xref: /petsc/include/petscsys.h (revision 17e6345f7ee32f2ec857531988ec52edfcaf4f6d)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
11d382aafbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE
12d382aafbSBarry Smith */
13d382aafbSBarry Smith #include "petscconf.h"
14d382aafbSBarry Smith #include "petscfix.h"
15d382aafbSBarry Smith 
16d382aafbSBarry Smith /* ========================================================================== */
17d382aafbSBarry Smith /*
18d382aafbSBarry Smith    This facilitates using C version of PETSc from C++ and
19e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
20d382aafbSBarry Smith */
21d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
22d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
23d382aafbSBarry Smith #endif
241ec50b02SJed Brown 
251ec50b02SJed Brown #if defined(__cplusplus)
261ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
271ec50b02SJed Brown #else
281ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
291ec50b02SJed Brown #endif
30d382aafbSBarry Smith 
31d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
32d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
33d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
34d382aafbSBarry Smith #else
35d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
36d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
37d382aafbSBarry Smith #endif
38d382aafbSBarry Smith /* ========================================================================== */
39d382aafbSBarry Smith /*
40d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
41d382aafbSBarry Smith     Web page
42d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
43d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
44d382aafbSBarry Smith     src/docs/website/index.html.
45d382aafbSBarry Smith */
46d382aafbSBarry Smith #include "petscversion.h"
47301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
48d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
49301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
50d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
51301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
52d382aafbSBarry Smith #else
53301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
54301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
55d382aafbSBarry Smith #endif
56d382aafbSBarry Smith 
57d382aafbSBarry Smith /*MC
58d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
59d382aafbSBarry Smith 
60d382aafbSBarry Smith     Input Parameter:
61d382aafbSBarry Smith .   len - length of the string
62d382aafbSBarry Smith 
63d382aafbSBarry Smith     Output Parameter:
64d382aafbSBarry Smith .   version - version string
65d382aafbSBarry Smith 
66d382aafbSBarry Smith     Level: developer
67d382aafbSBarry Smith 
68d382aafbSBarry Smith     Usage:
69d382aafbSBarry Smith     char version[256];
70d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
71d382aafbSBarry Smith 
72d382aafbSBarry Smith     Fortran Note:
73d382aafbSBarry Smith     This routine is not supported in Fortran.
74d382aafbSBarry Smith 
75d382aafbSBarry Smith .seealso: PetscGetProgramName()
76d382aafbSBarry Smith 
77d382aafbSBarry Smith M*/
78d382aafbSBarry Smith 
79d382aafbSBarry Smith /* ========================================================================== */
80d382aafbSBarry Smith 
81d382aafbSBarry Smith /*
82d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
83d382aafbSBarry Smith 
84d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
85d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
86d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
87d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
88d382aafbSBarry Smith     mpicxx.h directly in their code
89d382aafbSBarry Smith */
90d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
91d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
92d382aafbSBarry Smith #include "mpi.h"
9365013866SBarry Smith 
94d382aafbSBarry Smith /*
95d382aafbSBarry Smith     Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
96d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
97d382aafbSBarry Smith 
98d382aafbSBarry Smith     The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense.
99d382aafbSBarry Smith */
100d382aafbSBarry Smith #include <stdio.h>
101d382aafbSBarry Smith 
102d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
103d382aafbSBarry Smith #if !defined(MPIAPI)
104d382aafbSBarry Smith #define MPIAPI
105d382aafbSBarry Smith #endif
106d382aafbSBarry Smith 
107b3506946SBarry Smith 
108d382aafbSBarry Smith /*MC
109d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
110d382aafbSBarry Smith 
111d382aafbSBarry Smith     Level: beginner
112d382aafbSBarry Smith 
113d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
114d382aafbSBarry Smith M*/
115d382aafbSBarry Smith typedef int PetscErrorCode;
116d382aafbSBarry Smith 
117d382aafbSBarry Smith /*MC
118d382aafbSBarry Smith 
119503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
120d382aafbSBarry Smith          (internal integer in the data structure used for error
121d382aafbSBarry Smith          checking). These are all defined by an offset from the lowest
1220700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
123d382aafbSBarry Smith 
124d382aafbSBarry Smith     Level: advanced
125d382aafbSBarry Smith 
1260700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
127d382aafbSBarry Smith M*/
1280700a824SBarry Smith typedef int PetscClassId;
129d382aafbSBarry Smith 
130d382aafbSBarry Smith 
131d382aafbSBarry Smith /*MC
132d382aafbSBarry Smith     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
133d382aafbSBarry Smith 
134d382aafbSBarry Smith     Level: intermediate
135d382aafbSBarry Smith 
136d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1373b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
138287e6e24SBarry Smith            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
1393b2a8c54SBarry Smith 
1403b2a8c54SBarry Smith     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1413b2a8c54SBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
1423b2a8c54SBarry Smith 
1433b2a8c54SBarry Smith     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1443b2a8c54SBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
145d382aafbSBarry Smith 
146287e6e24SBarry Smith     Developer Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
147287e6e24SBarry Smith      if you run ./configure with the option
148287e6e24SBarry Smith      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
149287e6e24SBarry Smith      for example, you can change the int below to long int. Since MATLAB uses the MKL (Intel Math Libraries) it is likely one can
150287e6e24SBarry Smith      purchase a 64 bit integer version of the MKL and use that with a  PetscBLASInt of long int.
151287e6e24SBarry Smith 
152287e6e24SBarry Smith      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
153287e6e24SBarry Smith      be used with PETSc if you have set PetscBLASInt to long int.
154287e6e24SBarry Smith 
155d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt
156d382aafbSBarry Smith 
157d382aafbSBarry Smith M*/
158d382aafbSBarry Smith typedef int PetscBLASInt;
159d382aafbSBarry Smith 
160d382aafbSBarry Smith /*MC
161d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
162d382aafbSBarry Smith 
163d382aafbSBarry Smith     Level: intermediate
164d382aafbSBarry Smith 
165d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1663b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
167d382aafbSBarry Smith 
1683b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
169d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
170d382aafbSBarry Smith 
1713b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
172d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
173d382aafbSBarry Smith 
174d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
175d382aafbSBarry Smith 
176d382aafbSBarry Smith M*/
177d382aafbSBarry Smith typedef int PetscMPIInt;
178d382aafbSBarry Smith 
179d382aafbSBarry Smith /*MC
180d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
181d382aafbSBarry Smith 
182d382aafbSBarry Smith     Level: intermediate
183d382aafbSBarry Smith 
184d382aafbSBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
185d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
186d382aafbSBarry Smith 
187d382aafbSBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
188d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
189d382aafbSBarry Smith 
190d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
191d382aafbSBarry Smith M*/
192d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
193d382aafbSBarry Smith 
194d382aafbSBarry Smith /*MC
195d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1963b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
197d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
198d382aafbSBarry Smith 
199d382aafbSBarry Smith    Level: intermediate
200d382aafbSBarry Smith 
201d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
202d382aafbSBarry Smith M*/
203d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
204d382aafbSBarry Smith typedef long long PetscInt;
205d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
206d382aafbSBarry Smith #else
207d382aafbSBarry Smith typedef int PetscInt;
208d382aafbSBarry Smith #define MPIU_INT MPI_INT
209d382aafbSBarry Smith #endif
210d382aafbSBarry Smith 
21158b60935SBarry Smith /*EC
21258b60935SBarry Smith 
21358b60935SBarry Smith     PetscPrecision - indicates what precision the object is using
21458b60935SBarry Smith 
21558b60935SBarry Smith     Level: advanced
21658b60935SBarry Smith 
21758b60935SBarry Smith .seealso: PetscObjectSetPrecision()
21858b60935SBarry Smith E*/
21958b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
22058b60935SBarry Smith extern const char *PetscPrecisions[];
22158b60935SBarry Smith 
22258b60935SBarry Smith 
223503cfb0cSBarry Smith /*
224503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
225503cfb0cSBarry Smith */
226d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
227d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
228d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
229d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
230d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
231d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
232d382aafbSBarry Smith #else
233d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
234d382aafbSBarry Smith #endif
235d382aafbSBarry Smith 
236d382aafbSBarry Smith 
237d382aafbSBarry Smith /*
238d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
239d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
240d382aafbSBarry Smith */
241d382aafbSBarry Smith 
242d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
243d382aafbSBarry Smith 
244d382aafbSBarry Smith /*
245d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
246d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
247d382aafbSBarry Smith */
248d382aafbSBarry Smith extern FILE* PETSC_STDERR;
249d382aafbSBarry Smith 
250d382aafbSBarry Smith /*
251d382aafbSBarry Smith       PETSC_ZOPEFD is used to send data to the PETSc webpage.  It can be used
252d382aafbSBarry Smith     in conjunction with PETSC_STDOUT, or by itself.
253d382aafbSBarry Smith */
254d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD;
255d382aafbSBarry Smith 
256d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
257d382aafbSBarry Smith /*MC
258d382aafbSBarry Smith       PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of
259d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
260d382aafbSBarry Smith 
261d382aafbSBarry Smith    Synopsis:
262d382aafbSBarry Smith    PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function))
263d382aafbSBarry Smith 
264eca87e8dSBarry Smith      Not collective
265eca87e8dSBarry Smith 
266d382aafbSBarry Smith    Level: developer
267d382aafbSBarry Smith 
268d382aafbSBarry Smith     Example:
269d382aafbSBarry Smith       PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine
270d382aafbSBarry Smith            PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r)
271d382aafbSBarry Smith 
272d382aafbSBarry Smith .seealso: PetscPolymorphicFunction()
273d382aafbSBarry Smith 
274d382aafbSBarry Smith M*/
275d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;}
276d382aafbSBarry Smith 
277d382aafbSBarry Smith /*MC
278d382aafbSBarry Smith       PetscPolymorphicScalar - allows defining a C++ polymorphic version of
279d382aafbSBarry Smith             a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument
280d382aafbSBarry Smith 
281d382aafbSBarry Smith    Synopsis:
282d382aafbSBarry Smith    PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function))
283d382aafbSBarry Smith 
284eca87e8dSBarry Smith    Not collective
285eca87e8dSBarry Smith 
286d382aafbSBarry Smith    Level: developer
287d382aafbSBarry Smith 
288d382aafbSBarry Smith     Example:
289d382aafbSBarry Smith       PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine
290d382aafbSBarry Smith            PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);}
291d382aafbSBarry Smith 
292d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine()
293d382aafbSBarry Smith 
294d382aafbSBarry Smith M*/
295d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;}
296d382aafbSBarry Smith 
297d382aafbSBarry Smith /*MC
298d382aafbSBarry Smith       PetscPolymorphicFunction - allows defining a C++ polymorphic version of
299d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
300d382aafbSBarry Smith             and returns the computed value (istead of an error code)
301d382aafbSBarry Smith 
302d382aafbSBarry Smith    Synopsis:
303d382aafbSBarry Smith    PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name)
304d382aafbSBarry Smith 
305eca87e8dSBarry Smith      Not collective
306eca87e8dSBarry Smith 
307d382aafbSBarry Smith    Level: developer
308d382aafbSBarry Smith 
309d382aafbSBarry Smith     Example:
310d382aafbSBarry Smith       PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine
311d382aafbSBarry Smith          PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;}
312d382aafbSBarry Smith 
313d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine()
314d382aafbSBarry Smith 
315d382aafbSBarry Smith M*/
316d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;}
317d382aafbSBarry Smith 
318d382aafbSBarry Smith #else
319d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C)
320d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C)
321d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E)
322d382aafbSBarry Smith #endif
323d382aafbSBarry Smith 
324d382aafbSBarry Smith /*MC
325d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
326d382aafbSBarry Smith 
327d382aafbSBarry Smith     Synopsis:
328ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
329d382aafbSBarry Smith 
330eca87e8dSBarry Smith     Not Collective
331eca87e8dSBarry Smith 
332d382aafbSBarry Smith     Input Parameters:
333d382aafbSBarry Smith .   cond - condition or expression
334d382aafbSBarry Smith 
335d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
336d382aafbSBarry Smith     branch is unlikely.
337d382aafbSBarry Smith 
338d382aafbSBarry Smith     Level: advanced
339d382aafbSBarry Smith 
340d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
341d382aafbSBarry Smith M*/
342d382aafbSBarry Smith 
343d382aafbSBarry Smith /*MC
344d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
345d382aafbSBarry Smith 
346d382aafbSBarry Smith     Synopsis:
347ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
348d382aafbSBarry Smith 
349eca87e8dSBarry Smith     Not Collective
350eca87e8dSBarry Smith 
351d382aafbSBarry Smith     Input Parameters:
352d382aafbSBarry Smith .   cond - condition or expression
353d382aafbSBarry Smith 
354d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
355d382aafbSBarry Smith     branch is likely.
356d382aafbSBarry Smith 
357d382aafbSBarry Smith     Level: advanced
358d382aafbSBarry Smith 
359d382aafbSBarry Smith .seealso: PetscUnlikely()
360d382aafbSBarry Smith M*/
361d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
362d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
363d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
364d382aafbSBarry Smith #else
365cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
366cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
367d382aafbSBarry Smith #endif
368d382aafbSBarry Smith 
369d382aafbSBarry Smith /*
370d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
371d382aafbSBarry Smith */
372d382aafbSBarry Smith #include "petscmath.h"
373d382aafbSBarry Smith 
374d382aafbSBarry Smith /*
375d382aafbSBarry Smith     Declare extern C stuff after including external header files
376d382aafbSBarry Smith */
377d382aafbSBarry Smith 
378d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
379d382aafbSBarry Smith 
380d382aafbSBarry Smith /*
381d382aafbSBarry Smith        Basic PETSc constants
382d382aafbSBarry Smith */
383d382aafbSBarry Smith 
384d382aafbSBarry Smith /*E
385ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
386d382aafbSBarry Smith 
387d382aafbSBarry Smith    Level: beginner
388d382aafbSBarry Smith 
389ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
39034e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
39134e82e7dSBarry Smith 
392d382aafbSBarry Smith E*/
393ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
394ace3abfcSBarry Smith extern const char *PetscBools[];
39570b3c8c7SBarry Smith 
39670b3c8c7SBarry Smith /*E
39770b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
39870b3c8c7SBarry Smith 
39970b3c8c7SBarry Smith    Level: beginner
40070b3c8c7SBarry Smith 
40170b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
40270b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
40370b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
40470b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
40570b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
40670b3c8c7SBarry Smith 
40770b3c8c7SBarry Smith E*/
40870b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
40970b3c8c7SBarry Smith extern const char *PetscCopyModes[];
410d382aafbSBarry Smith 
411d382aafbSBarry Smith /*MC
412ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
413d382aafbSBarry Smith 
414d382aafbSBarry Smith     Level: beginner
415d382aafbSBarry Smith 
416d382aafbSBarry Smith     Note: Zero integer
417d382aafbSBarry Smith 
418ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
419d382aafbSBarry Smith M*/
420d382aafbSBarry Smith 
421d382aafbSBarry Smith /*MC
422ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
423d382aafbSBarry Smith 
424d382aafbSBarry Smith     Level: beginner
425d382aafbSBarry Smith 
426d382aafbSBarry Smith     Note: Nonzero integer
427d382aafbSBarry Smith 
428ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
429d382aafbSBarry Smith M*/
430d382aafbSBarry Smith 
431d382aafbSBarry Smith /*MC
432d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
433d382aafbSBarry Smith 
434d382aafbSBarry Smith    Level: beginner
435d382aafbSBarry Smith 
436d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
437d382aafbSBarry Smith           some default
438d382aafbSBarry Smith 
439d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
440503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
441d382aafbSBarry Smith 
44234e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
44334e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
44434e82e7dSBarry Smith 
445d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
446d382aafbSBarry Smith 
447d382aafbSBarry Smith M*/
448d382aafbSBarry Smith #define PETSC_NULL           0
449d382aafbSBarry Smith 
450d382aafbSBarry Smith /*MC
451d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
452d382aafbSBarry Smith 
453d382aafbSBarry Smith    Level: beginner
454d382aafbSBarry Smith 
455d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
456d382aafbSBarry Smith           some default
457d382aafbSBarry Smith 
458d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
459d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
460d382aafbSBarry Smith 
461d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
462d382aafbSBarry Smith 
463d382aafbSBarry Smith M*/
464d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
465d382aafbSBarry Smith 
466d382aafbSBarry Smith /*MC
467557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
468557d4da8SBarry Smith        where you wish PETSc to use the default.
469557d4da8SBarry Smith 
470557d4da8SBarry Smith    Level: beginner
471557d4da8SBarry Smith 
472557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
473557d4da8SBarry Smith 
474557d4da8SBarry Smith M*/
475557d4da8SBarry Smith #define PETSC_DECIDE  -1
476557d4da8SBarry Smith 
477557d4da8SBarry Smith /*MC
478d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
479d382aafbSBarry Smith        where you wish PETSc to compute the required value.
480d382aafbSBarry Smith 
481d382aafbSBarry Smith    Level: beginner
482d382aafbSBarry Smith 
483557d4da8SBarry Smith 
484557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
485557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
486557d4da8SBarry Smith 
487d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
488d382aafbSBarry Smith 
489d382aafbSBarry Smith M*/
490d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
491d382aafbSBarry Smith 
492d382aafbSBarry Smith /*MC
493557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
494557d4da8SBarry Smith        where you wish PETSc to use the default.
495557d4da8SBarry Smith 
496557d4da8SBarry Smith    Level: beginner
497557d4da8SBarry Smith 
498557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
499557d4da8SBarry Smith 
500557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
501557d4da8SBarry Smith 
502557d4da8SBarry Smith M*/
503557d4da8SBarry Smith #define PETSC_DEFAULT  -2
504557d4da8SBarry Smith 
505557d4da8SBarry Smith /*MC
506d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
507d382aafbSBarry Smith            all the processs that PETSc knows about.
508d382aafbSBarry Smith 
509d382aafbSBarry Smith    Level: beginner
510d382aafbSBarry Smith 
511d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
512d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
513d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
514d382aafbSBarry Smith           PetscInitialize()
515d382aafbSBarry Smith 
516d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
517d382aafbSBarry Smith 
518d382aafbSBarry Smith M*/
519d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
520d382aafbSBarry Smith 
521d382aafbSBarry Smith /*MC
522503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
523d382aafbSBarry Smith 
524d382aafbSBarry Smith    Level: beginner
525d382aafbSBarry Smith 
526d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
527d382aafbSBarry Smith 
528d382aafbSBarry Smith M*/
529d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
530d382aafbSBarry Smith 
5317087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
5327087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
533d382aafbSBarry Smith 
5347087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
5357087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
5367087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
537d382aafbSBarry Smith 
538d382aafbSBarry Smith /*MC
539d382aafbSBarry Smith    PetscMalloc - Allocates memory
540d382aafbSBarry Smith 
541eca87e8dSBarry Smith    Synopsis:
542eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
543eca87e8dSBarry Smith 
544eca87e8dSBarry Smith    Not Collective
545eca87e8dSBarry Smith 
546d382aafbSBarry Smith    Input Parameter:
547d382aafbSBarry Smith .  m - number of bytes to allocate
548d382aafbSBarry Smith 
549d382aafbSBarry Smith    Output Parameter:
550d382aafbSBarry Smith .  result - memory allocated
551d382aafbSBarry Smith 
552d382aafbSBarry Smith    Level: beginner
553d382aafbSBarry Smith 
554d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
555d382aafbSBarry Smith 
556d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
557d382aafbSBarry Smith           properly handle not freeing the null pointer.
558d382aafbSBarry Smith 
559d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
560d382aafbSBarry Smith 
561d382aafbSBarry Smith   Concepts: memory allocation
562d382aafbSBarry Smith 
563d382aafbSBarry Smith M*/
5642714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
565d382aafbSBarry Smith 
566d382aafbSBarry Smith /*MC
567503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
568d382aafbSBarry Smith 
569d382aafbSBarry Smith    Synopsis:
570d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
571d382aafbSBarry Smith 
572eca87e8dSBarry Smith    Not Collective
573eca87e8dSBarry Smith 
574eca87e8dSBarry Smith    Input Parameters:
575eca87e8dSBarry Smith .  addr - address to align (any pointer type)
576eca87e8dSBarry Smith 
577d382aafbSBarry Smith    Level: developer
578d382aafbSBarry Smith 
579d382aafbSBarry Smith .seealso: PetscMallocAlign()
580d382aafbSBarry Smith 
581d382aafbSBarry Smith   Concepts: memory allocation
582d382aafbSBarry Smith M*/
583d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
584d382aafbSBarry Smith 
585d382aafbSBarry Smith /*MC
586503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
587d382aafbSBarry Smith 
588eca87e8dSBarry Smith    Synopsis:
589eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
590eca87e8dSBarry Smith 
591eca87e8dSBarry Smith    Not Collective
592eca87e8dSBarry Smith 
593d382aafbSBarry Smith    Input Parameter:
594d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
595d382aafbSBarry Smith .  t1 - type of first memory elements
596d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
597d382aafbSBarry Smith -  t2 - type of second memory elements
598d382aafbSBarry Smith 
599d382aafbSBarry Smith    Output Parameter:
600d382aafbSBarry Smith +  r1 - memory allocated in first chunk
601d382aafbSBarry Smith -  r2 - memory allocated in second chunk
602d382aafbSBarry Smith 
603d382aafbSBarry Smith    Level: developer
604d382aafbSBarry Smith 
605d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
606d382aafbSBarry Smith 
607d382aafbSBarry Smith   Concepts: memory allocation
608d382aafbSBarry Smith 
609d382aafbSBarry Smith M*/
610d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
611d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
612d382aafbSBarry Smith #else
6133b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \
614d382aafbSBarry Smith                                          || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
615d382aafbSBarry Smith #endif
616d382aafbSBarry Smith 
617d382aafbSBarry Smith /*MC
618503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
619d382aafbSBarry Smith 
620eca87e8dSBarry Smith    Synopsis:
621eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
622eca87e8dSBarry Smith 
623eca87e8dSBarry Smith    Not Collective
624eca87e8dSBarry Smith 
625d382aafbSBarry Smith    Input Parameter:
626d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
627d382aafbSBarry Smith .  t1 - type of first memory elements
628d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
629d382aafbSBarry Smith .  t2 - type of second memory elements
630d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
631d382aafbSBarry Smith -  t3 - type of third memory elements
632d382aafbSBarry Smith 
633d382aafbSBarry Smith    Output Parameter:
634d382aafbSBarry Smith +  r1 - memory allocated in first chunk
635d382aafbSBarry Smith .  r2 - memory allocated in second chunk
636d382aafbSBarry Smith -  r3 - memory allocated in third chunk
637d382aafbSBarry Smith 
638d382aafbSBarry Smith    Level: developer
639d382aafbSBarry Smith 
640d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
641d382aafbSBarry Smith 
642d382aafbSBarry Smith   Concepts: memory allocation
643d382aafbSBarry Smith 
644d382aafbSBarry Smith M*/
645d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
646d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
647d382aafbSBarry Smith #else
6483b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
649d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
650d382aafbSBarry Smith #endif
651d382aafbSBarry Smith 
652d382aafbSBarry Smith /*MC
653503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
654d382aafbSBarry Smith 
655eca87e8dSBarry Smith    Synopsis:
656eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
657eca87e8dSBarry Smith 
658eca87e8dSBarry Smith    Not Collective
659eca87e8dSBarry Smith 
660d382aafbSBarry Smith    Input Parameter:
661d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
662d382aafbSBarry Smith .  t1 - type of first memory elements
663d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
664d382aafbSBarry Smith .  t2 - type of second memory elements
665d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
666d382aafbSBarry Smith .  t3 - type of third memory elements
667d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
668d382aafbSBarry Smith -  t4 - type of fourth memory elements
669d382aafbSBarry Smith 
670d382aafbSBarry Smith    Output Parameter:
671d382aafbSBarry Smith +  r1 - memory allocated in first chunk
672d382aafbSBarry Smith .  r2 - memory allocated in second chunk
673d382aafbSBarry Smith .  r3 - memory allocated in third chunk
674d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
675d382aafbSBarry Smith 
676d382aafbSBarry Smith    Level: developer
677d382aafbSBarry Smith 
678d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
679d382aafbSBarry Smith 
680d382aafbSBarry Smith   Concepts: memory allocation
681d382aafbSBarry Smith 
682d382aafbSBarry Smith M*/
683d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
684d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
685d382aafbSBarry Smith #else
686d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6873b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
688d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
689d382aafbSBarry Smith #endif
690d382aafbSBarry Smith 
691d382aafbSBarry Smith /*MC
692503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
693d382aafbSBarry Smith 
694eca87e8dSBarry Smith    Synopsis:
695eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
696eca87e8dSBarry Smith 
697eca87e8dSBarry Smith    Not Collective
698eca87e8dSBarry Smith 
699d382aafbSBarry Smith    Input Parameter:
700d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
701d382aafbSBarry Smith .  t1 - type of first memory elements
702d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
703d382aafbSBarry Smith .  t2 - type of second memory elements
704d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
705d382aafbSBarry Smith .  t3 - type of third memory elements
706d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
707d382aafbSBarry Smith .  t4 - type of fourth memory elements
708d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
709d382aafbSBarry Smith -  t5 - type of fifth memory elements
710d382aafbSBarry Smith 
711d382aafbSBarry Smith    Output Parameter:
712d382aafbSBarry Smith +  r1 - memory allocated in first chunk
713d382aafbSBarry Smith .  r2 - memory allocated in second chunk
714d382aafbSBarry Smith .  r3 - memory allocated in third chunk
715d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
716d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
717d382aafbSBarry Smith 
718d382aafbSBarry Smith    Level: developer
719d382aafbSBarry Smith 
720d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
721d382aafbSBarry Smith 
722d382aafbSBarry Smith   Concepts: memory allocation
723d382aafbSBarry Smith 
724d382aafbSBarry Smith M*/
725d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
726d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
727d382aafbSBarry Smith #else
728d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
7293b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
730d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
731d382aafbSBarry Smith #endif
732d382aafbSBarry Smith 
733d382aafbSBarry Smith 
734d382aafbSBarry Smith /*MC
735503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
736d382aafbSBarry Smith 
737eca87e8dSBarry Smith    Synopsis:
738eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
739eca87e8dSBarry Smith 
740eca87e8dSBarry Smith    Not Collective
741eca87e8dSBarry Smith 
742d382aafbSBarry Smith    Input Parameter:
743d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
744d382aafbSBarry Smith .  t1 - type of first memory elements
745d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
746d382aafbSBarry Smith .  t2 - type of second memory elements
747d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
748d382aafbSBarry Smith .  t3 - type of third memory elements
749d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
750d382aafbSBarry Smith .  t4 - type of fourth memory elements
751d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
752d382aafbSBarry Smith .  t5 - type of fifth memory elements
753d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
754d382aafbSBarry Smith -  t6 - type of sixth memory elements
755d382aafbSBarry Smith 
756d382aafbSBarry Smith    Output Parameter:
757d382aafbSBarry Smith +  r1 - memory allocated in first chunk
758d382aafbSBarry Smith .  r2 - memory allocated in second chunk
759d382aafbSBarry Smith .  r3 - memory allocated in third chunk
760d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
761d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
762d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
763d382aafbSBarry Smith 
764d382aafbSBarry Smith    Level: developer
765d382aafbSBarry Smith 
766d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
767d382aafbSBarry Smith 
768d382aafbSBarry Smith   Concepts: memory allocation
769d382aafbSBarry Smith 
770d382aafbSBarry Smith M*/
771d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
772d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
773d382aafbSBarry Smith #else
774d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7753b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
776d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
777d382aafbSBarry Smith #endif
778d382aafbSBarry Smith 
779d382aafbSBarry Smith /*MC
780503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
781d382aafbSBarry Smith 
782eca87e8dSBarry Smith    Synopsis:
783eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
784eca87e8dSBarry Smith 
785eca87e8dSBarry Smith    Not Collective
786eca87e8dSBarry Smith 
787d382aafbSBarry Smith    Input Parameter:
788d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
789d382aafbSBarry Smith .  t1 - type of first memory elements
790d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
791d382aafbSBarry Smith .  t2 - type of second memory elements
792d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
793d382aafbSBarry Smith .  t3 - type of third memory elements
794d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
795d382aafbSBarry Smith .  t4 - type of fourth memory elements
796d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
797d382aafbSBarry Smith .  t5 - type of fifth memory elements
798d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
799d382aafbSBarry Smith .  t6 - type of sixth memory elements
800d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
801d382aafbSBarry Smith -  t7 - type of sixth memory elements
802d382aafbSBarry Smith 
803d382aafbSBarry Smith    Output Parameter:
804d382aafbSBarry Smith +  r1 - memory allocated in first chunk
805d382aafbSBarry Smith .  r2 - memory allocated in second chunk
806d382aafbSBarry Smith .  r3 - memory allocated in third chunk
807d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
808d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
809d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
810eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
811d382aafbSBarry Smith 
812d382aafbSBarry Smith    Level: developer
813d382aafbSBarry Smith 
814d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
815d382aafbSBarry Smith 
816d382aafbSBarry Smith   Concepts: memory allocation
817d382aafbSBarry Smith 
818d382aafbSBarry Smith M*/
819d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
820d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
821d382aafbSBarry Smith #else
822d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
8233b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
824d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
825d382aafbSBarry Smith #endif
826d382aafbSBarry Smith 
827d382aafbSBarry Smith /*MC
828503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
829d382aafbSBarry Smith 
830eca87e8dSBarry Smith    Synopsis:
831eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
832eca87e8dSBarry Smith 
833eca87e8dSBarry Smith    Not Collective
834eca87e8dSBarry Smith 
835d382aafbSBarry Smith    Input Parameter:
836d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
837d382aafbSBarry Smith 
838d382aafbSBarry Smith    Output Parameter:
839d382aafbSBarry Smith .  result - memory allocated
840d382aafbSBarry Smith 
841d382aafbSBarry Smith    Level: beginner
842d382aafbSBarry Smith 
843ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
844d382aafbSBarry Smith 
845d382aafbSBarry Smith   Concepts: memory allocation
846d382aafbSBarry Smith 
847d382aafbSBarry Smith M*/
848d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
849ad0619ddSBarry Smith 
850ad0619ddSBarry Smith /*MC
851ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
852ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
853ad0619ddSBarry Smith 
854ad0619ddSBarry Smith    Synopsis:
855ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
856ad0619ddSBarry Smith 
857ad0619ddSBarry Smith    Not Collective
858ad0619ddSBarry Smith 
859ad0619ddSBarry Smith    Input Parameter:
860ad0619ddSBarry Smith +  obj - object memory is logged to
861ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
862ad0619ddSBarry Smith 
863ad0619ddSBarry Smith    Output Parameter:
864ad0619ddSBarry Smith .  result - memory allocated
865ad0619ddSBarry Smith 
866ad0619ddSBarry Smith    Level: developer
867ad0619ddSBarry Smith 
868ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
869ad0619ddSBarry Smith 
870ad0619ddSBarry Smith   Concepts: memory allocation
871ad0619ddSBarry Smith 
872ad0619ddSBarry Smith M*/
873d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
874d382aafbSBarry Smith 
875d382aafbSBarry Smith /*MC
876d382aafbSBarry Smith    PetscFree - Frees memory
877d382aafbSBarry Smith 
878eca87e8dSBarry Smith    Synopsis:
879eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
880eca87e8dSBarry Smith 
881eca87e8dSBarry Smith    Not Collective
882eca87e8dSBarry Smith 
883d382aafbSBarry Smith    Input Parameter:
884d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
885d382aafbSBarry Smith 
886d382aafbSBarry Smith    Level: beginner
887d382aafbSBarry Smith 
888d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
889d382aafbSBarry Smith 
890d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
891d382aafbSBarry Smith 
892d382aafbSBarry Smith   Concepts: memory allocation
893d382aafbSBarry Smith 
894d382aafbSBarry Smith M*/
89512537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
896d382aafbSBarry Smith 
897d382aafbSBarry Smith /*MC
898d382aafbSBarry Smith    PetscFreeVoid - Frees memory
899d382aafbSBarry Smith 
900d382aafbSBarry Smith    Synopsis:
901d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
902d382aafbSBarry Smith 
903eca87e8dSBarry Smith    Not Collective
904eca87e8dSBarry Smith 
905eca87e8dSBarry Smith    Input Parameter:
906eca87e8dSBarry Smith .   memory - memory to free
907eca87e8dSBarry Smith 
908d382aafbSBarry Smith    Level: beginner
909d382aafbSBarry Smith 
910d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
911d382aafbSBarry Smith 
912d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
913d382aafbSBarry Smith 
914d382aafbSBarry Smith   Concepts: memory allocation
915d382aafbSBarry Smith 
916d382aafbSBarry Smith M*/
9172714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
918d382aafbSBarry Smith 
919d382aafbSBarry Smith 
920d382aafbSBarry Smith /*MC
921d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
922d382aafbSBarry Smith 
923eca87e8dSBarry Smith    Synopsis:
924eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
925eca87e8dSBarry Smith 
926eca87e8dSBarry Smith    Not Collective
927eca87e8dSBarry Smith 
928d382aafbSBarry Smith    Input Parameter:
929d382aafbSBarry Smith +   memory1 - memory to free
930d382aafbSBarry Smith -   memory2 - 2nd memory to free
931d382aafbSBarry Smith 
932d382aafbSBarry Smith    Level: developer
933d382aafbSBarry Smith 
934d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
935d382aafbSBarry Smith 
936d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
937d382aafbSBarry Smith 
938d382aafbSBarry Smith   Concepts: memory allocation
939d382aafbSBarry Smith 
940d382aafbSBarry Smith M*/
941d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
942d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
943d382aafbSBarry Smith #else
94481dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
945d382aafbSBarry Smith #endif
946d382aafbSBarry Smith 
947d382aafbSBarry Smith /*MC
948d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
949d382aafbSBarry Smith 
950eca87e8dSBarry Smith    Synopsis:
951eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
952eca87e8dSBarry Smith 
953eca87e8dSBarry Smith    Not Collective
954eca87e8dSBarry Smith 
955d382aafbSBarry Smith    Input Parameter:
956d382aafbSBarry Smith +   memory1 - memory to free
957d382aafbSBarry Smith .   memory2 - 2nd memory to free
958d382aafbSBarry Smith -   memory3 - 3rd memory to free
959d382aafbSBarry Smith 
960d382aafbSBarry Smith    Level: developer
961d382aafbSBarry Smith 
962d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
963d382aafbSBarry Smith 
964d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
965d382aafbSBarry Smith 
966d382aafbSBarry Smith   Concepts: memory allocation
967d382aafbSBarry Smith 
968d382aafbSBarry Smith M*/
969d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
970d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
971d382aafbSBarry Smith #else
97281dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
973d382aafbSBarry Smith #endif
974d382aafbSBarry Smith 
975d382aafbSBarry Smith /*MC
976d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
977d382aafbSBarry Smith 
978eca87e8dSBarry Smith    Synopsis:
979eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
980eca87e8dSBarry Smith 
981eca87e8dSBarry Smith    Not Collective
982eca87e8dSBarry Smith 
983d382aafbSBarry Smith    Input Parameter:
984d382aafbSBarry Smith +   m1 - memory to free
985d382aafbSBarry Smith .   m2 - 2nd memory to free
986d382aafbSBarry Smith .   m3 - 3rd memory to free
987d382aafbSBarry Smith -   m4 - 4th memory to free
988d382aafbSBarry Smith 
989d382aafbSBarry Smith    Level: developer
990d382aafbSBarry Smith 
991d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
992d382aafbSBarry Smith 
993d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
994d382aafbSBarry Smith 
995d382aafbSBarry Smith   Concepts: memory allocation
996d382aafbSBarry Smith 
997d382aafbSBarry Smith M*/
998d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
999d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1000d382aafbSBarry Smith #else
100181dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1002d382aafbSBarry Smith #endif
1003d382aafbSBarry Smith 
1004d382aafbSBarry Smith /*MC
1005d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1006d382aafbSBarry Smith 
1007eca87e8dSBarry Smith    Synopsis:
1008eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1009eca87e8dSBarry Smith 
1010eca87e8dSBarry Smith    Not Collective
1011eca87e8dSBarry Smith 
1012d382aafbSBarry Smith    Input Parameter:
1013d382aafbSBarry Smith +   m1 - memory to free
1014d382aafbSBarry Smith .   m2 - 2nd memory to free
1015d382aafbSBarry Smith .   m3 - 3rd memory to free
1016d382aafbSBarry Smith .   m4 - 4th memory to free
1017d382aafbSBarry Smith -   m5 - 5th memory to free
1018d382aafbSBarry Smith 
1019d382aafbSBarry Smith    Level: developer
1020d382aafbSBarry Smith 
1021d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
1022d382aafbSBarry Smith 
1023d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1024d382aafbSBarry Smith 
1025d382aafbSBarry Smith   Concepts: memory allocation
1026d382aafbSBarry Smith 
1027d382aafbSBarry Smith M*/
1028d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1029d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1030d382aafbSBarry Smith #else
103181dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1032d382aafbSBarry Smith #endif
1033d382aafbSBarry Smith 
1034d382aafbSBarry Smith 
1035d382aafbSBarry Smith /*MC
1036d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1037d382aafbSBarry Smith 
1038eca87e8dSBarry Smith    Synopsis:
1039eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1040eca87e8dSBarry Smith 
1041eca87e8dSBarry Smith    Not Collective
1042eca87e8dSBarry Smith 
1043d382aafbSBarry Smith    Input Parameter:
1044d382aafbSBarry Smith +   m1 - memory to free
1045d382aafbSBarry Smith .   m2 - 2nd memory to free
1046d382aafbSBarry Smith .   m3 - 3rd memory to free
1047d382aafbSBarry Smith .   m4 - 4th memory to free
1048d382aafbSBarry Smith .   m5 - 5th memory to free
1049d382aafbSBarry Smith -   m6 - 6th memory to free
1050d382aafbSBarry Smith 
1051d382aafbSBarry Smith 
1052d382aafbSBarry Smith    Level: developer
1053d382aafbSBarry Smith 
1054d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1055d382aafbSBarry Smith 
1056d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1057d382aafbSBarry Smith 
1058d382aafbSBarry Smith   Concepts: memory allocation
1059d382aafbSBarry Smith 
1060d382aafbSBarry Smith M*/
1061d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1062d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1063d382aafbSBarry Smith #else
106481dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1065d382aafbSBarry Smith #endif
1066d382aafbSBarry Smith 
1067d382aafbSBarry Smith /*MC
1068d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1069d382aafbSBarry Smith 
1070eca87e8dSBarry Smith    Synopsis:
1071eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1072eca87e8dSBarry Smith 
1073eca87e8dSBarry Smith    Not Collective
1074eca87e8dSBarry Smith 
1075d382aafbSBarry Smith    Input Parameter:
1076d382aafbSBarry Smith +   m1 - memory to free
1077d382aafbSBarry Smith .   m2 - 2nd memory to free
1078d382aafbSBarry Smith .   m3 - 3rd memory to free
1079d382aafbSBarry Smith .   m4 - 4th memory to free
1080d382aafbSBarry Smith .   m5 - 5th memory to free
1081d382aafbSBarry Smith .   m6 - 6th memory to free
1082d382aafbSBarry Smith -   m7 - 7th memory to free
1083d382aafbSBarry Smith 
1084d382aafbSBarry Smith 
1085d382aafbSBarry Smith    Level: developer
1086d382aafbSBarry Smith 
1087d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1088d382aafbSBarry Smith 
1089d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1090d382aafbSBarry Smith           PetscMalloc7()
1091d382aafbSBarry Smith 
1092d382aafbSBarry Smith   Concepts: memory allocation
1093d382aafbSBarry Smith 
1094d382aafbSBarry Smith M*/
1095d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1096d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1097d382aafbSBarry Smith #else
109881dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1099d382aafbSBarry Smith #endif
1100d382aafbSBarry Smith 
11017087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
11027087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
11037087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
11047087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1105d382aafbSBarry Smith 
1106d382aafbSBarry Smith /*
110766d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1108d382aafbSBarry Smith */
11097087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
11107087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
11117087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
11127087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
11137087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
11147087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
11157087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
1116d382aafbSBarry Smith 
1117d382aafbSBarry Smith 
1118d382aafbSBarry Smith /*E
1119d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1120d382aafbSBarry Smith 
1121d382aafbSBarry Smith    Level: beginner
1122d382aafbSBarry Smith 
1123d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1124d382aafbSBarry Smith 
1125d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1126d382aafbSBarry Smith           PetscDataTypeGetSize()
1127d382aafbSBarry Smith 
1128d382aafbSBarry Smith E*/
1129d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
1130557d4da8SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC_LONG_DOUBLE = 10} PetscDataType;
1131d382aafbSBarry Smith extern const char *PetscDataTypes[];
1132d382aafbSBarry Smith 
1133d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1134d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1135d382aafbSBarry Smith #else
1136ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1137d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
1138ce63c4c1SBarry Smith #elif defined(PETSC_USE_REAL_LONG_DOUBLE)
1139d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_LONG_DOUBLE
1140d382aafbSBarry Smith #else
1141d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1142d382aafbSBarry Smith #endif
1143d382aafbSBarry Smith #endif
1144ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1145d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
1146ce63c4c1SBarry Smith #elif defined(PETSC_USE_REAL_LONG_DOUBLE)
1147d382aafbSBarry Smith #define  PETSC_REAL  PETSC_LONG_DOUBLE
1148d382aafbSBarry Smith #else
1149d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1150d382aafbSBarry Smith #endif
1151d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1152d382aafbSBarry Smith 
11537087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11547087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11557087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1156d382aafbSBarry Smith 
1157d382aafbSBarry Smith /*
1158d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1159d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1160d382aafbSBarry Smith    functionality and/or error checking.
1161d382aafbSBarry Smith */
11627087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11637087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11647087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11657087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11667087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11677087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11687087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11697087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11707087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11717087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11727087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11737087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11747087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
11757087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
11767087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
11777087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
11787087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
11797087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
11807087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
11817087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
11827087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1183d382aafbSBarry Smith 
1184d382aafbSBarry Smith /*S
1185d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1186d382aafbSBarry Smith 
1187d382aafbSBarry Smith   Level: intermediate
1188d382aafbSBarry Smith 
1189d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1190d382aafbSBarry Smith S*/
1191d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1192d382aafbSBarry Smith 
11937087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
11947087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
11957087cfbeSBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken);
1196d382aafbSBarry Smith 
1197d382aafbSBarry Smith /*
1198d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1199d382aafbSBarry Smith */
12007087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
1201ce63c4c1SBarry Smith #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
12027087cfbeSBarry Smith extern  MPI_Op MPIU_SUM;
1203d382aafbSBarry Smith #else
1204d382aafbSBarry Smith #define MPIU_SUM MPI_SUM
1205d382aafbSBarry Smith #endif
1206ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128)
1207d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1208d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1209d9822059SBarry Smith #else
1210d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1211d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1212d9822059SBarry Smith #endif
12137087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1214d382aafbSBarry Smith 
1215d382aafbSBarry Smith /*S
1216d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1217d382aafbSBarry Smith 
1218d382aafbSBarry Smith    Level: beginner
1219d382aafbSBarry Smith 
1220d382aafbSBarry Smith    Note: This is the base class from which all objects appear.
1221d382aafbSBarry Smith 
12221890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1223d382aafbSBarry Smith S*/
1224d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1225d382aafbSBarry Smith 
1226d382aafbSBarry Smith /*S
1227d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1228d382aafbSBarry Smith       by string name
1229d382aafbSBarry Smith 
1230d382aafbSBarry Smith    Level: advanced
1231d382aafbSBarry Smith 
1232d382aafbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy()
1233d382aafbSBarry Smith S*/
1234d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1235d382aafbSBarry Smith 
1236d382aafbSBarry Smith /*E
1237d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1238d382aafbSBarry Smith 
1239d382aafbSBarry Smith   Level: beginner
1240d382aafbSBarry Smith 
1241d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1242d382aafbSBarry Smith 
1243d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1244d382aafbSBarry Smith 
1245d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1246d382aafbSBarry Smith 
1247d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1248d382aafbSBarry Smith 
1249d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1250d382aafbSBarry Smith 
1251d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1252d382aafbSBarry Smith E*/
1253d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1254d382aafbSBarry Smith 
1255d382aafbSBarry Smith #include "petscviewer.h"
1256d382aafbSBarry Smith #include "petscoptions.h"
1257d382aafbSBarry Smith 
12580700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12597087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
12607087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
12617087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1262d382aafbSBarry Smith 
1263d382aafbSBarry Smith /*
1264d382aafbSBarry Smith    Routines that get memory usage information from the OS
1265d382aafbSBarry Smith */
12667087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
12677087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
12687087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
12697087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1270d382aafbSBarry Smith 
12717087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
12727087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
12737087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
12747087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1275d382aafbSBarry Smith 
1276d382aafbSBarry Smith /*
1277d382aafbSBarry Smith    Initialization of PETSc
1278d382aafbSBarry Smith */
12797087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
1280d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL))
12817087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
12827087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool  *);
12837087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool  *);
12847087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
128509573ac7SBarry Smith extern PetscErrorCode PetscInitializeFortran(void);
12867087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
12877087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
12887087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1289d382aafbSBarry Smith 
12907087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
12917087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1292d382aafbSBarry Smith 
1293d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
12947087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
12957087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPSpawn(PetscMPIInt);
12967087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPFinalize(void);
12977087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
12987087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
12997087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPFree(MPI_Comm,void*);
13007087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPMalloc(MPI_Comm,size_t,void**);
1301d382aafbSBarry Smith 
13027087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
13037087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
13047087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
1305d382aafbSBarry Smith 
1306d382aafbSBarry Smith /*
1307d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
1308d382aafbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be
1309d382aafbSBarry Smith    C++.
1310d382aafbSBarry Smith */
1311d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1312d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1313d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1314d382aafbSBarry Smith 
1315d382aafbSBarry Smith /*
1316d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1317d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1318503cfb0cSBarry Smith 
1319503cfb0cSBarry Smith    Level: developer
1320503cfb0cSBarry Smith 
1321503cfb0cSBarry Smith .seealso: PetscUseMethod()
1322d382aafbSBarry Smith */
1323d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1324d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1325d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1326d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1327d382aafbSBarry Smith   }
1328503cfb0cSBarry Smith 
1329503cfb0cSBarry Smith /*
1330503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1331503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1332503cfb0cSBarry Smith 
1333503cfb0cSBarry Smith    Level: developer
1334503cfb0cSBarry Smith 
1335503cfb0cSBarry Smith .seealso: PetscTryMethod()
1336503cfb0cSBarry Smith */
1337d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1338d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1339d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1340d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1341703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1342d382aafbSBarry Smith   }
1343503cfb0cSBarry Smith 
1344d382aafbSBarry Smith /*
1345d382aafbSBarry Smith     Functions that can act on any PETSc object.
1346d382aafbSBarry Smith */
13477087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCreate(MPI_Comm,PetscObject*);
13487087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCreateGeneric(MPI_Comm, PetscClassId, const char [], PetscObject *);
13497087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject);
13507087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13517087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
13527087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13537087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13547087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13557087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13567087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13577087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13587087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13597087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
13607087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
13617087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
13627087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
13637087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
13647087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
13657087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
13667087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
13677087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
13687087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
13697087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
13707087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
13717087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
13727087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
13737087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
13747087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
1375d382aafbSBarry Smith 
1376d382aafbSBarry Smith /*MC
1377d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1378d382aafbSBarry Smith 
1379eca87e8dSBarry Smith     Synopsis:
1380eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1381eca87e8dSBarry Smith 
1382ad4df100SBarry Smith    Logically Collective on PetscObject
1383d382aafbSBarry Smith 
1384d382aafbSBarry Smith    Input Parameters:
1385d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1386d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1387d382aafbSBarry Smith .  name - name associated with the child function
1388d382aafbSBarry Smith .  fname - name of the function
1389d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1390d382aafbSBarry Smith 
1391d382aafbSBarry Smith    Level: advanced
1392d382aafbSBarry Smith 
1393d382aafbSBarry Smith 
1394d382aafbSBarry Smith    Notes:
1395d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1396d382aafbSBarry Smith 
1397d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1398d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1399d382aafbSBarry Smith 
1400d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
140120de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1402d382aafbSBarry Smith    enabled.
1403d382aafbSBarry Smith 
1404d382aafbSBarry Smith    Concepts: objects^composing functions
1405d382aafbSBarry Smith    Concepts: composing functions
1406d382aafbSBarry Smith    Concepts: functions^querying
1407d382aafbSBarry Smith    Concepts: objects^querying
1408d382aafbSBarry Smith    Concepts: querying objects
1409d382aafbSBarry Smith 
1410d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1411d382aafbSBarry Smith M*/
1412d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1413d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1414d382aafbSBarry Smith #else
1415d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1416d382aafbSBarry Smith #endif
1417d382aafbSBarry Smith 
14187087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
14197087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
14207087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
14217087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
14227087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
14237087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
14247087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
14257087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
14267087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
14277087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
14287087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
14297087cfbeSBarry Smith extern PetscErrorCode  PetscTypeCompare(PetscObject,const char[],PetscBool *);
14307087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
14317087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1432d382aafbSBarry Smith 
1433d382aafbSBarry Smith /*
1434d382aafbSBarry Smith     Defines PETSc error handling.
1435d382aafbSBarry Smith */
1436d382aafbSBarry Smith #include "petscerror.h"
1437d382aafbSBarry Smith 
1438d382aafbSBarry Smith /*S
1439503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1440d382aafbSBarry Smith 
14411d0fab5eSBarry Smith    Level: developer
1442d382aafbSBarry Smith 
14431d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14441d0fab5eSBarry Smith 
14451d0fab5eSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery()
1446d382aafbSBarry Smith S*/
1447d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1448d382aafbSBarry Smith 
14497087cfbeSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList);
14507087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
14517087cfbeSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**);
14527087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14537087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1454d382aafbSBarry Smith 
1455d382aafbSBarry Smith /*
1456503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1457d382aafbSBarry Smith   link libraries that will be loaded as needed.
1458d382aafbSBarry Smith */
14597087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
14607087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
14617087cfbeSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],void (**)(void));
14627087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1463d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1464d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1465d382aafbSBarry Smith #else
1466d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1467d382aafbSBarry Smith #endif
14687087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
14697087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
14707087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
14717087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1472d382aafbSBarry Smith 
1473d382aafbSBarry Smith /*S
1474d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1475d382aafbSBarry Smith 
1476d382aafbSBarry Smith    Level: advanced
1477d382aafbSBarry Smith 
147820de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1479d382aafbSBarry Smith 
1480d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1481d382aafbSBarry Smith S*/
1482d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
14837087cfbeSBarry Smith extern  PetscDLLibrary DLLibrariesLoaded;
14847087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
14857087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
14867087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
14877087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
14887087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
14897087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
14907087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
14917087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1492d382aafbSBarry Smith 
1493d382aafbSBarry Smith /*
149405846914SDmitry Karpeev   PetscFwk support.  Needs to be documented.
149505846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
149605846914SDmitry Karpeev */
149705846914SDmitry Karpeev #include "petscfwk.h"
149805846914SDmitry Karpeev 
149905846914SDmitry Karpeev /*
1500d382aafbSBarry Smith      Useful utility routines
1501d382aafbSBarry Smith */
15027087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
15037087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
15047087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1505d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1))
1506d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1))
15077087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1508d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1))
1509d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1))
15107087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
15117087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1512d382aafbSBarry Smith 
1513503cfb0cSBarry Smith /*
1514ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1515503cfb0cSBarry Smith 
1516503cfb0cSBarry Smith     Notes: This is useful in cases like
1517503cfb0cSBarry Smith $     int        *a;
1518ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1519ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1520503cfb0cSBarry Smith */
1521d382aafbSBarry Smith  #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1522503cfb0cSBarry Smith 
1523d382aafbSBarry Smith /*
1524d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1525d382aafbSBarry Smith */
1526d382aafbSBarry Smith #include "petscdraw.h"
1527d382aafbSBarry Smith 
1528d382aafbSBarry Smith /*
1529d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1530d382aafbSBarry Smith */
1531d382aafbSBarry Smith #include "private/petscimpl.h"
1532503cfb0cSBarry Smith 
1533238ccf28SShri Abhyankar 
1534d382aafbSBarry Smith /*MC
1535d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1536d382aafbSBarry Smith 
1537d382aafbSBarry Smith    Synopsis:
1538d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1539d382aafbSBarry Smith 
1540eca87e8dSBarry Smith     Not Collective
1541eca87e8dSBarry Smith 
1542d382aafbSBarry Smith     Input Parameters:
1543d382aafbSBarry Smith .   format - the usual printf() format string
1544d382aafbSBarry Smith 
1545d382aafbSBarry Smith    Options Database Keys:
1546d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1547d382aafbSBarry Smith          (default) stderr
1548d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1549d382aafbSBarry Smith           error is handled.)
1550d382aafbSBarry Smith 
1551d382aafbSBarry Smith    Notes: Use
1552d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1553d382aafbSBarry Smith $                        error is handled.) and
1554d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1555c9a19010SBarry Smith $        of you can use your own function
1556d382aafbSBarry Smith 
1557d382aafbSBarry Smith           Use
1558d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1559d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1560d382aafbSBarry Smith 
1561d382aafbSBarry Smith           Use
1562d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1563d382aafbSBarry Smith 
1564d382aafbSBarry Smith    Level: developer
1565d382aafbSBarry Smith 
1566d382aafbSBarry Smith     Fortran Note:
1567d382aafbSBarry Smith     This routine is not supported in Fortran.
1568d382aafbSBarry Smith 
1569d382aafbSBarry Smith     Concepts: error messages^printing
1570d382aafbSBarry Smith     Concepts: printing^error messages
1571d382aafbSBarry Smith 
1572c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1573d382aafbSBarry Smith M*/
15747087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1575d382aafbSBarry Smith 
1576d382aafbSBarry Smith /*MC
1577d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1578d382aafbSBarry Smith 
1579d382aafbSBarry Smith    Synopsis:
1580d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1581d382aafbSBarry Smith 
1582eca87e8dSBarry Smith     Not Collective
1583eca87e8dSBarry Smith 
1584d382aafbSBarry Smith     Input Parameters:
1585d382aafbSBarry Smith .   format - the usual printf() format string
1586d382aafbSBarry Smith 
1587d382aafbSBarry Smith    Level: developer
1588d382aafbSBarry Smith 
1589d382aafbSBarry Smith     Fortran Note:
1590d382aafbSBarry Smith     This routine is not supported in Fortran.
1591d382aafbSBarry Smith 
1592d382aafbSBarry Smith     Concepts: help messages^printing
1593d382aafbSBarry Smith     Concepts: printing^help messages
1594d382aafbSBarry Smith 
1595d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1596d382aafbSBarry Smith M*/
15977087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1598d382aafbSBarry Smith 
1599*17e6345fSMatthew G Knepley /*
1600*17e6345fSMatthew G Knepley      Defines PETSc profiling.
1601*17e6345fSMatthew G Knepley */
1602*17e6345fSMatthew G Knepley #include "petsclog.h"
1603*17e6345fSMatthew G Knepley 
1604*17e6345fSMatthew G Knepley /*
1605*17e6345fSMatthew G Knepley           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1606*17e6345fSMatthew G Knepley */
1607*17e6345fSMatthew G Knepley #if defined(PETSC_HAVE_AMS)
1608*17e6345fSMatthew G Knepley extern PetscBool  PetscAMSPublishAll;
1609*17e6345fSMatthew G Knepley #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1610*17e6345fSMatthew G Knepley #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1611*17e6345fSMatthew G Knepley #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1612*17e6345fSMatthew G Knepley #else
1613*17e6345fSMatthew G Knepley #define PetscObjectTakeAccess(obj)   0
1614*17e6345fSMatthew G Knepley #define PetscObjectGrantAccess(obj)  0
1615*17e6345fSMatthew G Knepley #define PetscObjectDepublish(obj)      0
1616*17e6345fSMatthew G Knepley #endif
1617*17e6345fSMatthew G Knepley 
1618*17e6345fSMatthew G Knepley /*
1619*17e6345fSMatthew G Knepley       Simple PETSc parallel IO for ASCII printing
1620*17e6345fSMatthew G Knepley */
1621*17e6345fSMatthew G Knepley extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1622*17e6345fSMatthew G Knepley extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1623*17e6345fSMatthew G Knepley extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1624*17e6345fSMatthew G Knepley extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1625*17e6345fSMatthew G Knepley extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1626*17e6345fSMatthew G Knepley extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1627*17e6345fSMatthew G Knepley 
1628*17e6345fSMatthew G Knepley 
1629*17e6345fSMatthew G Knepley 
1630*17e6345fSMatthew G Knepley /* These are used internally by PETSc ASCII IO routines*/
1631*17e6345fSMatthew G Knepley #include <stdarg.h>
1632*17e6345fSMatthew G Knepley extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1633*17e6345fSMatthew G Knepley extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1634*17e6345fSMatthew G Knepley extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
1635*17e6345fSMatthew G Knepley 
1636*17e6345fSMatthew G Knepley #if defined(PETSC_HAVE_MATLAB_ENGINE)
1637*17e6345fSMatthew G Knepley extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1638*17e6345fSMatthew G Knepley #endif
1639*17e6345fSMatthew G Knepley 
164009573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
164109573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
164209573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1643d382aafbSBarry Smith 
1644d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16457087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16467087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1647d382aafbSBarry Smith #endif
1648d382aafbSBarry Smith 
16497087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
16507087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
16517087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
16527087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
16537087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
16547087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
16557087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1656d382aafbSBarry Smith 
16577087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1658d382aafbSBarry Smith 
1659d382aafbSBarry Smith /*S
1660d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1661d382aafbSBarry Smith 
1662d382aafbSBarry Smith    Level: advanced
1663d382aafbSBarry Smith 
1664d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1665d382aafbSBarry Smith S*/
16667087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1667d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
16687087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
16697087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
16707087cfbeSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer);
16717087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
16727087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1673d382aafbSBarry Smith 
1674d382aafbSBarry Smith /*
1675d382aafbSBarry Smith    For use in debuggers
1676d382aafbSBarry Smith */
16777087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
16787087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
16797087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
16807087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
16817087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1682d382aafbSBarry Smith 
1683d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1684d382aafbSBarry Smith #include <memory.h>
1685d382aafbSBarry Smith #endif
1686d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1687d382aafbSBarry Smith #include <stdlib.h>
1688d382aafbSBarry Smith #endif
1689d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1690d382aafbSBarry Smith #include <strings.h>
1691d382aafbSBarry Smith #endif
1692d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1693d382aafbSBarry Smith #include <string.h>
1694d382aafbSBarry Smith #endif
16956c7e564aSBarry Smith 
16966c7e564aSBarry Smith 
1697d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H)
1698d382aafbSBarry Smith #include <xmmintrin.h>
1699d382aafbSBarry Smith #endif
1700d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1701d382aafbSBarry Smith #include <stdint.h>
1702d382aafbSBarry Smith #endif
1703d382aafbSBarry Smith 
1704d382aafbSBarry Smith /*@C
1705d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1706d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1707d382aafbSBarry Smith    PetscMemmove() in that case.
1708d382aafbSBarry Smith 
1709d382aafbSBarry Smith    Not Collective
1710d382aafbSBarry Smith 
1711d382aafbSBarry Smith    Input Parameters:
1712d382aafbSBarry Smith +  b - pointer to initial memory space
1713d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1714d382aafbSBarry Smith 
1715d382aafbSBarry Smith    Output Parameter:
1716d382aafbSBarry Smith .  a - pointer to copy space
1717d382aafbSBarry Smith 
1718d382aafbSBarry Smith    Level: intermediate
1719d382aafbSBarry Smith 
1720d382aafbSBarry Smith    Compile Option:
1721d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1722d382aafbSBarry Smith                                   for memory copies on double precision values.
1723d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1724d382aafbSBarry Smith                                   for memory copies on double precision values.
1725d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1726d382aafbSBarry Smith                                   for memory copies on double precision values.
1727d382aafbSBarry Smith 
1728d382aafbSBarry Smith    Note:
1729d382aafbSBarry Smith    This routine is analogous to memcpy().
1730d382aafbSBarry Smith 
1731503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1732503cfb0cSBarry Smith 
1733d382aafbSBarry Smith   Concepts: memory^copying
1734d382aafbSBarry Smith   Concepts: copying^memory
1735d382aafbSBarry Smith 
1736d382aafbSBarry Smith .seealso: PetscMemmove()
1737d382aafbSBarry Smith 
1738d382aafbSBarry Smith @*/
17397087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1740d382aafbSBarry Smith {
1741d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1742d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1743d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1744e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1745e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1746d382aafbSBarry Smith #endif
1747d382aafbSBarry Smith   PetscFunctionBegin;
1748d382aafbSBarry Smith   if (a != b) {
1749d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1750d382aafbSBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl) {
1751e32f2f54SBarry Smith       SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1752d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1753d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1754d382aafbSBarry Smith     }
1755d382aafbSBarry Smith #endif
1756d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1757d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1758d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1759d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1760d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1761d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1762d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1763d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1764d382aafbSBarry Smith #else
1765d382aafbSBarry Smith       size_t      i;
1766d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1767d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1768d382aafbSBarry Smith #endif
1769d382aafbSBarry Smith     } else {
1770d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1771d382aafbSBarry Smith     }
1772d382aafbSBarry Smith #elif defined(PETSC_HAVE__INTEL_FAST_MEMCPY)
1773d382aafbSBarry Smith     _intel_fast_memcpy((char*)(a),(char*)(b),n);
1774d382aafbSBarry Smith #else
1775d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1776d382aafbSBarry Smith #endif
1777d382aafbSBarry Smith   }
1778d382aafbSBarry Smith   PetscFunctionReturn(0);
1779d382aafbSBarry Smith }
1780d382aafbSBarry Smith 
1781d382aafbSBarry Smith /*@C
1782d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1783d382aafbSBarry Smith 
1784d382aafbSBarry Smith    Not Collective
1785d382aafbSBarry Smith 
1786d382aafbSBarry Smith    Input Parameters:
1787d382aafbSBarry Smith +  a - pointer to beginning memory location
1788d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1789d382aafbSBarry Smith 
1790d382aafbSBarry Smith    Level: intermediate
1791d382aafbSBarry Smith 
1792d382aafbSBarry Smith    Compile Option:
1793d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1794d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1795d382aafbSBarry Smith 
1796503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1797503cfb0cSBarry Smith 
1798d382aafbSBarry Smith    Concepts: memory^zeroing
1799d382aafbSBarry Smith    Concepts: zeroing^memory
1800d382aafbSBarry Smith 
1801d382aafbSBarry Smith .seealso: PetscMemcpy()
1802d382aafbSBarry Smith @*/
18037087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1804d382aafbSBarry Smith {
1805d382aafbSBarry Smith   if (n > 0) {
1806d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1807e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1808d382aafbSBarry Smith #endif
1809d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1810d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1811d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1812d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1813d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1814d382aafbSBarry Smith     } else {
1815d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1816d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1817d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1818d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1819d382aafbSBarry Smith     } else {
1820d382aafbSBarry Smith #endif
1821d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1822d382aafbSBarry Smith       bzero((char *)a,n);
1823d382aafbSBarry Smith #elif defined (PETSC_HAVE__INTEL_FAST_MEMSET)
1824d382aafbSBarry Smith       _intel_fast_memset((char*)a,0,n);
1825d382aafbSBarry Smith #else
1826d382aafbSBarry Smith       memset((char*)a,0,n);
1827d382aafbSBarry Smith #endif
1828d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1829d382aafbSBarry Smith     }
1830d382aafbSBarry Smith #endif
1831d382aafbSBarry Smith   }
1832d382aafbSBarry Smith   return 0;
1833d382aafbSBarry Smith }
1834d382aafbSBarry Smith 
1835d382aafbSBarry Smith /*MC
1836d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1837d382aafbSBarry Smith 
1838eca87e8dSBarry Smith    Synopsis:
1839eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1840eca87e8dSBarry Smith 
1841d382aafbSBarry Smith    Not Collective
1842d382aafbSBarry Smith 
1843d382aafbSBarry Smith    Input Parameters:
1844d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1845d382aafbSBarry Smith .  n - number of elements to fetch
1846d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
184750d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1848d382aafbSBarry Smith 
1849d382aafbSBarry Smith    Level: developer
1850d382aafbSBarry Smith 
1851d382aafbSBarry Smith    Notes:
1852d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1853d382aafbSBarry Smith 
185450d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
185550d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
185650d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
185763cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
185863cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
185963cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1860d382aafbSBarry Smith 
1861d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1862d382aafbSBarry Smith    address).
1863d382aafbSBarry Smith 
1864d382aafbSBarry Smith    Concepts: memory
1865d382aafbSBarry Smith M*/
1866d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1867d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1868d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1869d382aafbSBarry Smith   } while (0)
1870d382aafbSBarry Smith 
1871d382aafbSBarry Smith /*
1872e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1873d382aafbSBarry Smith */
1874d382aafbSBarry Smith #include "petscmatlab.h"
1875d382aafbSBarry Smith 
1876d382aafbSBarry Smith /*
1877d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1878d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1879d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1880d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1881e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1882d382aafbSBarry Smith */
1883d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1884d382aafbSBarry Smith 
1885d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1886d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1887d382aafbSBarry Smith #endif
1888d382aafbSBarry Smith 
18895a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18905a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1891d382aafbSBarry Smith #endif
1892d382aafbSBarry Smith 
1893d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1894d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1895d382aafbSBarry Smith #endif
1896d382aafbSBarry Smith 
1897d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1898d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1899d382aafbSBarry Smith #endif
1900d382aafbSBarry Smith 
1901d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1902d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1903d382aafbSBarry Smith #endif
1904d382aafbSBarry Smith 
1905d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1906d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1907d382aafbSBarry Smith #endif
1908d382aafbSBarry Smith 
1909d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1910d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1911d382aafbSBarry Smith #endif
1912d382aafbSBarry Smith 
1913d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1914d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1915d382aafbSBarry Smith #endif
1916d382aafbSBarry Smith 
1917d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1918d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1919d382aafbSBarry Smith #endif
1920d382aafbSBarry Smith 
1921d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1922d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1923d382aafbSBarry Smith #endif
1924d382aafbSBarry Smith 
1925d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1926d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1927d382aafbSBarry Smith #endif
1928d382aafbSBarry Smith 
1929d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1930d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1931d382aafbSBarry Smith #endif
1932d382aafbSBarry Smith 
1933d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1934d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1935d382aafbSBarry Smith #endif
1936d382aafbSBarry Smith 
1937d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1938d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1939d382aafbSBarry Smith #endif
1940d382aafbSBarry Smith 
1941d382aafbSBarry Smith #endif
1942d382aafbSBarry Smith 
1943d382aafbSBarry Smith /*
1944d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1945d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1946d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1947d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1948d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1949d382aafbSBarry Smith */
1950d382aafbSBarry Smith #if defined(__cplusplus)
1951d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1952d382aafbSBarry Smith #define EXTERN_C_END }
1953d382aafbSBarry Smith #else
1954d382aafbSBarry Smith #define EXTERN_C_BEGIN
1955d382aafbSBarry Smith #define EXTERN_C_END
1956d382aafbSBarry Smith #endif
1957d382aafbSBarry Smith 
1958d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1959d382aafbSBarry Smith 
1960d382aafbSBarry Smith /*MC
1961d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1962d382aafbSBarry Smith         communication
1963d382aafbSBarry Smith 
1964d382aafbSBarry Smith    Level: beginner
1965d382aafbSBarry Smith 
1966d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1967d382aafbSBarry Smith 
1968d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1969d382aafbSBarry Smith M*/
1970d382aafbSBarry Smith 
1971d382aafbSBarry Smith /*MC
1972d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1973d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1974d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1975d382aafbSBarry Smith 
1976d382aafbSBarry Smith 
1977d382aafbSBarry Smith    Level: beginner
1978d382aafbSBarry Smith 
1979d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1980d382aafbSBarry Smith M*/
1981d382aafbSBarry Smith 
1982d382aafbSBarry Smith /*MC
1983d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1984d382aafbSBarry Smith 
1985d382aafbSBarry Smith    Level: beginner
1986d382aafbSBarry Smith 
1987d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1988d382aafbSBarry Smith M*/
1989d382aafbSBarry Smith 
1990d382aafbSBarry Smith /*MC
1991d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1992d382aafbSBarry Smith    Level: beginner
1993d382aafbSBarry Smith 
1994d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1995d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1996d382aafbSBarry Smith 
1997d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1998d382aafbSBarry Smith M*/
1999d382aafbSBarry Smith 
2000d382aafbSBarry Smith /*MC
2001d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
2002d382aafbSBarry Smith 
2003d382aafbSBarry Smith    Level: beginner
2004d382aafbSBarry Smith 
2005d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
2006d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2007d382aafbSBarry Smith 
2008d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2009d382aafbSBarry Smith M*/
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith /*MC
2012d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2013d382aafbSBarry Smith 
2014d382aafbSBarry Smith    Level: beginner
2015d382aafbSBarry Smith 
2016d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2017d382aafbSBarry Smith           pass this value
2018d382aafbSBarry Smith 
2019d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2020d382aafbSBarry Smith M*/
2021d382aafbSBarry Smith 
2022d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2023d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2024d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2025d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2026d382aafbSBarry Smith #else
2027d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2028d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2029d382aafbSBarry Smith #endif
2030d382aafbSBarry Smith #endif
2031d382aafbSBarry Smith 
2032d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2033d382aafbSBarry Smith 
2034d382aafbSBarry Smith /* Limit MPI to 32-bits */
2035d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2036d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2037d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2038d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2039d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2040d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2041d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2042d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2043d382aafbSBarry Smith 
2044d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2045e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2046e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2047d382aafbSBarry Smith #define PetscMPIIntCast(a) (a);PetscMPIIntCheck(a)
2048d382aafbSBarry Smith #define PetscBLASIntCast(a) (a);PetscBLASIntCheck(a)
2049d382aafbSBarry Smith 
2050d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2051e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2052d382aafbSBarry Smith #define PetscHDF5IntCast(a) (a);PetscHDF5IntCheck(a)
2053d382aafbSBarry Smith #else
2054d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2055d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2056d382aafbSBarry Smith #endif
2057d382aafbSBarry Smith 
2058d382aafbSBarry Smith #else
2059d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2060d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2061d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2062d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2063d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2064d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2065d382aafbSBarry Smith #endif
2066d382aafbSBarry Smith 
2067d382aafbSBarry Smith 
2068d382aafbSBarry Smith /*
2069d382aafbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used
2070d382aafbSBarry Smith    as a regular user variable.
2071d382aafbSBarry Smith */
2072d382aafbSBarry Smith #if defined(hz)
2073d382aafbSBarry Smith #undef hz
2074d382aafbSBarry Smith #endif
2075d382aafbSBarry Smith 
2076d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2077d382aafbSBarry Smith 
2078d382aafbSBarry Smith 
2079d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2080d382aafbSBarry Smith #include <limits.h>
2081d382aafbSBarry Smith #endif
2082d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2083d382aafbSBarry Smith #include <sys/param.h>
2084d382aafbSBarry Smith #endif
2085d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2086d382aafbSBarry Smith #include <sys/types.h>
2087d382aafbSBarry Smith #endif
2088d382aafbSBarry Smith #if defined(MAXPATHLEN)
2089d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2090d382aafbSBarry Smith #elif defined(MAX_PATH)
2091d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2092d382aafbSBarry Smith #elif defined(_MAX_PATH)
2093d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2094d382aafbSBarry Smith #else
2095d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2096d382aafbSBarry Smith #endif
2097d382aafbSBarry Smith 
2098d382aafbSBarry Smith /* Special support for C++ */
2099d382aafbSBarry Smith #include "petscsys.hh"
21006c7e564aSBarry Smith 
2101d382aafbSBarry Smith 
2102d382aafbSBarry Smith /*MC
2103d382aafbSBarry Smith 
2104d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2105d382aafbSBarry Smith 
2106d382aafbSBarry Smith $    1) classic Fortran 77 style
2107d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2108d382aafbSBarry Smith $       XXX variablename
2109d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2110d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2111d382aafbSBarry Smith $
2112d382aafbSBarry Smith $    2) classic Fortran 90 style
2113d1716517SSatish Balay $#include "finclude/petscXXX.h"
2114d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2115d382aafbSBarry Smith $       XXX variablename
2116d382aafbSBarry Smith $
2117d382aafbSBarry Smith $    3) Using Fortran modules
2118d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2119d382aafbSBarry Smith $         use petscXXXX
2120d382aafbSBarry Smith $       XXX variablename
2121d382aafbSBarry Smith $
2122d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2123d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2124d382aafbSBarry Smith $         use petscXXXX
2125d382aafbSBarry Smith $       type(XXX) variablename
2126e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2127d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2128d382aafbSBarry Smith 
2129d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2130d382aafbSBarry Smith 
2131d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2132d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2133d382aafbSBarry Smith $        integer variablename
2134d382aafbSBarry Smith $
2135d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2136d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2137d382aafbSBarry Smith 
2138d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2139d382aafbSBarry Smith for only a few PETSc functions.
2140d382aafbSBarry Smith 
2141d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2142d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2143d382aafbSBarry Smith you cannot have something like
2144d382aafbSBarry Smith $      PetscInt row,col
2145d382aafbSBarry Smith $      PetscScalar val
2146d382aafbSBarry Smith $        ...
2147d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2148d382aafbSBarry Smith You must instead have
2149d382aafbSBarry Smith $      PetscInt row(1),col(1)
2150d382aafbSBarry Smith $      PetscScalar val(1)
2151d382aafbSBarry Smith $        ...
2152d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2153d382aafbSBarry Smith 
2154d382aafbSBarry Smith 
2155d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2156d382aafbSBarry Smith 
2157d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2158d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2159d382aafbSBarry Smith 
2160d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2161d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2162d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2163d382aafbSBarry Smith 
2164d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2165e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2166d382aafbSBarry Smith 
2167d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2168d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2169d382aafbSBarry Smith 
2170d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2171d382aafbSBarry Smith      automatically by "make allfortranstubs".
2172d382aafbSBarry Smith 
2173e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2174d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2175d382aafbSBarry Smith      include their predecessors
2176d382aafbSBarry Smith 
2177d382aafbSBarry Smith     Level: beginner
2178d382aafbSBarry Smith 
2179d382aafbSBarry Smith M*/
2180d382aafbSBarry Smith 
21817087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
21827087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
21837087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
21847087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
21857087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
21867087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2187d382aafbSBarry Smith 
21887087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
21897087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
21907087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
21917087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
21927087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
21937087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
21947087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
21957087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
21967087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
21977087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
21987087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
21997087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2200d382aafbSBarry Smith 
22017087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
22027087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2203d382aafbSBarry Smith 
2204d382aafbSBarry Smith /*E
2205d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2206d382aafbSBarry Smith        with an optional dynamic library name, for example
2207d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2208d382aafbSBarry Smith 
2209d382aafbSBarry Smith    Level: beginner
2210d382aafbSBarry Smith 
2211e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2212d382aafbSBarry Smith    with the option --download-sprng
2213d382aafbSBarry Smith 
2214d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
2215d382aafbSBarry Smith E*/
2216d382aafbSBarry Smith #define PetscRandomType char*
2217d382aafbSBarry Smith #define PETSCRAND       "rand"
2218d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2219d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2220d382aafbSBarry Smith 
2221d382aafbSBarry Smith /* Logging support */
22227087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2223d382aafbSBarry Smith 
22247087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2225d382aafbSBarry Smith 
2226d382aafbSBarry Smith /*S
2227d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2228d382aafbSBarry Smith 
2229d382aafbSBarry Smith    Level: intermediate
2230d382aafbSBarry Smith 
2231d382aafbSBarry Smith   Concepts: random numbers
2232d382aafbSBarry Smith 
2233d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2234d382aafbSBarry Smith S*/
2235d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2236d382aafbSBarry Smith 
2237d382aafbSBarry Smith /* Dynamic creation and loading functions */
2238d382aafbSBarry Smith extern PetscFList PetscRandomList;
2239ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2240d382aafbSBarry Smith 
22417087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22427087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22437087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
22447087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
22457087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
22467087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
22477087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
22487087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2249d382aafbSBarry Smith 
2250d382aafbSBarry Smith /*MC
2251d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2252d382aafbSBarry Smith 
2253d382aafbSBarry Smith   Synopsis:
22541890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2255d382aafbSBarry Smith 
2256d382aafbSBarry Smith   Not Collective
2257d382aafbSBarry Smith 
2258d382aafbSBarry Smith   Input Parameters:
2259d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2260d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2261d382aafbSBarry Smith . func_name   - The name of routine to create method context
2262d382aafbSBarry Smith - create_func - The creation routine itself
2263d382aafbSBarry Smith 
2264d382aafbSBarry Smith   Notes:
2265d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2266d382aafbSBarry Smith 
2267d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2268d382aafbSBarry Smith 
2269d382aafbSBarry Smith   Sample usage:
2270d382aafbSBarry Smith .vb
2271d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2272d382aafbSBarry Smith .ve
2273d382aafbSBarry Smith 
2274d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2275d382aafbSBarry Smith .vb
2276d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2277d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2278d382aafbSBarry Smith .ve
2279d382aafbSBarry Smith    or at runtime via the option
2280d382aafbSBarry Smith .vb
2281d382aafbSBarry Smith     -random_type my_random_name
2282d382aafbSBarry Smith .ve
2283d382aafbSBarry Smith 
2284d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2285d382aafbSBarry Smith 
2286d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2287d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2288d382aafbSBarry Smith 
2289d382aafbSBarry Smith   Level: advanced
2290d382aafbSBarry Smith 
2291d382aafbSBarry Smith .keywords: PetscRandom, register
2292d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2293d382aafbSBarry Smith M*/
2294d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2295d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2296d382aafbSBarry Smith #else
2297d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2298d382aafbSBarry Smith #endif
2299d382aafbSBarry Smith 
23007087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
23017087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
23027087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
23037087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
23047087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
23057087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
23067087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
23077087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
23087087cfbeSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom);
2309d382aafbSBarry Smith 
23107087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
23117087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
23127087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
23137087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
23147087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
23157087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
23167087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2317d382aafbSBarry Smith 
23187087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
23197087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
23207087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
23217087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
23227087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
23237087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
23247087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
23257087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
23267087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
23277087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
23287087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
23297087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
23307087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2331d382aafbSBarry Smith 
2332d382aafbSBarry Smith /*
2333d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2334d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2335d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2336d382aafbSBarry Smith   PetscBinarySeek().
2337d382aafbSBarry Smith */
2338d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2339d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2340d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2341d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2342d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2343d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2344d382aafbSBarry Smith 
2345d382aafbSBarry Smith /*E
2346d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2347d382aafbSBarry Smith 
2348d382aafbSBarry Smith   Level: advanced
2349d382aafbSBarry Smith 
2350d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2351d382aafbSBarry Smith E*/
2352d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
23537087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
23547087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2355d382aafbSBarry Smith 
23567087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
23577087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
23587087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
23597087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(char*);
23607087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
23617087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2362d382aafbSBarry Smith 
23637087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
23647087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
23657087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
23667087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
23677087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2368d382aafbSBarry Smith 
23697087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2370d382aafbSBarry Smith 
2371d382aafbSBarry Smith /*E
2372d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2373d382aafbSBarry Smith 
2374d382aafbSBarry Smith   Level: beginner
2375d382aafbSBarry Smith 
2376d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2377d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2378d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2379d382aafbSBarry Smith E*/
2380d382aafbSBarry Smith typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES} InsertMode;
2381d382aafbSBarry Smith 
2382d382aafbSBarry Smith /*MC
2383d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2384d382aafbSBarry Smith 
2385d382aafbSBarry Smith     Level: beginner
2386d382aafbSBarry Smith 
2387d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2388eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2389eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2390d382aafbSBarry Smith 
2391d382aafbSBarry Smith M*/
2392d382aafbSBarry Smith 
2393d382aafbSBarry Smith /*MC
2394d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2395d382aafbSBarry Smith                 value into that location
2396d382aafbSBarry Smith 
2397d382aafbSBarry Smith     Level: beginner
2398d382aafbSBarry Smith 
2399d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2400eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2401eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2402d382aafbSBarry Smith 
2403d382aafbSBarry Smith M*/
2404d382aafbSBarry Smith 
2405d382aafbSBarry Smith /*MC
2406d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2407d382aafbSBarry Smith 
2408d382aafbSBarry Smith     Level: beginner
2409d382aafbSBarry Smith 
2410d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2411d382aafbSBarry Smith 
2412d382aafbSBarry Smith M*/
2413d382aafbSBarry Smith 
2414d382aafbSBarry Smith /*S
2415d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2416d382aafbSBarry Smith 
2417d382aafbSBarry Smith    Level: advanced
2418d382aafbSBarry Smith 
2419d382aafbSBarry Smith    Concepts: communicator, create
2420d382aafbSBarry Smith S*/
2421d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2422d382aafbSBarry Smith 
2423d382aafbSBarry Smith struct _n_PetscSubcomm {
2424d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2425d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2426d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2427d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2428d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2429d382aafbSBarry Smith };
2430d382aafbSBarry Smith 
2431638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2432638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2433638faf0bSHong Zhang 
24347087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
24357087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm);
24367087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24377087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,const PetscSubcommType);
24387087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2439d382aafbSBarry Smith 
2440d382aafbSBarry Smith PETSC_EXTERN_CXX_END
24416c7e564aSBarry Smith 
2442d382aafbSBarry Smith #endif
2443