Smith Note: 27316a05f60SBarry Smith Do not USE/access or set this variable before `PetscInitialize()` has been called. 274a990b902SBarry Smith 275db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD` 276d382aafbSBarry Smith M*/ 277d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 278d382aafbSBarry Smith 2796de5d289SStefano Zampini /*MC 280af27ebaaSBarry Smith PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes MPI with `MPI_Init_thread()`. 2816de5d289SStefano Zampini 282d598313aSBarry Smith No Fortran Support 283d598313aSBarry Smith 2846de5d289SStefano Zampini Level: beginner 2856de5d289SStefano Zampini 28695bd0b28SBarry Smith Note: 287d598313aSBarry Smith By default `PETSC_MPI_THREAD_REQUIRED` equals `MPI_THREAD_FUNNELED` when the MPI implementation provides `MPI_Init_thread()`, otherwise it equals `MPI_THREAD_SINGLE` 2886de5d289SStefano Zampini 289db781477SPatrick Sanan .seealso: `PetscInitialize()` 2906de5d289SStefano Zampini M*/ 2916de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 2926de5d289SStefano Zampini 293d598313aSBarry Smith /*MC 294d598313aSBarry Smith PetscBeganMPI - indicates if PETSc initialized MPI during `PetscInitialize()` or if MPI was already initialized. 295d598313aSBarry Smith 296d598313aSBarry Smith Synopsis: 297d598313aSBarry Smith #include <petscsys.h> 298d598313aSBarry Smith PetscBool PetscBeganMPI; 299d598313aSBarry Smith 300d598313aSBarry Smith No Fortran Support 301d598313aSBarry Smith 302d598313aSBarry Smith Level: developer 303d598313aSBarry Smith 304d598313aSBarry Smith .seealso: `PetscInitialize()`, `PetscInitializeCalled()` 305d598313aSBarry Smith M*/ 306d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 307d598313aSBarry Smith 3088ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 309014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 310014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 3114cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 312d382aafbSBarry Smith 313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm), PetscErrorCode (*)(MPI_Comm)); 314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm, MPI_Comm *, int *); 315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm *); 31657f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm, MPI_Comm *); 31757f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm, MPI_Comm *); 318d382aafbSBarry Smith 31959e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 32059e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 32159e55d94SJunchao Zhang #endif 32259e55d94SJunchao Zhang 32371438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 32471438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 32571438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 32671438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 32771438e86SJunchao Zhang #endif 32871438e86SJunchao Zhang 329540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 330540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 331540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool *); 332540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 333540e20f2SPierre Jolivet #endif 334540e20f2SPierre Jolivet 335d382aafbSBarry Smith /*MC 33687497f52SBarry Smith PetscMalloc - Allocates memory, One should use `PetscNew()`, `PetscMalloc1()` or `PetscCalloc1()` usually instead of this 337d382aafbSBarry Smith 338eca87e8dSBarry Smith Synopsis: 339aaa7dc30SBarry Smith #include <petscsys.h> 340eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 341eca87e8dSBarry Smith 342eca87e8dSBarry Smith Not Collective 343eca87e8dSBarry Smith 344d382aafbSBarry Smith Input Parameter: 345d382aafbSBarry Smith . m - number of bytes to allocate 346d382aafbSBarry Smith 347d382aafbSBarry Smith Output Parameter: 348d382aafbSBarry Smith . result - memory allocated 349d382aafbSBarry Smith 350d382aafbSBarry Smith Level: beginner 351d382aafbSBarry Smith 35249d7da52SJed Brown Notes: 35349d7da52SJed Brown Memory is always allocated at least double aligned 354d382aafbSBarry Smith 35516a05f60SBarry Smith It is safe to allocate size 0 and pass the resulting pointer (which may or may not be `NULL`) to `PetscFree()`. 356d382aafbSBarry Smith 357db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 358d382aafbSBarry Smith M*/ 359071fcb05SBarry Smith #define PetscMalloc(a, b) ((*PetscTrMalloc)((a), PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 360d382aafbSBarry Smith 361d382aafbSBarry Smith /*MC 362d5b43468SJose E. Roman PetscRealloc - Reallocates memory 3633221ece2SMatthew G. Knepley 3643221ece2SMatthew G. Knepley Synopsis: 3653221ece2SMatthew G. Knepley #include <petscsys.h> 3663221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 3673221ece2SMatthew G. Knepley 3683221ece2SMatthew G. Knepley Not Collective 3693221ece2SMatthew G. Knepley 3703221ece2SMatthew G. Knepley Input Parameters: 3713221ece2SMatthew G. Knepley + m - number of bytes to allocate 37292f119d6SBarry Smith - result - previous memory 3733221ece2SMatthew G. Knepley 3743221ece2SMatthew G. Knepley Output Parameter: 3753221ece2SMatthew G. Knepley . result - new memory allocated 3763221ece2SMatthew G. Knepley 3773221ece2SMatthew G. Knepley Level: developer 3783221ece2SMatthew G. Knepley 37995bd0b28SBarry Smith Note: 3803221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 3813221ece2SMatthew G. Knepley 382db781477SPatrick Sanan .seealso: `PetscMalloc()`, `PetscFree()`, `PetscNew()` 3833221ece2SMatthew G. Knepley M*/ 3843221ece2SMatthew G. Knepley #define PetscRealloc(a, b) ((*PetscTrRealloc)((a), __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 3853221ece2SMatthew G. Knepley 3863221ece2SMatthew G. Knepley /*MC 38787497f52SBarry Smith PetscAddrAlign - Rounds up an address to `PETSC_MEMALIGN` alignment 388d382aafbSBarry Smith 389d382aafbSBarry Smith Synopsis: 390aaa7dc30SBarry Smith #include <petscsys.h> 391d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 392d382aafbSBarry Smith 393eca87e8dSBarry Smith Not Collective 394eca87e8dSBarry Smith 3952fe279fdSBarry Smith Input Parameter: 396eca87e8dSBarry Smith . addr - address to align (any pointer type) 397eca87e8dSBarry Smith 398d382aafbSBarry Smith Level: developer 399d382aafbSBarry Smith 400db781477SPatrick Sanan .seealso: `PetscMallocAlign()` 401d382aafbSBarry Smith M*/ 402f3fa974cSJacob Faibussowitsch #define PetscAddrAlign(a) ((void *)((((PETSC_UINTPTR_T)(a)) + (PETSC_MEMALIGN - 1)) & ~(PETSC_MEMALIGN - 1))) 403d382aafbSBarry Smith 404d382aafbSBarry Smith /*MC 40587497f52SBarry Smith PetscCalloc - Allocates a cleared (zeroed) memory region aligned to `PETSC_MEMALIGN` 4068f51dc47SJunchao Zhang 4078f51dc47SJunchao Zhang Synopsis: 4088f51dc47SJunchao Zhang #include <petscsys.h> 4098f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 4108f51dc47SJunchao Zhang 4118f51dc47SJunchao Zhang Not Collective 4128f51dc47SJunchao Zhang 4138f51dc47SJunchao Zhang Input Parameter: 4148f51dc47SJunchao Zhang . m - number of bytes to allocate 4158f51dc47SJunchao Zhang 4168f51dc47SJunchao Zhang Output Parameter: 4178f51dc47SJunchao Zhang . result - memory allocated 4188f51dc47SJunchao Zhang 4198f51dc47SJunchao Zhang Level: beginner 4208f51dc47SJunchao Zhang 4218f51dc47SJunchao Zhang Notes: 4228f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 4238f51dc47SJunchao Zhang 42416a05f60SBarry Smith It is safe to allocate size 0 and pass the resulting pointer (which may or may not be `NULL`) to `PetscFree()`. 4258f51dc47SJunchao Zhang 426db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 4278f51dc47SJunchao Zhang M*/ 428f3fa974cSJacob Faibussowitsch #define PetscCalloc(m, result) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)m), (result)) 4298f51dc47SJunchao Zhang 4308f51dc47SJunchao Zhang /*MC 43187497f52SBarry Smith PetscMalloc1 - Allocates an array of memory aligned to `PETSC_MEMALIGN` 432d382aafbSBarry Smith 433eca87e8dSBarry Smith Synopsis: 434aaa7dc30SBarry Smith #include <petscsys.h> 435785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 436785e854fSJed Brown 437785e854fSJed Brown Not Collective 438785e854fSJed Brown 439785e854fSJed Brown Input Parameter: 440390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 441785e854fSJed Brown 442785e854fSJed Brown Output Parameter: 4431fe1b817SJunchao Zhang . r1 - memory allocated 444785e854fSJed Brown 44516a05f60SBarry Smith Level: beginner 44616a05f60SBarry Smith 447e28ce29aSPatrick Sanan Note: 448e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 44987497f52SBarry Smith multiply the number of elements requested by the `sizeof()` the type. For example use 45016a05f60SBarry Smith .vb 45116a05f60SBarry Smith PetscInt *id; 45216a05f60SBarry Smith PetscMalloc1(10,&id); 45316a05f60SBarry Smith .ve 454390e1bf2SBarry Smith not 45516a05f60SBarry Smith .vb 45616a05f60SBarry Smith PetscInt *id; 45716a05f60SBarry Smith PetscMalloc1(10*sizeof(PetscInt),&id); 45816a05f60SBarry Smith .ve 459390e1bf2SBarry Smith 46087497f52SBarry Smith Does not zero the memory allocated, use `PetscCalloc1()` to obtain memory that has been zeroed. 461390e1bf2SBarry Smith 462db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 463785e854fSJed Brown M*/ 464f3fa974cSJacob Faibussowitsch #define PetscMalloc1(m1, r1) PetscMallocA(1, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1)) 465785e854fSJed Brown 466785e854fSJed Brown /*MC 46787497f52SBarry Smith PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to `PETSC_MEMALIGN` 4681795a4d1SJed Brown 4691795a4d1SJed Brown Synopsis: 470aaa7dc30SBarry Smith #include <petscsys.h> 4711795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 4721795a4d1SJed Brown 4731795a4d1SJed Brown Not Collective 4741795a4d1SJed Brown 4751795a4d1SJed Brown Input Parameter: 4761795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 4771795a4d1SJed Brown 4781795a4d1SJed Brown Output Parameter: 4791fe1b817SJunchao Zhang . r1 - memory allocated 4801795a4d1SJed Brown 48116a05f60SBarry Smith Level: beginner 48216a05f60SBarry Smith 48395bd0b28SBarry Smith Note: 48487497f52SBarry Smith See `PetsMalloc1()` for more details on usage. 485390e1bf2SBarry Smith 486db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 4871795a4d1SJed Brown M*/ 488f3fa974cSJacob Faibussowitsch #define PetscCalloc1(m1, r1) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1)) 4891795a4d1SJed Brown 4901795a4d1SJed Brown /*MC 49187497f52SBarry Smith PetscMalloc2 - Allocates 2 arrays of memory both aligned to `PETSC_MEMALIGN` 492d382aafbSBarry Smith 493eca87e8dSBarry Smith Synopsis: 494aaa7dc30SBarry Smith #include <petscsys.h> 495dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 496eca87e8dSBarry Smith 497eca87e8dSBarry Smith Not Collective 498eca87e8dSBarry Smith 499d8d19677SJose E. Roman Input Parameters: 500d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 501dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 502d382aafbSBarry Smith 503d8d19677SJose E. Roman Output Parameters: 504d382aafbSBarry Smith + r1 - memory allocated in first chunk 505d382aafbSBarry Smith - r2 - memory allocated in second chunk 506d382aafbSBarry Smith 507d382aafbSBarry Smith Level: developer 508d382aafbSBarry Smith 509db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 510d382aafbSBarry Smith M*/ 511f3fa974cSJacob Faibussowitsch #define PetscMalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2)) 512d382aafbSBarry Smith 513d382aafbSBarry Smith /*MC 51487497f52SBarry Smith PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to `PETSC_MEMALIGN` 515d382aafbSBarry Smith 516eca87e8dSBarry Smith Synopsis: 517aaa7dc30SBarry Smith #include <petscsys.h> 5181795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 519eca87e8dSBarry Smith 520eca87e8dSBarry Smith Not Collective 521eca87e8dSBarry Smith 522d8d19677SJose E. Roman Input Parameters: 523d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5241795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5251795a4d1SJed Brown 526d8d19677SJose E. Roman Output Parameters: 5271795a4d1SJed Brown + r1 - memory allocated in first chunk 5281795a4d1SJed Brown - r2 - memory allocated in second chunk 5291795a4d1SJed Brown 5301795a4d1SJed Brown Level: developer 5311795a4d1SJed Brown 532db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 5331795a4d1SJed Brown M*/ 534f3fa974cSJacob Faibussowitsch #define PetscCalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2)) 5351795a4d1SJed Brown 5361795a4d1SJed Brown /*MC 53787497f52SBarry Smith PetscMalloc3 - Allocates 3 arrays of memory, all aligned to `PETSC_MEMALIGN` 538d382aafbSBarry Smith 539d382aafbSBarry Smith Synopsis: 540aaa7dc30SBarry Smith #include <petscsys.h> 541dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 542d382aafbSBarry Smith 543d382aafbSBarry Smith Not Collective 544d382aafbSBarry Smith 545d8d19677SJose E. Roman Input Parameters: 546d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 547d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 548dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 549d382aafbSBarry Smith 550d8d19677SJose E. Roman Output Parameters: 551d382aafbSBarry Smith + r1 - memory allocated in first chunk 552d382aafbSBarry Smith . r2 - memory allocated in second chunk 553d382aafbSBarry Smith - r3 - memory allocated in third chunk 554d382aafbSBarry Smith 555d382aafbSBarry Smith Level: developer 556d382aafbSBarry Smith 557db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc3()`, `PetscFree3()` 558d382aafbSBarry Smith M*/ 559f3fa974cSJacob Faibussowitsch #define PetscMalloc3(m1, r1, m2, r2, m3, r3) \ 560f3fa974cSJacob Faibussowitsch PetscMallocA(3, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3)) 561d382aafbSBarry Smith 562d382aafbSBarry Smith /*MC 56387497f52SBarry Smith PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 564d382aafbSBarry Smith 565eca87e8dSBarry Smith Synopsis: 566aaa7dc30SBarry Smith #include <petscsys.h> 5671795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 568eca87e8dSBarry Smith 569eca87e8dSBarry Smith Not Collective 570eca87e8dSBarry Smith 571d8d19677SJose E. Roman Input Parameters: 572d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 573d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 5741795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 5751795a4d1SJed Brown 576d8d19677SJose E. Roman Output Parameters: 5771795a4d1SJed Brown + r1 - memory allocated in first chunk 5781795a4d1SJed Brown . r2 - memory allocated in second chunk 5791795a4d1SJed Brown - r3 - memory allocated in third chunk 5801795a4d1SJed Brown 5811795a4d1SJed Brown Level: developer 5821795a4d1SJed Brown 583db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc2()`, `PetscMalloc3()`, `PetscFree3()` 5841795a4d1SJed Brown M*/ 585f3fa974cSJacob Faibussowitsch #define PetscCalloc3(m1, r1, m2, r2, m3, r3) \ 586f3fa974cSJacob Faibussowitsch PetscMallocA(3, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3)) 5871795a4d1SJed Brown 5881795a4d1SJed Brown /*MC 58987497f52SBarry Smith PetscMalloc4 - Allocates 4 arrays of memory, all aligned to `PETSC_MEMALIGN` 590d382aafbSBarry Smith 591d382aafbSBarry Smith Synopsis: 592aaa7dc30SBarry Smith #include <petscsys.h> 593dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 594d382aafbSBarry Smith 595d382aafbSBarry Smith Not Collective 596d382aafbSBarry Smith 597d8d19677SJose E. Roman Input Parameters: 598d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 599d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 600d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 601dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 602d382aafbSBarry Smith 603d8d19677SJose E. Roman Output Parameters: 604d382aafbSBarry Smith + r1 - memory allocated in first chunk 605d382aafbSBarry Smith . r2 - memory allocated in second chunk 606d382aafbSBarry Smith . r3 - memory allocated in third chunk 607d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 608d382aafbSBarry Smith 609d382aafbSBarry Smith Level: developer 610d382aafbSBarry Smith 611db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 612d382aafbSBarry Smith M*/ 6139371c9d4SSatish Balay #define PetscMalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 614f3fa974cSJacob Faibussowitsch PetscMallocA(4, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4)) 615d382aafbSBarry Smith 616d382aafbSBarry Smith /*MC 61787497f52SBarry Smith PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 618d382aafbSBarry Smith 619eca87e8dSBarry Smith Synopsis: 620aaa7dc30SBarry Smith #include <petscsys.h> 6211795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 622eca87e8dSBarry Smith 623eca87e8dSBarry Smith Not Collective 624eca87e8dSBarry Smith 625e28ce29aSPatrick Sanan Input Parameters: 626d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 627d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 628d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6291795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6301795a4d1SJed Brown 631e28ce29aSPatrick Sanan Output Parameters: 6321795a4d1SJed Brown + r1 - memory allocated in first chunk 6331795a4d1SJed Brown . r2 - memory allocated in second chunk 6341795a4d1SJed Brown . r3 - memory allocated in third chunk 6351795a4d1SJed Brown - r4 - memory allocated in fourth chunk 6361795a4d1SJed Brown 6371795a4d1SJed Brown Level: developer 6381795a4d1SJed Brown 639db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 6401795a4d1SJed Brown M*/ 6419371c9d4SSatish Balay #define PetscCalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 642f3fa974cSJacob Faibussowitsch PetscMallocA(4, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4)) 6431795a4d1SJed Brown 6441795a4d1SJed Brown /*MC 64587497f52SBarry Smith PetscMalloc5 - Allocates 5 arrays of memory, all aligned to `PETSC_MEMALIGN` 646d382aafbSBarry Smith 647d382aafbSBarry Smith Synopsis: 648aaa7dc30SBarry Smith #include <petscsys.h> 649dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 650d382aafbSBarry Smith 651d382aafbSBarry Smith Not Collective 652d382aafbSBarry Smith 653e28ce29aSPatrick Sanan Input Parameters: 654d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 655d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 656d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 657d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 658dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 659d382aafbSBarry Smith 660e28ce29aSPatrick Sanan Output Parameters: 661d382aafbSBarry Smith + r1 - memory allocated in first chunk 662d382aafbSBarry Smith . r2 - memory allocated in second chunk 663d382aafbSBarry Smith . r3 - memory allocated in third chunk 664d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 665d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 666d382aafbSBarry Smith 667d382aafbSBarry Smith Level: developer 668d382aafbSBarry Smith 669db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc5()`, `PetscFree5()` 670d382aafbSBarry Smith M*/ 6719371c9d4SSatish Balay #define PetscMalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 672f3fa974cSJacob Faibussowitsch PetscMallocA(5, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5)) 673d382aafbSBarry Smith 674d382aafbSBarry Smith /*MC 67587497f52SBarry Smith PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 676d382aafbSBarry Smith 677eca87e8dSBarry Smith Synopsis: 678aaa7dc30SBarry Smith #include <petscsys.h> 6791795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 680eca87e8dSBarry Smith 681eca87e8dSBarry Smith Not Collective 682eca87e8dSBarry Smith 683e28ce29aSPatrick Sanan Input Parameters: 684d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 685d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 686d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 687d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 6881795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 6891795a4d1SJed Brown 690e28ce29aSPatrick Sanan Output Parameters: 6911795a4d1SJed Brown + r1 - memory allocated in first chunk 6921795a4d1SJed Brown . r2 - memory allocated in second chunk 6931795a4d1SJed Brown . r3 - memory allocated in third chunk 6941795a4d1SJed Brown . r4 - memory allocated in fourth chunk 6951795a4d1SJed Brown - r5 - memory allocated in fifth chunk 6961795a4d1SJed Brown 6971795a4d1SJed Brown Level: developer 6981795a4d1SJed Brown 699db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc5()`, `PetscFree5()` 7001795a4d1SJed Brown M*/ 7019371c9d4SSatish Balay #define PetscCalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 702f3fa974cSJacob Faibussowitsch PetscMallocA(5, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5)) 703d382aafbSBarry Smith 704d382aafbSBarry Smith /*MC 70587497f52SBarry Smith PetscMalloc6 - Allocates 6 arrays of memory, all aligned to `PETSC_MEMALIGN` 706d382aafbSBarry Smith 707d382aafbSBarry Smith Synopsis: 708aaa7dc30SBarry Smith #include <petscsys.h> 709dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 710d382aafbSBarry Smith 711d382aafbSBarry Smith Not Collective 712d382aafbSBarry Smith 713e28ce29aSPatrick Sanan Input Parameters: 714d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 715d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 716d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 717d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 718d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 719dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 720d382aafbSBarry Smith 721e28ce29aSPatrick Sanan Output Parameteasr: 722d382aafbSBarry Smith + r1 - memory allocated in first chunk 723d382aafbSBarry Smith . r2 - memory allocated in second chunk 724d382aafbSBarry Smith . r3 - memory allocated in third chunk 725d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 726d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 727d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 728d382aafbSBarry Smith 729d382aafbSBarry Smith Level: developer 730d382aafbSBarry Smith 731db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc6()`, `PetscFree3()`, `PetscFree4()`, `PetscFree5()`, `PetscFree6()` 732d382aafbSBarry Smith M*/ 7339371c9d4SSatish Balay #define PetscMalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 734f3fa974cSJacob Faibussowitsch PetscMallocA(6, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6)) 735d382aafbSBarry Smith 736d382aafbSBarry Smith /*MC 73787497f52SBarry Smith PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 738d382aafbSBarry Smith 739eca87e8dSBarry Smith Synopsis: 740aaa7dc30SBarry Smith #include <petscsys.h> 7411795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 742eca87e8dSBarry Smith 743eca87e8dSBarry Smith Not Collective 744eca87e8dSBarry Smith 745e28ce29aSPatrick Sanan Input Parameters: 746d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 747d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 748d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 749d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 750d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 7511795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 7521795a4d1SJed Brown 753e28ce29aSPatrick Sanan Output Parameters: 7541795a4d1SJed Brown + r1 - memory allocated in first chunk 7551795a4d1SJed Brown . r2 - memory allocated in second chunk 7561795a4d1SJed Brown . r3 - memory allocated in third chunk 7571795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7581795a4d1SJed Brown . r5 - memory allocated in fifth chunk 7591795a4d1SJed Brown - r6 - memory allocated in sixth chunk 7601795a4d1SJed Brown 7611795a4d1SJed Brown Level: developer 7621795a4d1SJed Brown 763db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc6()`, `PetscFree6()` 7641795a4d1SJed Brown M*/ 7659371c9d4SSatish Balay #define PetscCalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 766f3fa974cSJacob Faibussowitsch PetscMallocA(6, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6)) 7671795a4d1SJed Brown 7681795a4d1SJed Brown /*MC 76987497f52SBarry Smith PetscMalloc7 - Allocates 7 arrays of memory, all aligned to `PETSC_MEMALIGN` 770d382aafbSBarry Smith 771d382aafbSBarry Smith Synopsis: 772aaa7dc30SBarry Smith #include <petscsys.h> 773dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 774d382aafbSBarry Smith 775d382aafbSBarry Smith Not Collective 776d382aafbSBarry Smith 777e28ce29aSPatrick Sanan Input Parameters: 778d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 779d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 780d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 781d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 782d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 783d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 784dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 785d382aafbSBarry Smith 786e28ce29aSPatrick Sanan Output Parameters: 787d382aafbSBarry Smith + r1 - memory allocated in first chunk 788d382aafbSBarry Smith . r2 - memory allocated in second chunk 789d382aafbSBarry Smith . r3 - memory allocated in third chunk 790d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 791d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 792d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 793eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 794d382aafbSBarry Smith 795d382aafbSBarry Smith Level: developer 796d382aafbSBarry Smith 797db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc7()`, `PetscFree7()` 798d382aafbSBarry Smith M*/ 7999371c9d4SSatish Balay #define PetscMalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 800f3fa974cSJacob Faibussowitsch PetscMallocA(7, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6), ((size_t)((size_t)m7) * sizeof(**(r7))), (r7)) 801d382aafbSBarry Smith 802d382aafbSBarry Smith /*MC 80387497f52SBarry Smith PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 8041795a4d1SJed Brown 8051795a4d1SJed Brown Synopsis: 806aaa7dc30SBarry Smith #include <petscsys.h> 8071795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8081795a4d1SJed Brown 8091795a4d1SJed Brown Not Collective 8101795a4d1SJed Brown 811e28ce29aSPatrick Sanan Input Parameters: 8121795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8131795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8141795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8151795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8161795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8171795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8181795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8191795a4d1SJed Brown 820e28ce29aSPatrick Sanan Output Parameters: 8211795a4d1SJed Brown + r1 - memory allocated in first chunk 8221795a4d1SJed Brown . r2 - memory allocated in second chunk 8231795a4d1SJed Brown . r3 - memory allocated in third chunk 8241795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8251795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8261795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8271795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8281795a4d1SJed Brown 8291795a4d1SJed Brown Level: developer 8301795a4d1SJed Brown 831db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc7()`, `PetscFree7()` 8321795a4d1SJed Brown M*/ 8339371c9d4SSatish Balay #define PetscCalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 834f3fa974cSJacob Faibussowitsch PetscMallocA(7, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6), ((size_t)((size_t)m7) * sizeof(**(r7))), (r7)) 8351795a4d1SJed Brown 8361795a4d1SJed Brown /*MC 83787497f52SBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to `PETSC_MEMALIGN` 838d382aafbSBarry Smith 839eca87e8dSBarry Smith Synopsis: 840aaa7dc30SBarry Smith #include <petscsys.h> 841b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 842eca87e8dSBarry Smith 843eca87e8dSBarry Smith Not Collective 844eca87e8dSBarry Smith 845d382aafbSBarry Smith Output Parameter: 846b00a9115SJed Brown . result - memory allocated, sized to match pointer type 847d382aafbSBarry Smith 848d382aafbSBarry Smith Level: beginner 849d382aafbSBarry Smith 850fea72eb4SStefano Zampini .seealso: `PetscFree()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc1()` 851d382aafbSBarry Smith M*/ 852b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1, (b)) 853ad0619ddSBarry Smith 854f4f49eeaSPierre Jolivet #define PetscNewLog(o, b) PETSC_DEPRECATED_MACRO(3, 18, 0, "PetscNew()", ) PetscNew(b) 855d382aafbSBarry Smith 856d382aafbSBarry Smith /*MC 857d382aafbSBarry Smith PetscFree - Frees memory 858d382aafbSBarry Smith 859eca87e8dSBarry Smith Synopsis: 860aaa7dc30SBarry Smith #include <petscsys.h> 861eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 862eca87e8dSBarry Smith 863eca87e8dSBarry Smith Not Collective 864eca87e8dSBarry Smith 865d382aafbSBarry Smith Input Parameter: 86616a05f60SBarry Smith . memory - memory to free (the pointer is ALWAYS set to `NULL` upon success) 867d382aafbSBarry Smith 868d382aafbSBarry Smith Level: beginner 869d382aafbSBarry Smith 87095bd0b28SBarry Smith Notes: 87187497f52SBarry Smith Do not free memory obtained with `PetscMalloc2()`, `PetscCalloc2()` etc, they must be freed with `PetscFree2()` etc. 872390e1bf2SBarry Smith 87316a05f60SBarry Smith It is safe to call `PetscFree()` on a `NULL` pointer. 874d382aafbSBarry Smith 875fea72eb4SStefano Zampini .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc1()` 876d382aafbSBarry Smith M*/ 8773ba16761SJacob Faibussowitsch #define PetscFree(a) ((PetscErrorCode)((*PetscTrFree)((void *)(a), __LINE__, PETSC_FUNCTION_NAME, __FILE__) || ((a) = PETSC_NULLPTR, PETSC_SUCCESS))) 878d382aafbSBarry Smith 879d382aafbSBarry Smith /*MC 88087497f52SBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with `PetscMalloc2()` 881d382aafbSBarry Smith 882eca87e8dSBarry Smith Synopsis: 883aaa7dc30SBarry Smith #include <petscsys.h> 884eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 885eca87e8dSBarry Smith 886eca87e8dSBarry Smith Not Collective 887eca87e8dSBarry Smith 888e28ce29aSPatrick Sanan Input Parameters: 889d382aafbSBarry Smith + memory1 - memory to free 890d382aafbSBarry Smith - memory2 - 2nd memory to free 891d382aafbSBarry Smith 892d382aafbSBarry Smith Level: developer 893d382aafbSBarry Smith 8947e17494fSJames Wright Notes: 89587497f52SBarry Smith Memory must have been obtained with `PetscMalloc2()` 896d382aafbSBarry Smith 8977e17494fSJames Wright The arguments need to be in the same order as they were in the call to `PetscMalloc2()` 8987e17494fSJames Wright 899db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()` 900d382aafbSBarry Smith M*/ 901ba282f50SJed Brown #define PetscFree2(m1, m2) PetscFreeA(2, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2)) 902d382aafbSBarry Smith 903d382aafbSBarry Smith /*MC 90487497f52SBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with `PetscMalloc3()` 905d382aafbSBarry Smith 906eca87e8dSBarry Smith Synopsis: 907aaa7dc30SBarry Smith #include <petscsys.h> 908eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 909eca87e8dSBarry Smith 910eca87e8dSBarry Smith Not Collective 911eca87e8dSBarry Smith 912e28ce29aSPatrick Sanan Input Parameters: 913d382aafbSBarry Smith + memory1 - memory to free 914d382aafbSBarry Smith . memory2 - 2nd memory to free 915d382aafbSBarry Smith - memory3 - 3rd memory to free 916d382aafbSBarry Smith 917d382aafbSBarry Smith Level: developer 918d382aafbSBarry Smith 9197e17494fSJames Wright Notes: 92087497f52SBarry Smith Memory must have been obtained with `PetscMalloc3()` 921d382aafbSBarry Smith 9227e17494fSJames Wright The arguments need to be in the same order as they were in the call to `PetscMalloc3()` 9237e17494fSJames Wright 924db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()` 925d382aafbSBarry Smith M*/ 926ba282f50SJed Brown #define PetscFree3(m1, m2, m3) PetscFreeA(3, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3)) 927d382aafbSBarry Smith 928d382aafbSBarry Smith /*MC 92987497f52SBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with `PetscMalloc4()` 930d382aafbSBarry Smith 931eca87e8dSBarry Smith Synopsis: 932aaa7dc30SBarry Smith #include <petscsys.h> 933eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 934eca87e8dSBarry Smith 935eca87e8dSBarry Smith Not Collective 936eca87e8dSBarry Smith 937e28ce29aSPatrick Sanan Input Parameters: 938d382aafbSBarry Smith + m1 - memory to free 939d382aafbSBarry Smith . m2 - 2nd memory to free 940d382aafbSBarry Smith . m3 - 3rd memory to free 941d382aafbSBarry Smith - m4 - 4th memory to free 942d382aafbSBarry Smith 943d382aafbSBarry Smith Level: developer 944d382aafbSBarry Smith 9457e17494fSJames Wright Notes: 94687497f52SBarry Smith Memory must have been obtained with `PetscMalloc4()` 947d382aafbSBarry Smith 9487e17494fSJames Wright The arguments need to be in the same order as they were in the call to `PetscMalloc4()` 9497e17494fSJames Wright 950db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()` 951d382aafbSBarry Smith M*/ 952ba282f50SJed Brown #define PetscFree4(m1, m2, m3, m4) PetscFreeA(4, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4)) 953d382aafbSBarry Smith 954d382aafbSBarry Smith /*MC 95587497f52SBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with `PetscMalloc5()` 956d382aafbSBarry Smith 957eca87e8dSBarry Smith Synopsis: 958aaa7dc30SBarry Smith #include <petscsys.h> 959eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 960eca87e8dSBarry Smith 961eca87e8dSBarry Smith Not Collective 962eca87e8dSBarry Smith 963e28ce29aSPatrick Sanan Input Parameters: 964d382aafbSBarry Smith + m1 - memory to free 965d382aafbSBarry Smith . m2 - 2nd memory to free 966d382aafbSBarry Smith . m3 - 3rd memory to free 967d382aafbSBarry Smith . m4 - 4th memory to free 968d382aafbSBarry Smith - m5 - 5th memory to free 969d382aafbSBarry Smith 970d382aafbSBarry Smith Level: developer 971d382aafbSBarry Smith 9727e17494fSJames Wright Notes: 97387497f52SBarry Smith Memory must have been obtained with `PetscMalloc5()` 974d382aafbSBarry Smith 9757e17494fSJames Wright The arguments need to be in the same order as they were in the call to `PetscMalloc5()` 9767e17494fSJames Wright 977db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()` 978d382aafbSBarry Smith M*/ 979ba282f50SJed Brown #define PetscFree5(m1, m2, m3, m4, m5) PetscFreeA(5, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5)) 980d382aafbSBarry Smith 981d382aafbSBarry Smith /*MC 98287497f52SBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with `PetscMalloc6()` 983d382aafbSBarry Smith 984eca87e8dSBarry Smith Synopsis: 985aaa7dc30SBarry Smith #include <petscsys.h> 986eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 987eca87e8dSBarry Smith 988eca87e8dSBarry Smith Not Collective 989eca87e8dSBarry Smith 990e28ce29aSPatrick Sanan Input Parameters: 991d382aafbSBarry Smith + m1 - memory to free 992d382aafbSBarry Smith . m2 - 2nd memory to free 993d382aafbSBarry Smith . m3 - 3rd memory to free 994d382aafbSBarry Smith . m4 - 4th memory to free 995d382aafbSBarry Smith . m5 - 5th memory to free 996d382aafbSBarry Smith - m6 - 6th memory to free 997d382aafbSBarry Smith 998d382aafbSBarry Smith Level: developer 999d382aafbSBarry Smith 10007e17494fSJames Wright Notes: 100187497f52SBarry Smith Memory must have been obtained with `PetscMalloc6()` 1002d382aafbSBarry Smith 10037e17494fSJames Wright The arguments need to be in the same order as they were in the call to `PetscMalloc6()` 10047e17494fSJames Wright 1005db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()` 1006d382aafbSBarry Smith M*/ 1007ba282f50SJed Brown #define PetscFree6(m1, m2, m3, m4, m5, m6) PetscFreeA(6, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6)) 1008d382aafbSBarry Smith 1009d382aafbSBarry Smith /*MC 101087497f52SBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with `PetscMalloc7()` 1011d382aafbSBarry Smith 1012eca87e8dSBarry Smith Synopsis: 1013aaa7dc30SBarry Smith #include <petscsys.h> 1014eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1015eca87e8dSBarry Smith 1016eca87e8dSBarry Smith Not Collective 1017eca87e8dSBarry Smith 1018e28ce29aSPatrick Sanan Input Parameters: 1019d382aafbSBarry Smith + m1 - memory to free 1020d382aafbSBarry Smith . m2 - 2nd memory to free 1021d382aafbSBarry Smith . m3 - 3rd memory to free 1022d382aafbSBarry Smith . m4 - 4th memory to free 1023d382aafbSBarry Smith . m5 - 5th memory to free 1024d382aafbSBarry Smith . m6 - 6th memory to free 1025d382aafbSBarry Smith - m7 - 7th memory to free 1026d382aafbSBarry Smith 1027d382aafbSBarry Smith Level: developer 1028d382aafbSBarry Smith 10297e17494fSJames Wright Notes: 103087497f52SBarry Smith Memory must have been obtained with `PetscMalloc7()` 1031d382aafbSBarry Smith 10327e17494fSJames Wright The arguments need to be in the same order as they were in the call to `PetscMalloc7()` 10337e17494fSJames Wright 1034db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`, 1035db781477SPatrick Sanan `PetscMalloc7()` 1036d382aafbSBarry Smith M*/ 1037ba282f50SJed Brown #define PetscFree7(m1, m2, m3, m4, m5, m6, m7) PetscFreeA(7, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6), &(m7)) 1038d382aafbSBarry Smith 1039ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int, PetscBool, int, const char *, const char *, size_t, void *, ...); 1040ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int, int, const char *, const char *, void *, ...); 1041071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t, PetscBool, int, const char[], const char[], void **); 1042efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void *, int, const char[], const char[]); 10433221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t, int, const char[], const char[], void **); 1044ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 104592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t, PetscBool, int, const char[], const char[], void **), PetscErrorCode (*)(void *, int, const char[], const char[]), PetscErrorCode (*)(size_t, int, const char[], const char[], void **)); 1046014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1047d382aafbSBarry Smith 1048d382aafbSBarry Smith /* 1049c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1050c1706be6SHong Zhang */ 1051c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1052c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 105331f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 105431f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 105531f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 105631f06eaaSHong Zhang #endif 105759af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 105859af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 105959af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 106059af0bd3SScott Kruger #endif 106159af0bd3SScott Kruger 1062a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 106336763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1064a5057860SBarry Smith 1065a5057860SBarry Smith /* 106666d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1067d382aafbSBarry Smith */ 1068014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 106992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1070014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1071014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1072e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1073e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int, PetscLogDouble *); 107492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool, PetscBool); 107592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool *, PetscBool *, PetscBool *); 1076efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int, const char[], const char[]); 107792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 107892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool *); 1079608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1080608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool *); 1081d382aafbSBarry Smith 1082014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType, MPI_Datatype *); 1083014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype, PetscDataType *); 1084014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType, size_t *); 10858e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char *, PetscDataType *, PetscBool *); 1086d382aafbSBarry Smith 1087d382aafbSBarry Smith /* 1088d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1089d382aafbSBarry Smith */ 1090367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1091570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1092de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1093014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1094014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1095d9822059SBarry Smith #else 1096de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1097d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1098d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1099d9822059SBarry Smith #endif 110062e5d2d2SJDBetteridge PETSC_EXTERN MPI_Op Petsc_Garbage_SetIntersectOp; 110162e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 110262e5d2d2SJDBetteridge 1103a2498233SPierre Jolivet #if (defined(PETSC_HAVE_REAL___FLOAT128) && !defined(PETSC_SKIP_REAL___FLOAT128)) || (defined(PETSC_HAVE_REAL___FP16) && !defined(PETSC_SKIP_REAL___FP16)) 1104613bf2b2SPierre Jolivet /*MC 110516a05f60SBarry Smith MPIU_SUM___FP16___FLOAT128 - MPI_Op that acts as a replacement for `MPI_SUM` with 110616a05f60SBarry Smith custom `MPI_Datatype` `MPIU___FLOAT128`, `MPIU___COMPLEX128`, and `MPIU___FP16`. 1107613bf2b2SPierre Jolivet 1108613bf2b2SPierre Jolivet Level: advanced 1109613bf2b2SPierre Jolivet 1110613bf2b2SPierre Jolivet Developer Note: 1111613bf2b2SPierre Jolivet This should be unified with `MPIU_SUM` 1112613bf2b2SPierre Jolivet 1113613bf2b2SPierre Jolivet .seealso: `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 1114613bf2b2SPierre Jolivet M*/ 11159e517322SPierre Jolivet PETSC_EXTERN MPI_Op MPIU_SUM___FP16___FLOAT128; 1116613bf2b2SPierre Jolivet #endif 1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 1118d382aafbSBarry Smith 111993d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Send(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 112093d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Recv(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 1121eb3f98d2SBarry Smith 1122639ff905SBarry Smith /* 1123639ff905SBarry Smith Defines PETSc error handling. 1124639ff905SBarry Smith */ 1125639ff905SBarry Smith #include <petscerror.h> 1126d382aafbSBarry Smith 1127660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabled; /* code is running in the PETSc test harness CI */ 1128660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabledPortableErrorOutput; /* error output is stripped to ensure portability of error messages across systems */ 1129660278c0SBarry Smith PETSC_EXTERN const char *PetscCIFilename(const char *); 1130660278c0SBarry Smith PETSC_EXTERN int PetscCILinenumber(int); 1131660278c0SBarry Smith 1132f3fa974cSJacob Faibussowitsch #define PETSC_SMALLEST_CLASSID ((PetscClassId)1211211) 1133014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1134014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1135014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[], PetscClassId *); 113681256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject, PetscObjectId *); 113781256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject, PetscObjectId, PetscBool *); 113881256985SMatthew G. Knepley 1139d382aafbSBarry Smith /* 1140d382aafbSBarry Smith Routines that get memory usage information from the OS 1141d382aafbSBarry Smith */ 1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1145b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1146d382aafbSBarry Smith 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1148d382aafbSBarry Smith 1149d382aafbSBarry Smith /* 1150d382aafbSBarry Smith Initialization of PETSc 1151d382aafbSBarry Smith */ 1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int *, char ***, const char[], const char[]); 1153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int, char **, const char[], const char[]); 1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1157014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1158014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int *, char ***); 1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1162d382aafbSBarry Smith 1163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1164607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 11654bf303faSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSysFinalizePackage(void); 1166d382aafbSBarry Smith 1167014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[], const char[]); 1168014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject, const char[]); 1171d382aafbSBarry Smith 1172a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscBool *); 1173a50e088cSMatthew G. Knepley 1174d382aafbSBarry Smith /* 1175d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 11762981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1177d382aafbSBarry Smith */ 11785ddc805bSBarry Smith 11795ddc805bSBarry Smith /*S 11808434afd1SBarry Smith PetscVoidFn - A prototype of a void (fn)(void) function 11815ddc805bSBarry Smith 11825ddc805bSBarry Smith Level: developer 11835ddc805bSBarry Smith 11845ddc805bSBarry Smith Notes: 11858434afd1SBarry Smith The deprecated `PetscVoidFunction` works as a replacement for `PetscVoidFn` *. 11865ddc805bSBarry Smith 11878434afd1SBarry Smith The deprecated `PetscVoidStarFunction` works as a replacement for `PetscVoidFn` **. 11885ddc805bSBarry Smith 11895ddc805bSBarry Smith .seealso: `PetscObject`, `PetscObjectDestroy()` 11905ddc805bSBarry Smith S*/ 11918434afd1SBarry Smith PETSC_EXTERN_TYPEDEF typedef void(PetscVoidFn)(void); 11925ddc805bSBarry Smith 11938434afd1SBarry Smith PETSC_EXTERN_TYPEDEF typedef PetscVoidFn *PetscVoidFunction; 11948434afd1SBarry Smith PETSC_EXTERN_TYPEDEF typedef PetscVoidFn **PetscVoidStarFunction; 11955ddc805bSBarry Smith 11965ddc805bSBarry Smith /*S 11978434afd1SBarry Smith PetscErrorCodeFn - A prototype of a PetscErrorCode (fn)(void) function 11985ddc805bSBarry Smith 11995ddc805bSBarry Smith Level: developer 12005ddc805bSBarry Smith 12015ddc805bSBarry Smith Notes: 12028434afd1SBarry Smith The deprecated `PetscErrorCodeFunction` works as a replacement for `PetscErrorCodeFn` *. 12035ddc805bSBarry Smith 12045ddc805bSBarry Smith .seealso: `PetscObject`, `PetscObjectDestroy()` 12055ddc805bSBarry Smith S*/ 12068434afd1SBarry Smith PETSC_EXTERN_TYPEDEF typedef PetscErrorCode(PetscErrorCodeFn)(void); 12075ddc805bSBarry Smith 12088434afd1SBarry Smith PETSC_EXTERN_TYPEDEF typedef PetscErrorCodeFn *PetscErrorCodeFunction; 1209d382aafbSBarry Smith 1210d382aafbSBarry Smith /* 1211d382aafbSBarry Smith Functions that can act on any PETSc object. 1212d382aafbSBarry Smith */ 1213014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject *); 1214014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject, MPI_Comm *); 1215014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject, PetscClassId *); 1216014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject, const char *[]); 1217014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject, const char *[]); 1218014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject, const char[]); 1219014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject, const char *[]); 1220014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject, PetscInt); 1221014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject, PetscInt *); 1222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject, PetscObject, PetscInt); 1223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject, PetscInt *); 1225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1226014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject, PetscMPIInt *); 1227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject, const char[], PetscObject); 1228014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject, const char[]); 1229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject, const char[], PetscObject *); 1230bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject, const char[], void (*)(void)); 12318434afd1SBarry Smith #define PetscObjectComposeFunction(a, b, ...) PetscObjectComposeFunction_Private((a), (b), (PetscVoidFn *)(__VA_ARGS__)) 1232014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 12340eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 12350eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject, PetscObject); 1236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm, PetscMPIInt *); 1237d382aafbSBarry Smith 1238665c2dedSJed Brown #include <petscviewertypes.h> 1239639ff905SBarry Smith #include <petscoptions.h> 1240639ff905SBarry Smith 1241608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer, PetscBool, PetscLogDouble); 1242608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool *); 1243608c71bfSMatthew G. Knepley 12440633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm, PetscInt, PetscObject *, PetscInt *, PetscInt *); 12450633abcbSJed Brown 1246c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer, const char[]); 1247dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject, PetscViewer); 1248639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject, PetscViewer); 12498434afd1SBarry Smith #define PetscObjectQueryFunction(obj, name, fptr) PetscObjectQueryFunction_Private((obj), (name), (PetscVoidFn **)(fptr)) 12500005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject, const char[], void (**)(void)); 1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject, const char[]); 1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject, const char[]); 1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject, const char[]); 1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject, const char *[]); 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject, const char[]); 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1258685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject, PetscObject, const char[]); 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject, const char[], PetscBool *); 1261013e2dc7SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectObjectTypeCompare(PetscObject, PetscObject, PetscBool *); 12624099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject, const char[], PetscBool *); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1264b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1267d382aafbSBarry Smith 1268e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 12697aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1270e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1271e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject, PetscBool); 1272e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1273e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1274e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1275e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1276e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1277e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1278e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 127915681b3cSBarry Smith 1280ec7429eaSBarry Smith #else 12813ba16761SJacob Faibussowitsch #define PetscSAWsBlock() PETSC_SUCCESS 12823ba16761SJacob Faibussowitsch #define PetscObjectSAWsViewOff(obj) PETSC_SUCCESS 12833ba16761SJacob Faibussowitsch #define PetscObjectSAWsSetBlock(obj, flg) PETSC_SUCCESS 12843ba16761SJacob Faibussowitsch #define PetscObjectSAWsBlock(obj) PETSC_SUCCESS 12853ba16761SJacob Faibussowitsch #define PetscObjectSAWsGrantAccess(obj) PETSC_SUCCESS 12863ba16761SJacob Faibussowitsch #define PetscObjectSAWsTakeAccess(obj) PETSC_SUCCESS 12873ba16761SJacob Faibussowitsch #define PetscStackViewSAWs() PETSC_SUCCESS 12883ba16761SJacob Faibussowitsch #define PetscStackSAWsViewOff() PETSC_SUCCESS 1289e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1290e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 129115681b3cSBarry Smith 1292ec7429eaSBarry Smith #endif 1293b90c6cbeSBarry Smith 129482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[], PetscDLMode, PetscDLHandle *); 129582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 129682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle, const char[], void **); 1297258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1298258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1299258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1300258ec3d2SMatthew G. Knepley #endif 13017d5d4d99SBarry Smith 1302a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void *, PetscStack **); 1303a64a8e02SBarry Smith 1304dfb7d7afSStefano Zampini PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE *, PetscBool); 13054bf303faSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscObjectsView(PetscViewer); 13065d83a8b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsGetObject(const char *, PetscObject *, const char **); 1307140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList *); 1308140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList, const char[], PetscObject *); 1309140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList, PetscObject, char **, PetscBool *); 1310140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *, const char[], PetscObject); 1311140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *, const char[]); 1312140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList, PetscObjectList *); 1313d382aafbSBarry Smith 1314d382aafbSBarry Smith /* 1315503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1316d382aafbSBarry Smith link libraries that will be loaded as needed. 1317d382aafbSBarry Smith */ 1318a240a19fSJed Brown 13198434afd1SBarry Smith #define PetscFunctionListAdd(list, name, fptr) PetscFunctionListAdd_Private((list), (name), (PetscVoidFn *)(fptr)) 13208434afd1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList *, const char[], PetscVoidFn *); 1321140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList *); 13220e6b6b59SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFunctionListClear(PetscFunctionList); 13238434afd1SBarry Smith #define PetscFunctionListFind(list, name, fptr) PetscFunctionListFind_Private((list), (name), (PetscVoidFn **)(fptr)) 13248434afd1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList, const char[], PetscVoidFn **); 132544ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm, FILE *, const char[], const char[], const char[], const char[], PetscFunctionList, const char[], const char[]); 1326140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList, PetscFunctionList *); 1327140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList, PetscViewer); 1328140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList, const char ***, int *); 13292e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintNonEmpty(PetscFunctionList); 13302e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintAll(void); 1331d382aafbSBarry Smith 1332014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1333014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm, PetscDLLibrary *, const char[]); 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm, PetscDLLibrary *, const char[]); 1335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm, PetscDLLibrary *, const char[], const char[], void **); 1336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm, const char[], char *, size_t, PetscBool *); 1338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm, const char[], PetscDLLibrary *); 1339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1340d382aafbSBarry Smith 1341d382aafbSBarry Smith /* 1342d382aafbSBarry Smith Useful utility routines 1343d382aafbSBarry Smith */ 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm, PetscInt *, PetscInt *); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm, PetscInt, PetscInt *, PetscInt *); 1346d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm, PetscInt *, PetscInt *); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm, PetscMPIInt); 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm, PetscMPIInt); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE *); 135158b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm, const PetscInt[2], PetscInt[2]); 135258b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm, const PetscReal[2], PetscReal[2]); 1353d382aafbSBarry Smith 135464ac3b0dSPatrick Sanan /*MC 135587497f52SBarry Smith PetscNot - negates a logical type value and returns result as a `PetscBool` 1356503cfb0cSBarry Smith 135764ac3b0dSPatrick Sanan Level: beginner 135864ac3b0dSPatrick Sanan 1359a1cb98faSBarry Smith Note: 1360a1cb98faSBarry Smith This is useful in cases like 1361a1cb98faSBarry Smith .vb 1362a1cb98faSBarry Smith int *a; 1363a1cb98faSBarry Smith PetscBool flag = PetscNot(a) 1364a1cb98faSBarry Smith .ve 1365a1cb98faSBarry Smith where !a would not return a `PetscBool` because we cannot provide a cast from int to `PetscBool` in C. 1366a1cb98faSBarry Smith 1367a1cb98faSBarry Smith .seealso: `PetscBool`, `PETSC_TRUE`, `PETSC_FALSE` 136864ac3b0dSPatrick Sanan M*/ 1369d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1370503cfb0cSBarry Smith 1371d382aafbSBarry Smith /*MC 1372d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1373d382aafbSBarry Smith 1374d382aafbSBarry Smith Synopsis: 1375aaa7dc30SBarry Smith #include <petscsys.h> 1376659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1377d382aafbSBarry Smith 13787cdbe19fSJose E. Roman Not Collective, only applies on MPI rank 0; No Fortran Support 13797cdbe19fSJose E. Roman 1380d382aafbSBarry Smith Input Parameters: 1381659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1382d382aafbSBarry Smith . format - the usual printf() format string 1383659f7ba0SBarry Smith - args - arguments to be printed 1384d382aafbSBarry Smith 1385d382aafbSBarry Smith Level: developer 1386d382aafbSBarry Smith 138795bd0b28SBarry Smith Notes: 1388659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1389659f7ba0SBarry Smith 1390659f7ba0SBarry Smith To use, write your own function, for example, 139116a05f60SBarry Smith .vb 139216a05f60SBarry Smith PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 139316a05f60SBarry Smith { 139416a05f60SBarry Smith PetscFunctionReturn(PETSC_SUCCESS); 139516a05f60SBarry Smith } 139616a05f60SBarry Smith .ve 1397d5b43468SJose E. Roman then do the assignment 1398af27ebaaSBarry Smith .vb 1399af27ebaaSBarry Smith PetscHelpPrintf = mypetschelpprintf; 1400af27ebaaSBarry Smith .ve 1401af27ebaaSBarry Smith 140287497f52SBarry Smith You can do the assignment before `PetscInitialize()`. 1403659f7ba0SBarry Smith 140487497f52SBarry Smith The default routine used is called `PetscHelpPrintfDefault()`. 1405d382aafbSBarry Smith 140616a05f60SBarry Smith .seealso: `PetscFPrintf()`, `PetscSynchronizedPrintf()`, `PetscErrorPrintf()`, `PetscHelpPrintfDefault()` 1407d382aafbSBarry Smith M*/ 14083ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1409d382aafbSBarry Smith 1410fcfd50ebSBarry Smith /* 1411fcfd50ebSBarry Smith Defines PETSc profiling. 1412fcfd50ebSBarry Smith */ 14132c8e378dSBarry Smith #include <petsclog.h> 1414fcfd50ebSBarry Smith 1415fcfd50ebSBarry Smith /* 1416fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1417fcfd50ebSBarry Smith */ 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[], char[]); 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm, const char[], const char[], FILE **); 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm, FILE *); 14213ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 1422c69effb2SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFFlush(FILE *); 14233ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14243ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char *, size_t, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14253ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char *, size_t, const char[], size_t *, ...) PETSC_ATTRIBUTE_FORMAT(3, 5); 14261b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[], size_t, const char *, PetscInt, const PetscReal[]); 1427fcfd50ebSBarry Smith 14283ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14293ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14303ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1431d382aafbSBarry Smith 1432d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char *, size_t *); 1433d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char *, char *); 1434d781fa04SBarry Smith 1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm, const char[], const char[], const char[], FILE **); 1436016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm, FILE *); 143774ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1438d382aafbSBarry Smith 14393ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14403ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14410ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm, FILE *); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm, FILE *, size_t, char[]); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm, const char[], const char[], FILE **); 1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char *[]); 1445d382aafbSBarry Smith 1446014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer, void **); 1448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer, void *); 1449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer *); 1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm, PetscContainer *); 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void *)); 1452b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void *); 1453d382aafbSBarry Smith 1454d382aafbSBarry Smith /* 1455d382aafbSBarry Smith For use in debuggers 1456d382aafbSBarry Smith */ 1457014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1458014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt, const PetscInt[], PetscViewer); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt, const PetscReal[], PetscViewer); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt, const PetscScalar[], PetscViewer); 1462d382aafbSBarry Smith 1463bbcf679cSJacob Faibussowitsch /* 1464bbcf679cSJacob Faibussowitsch Basic memory and string operations. These are usually simple wrappers 1465bbcf679cSJacob Faibussowitsch around the basic Unix system calls, but a few of them have additional 1466bbcf679cSJacob Faibussowitsch functionality and/or error checking. 1467bbcf679cSJacob Faibussowitsch */ 1468bbcf679cSJacob Faibussowitsch #include <petscstring.h> 1469bbcf679cSJacob Faibussowitsch 1470a663daf8SBarry Smith #include <stddef.h> 1471d382aafbSBarry Smith #include <stdlib.h> 14726c7e564aSBarry Smith 1473447bcd8fSJacob Faibussowitsch #if defined(PETSC_CLANG_STATIC_ANALYZER) 1474447bcd8fSJacob Faibussowitsch #define PetscPrefetchBlock(a, b, c, d) 1475447bcd8fSJacob Faibussowitsch #else 1476d382aafbSBarry Smith /*MC 1477d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1478d382aafbSBarry Smith 1479eca87e8dSBarry Smith Synopsis: 1480aaa7dc30SBarry Smith #include <petscsys.h> 1481eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1482eca87e8dSBarry Smith 1483d382aafbSBarry Smith Not Collective 1484d382aafbSBarry Smith 1485d382aafbSBarry Smith Input Parameters: 148616a05f60SBarry Smith + a - pointer to first element to fetch (any type but usually `PetscInt` or `PetscScalar`) 1487d382aafbSBarry Smith . n - number of elements to fetch 1488d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 148950d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1490d382aafbSBarry Smith 1491d382aafbSBarry Smith Level: developer 1492d382aafbSBarry Smith 1493d382aafbSBarry Smith Notes: 149416a05f60SBarry Smith The last two arguments (`rw` and `t`) must be compile-time constants. 1495d382aafbSBarry Smith 149650d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 149750d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 149887497f52SBarry Smith + `PETSC_PREFETCH_HINT_NTA` - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 149987497f52SBarry Smith . `PETSC_PREFETCH_HINT_T0` - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 150087497f52SBarry Smith . `PETSC_PREFETCH_HINT_T1` - Fetch to level 2 and higher (not L1). 150187497f52SBarry Smith - `PETSC_PREFETCH_HINT_T2` - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1502d382aafbSBarry Smith 1503d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1504d382aafbSBarry Smith address). 1505d382aafbSBarry Smith 1506d382aafbSBarry Smith M*/ 15079371c9d4SSatish Balay #define PetscPrefetchBlock(a, n, rw, t) \ 15089371c9d4SSatish Balay do { \ 1509d382aafbSBarry Smith const char *_p = (const char *)(a), *_end = (const char *)((a) + (n)); \ 1510d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p, (rw), (t)); \ 1511d382aafbSBarry Smith } while (0) 1512447bcd8fSJacob Faibussowitsch #endif 1513d382aafbSBarry Smith /* 1514d382aafbSBarry Smith Determine if some of the kernel computation routines use 1515d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1516d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1517d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1518e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1519d382aafbSBarry Smith */ 1520d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1521d382aafbSBarry Smith 1522d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1523d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1524d382aafbSBarry Smith #endif 1525d382aafbSBarry Smith 1526d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1527d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1528d382aafbSBarry Smith #endif 1529d382aafbSBarry Smith 1530d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1531d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1532d382aafbSBarry Smith #endif 1533d382aafbSBarry Smith 1534d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1535d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1536d382aafbSBarry Smith #endif 1537d382aafbSBarry Smith 1538d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1539d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1540d382aafbSBarry Smith #endif 1541d382aafbSBarry Smith 1542d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1543d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1544d382aafbSBarry Smith #endif 1545d382aafbSBarry Smith 1546d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1547d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1548d382aafbSBarry Smith #endif 1549d382aafbSBarry Smith 1550d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1551d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1552d382aafbSBarry Smith #endif 1553d382aafbSBarry Smith 1554d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1555d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1556d382aafbSBarry Smith #endif 1557d382aafbSBarry Smith 1558d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1559d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1560d382aafbSBarry Smith #endif 1561d382aafbSBarry Smith 1562d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1563d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1564d382aafbSBarry Smith #endif 1565d382aafbSBarry Smith 1566d382aafbSBarry Smith #endif 1567d382aafbSBarry Smith 1568d382aafbSBarry Smith /* 1569d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1570d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1571d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1572d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1573d382aafbSBarry Smith ugly extern "C" {} wrappers. 1574d382aafbSBarry Smith */ 1575d382aafbSBarry Smith #if defined(__cplusplus) 1576d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1577d382aafbSBarry Smith #define EXTERN_C_END } 1578d382aafbSBarry Smith #else 1579d382aafbSBarry Smith #define EXTERN_C_BEGIN 1580d382aafbSBarry Smith #define EXTERN_C_END 1581d382aafbSBarry Smith #endif 1582d382aafbSBarry Smith 1583d382aafbSBarry Smith /*MC 1584d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1585d382aafbSBarry Smith communication 1586d382aafbSBarry Smith 1587d382aafbSBarry Smith Level: beginner 1588d382aafbSBarry Smith 158916a05f60SBarry Smith Note: 159016a05f60SBarry Smith This manual page is a place-holder because MPICH does not have a manual page for `MPI_Comm` 1591d382aafbSBarry Smith 1592db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`, `PETSC_COMM_SELF` 1593d382aafbSBarry Smith M*/ 1594d382aafbSBarry Smith 1595d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 159693d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 159793d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 159893d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 159993d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 160093d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 160193d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 1602d382aafbSBarry Smith #endif 1603d382aafbSBarry Smith 160461b0d812SBarry Smith /*@C 16057de69702SBarry Smith PetscIntCast - casts a `PetscInt64` (which is 64 bits in size) to a `PetscInt` (which may be 32-bits in size), generates an 160687497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1607c73702f5SBarry Smith 160820f4b53cSBarry Smith Not Collective; No Fortran Support 1609c73702f5SBarry Smith 1610c73702f5SBarry Smith Input Parameter: 161187497f52SBarry Smith . a - the `PetscInt64` value 1612c73702f5SBarry Smith 1613c73702f5SBarry Smith Output Parameter: 161487497f52SBarry Smith . b - the resulting `PetscInt` value 1615c73702f5SBarry Smith 1616c73702f5SBarry Smith Level: advanced 1617c73702f5SBarry Smith 161895bd0b28SBarry Smith Note: 16197de69702SBarry Smith If integers needed for the applications are too large to fit in 32-bit ints you can ./configure using `--with-64-bit-indices` to make `PetscInt` use 64-bit integers 1620c73702f5SBarry Smith 1621db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()` 1622c73702f5SBarry Smith @*/ 1623d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntCast(PetscInt64 a, PetscInt *b) 1624d71ae5a4SJacob Faibussowitsch { 1625c73702f5SBarry Smith PetscFunctionBegin; 1626f3fa974cSJacob Faibussowitsch // if using 64-bit indices already then this comparison is tautologically true 1627f3fa974cSJacob Faibussowitsch PetscCheck(a < PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 1628377f809aSBarry Smith if (b) *b = (PetscInt)a; 16293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1630c73702f5SBarry Smith } 1631c73702f5SBarry Smith 1632c73702f5SBarry Smith /*@C 16337de69702SBarry Smith PetscCountCast - casts a `PetscCount` to a `PetscInt` (which may be 32-bits in size), generates an 163487497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1635981bb840SJunchao Zhang 1636667f096bSBarry Smith Not Collective; No Fortran Support 1637981bb840SJunchao Zhang 1638981bb840SJunchao Zhang Input Parameter: 163987497f52SBarry Smith . a - the `PetscCount` value 1640981bb840SJunchao Zhang 1641981bb840SJunchao Zhang Output Parameter: 164287497f52SBarry Smith . b - the resulting `PetscInt` value 1643981bb840SJunchao Zhang 1644981bb840SJunchao Zhang Level: advanced 1645981bb840SJunchao Zhang 1646667f096bSBarry Smith Note: 16477de69702SBarry Smith If integers needed for the applications are too large to fit in 32-bit integers you can ./configure using `--with-64-bit-indices` to make `PetscInt` use 64-bit integers 1648981bb840SJunchao Zhang 1649667f096bSBarry Smith .seealso: `PetscCount`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`, `PetscIntCast()` 1650981bb840SJunchao Zhang @*/ 1651d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCountCast(PetscCount a, PetscInt *b) 1652d71ae5a4SJacob Faibussowitsch { 1653981bb840SJunchao Zhang PetscFunctionBegin; 1654981bb840SJunchao Zhang *b = 0; 1655f3fa974cSJacob Faibussowitsch PetscCheck(sizeof(PetscCount) <= sizeof(PetscInt) || a <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 1656f3fa974cSJacob Faibussowitsch *b = (PetscInt)a; 16573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1658981bb840SJunchao Zhang } 1659981bb840SJunchao Zhang 1660981bb840SJunchao Zhang /*@C 16617de69702SBarry Smith PetscBLASIntCast - casts a `PetscInt` (which may be 64-bits in size) to a `PetscBLASInt` (which may be 32-bits in size), generates an 166287497f52SBarry Smith error if the `PetscBLASInt` is not large enough to hold the number. 166361b0d812SBarry Smith 1664667f096bSBarry Smith Not Collective; No Fortran Support 166561b0d812SBarry Smith 166661b0d812SBarry Smith Input Parameter: 166787497f52SBarry Smith . a - the `PetscInt` value 166861b0d812SBarry Smith 166961b0d812SBarry Smith Output Parameter: 167087497f52SBarry Smith . b - the resulting `PetscBLASInt` value 167161b0d812SBarry Smith 167261b0d812SBarry Smith Level: advanced 167361b0d812SBarry Smith 1674667f096bSBarry Smith Note: 1675f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 16761fd49c25SBarry Smith 1677db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscIntCast()`, `PetscCountCast()` 167861b0d812SBarry Smith @*/ 1679d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscBLASIntCast(PetscInt a, PetscBLASInt *b) 1680d71ae5a4SJacob Faibussowitsch { 1681c5df96a5SBarry Smith PetscFunctionBegin; 168254c59aa7SJacob Faibussowitsch *b = 0; 168354c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) { 16847de69702SBarry Smith PetscCheck(a <= PETSC_BLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32-bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running", a); 168554c59aa7SJacob Faibussowitsch } 168654c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to BLAS/LAPACK routine"); 1687f3fa974cSJacob Faibussowitsch *b = (PetscBLASInt)a; 16883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1689c5df96a5SBarry Smith } 1690c5df96a5SBarry Smith 169161b0d812SBarry Smith /*@C 169287497f52SBarry Smith PetscCuBLASIntCast - like `PetscBLASIntCast()`, but for `PetscCuBLASInt`. 1693eee0c0a6SToby Isaac 1694667f096bSBarry Smith Not Collective; No Fortran Support 1695eee0c0a6SToby Isaac 1696eee0c0a6SToby Isaac Input Parameter: 169787497f52SBarry Smith . a - the `PetscInt` value 1698eee0c0a6SToby Isaac 1699eee0c0a6SToby Isaac Output Parameter: 170087497f52SBarry Smith . b - the resulting `PetscCuBLASInt` value 1701eee0c0a6SToby Isaac 1702eee0c0a6SToby Isaac Level: advanced 1703eee0c0a6SToby Isaac 1704667f096bSBarry Smith Note: 1705eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 1706eee0c0a6SToby Isaac 1707db781477SPatrick Sanan .seealso: `PetscCuBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 1708eee0c0a6SToby Isaac @*/ 1709d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a, PetscCuBLASInt *b) 1710d71ae5a4SJacob Faibussowitsch { 1711eee0c0a6SToby Isaac PetscFunctionBegin; 171254c59aa7SJacob Faibussowitsch *b = 0; 17137de69702SBarry Smith PetscCheck(a <= PETSC_CUBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32-bit integers.", a); 1714f3fa974cSJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer %" PetscInt_FMT "to cuBLAS routine", a); 1715f3fa974cSJacob Faibussowitsch *b = (PetscCuBLASInt)a; 17163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1717eee0c0a6SToby Isaac } 1718eee0c0a6SToby Isaac 1719eee0c0a6SToby Isaac /*@C 172047d993e7Ssuyashtn PetscHipBLASIntCast - like `PetscBLASIntCast()`, but for `PetscHipBLASInt`. 172147d993e7Ssuyashtn 1722667f096bSBarry Smith Not Collective; No Fortran Support 172347d993e7Ssuyashtn 172447d993e7Ssuyashtn Input Parameter: 172547d993e7Ssuyashtn . a - the `PetscInt` value 172647d993e7Ssuyashtn 172747d993e7Ssuyashtn Output Parameter: 172847d993e7Ssuyashtn . b - the resulting `PetscHipBLASInt` value 172947d993e7Ssuyashtn 173047d993e7Ssuyashtn Level: advanced 173147d993e7Ssuyashtn 1732667f096bSBarry Smith Note: 173347d993e7Ssuyashtn Errors if the integer is negative since PETSc calls to hipBLAS and friends never need to cast negative integer inputs 173447d993e7Ssuyashtn 173547d993e7Ssuyashtn .seealso: `PetscHipBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 173647d993e7Ssuyashtn @*/ 173747d993e7Ssuyashtn static inline PetscErrorCode PetscHipBLASIntCast(PetscInt a, PetscHipBLASInt *b) 173847d993e7Ssuyashtn { 173947d993e7Ssuyashtn PetscFunctionBegin; 174047d993e7Ssuyashtn *b = 0; 17417de69702SBarry Smith PetscCheck(a <= PETSC_HIPBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for hipBLAS, which is restricted to 32-bit integers.", a); 1742f3fa974cSJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer %" PetscInt_FMT "to hipBLAS routine", a); 1743f3fa974cSJacob Faibussowitsch *b = (PetscHipBLASInt)a; 17443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 174547d993e7Ssuyashtn } 174647d993e7Ssuyashtn 174747d993e7Ssuyashtn /*@C 1748af27ebaaSBarry Smith PetscMPIIntCast - casts a `PetscInt` (which may be 64-bits in size) to a `PetscMPIInt` (which may be 32-bits in size), generates an 1749667f096bSBarry Smith error if the `PetscMPIInt` is not large enough to hold the number. 175061b0d812SBarry Smith 1751667f096bSBarry Smith Not Collective; No Fortran Support 175261b0d812SBarry Smith 175361b0d812SBarry Smith Input Parameter: 175487497f52SBarry Smith . a - the `PetscInt` value 175561b0d812SBarry Smith 175661b0d812SBarry Smith Output Parameter: 175787497f52SBarry Smith . b - the resulting `PetscMPIInt` value 175861b0d812SBarry Smith 175961b0d812SBarry Smith Level: advanced 176061b0d812SBarry Smith 1761db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntCast()` 176261b0d812SBarry Smith @*/ 1763d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMPIIntCast(PetscInt a, PetscMPIInt *b) 1764d71ae5a4SJacob Faibussowitsch { 17654dc2109aSBarry Smith PetscFunctionBegin; 176654c59aa7SJacob Faibussowitsch *b = 0; 1767f3fa974cSJacob Faibussowitsch PetscCheck(a <= PETSC_MPI_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for MPI buffer length. Maximum supported value is %d", a, PETSC_MPI_INT_MAX); 1768f3fa974cSJacob Faibussowitsch *b = (PetscMPIInt)a; 17693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17704dc2109aSBarry Smith } 17714dc2109aSBarry Smith 1772f3fa974cSJacob Faibussowitsch #define PetscInt64Mult(a, b) (((PetscInt64)(a)) * ((PetscInt64)(b))) 17732f18eb33SBarry Smith 17742f18eb33SBarry Smith /*@C 1775f3fa974cSJacob Faibussowitsch PetscRealIntMultTruncate - Computes the product of a positive `PetscReal` and a positive 1776f3fa974cSJacob Faibussowitsch `PetscInt` and truncates the value to slightly less than the maximal possible value. 17772f18eb33SBarry Smith 177820f4b53cSBarry Smith Not Collective; No Fortran Support 17792f18eb33SBarry Smith 1780d8d19677SJose E. Roman Input Parameters: 1781f3fa974cSJacob Faibussowitsch + a - The `PetscReal` value 1782f3fa974cSJacob Faibussowitsch - b - The `PetscInt` value 17832f18eb33SBarry Smith 1784667f096bSBarry Smith Level: advanced 1785667f096bSBarry Smith 1786f3fa974cSJacob Faibussowitsch Notes: 1787f3fa974cSJacob Faibussowitsch Returns the result as a `PetscInt` value. 17882f18eb33SBarry Smith 1789f3fa974cSJacob Faibussowitsch Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64`. 1790667f096bSBarry Smith 1791f3fa974cSJacob Faibussowitsch Use `PetscIntMultTruncate()` to compute the product of two positive `PetscInt` and truncate 1792f3fa974cSJacob Faibussowitsch to fit a `PetscInt`. 1793667f096bSBarry Smith 1794f3fa974cSJacob Faibussowitsch Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an 1795f3fa974cSJacob Faibussowitsch error if the result will not fit in a `PetscInt`. 17962f18eb33SBarry Smith 1797b5e6e808SPierre Jolivet Developer Notes: 1798f3fa974cSJacob Faibussowitsch We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but 1799f3fa974cSJacob Faibussowitsch requires many more checks. 18002f18eb33SBarry Smith 1801f3fa974cSJacob Faibussowitsch This is used where we compute approximate sizes for workspace and need to insure the 1802f3fa974cSJacob Faibussowitsch workspace is index-able. 18031fd49c25SBarry Smith 1804f3fa974cSJacob Faibussowitsch .seealso: `PetscReal`, `PetscInt`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 18052f18eb33SBarry Smith @*/ 1806d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscRealIntMultTruncate(PetscReal a, PetscInt b) 1807d71ae5a4SJacob Faibussowitsch { 18085f80ce2aSJacob Faibussowitsch PetscInt64 r = (PetscInt64)(a * (PetscReal)b); 18092f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 18102f18eb33SBarry Smith return (PetscInt)r; 18112f18eb33SBarry Smith } 18122f18eb33SBarry Smith 18132f18eb33SBarry Smith /*@C 181487497f52SBarry Smith PetscIntMultTruncate - Computes the product of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 18152f18eb33SBarry Smith 1816667f096bSBarry Smith Not Collective; No Fortran Support 18172f18eb33SBarry Smith 1818d8d19677SJose E. Roman Input Parameters: 1819af27ebaaSBarry Smith + a - the `PetscInt` value 18202f18eb33SBarry Smith - b - the second value 18212f18eb33SBarry Smith 1822390e1bf2SBarry Smith Returns: 1823af27ebaaSBarry Smith The result as a `PetscInt` value 18242f18eb33SBarry Smith 1825667f096bSBarry Smith Level: advanced 1826667f096bSBarry Smith 1827667f096bSBarry Smith Notes: 182887497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 1829667f096bSBarry Smith 183087497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 1831667f096bSBarry Smith 183287497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 18332f18eb33SBarry Smith 1834b5e6e808SPierre Jolivet Developer Notes: 183587497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 18362f18eb33SBarry Smith 18372f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 18382f18eb33SBarry Smith 1839667f096bSBarry Smith .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()`, 1840667f096bSBarry Smith `PetscIntSumTruncate()` 18412f18eb33SBarry Smith @*/ 1842d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscIntMultTruncate(PetscInt a, PetscInt b) 1843d71ae5a4SJacob Faibussowitsch { 18445f80ce2aSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 18452f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 18462f18eb33SBarry Smith return (PetscInt)r; 18472f18eb33SBarry Smith } 18482f18eb33SBarry Smith 1849f91af8c7SBarry Smith /*@C 185087497f52SBarry Smith PetscIntSumTruncate - Computes the sum of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 1851f91af8c7SBarry Smith 1852667f096bSBarry Smith Not Collective; No Fortran Support 1853f91af8c7SBarry Smith 1854d8d19677SJose E. Roman Input Parameters: 185587497f52SBarry Smith + a - the `PetscInt` value 1856f91af8c7SBarry Smith - b - the second value 1857f91af8c7SBarry Smith 1858390e1bf2SBarry Smith Returns: 1859af27ebaaSBarry Smith The result as a `PetscInt` value 1860f91af8c7SBarry Smith 1861667f096bSBarry Smith Level: advanced 1862667f096bSBarry Smith 1863667f096bSBarry Smith Notes: 186487497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 1865667f096bSBarry Smith 186687497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 1867667f096bSBarry Smith 186887497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 1869f91af8c7SBarry Smith 1870b5e6e808SPierre Jolivet Developer Note: 1871f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 1872f91af8c7SBarry Smith 1873db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 1874f91af8c7SBarry Smith @*/ 1875d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscIntSumTruncate(PetscInt a, PetscInt b) 1876d71ae5a4SJacob Faibussowitsch { 18775f80ce2aSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 1878f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 1879f91af8c7SBarry Smith return (PetscInt)r; 1880f91af8c7SBarry Smith } 1881f91af8c7SBarry Smith 18822f18eb33SBarry Smith /*@C 188387497f52SBarry Smith PetscIntMultError - Computes the product of two positive `PetscInt` and generates an error with overflow. 18842f18eb33SBarry Smith 1885667f096bSBarry Smith Not Collective; No Fortran Support 18862f18eb33SBarry Smith 1887d8d19677SJose E. Roman Input Parameters: 188887497f52SBarry Smith + a - the `PetscInt` value 18892f18eb33SBarry Smith - b - the second value 18902f18eb33SBarry Smith 1891d8d19677SJose E. Roman Output Parameter: 189216a05f60SBarry Smith . result - the result as a `PetscInt` value, or `NULL` if you do not want the result, you just want to check if it overflows 18932f18eb33SBarry Smith 1894667f096bSBarry Smith Level: advanced 18952f18eb33SBarry Smith 1896667f096bSBarry Smith Notes: 1897667f096bSBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` and store in a `PetscInt64` 1898667f096bSBarry Smith 1899667f096bSBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 1900f5f57ec0SBarry Smith 1901b5e6e808SPierre Jolivet Developer Note: 190216a05f60SBarry Smith In most places in the source code we currently assume that `PetscInt` addition does not overflow, this is obviously wrong but requires many more checks. 190316a05f60SBarry Smith `PetscIntSumError()` can be used to check for this situation. 19042f18eb33SBarry Smith 1905db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntMult64()`, `PetscIntSumError()` 19062f18eb33SBarry Smith @*/ 1907d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntMultError(PetscInt a, PetscInt b, PetscInt *result) 1908d71ae5a4SJacob Faibussowitsch { 1909f3fa974cSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 19102f18eb33SBarry Smith 19112f18eb33SBarry Smith PetscFunctionBegin; 1912c72d0b4cSJacob Faibussowitsch if (result) *result = (PetscInt)r; 1913f3fa974cSJacob Faibussowitsch if (!PetscDefined(USE_64BIT_INDICES)) { 1914f3fa974cSJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Product of two integers %" PetscInt_FMT " %" PetscInt_FMT " overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 1915f3fa974cSJacob Faibussowitsch } 19163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1917f91af8c7SBarry Smith } 1918f91af8c7SBarry Smith 1919f91af8c7SBarry Smith /*@C 1920f91af8c7SBarry Smith 192187497f52SBarry Smith PetscIntSumError - Computes the sum of two positive `PetscInt` and generates an error with overflow. 1922f91af8c7SBarry Smith 1923667f096bSBarry Smith Not Collective; No Fortran Support 1924f91af8c7SBarry Smith 1925d8d19677SJose E. Roman Input Parameters: 192687497f52SBarry Smith + a - the `PetscInt` value 1927f91af8c7SBarry Smith - b - the second value 1928f91af8c7SBarry Smith 1929d8d19677SJose E. Roman Output Parameter: 193016a05f60SBarry Smith . c - the result as a `PetscInt` value, or `NULL` if you do not want the result, you just want to check if it overflows 1931f91af8c7SBarry Smith 1932f91af8c7SBarry Smith Level: advanced 1933f91af8c7SBarry Smith 1934667f096bSBarry Smith Notes: 19357de69702SBarry Smith Use `PetscInt64Mult()` to compute the product of two 32-bit `PetscInt` and store in a `PetscInt64` 1936667f096bSBarry Smith 1937667f096bSBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 1938667f096bSBarry Smith 1939db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 1940f91af8c7SBarry Smith @*/ 1941d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntSumError(PetscInt a, PetscInt b, PetscInt *result) 1942d71ae5a4SJacob Faibussowitsch { 1943f3fa974cSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 1944f91af8c7SBarry Smith 1945f91af8c7SBarry Smith PetscFunctionBegin; 1946c72d0b4cSJacob Faibussowitsch if (result) *result = (PetscInt)r; 1947f3fa974cSJacob Faibussowitsch if (!PetscDefined(USE_64BIT_INDICES)) { 1948f3fa974cSJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Sum of two integers %" PetscInt_FMT " %" PetscInt_FMT " overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 1949f3fa974cSJacob Faibussowitsch } 19503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19512f18eb33SBarry Smith } 1952c5df96a5SBarry Smith 1953d382aafbSBarry Smith /* 19542981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 1955d382aafbSBarry Smith */ 1956d382aafbSBarry Smith #if defined(hz) 1957d382aafbSBarry Smith #undef hz 1958d382aafbSBarry Smith #endif 1959d382aafbSBarry Smith 1960d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 1961d382aafbSBarry Smith #include <sys/types.h> 1962d382aafbSBarry Smith #endif 1963d382aafbSBarry Smith 1964d382aafbSBarry Smith /*MC 1965d382aafbSBarry Smith 196666d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 196716a05f60SBarry Smith and Fortran compilers when `petscsys.h` is included. 196866d79e26SBarry Smith 1969baca6076SPierre Jolivet The current PETSc version and the API for accessing it are defined in <A HREF="PETSC_DOC_OUT_ROOT_PLACEHOLDER/include/petscversion.h.html">include/petscversion.html</A> 197066d79e26SBarry Smith 197166d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 197266d79e26SBarry Smith 197366d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 197466d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 197566d79e26SBarry Smith 197666d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 197766d79e26SBarry Smith 197866d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 197966d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 198066d79e26SBarry Smith version number (x.y.z). 198166d79e26SBarry Smith 198287497f52SBarry Smith `PETSC_RELEASE_DATE` is the date the x.y version was released (i.e. the version before any patch releases) 198366d79e26SBarry Smith 198487497f52SBarry Smith `PETSC_VERSION_DATE` is the date the x.y.z version was released 198566d79e26SBarry Smith 198687497f52SBarry Smith `PETSC_VERSION_GIT` is the last git commit to the repository given in the form vx.y.z-wwwww 198766d79e26SBarry Smith 198887497f52SBarry Smith `PETSC_VERSION_DATE_GIT` is the date of the last git commit to the repository 198966d79e26SBarry Smith 199087497f52SBarry Smith `PETSC_VERSION_()` is deprecated and will eventually be removed. 199166d79e26SBarry Smith 1992cbc12506SBarry Smith Level: intermediate 199366d79e26SBarry Smith M*/ 199466d79e26SBarry Smith 1995014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[], size_t); 1996014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[], size_t); 1997014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[], size_t); 1998014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[], size_t); 1999014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2000014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[], size_t); 200127710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 20025f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt *, PetscInt *, PetscInt *, PetscInt *); 2003d382aafbSBarry Smith 20046a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt, const PetscInt[], PetscBool *); 200562e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortedInt64(PetscInt, const PetscInt64[], PetscBool *); 20066a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt, const PetscMPIInt[], PetscBool *); 20076a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt, const PetscReal[], PetscBool *); 2008014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt, PetscInt[]); 200962e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortInt64(PetscInt, PetscInt64[]); 201062e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortCount(PetscInt, PetscCount[]); 2011ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt, PetscInt[]); 201222ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt *, PetscInt[]); 2013b6a18d21SVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 2014014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt *, PetscInt[]); 2015f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 201660e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt *); 2017d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt *); 2018014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt, const PetscInt[], PetscInt[]); 2019014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt, const char *[], PetscInt[]); 2020014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt, PetscInt[], PetscInt[]); 2021981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount, PetscInt[], PetscCount[]); 20226c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt, PetscInt[], PetscInt[], PetscInt[]); 2023981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount, PetscInt[], PetscInt[], PetscCount[]); 202417d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt, PetscMPIInt[]); 202517d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt *, PetscMPIInt[]); 2026014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt, PetscMPIInt[], PetscMPIInt[]); 20275569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt, PetscMPIInt[], PetscInt[]); 2028014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt, PetscInt[], PetscScalar[]); 202917df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt, PetscInt[], void *, size_t, void *); 2030014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt, PetscReal[]); 203139f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2032014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt, const PetscReal[], PetscInt[]); 2033745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt *, PetscReal[]); 203439f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal, PetscInt, const PetscReal[], PetscReal, PetscInt *); 2035014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt, PetscInt, PetscScalar[], PetscInt[]); 2036014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt, PetscInt, PetscReal[], PetscInt[]); 2037014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt, const PetscBool[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **, PetscInt **, PetscInt **); 20386c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt, const PetscInt[], const PetscInt[], PetscInt, const PetscInt[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **); 20396c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscInt *, PetscInt **); 2040e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt, const PetscMPIInt[], PetscInt, const PetscMPIInt[], PetscInt *, PetscMPIInt **); 2041ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2042ce605777SToby Isaac 20434d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt, void *, size_t, int (*)(const void *, const void *, void *), void *); 2044676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt, PetscInt[]); 2045676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt, PetscMPIInt[]); 2046676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt, PetscReal[]); 20474d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt, void *, size_t, void *, size_t, int (*)(const void *, const void *, void *), void *); 2048676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt, PetscInt[], PetscInt[]); 2049676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt, PetscMPIInt[], PetscMPIInt[]); 2050676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2051676f2a66SJacob Faibussowitsch 2052014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2053014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[], size_t); 2054d382aafbSBarry Smith 205576bdecfbSBarry Smith /*J 2056d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2057d382aafbSBarry Smith 2058d382aafbSBarry Smith Level: beginner 2059d382aafbSBarry Smith 2060667f096bSBarry Smith Note: 206187497f52SBarry Smith To use `PETSCSPRNG` or `PETSCRANDOM123` you must have ./configure PETSc 206216a05f60SBarry Smith with the option `--download-sprng` or `--download-random123`. We recommend the default provided with PETSc. 2063d382aafbSBarry Smith 2064db781477SPatrick Sanan .seealso: `PetscRandomSetType()`, `PetscRandom`, `PetscRandomCreate()` 206576bdecfbSBarry Smith J*/ 206619fd82e9SBarry Smith typedef const char *PetscRandomType; 2067d382aafbSBarry Smith #define PETSCRAND "rand" 2068d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2069d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2070c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 207125ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2072808ba619SStefano Zampini #define PETSCCURAND "curand" 2073d382aafbSBarry Smith 2074d382aafbSBarry Smith /* Logging support */ 2075014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2076d382aafbSBarry Smith 2077607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 20784bf303faSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRandomFinalizePackage(void); 2079d382aafbSBarry Smith 2080d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2081140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2082d382aafbSBarry Smith 2083bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[], PetscErrorCode (*)(PetscRandom)); 208419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2085014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 208619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType *); 2087fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom, PetscObject, const char[]); 2088014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom, PetscViewer); 2089d382aafbSBarry Smith 2090014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm, PetscRandom *); 2091014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom, PetscScalar *); 2092014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom, PetscReal *); 2093808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom, PetscInt, PetscScalar *); 2094808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom, PetscInt, PetscReal *); 2095014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom, PetscScalar *, PetscScalar *); 2096014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom, PetscScalar, PetscScalar); 2097014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom, unsigned long); 2098014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom, unsigned long *); 2099014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2100014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom *); 2101d382aafbSBarry Smith 2102014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[], char[], size_t); 2103014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[], char[], size_t); 2104014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[], size_t); 2105014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[], char[]); 2106014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[], size_t); 2107014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[], char, PetscBool *); 2108014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[], char, PetscBool *); 210997540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 21108a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 211197540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2112d382aafbSBarry Smith 2113d598313aSBarry Smith /*MC 2114d598313aSBarry Smith PetscBinaryBigEndian - indicates if values in memory are stored with big endian format 2115d598313aSBarry Smith 2116d598313aSBarry Smith Synopsis: 2117d598313aSBarry Smith #include <petscsys.h> 2118d598313aSBarry Smith PetscBool PetscBinaryBigEndian(void); 2119d598313aSBarry Smith 2120d598313aSBarry Smith No Fortran Support 2121d598313aSBarry Smith 2122d598313aSBarry Smith Level: developer 2123d598313aSBarry Smith 2124d598313aSBarry Smith .seealso: `PetscInitialize()`, `PetscFinalize()`, `PetscInitializeCalled` 2125d598313aSBarry Smith M*/ 2126d71ae5a4SJacob Faibussowitsch static inline PetscBool PetscBinaryBigEndian(void) 2127d71ae5a4SJacob Faibussowitsch { 21289371c9d4SSatish Balay long _petsc_v = 1; 21299371c9d4SSatish Balay return ((char *)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE; 21309371c9d4SSatish Balay } 213130815ce0SLisandro Dalcin 21329860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int, void *, PetscInt, PetscInt *, PetscDataType); 21339860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm, int, void *, PetscInt, PetscInt *, PetscDataType); 2134f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int, const void *, PetscInt, PetscDataType); 2135f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm, int, const void *, PetscInt, PetscDataType); 2136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[], PetscFileMode, int *); 2137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm, PetscBool *); 2139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm, PetscBool *); 2140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm, char[], size_t); 2141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm, const char[], char[], size_t, PetscBool *); 2142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm, const char[], char[], size_t, PetscBool *); 2143c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2144e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[], int, int *); 2145c891a504SStefano Zampini #endif 2146d382aafbSBarry Smith 2147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int, off_t, PetscBinarySeekType, off_t *); 2148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm, int, off_t, PetscBinarySeekType, off_t *); 2149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *, PetscDataType, PetscInt); 2150d382aafbSBarry Smith 2151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[], PetscBool); 2153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char *); 2155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 21572a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2158d382aafbSBarry Smith 2159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt *); 2160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **); 2161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **, PetscMPIInt **); 2162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscInt ***, MPI_Request **); 2163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscScalar ***, MPI_Request **); 216493d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt *, const void *, PetscMPIInt *, PetscMPIInt **, void *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 216593d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 216693d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, MPI_Request **, MPI_Request **, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 2167d382aafbSBarry Smith 21686145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm, PetscBuildTwoSidedType); 21696145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm, PetscBuildTwoSidedType *); 21706145cd65SJed Brown 2171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm, PetscBool *, PetscBool *); 2172d382aafbSBarry Smith 2173ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2174ce94432eSBarry Smith 2175d382aafbSBarry Smith struct _n_PetscSubcomm { 2176d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2177d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2178306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 217945487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 218045487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2181708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 218245487dadSJed Brown PetscSubcommType type; 2183e5acf8a4SHong Zhang char *subcommprefix; 2184d382aafbSBarry Smith }; 2185d382aafbSBarry Smith 2186d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) 2187d71ae5a4SJacob Faibussowitsch { 21889371c9d4SSatish Balay return scomm->parent; 21899371c9d4SSatish Balay } 2190d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) 2191d71ae5a4SJacob Faibussowitsch { 21929371c9d4SSatish Balay return scomm->child; 21939371c9d4SSatish Balay } 2194d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) 2195d71ae5a4SJacob Faibussowitsch { 21969371c9d4SSatish Balay return scomm->dupparent; 21979371c9d4SSatish Balay } 2198014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm, PetscSubcomm *); 2199014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm *); 2200014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm, PetscInt); 2201014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm, PetscSubcommType); 220265d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm, PetscMPIInt, PetscMPIInt); 2203053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm, PetscViewer); 2204f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2205e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm, const char[]); 2206a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm, MPI_Comm *); 2207a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm, MPI_Comm *); 2208a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm, MPI_Comm *); 2209d382aafbSBarry Smith 22109962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt, PetscHeap *); 22119962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap, PetscInt, PetscInt); 22129962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap, PetscInt *, PetscInt *); 22139962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap, PetscInt *, PetscInt *); 22149962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap, PetscInt, PetscInt); 22159962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 22169962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap *); 22179962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap, PetscViewer); 22189962606eSBarry Smith 22195e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 22205f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm, PetscShmComm *); 22215f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 22225f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 22235f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm, MPI_Comm *); 22245e71baefSBarry Smith 2225a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2226a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm, PetscInt, PetscOmpCtrl *); 2227a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl, MPI_Comm *, MPI_Comm *, PetscBool *); 2228a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl *); 2229a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2230a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2231a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2232a32e93adSJunchao Zhang 223313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t, size_t, PetscSegBuffer *); 22340f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer *); 223513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer, size_t, void *); 2236137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer, void *); 2237137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer, void *); 2238137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer, void *); 223913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer, size_t *); 224013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer, size_t); 22410f453b92SJed Brown 2242d598313aSBarry Smith /*MC 2243d598313aSBarry Smith PetscSegBufferGetInts - access an array of `PetscInt` from a `PetscSegBuffer` 2244d598313aSBarry Smith 2245d598313aSBarry Smith Synopsis: 2246d598313aSBarry Smith #include <petscsys.h> 2247d598313aSBarry Smith PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg, size_t count, PetscInt *PETSC_RESTRICT *slot); 2248d598313aSBarry Smith 2249d598313aSBarry Smith No Fortran Support 2250d598313aSBarry Smith 2251d598313aSBarry Smith Input Parameters: 2252d598313aSBarry Smith + seg - `PetscSegBuffer` buffer 2253d598313aSBarry Smith - count - number of entries needed 2254d598313aSBarry Smith 2255d598313aSBarry Smith Output Parameter: 2256d598313aSBarry Smith . buf - address of new buffer for contiguous data 2257d598313aSBarry Smith 2258d598313aSBarry Smith Level: intermediate 2259d598313aSBarry Smith 2260d598313aSBarry Smith Developer Note: 2261d598313aSBarry Smith Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2262d598313aSBarry Smith prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2263d598313aSBarry Smith possible. 2264d598313aSBarry Smith 2265d598313aSBarry Smith .seealso: `PetscSegBuffer`, `PetscSegBufferGet()`, `PetscInitialize()`, `PetscFinalize()`, `PetscInitializeCalled` 2266d598313aSBarry Smith M*/ 2267d598313aSBarry Smith /* */ 2268d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg, size_t count, PetscInt *PETSC_RESTRICT *slot) 2269d71ae5a4SJacob Faibussowitsch { 22709371c9d4SSatish Balay return PetscSegBufferGet(seg, count, (void **)slot); 22719371c9d4SSatish Balay } 2272d382aafbSBarry Smith 22739de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 22749de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted *); 22759de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted *); 22769de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted, const char *, const char *, PetscBool *); 22779de0f6ecSBarry Smith 2278ace2fbaeSBarry Smith #include <stdarg.h> 2279ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char *, size_t, const char[], size_t *, va_list); 2280ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE *, const char[], va_list); 2281ace2fbaeSBarry Smith 2282268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2283fbfcfee5SBarry Smith 22845d83a8b1SBarry Smith /*@ 22851f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 22861f817a21SBarry Smith 2287667f096bSBarry Smith Not Collective; No Fortran Support 22881f817a21SBarry Smith 22891f817a21SBarry Smith Input Parameters: 229035cb6cd3SPierre Jolivet + cite - the bibtex item, formatted to displayed on multiple lines nicely 229187497f52SBarry Smith - set - a boolean variable initially set to `PETSC_FALSE`; this is used to insure only a single registration of the citation 22921f817a21SBarry Smith 2293667f096bSBarry Smith Options Database Key: 22943c7db156SBarry Smith . -citations [filename] - print out the bibtex entries for the given computation 22953c7db156SBarry Smith 2296850545d0SSatish Balay Level: intermediate 22971f817a21SBarry Smith @*/ 2298d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCitationsRegister(const char cit[], PetscBool *set) 2299d71ae5a4SJacob Faibussowitsch { 2300dff31646SBarry Smith size_t len; 2301dff31646SBarry Smith char *vstring; 2302dff31646SBarry Smith 23031f817a21SBarry Smith PetscFunctionBegin; 23043ba16761SJacob Faibussowitsch if (set && *set) PetscFunctionReturn(PETSC_SUCCESS); 23059566063dSJacob Faibussowitsch PetscCall(PetscStrlen(cit, &len)); 23069566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(PetscCitationsList, len, &vstring)); 23079566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(vstring, cit, len)); 2308dff31646SBarry Smith if (set) *set = PETSC_TRUE; 23093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2310dff31646SBarry Smith } 2311dff31646SBarry Smith 2312fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm, char[], char[], size_t); 2313fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm, const char[], char[], size_t); 2314f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm, const char[], const char[]); 2315fe278a28SBarry Smith 2316f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm, char[], char[], size_t); 2317f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm, const char[], char[], char[], size_t); 23184bf303faSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscBoxUpload(MPI_Comm, const char[], const char[]); 2319b967cddfSBarry Smith 23209f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm, const char[], char[], size_t); 23214bf303faSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscGlobusAuthorize(MPI_Comm, char[], size_t); 23224bf303faSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscGlobusUpload(MPI_Comm, const char[], const char[]); 23239f4d3c52SBarry Smith 232468e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[], const char[], char[], size_t, PetscBool *); 23255dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[], const char[], const char[], size_t); 2326dff31646SBarry Smith 2327b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2328d71ae5a4SJacob Faibussowitsch static inline unsigned int PetscStrHash(const char *str) 2329d71ae5a4SJacob Faibussowitsch { 2330df05ca09SBarry Smith unsigned int c, hash = 5381; 2331df05ca09SBarry Smith 2332503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2333df05ca09SBarry Smith return hash; 2334df05ca09SBarry Smith } 233577a5e07dSBarry Smith 233677a5e07dSBarry Smith /*MC 233787497f52SBarry Smith MPIU_Allreduce - a PETSc replacement for `MPI_Allreduce()` that tries to determine if the call from all the MPI ranks occur from the 233887497f52SBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI ranks follow different code paths 233987497f52SBarry Smith resulting in inconsistent and incorrect calls to `MPI_Allreduce()`. 234077a5e07dSBarry Smith 234177a5e07dSBarry Smith Synopsis: 234277a5e07dSBarry Smith #include <petscsys.h> 234377a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 234477a5e07dSBarry Smith 23457cdbe19fSJose E. Roman Collective 23467cdbe19fSJose E. Roman 234777a5e07dSBarry Smith Input Parameters: 2348df05ca09SBarry Smith + a - pointer to the input data to be reduced 2349df05ca09SBarry Smith . c - the number of MPI data items in a and b 235087497f52SBarry Smith . d - the MPI datatype, for example `MPI_INT` 235187497f52SBarry Smith . e - the MPI operation, for example `MPI_SUM` 2352df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 235377a5e07dSBarry Smith 235477a5e07dSBarry Smith Output Parameter: 2355df05ca09SBarry Smith . b - the reduced values 235677a5e07dSBarry Smith 2357667f096bSBarry Smith Level: developer 2358667f096bSBarry Smith 2359e28ce29aSPatrick Sanan Notes: 236087497f52SBarry Smith In optimized mode this directly calls `MPI_Allreduce()` 236177a5e07dSBarry Smith 2362df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2363df05ca09SBarry Smith 236487497f52SBarry Smith The error code this returns should be checked with `PetscCall()` even though it looks like an MPI function because it always returns PETSc error codes 2365df05ca09SBarry Smith 2366db781477SPatrick Sanan .seealso: `MPI_Allreduce()` 236777a5e07dSBarry Smith M*/ 23689371c9d4SSatish Balay #define MPIU_Allreduce(a, b, c, d, e, fcomm) \ 23693ba16761SJacob Faibussowitsch PetscMacroReturnStandard( \ 23703ba16761SJacob Faibussowitsch PetscMPIInt a_b1[6], a_b2[6]; \ 23713ba16761SJacob Faibussowitsch int _mpiu_allreduce_c_int = (int)(c); \ 23723ba16761SJacob Faibussowitsch a_b1[0] = -(PetscMPIInt)__LINE__; \ 23733ba16761SJacob Faibussowitsch a_b1[1] = -a_b1[0]; \ 23743ba16761SJacob Faibussowitsch a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); \ 23753ba16761SJacob Faibussowitsch a_b1[3] = -a_b1[2]; \ 23763ba16761SJacob Faibussowitsch a_b1[4] = -(PetscMPIInt)(c); \ 23773ba16761SJacob Faibussowitsch a_b1[5] = -a_b1[4]; \ 23783ba16761SJacob Faibussowitsch \ 23793ba16761SJacob Faibussowitsch PetscCallMPI(MPI_Allreduce(a_b1, a_b2, 6, MPI_INT, MPI_MAX, fcomm)); \ 23803ba16761SJacob Faibussowitsch PetscCheck(-a_b2[0] == a_b2[1], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (code lines) on different processors"); \ 23813ba16761SJacob Faibussowitsch PetscCheck(-a_b2[2] == a_b2[3], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (functions) on different processors"); \ 23823ba16761SJacob Faibussowitsch PetscCheck(-a_b2[4] == a_b2[5], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called with different counts %d on different processors", _mpiu_allreduce_c_int); \ 23833ba16761SJacob Faibussowitsch PetscCallMPI(MPI_Allreduce((a), (b), (c), (d), (e), (fcomm)));) 2384b2566f29SBarry Smith #else 2385f3fa974cSJacob Faibussowitsch #define MPIU_Allreduce(a, b, c, d, e, fcomm) PetscMacroReturnStandard(PetscCallMPI(MPI_Allreduce((a), (b), (c), (d), (e), (fcomm)))) 2386b2566f29SBarry Smith #endif 2387b2566f29SBarry Smith 2388b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 23898198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint, PetscMPIInt, MPI_Info, MPI_Comm, void *, MPI_Win *); 23908198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win, PetscMPIInt, MPI_Aint *, PetscMPIInt *, void *); 23912f065d89SBarry Smith #endif 23928198064fSBarry Smith 2393cd88fca5SStefano Zampini /* this is a vile hack */ 2394cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 23959371c9d4SSatish Balay #if !defined(PETSC_NECMPI_VERSION_MAJOR) || !defined(PETSC_NECMPI_VERSION_MINOR) || PETSC_NECMPI_VERSION_MAJOR < 2 || (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2396cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL, 0); 2397cd88fca5SStefano Zampini #endif 2398961fb248SStefano Zampini #endif 2399cd88fca5SStefano Zampini 240012801b39SBarry Smith /* 240160fbe2beSVaclav Hapla List of external packages and queries on it 240260fbe2beSVaclav Hapla */ 240360fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[], PetscBool *); 240460fbe2beSVaclav Hapla 2405f1f2ae84SBarry Smith /* this cannot go here because it may be in a different shared library */ 2406f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerBegin(void); 2407f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerEnd(void); 2408f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPICommsDestroy(void); 24097a99bfcaSBarry Smith PETSC_EXTERN PetscBool PCMPIServerActive; 2410fbf9dbe5SBarry Smith 2411edd03b47SJacob Faibussowitsch #define PETSC_HAVE_FORTRAN PETSC_DEPRECATED_MACRO(3, 20, 0, "PETSC_USE_FORTRAN_BINDINGS", ) PETSC_USE_FORTRAN_BINDINGS 2412046ed546SBarry Smith 2413046ed546SBarry Smith PETSC_EXTERN PetscErrorCode PetscBLASSetNumThreads(PetscInt); 2414046ed546SBarry Smith PETSC_EXTERN PetscErrorCode PetscBLASGetNumThreads(PetscInt *); 24158e3a54c0SPierre Jolivet 24168e3a54c0SPierre Jolivet /*MC 24178e3a54c0SPierre Jolivet PetscSafePointerPlusOffset - Checks that a pointer is not `NULL` before applying an offset 24188e3a54c0SPierre Jolivet 24198e3a54c0SPierre Jolivet Level: beginner 24208e3a54c0SPierre Jolivet 24218e3a54c0SPierre Jolivet Note: 24228e3a54c0SPierre Jolivet This is needed to avoid errors with undefined-behavior sanitizers such as 24238e3a54c0SPierre Jolivet UBSan, assuming PETSc has been configured with `-fsanitize=undefined` as part of the compiler flags 24248e3a54c0SPierre Jolivet M*/ 24258e3a54c0SPierre Jolivet #define PetscSafePointerPlusOffset(ptr, offset) ((ptr) ? (ptr) + (offset) : NULL) 2426