1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 111c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 121c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 131cc8b206SBarry Smith directory as the other PETSc include files. 14d382aafbSBarry Smith */ 152c8e378dSBarry Smith #include <petscconf.h> 161c77a0c5SBarry Smith #include <petscconf_poison.h> 172c8e378dSBarry Smith #include <petscfix.h> 18d382aafbSBarry Smith 1973fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2073fca5a0SBarry Smith /* 2173fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2273fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2373fca5a0SBarry Smith */ 24216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2573fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2673fca5a0SBarry Smith # endif 27216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2873fca5a0SBarry Smith # define _BSD_SOURCE 2973fca5a0SBarry Smith # endif 3007f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3107f00807SSatish Balay # define _DEFAULT_SOURCE 3207f00807SSatish Balay # endif 33ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 34ea0fecefSShri Abhyankar # define _GNU_SOURCE 35ea0fecefSShri Abhyankar # endif 3673fca5a0SBarry Smith #endif 3773fca5a0SBarry Smith 38df4397b0SStefano Zampini #include <petscsystypes.h> 39df4397b0SStefano Zampini 40d382aafbSBarry Smith /* ========================================================================== */ 41d382aafbSBarry Smith /* 422c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 43d382aafbSBarry Smith */ 441ec50b02SJed Brown #if defined(__cplusplus) 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 461ec50b02SJed Brown #else 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 481ec50b02SJed Brown #endif 49d382aafbSBarry Smith 50c5e4d11fSDmitry Karpeev /* ========================================================================== */ 51c5e4d11fSDmitry Karpeev /* 52c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 531cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 541cc8b206SBarry Smith file within an extern "C". 55c5e4d11fSDmitry Karpeev */ 56c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 57c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 58c5e4d11fSDmitry Karpeev #endif 59c5e4d11fSDmitry Karpeev 60ed938b00SJed Brown #if defined(__cplusplus) 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 62ed938b00SJed Brown #else 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 64ed938b00SJed Brown #endif 65ed938b00SJed Brown 66ed938b00SJed Brown #if defined(__cplusplus) 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 68ed938b00SJed Brown #else 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 70ed938b00SJed Brown #endif 71ed938b00SJed Brown 7258c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7358c433abSLisandro Dalcin 74ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 75014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 76014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7826703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7926703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8026703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8126703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8226703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 83014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 84014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 86d382aafbSBarry Smith #else 87014dd563SJed Brown # define PETSC_DLLEXPORT 88014dd563SJed Brown # define PETSC_DLLIMPORT 8921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 90014dd563SJed Brown #endif 91014dd563SJed Brown 92014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 94014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 96014dd563SJed Brown #endif 97014dd563SJed Brown 981cc8b206SBarry Smith /* 991cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1001cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1011cc8b206SBarry Smith used from C and are always visible in the shared libraries 1021cc8b206SBarry Smith */ 1032c280183SJed Brown #if defined(__cplusplus) 104014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 105638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10621f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 107014dd563SJed Brown #else 108014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 109638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1106258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 111d382aafbSBarry Smith #endif 11227710113SBarry Smith 113*193d546dSJacob Faibussowitsch #if defined(PETSC_USE_SINGLE_LIBRARY) 114*193d546dSJacob Faibussowitsch # define PETSC_SINGLE_LIBRARY_INTERN PETSC_INTERN 115*193d546dSJacob Faibussowitsch #else 116*193d546dSJacob Faibussowitsch # define PETSC_SINGLE_LIBRARY_INTERN PETSC_EXTERN 117*193d546dSJacob Faibussowitsch #endif 118*193d546dSJacob Faibussowitsch 119030f984aSJacob Faibussowitsch #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX11) 120030f984aSJacob Faibussowitsch # define PETSC_NULLPTR nullptr 121030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR constexpr 122030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT noexcept 123030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) noexcept(cond_) 124030f984aSJacob Faibussowitsch # define PETSC_CXX_DEFAULT(func_) func_ = default 125030f984aSJacob Faibussowitsch #else 126030f984aSJacob Faibussowitsch # define PETSC_NULLPTR NULL 127030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR 128030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT 129030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) 130030f984aSJacob Faibussowitsch # define PETSC_CXX_DEFAULT(func_) 131030f984aSJacob Faibussowitsch #endif 132030f984aSJacob Faibussowitsch 133030f984aSJacob Faibussowitsch #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX17) 134030f984aSJacob Faibussowitsch # define PETSC_NODISCARD [[nodiscard]] 135030f984aSJacob Faibussowitsch #else 136030f984aSJacob Faibussowitsch # define PETSC_NODISCARD 137030f984aSJacob Faibussowitsch #endif 138030f984aSJacob Faibussowitsch 1392c8e378dSBarry Smith #include <petscversion.h> 140a17b96a8SKyle Gerard Felker #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://petsc.org/\n" 141d382aafbSBarry Smith 142d382aafbSBarry Smith /* ========================================================================== */ 143d382aafbSBarry Smith 144d382aafbSBarry Smith /* 145d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 146d382aafbSBarry Smith 147d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 148d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 149d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 150d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 151d382aafbSBarry Smith mpicxx.h directly in their code 152d382aafbSBarry Smith */ 153fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 154d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 155fa9e63e2SJed Brown #endif 156fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 157d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 158fa9e63e2SJed Brown #endif 159e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 160e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 161e771154cSJed Brown #else 1622c8e378dSBarry Smith # include <mpi.h> 163e771154cSJed Brown #endif 16465013866SBarry Smith 1654e1ad211SJed Brown /*MC 1664e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1674e1ad211SJed Brown 1684e1ad211SJed Brown Notes: 1691393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1701393a3abSPatrick Sanan 1714e1ad211SJed Brown Typical usage is within normal code, 1724e1ad211SJed Brown 1734e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1744e1ad211SJed Brown 1754e1ad211SJed Brown but can also be used in the preprocessor, 1764e1ad211SJed Brown 1774e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1784e1ad211SJed Brown $ ... 1794e1ad211SJed Brown $ #else 1804e1ad211SJed Brown 1811393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1824e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1834e1ad211SJed Brown 1841393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1851393a3abSPatrick Sanan 1861393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1871393a3abSPatrick Sanan 1884e1ad211SJed Brown Developer Notes: 1894e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1904e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1914e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1924e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1934e1ad211SJed Brown 1944e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1954e1ad211SJed Brown implementation of variadic macros. 1964e1ad211SJed Brown 1974e1ad211SJed Brown Level: developer 1984e1ad211SJed Brown M*/ 1994e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 2004e1ad211SJed Brown # define PetscDefined_arg_1 shift, 2014e1ad211SJed Brown # define PetscDefined_arg_ shift, 2024e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 2034e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 2044e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 205c7faf32eSJacob Faibussowitsch # define PetscDefined____(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 206c7faf32eSJacob Faibussowitsch # define PetscDefined___(value) PetscDefined____(PetscDefined_arg_ ## value) 207c7faf32eSJacob Faibussowitsch # define PetscDefined__(d) PetscDefined___(d) 208c7faf32eSJacob Faibussowitsch # define PetscDefined_(d) PetscDefined__(PETSC_ ## d) 209c7faf32eSJacob Faibussowitsch # define PetscDefined(d) PetscDefined_(d) 2104e1ad211SJed Brown #endif 2114e1ad211SJed Brown 212d382aafbSBarry Smith /* 213a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 214a7886beaSBarry Smith This usually happens because 215a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 216a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 217a7886beaSBarry Smith */ 218a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 219c9b973beSBarry Smith # if !defined(MPIUNI_H) 220a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 221a7886beaSBarry Smith # endif 22241f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 22341f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 22441f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 22541f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 22641f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 22741f4af4cSSatish Balay # endif 22841f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 22941f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 23041f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 23141f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 23241f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 23341f4af4cSSatish Balay # endif 234a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 23541f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 236a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 237ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 238a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 239a7886beaSBarry Smith # endif 240a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 241a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 242a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 243ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 244c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 245a7886beaSBarry Smith # endif 246d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 247d97fd468SStefano Zampini # if !defined(MSMPI_VER) 248d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 249d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 250d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 251d97fd468SStefano Zampini # endif 252d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 253d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 254a7886beaSBarry Smith #endif 255a7886beaSBarry Smith 256a7886beaSBarry Smith /* 2572981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 258d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 259d382aafbSBarry Smith */ 260d382aafbSBarry Smith #include <stdio.h> 261d382aafbSBarry Smith 262d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 263d382aafbSBarry Smith #if !defined(MPIAPI) 264d382aafbSBarry Smith #define MPIAPI 265d382aafbSBarry Smith #endif 266d382aafbSBarry Smith 2671cc8b206SBarry Smith /* 2681cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2691cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2701cc8b206SBarry Smith does not match the actual type of the argument being passed in 2711cc8b206SBarry Smith */ 272c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 273894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 274894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2758ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2768ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 277894dd566SJed Brown # endif 278894dd566SJed Brown #endif 279894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 280894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2818ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2828ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 283894dd566SJed Brown #endif 284b3506946SBarry Smith 2855a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 286df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 287e28ce29aSPatrick Sanan 288e28ce29aSPatrick Sanan /*MC 289e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 290e28ce29aSPatrick Sanan 291e28ce29aSPatrick Sanan Notes: 292e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 293e28ce29aSPatrick Sanan 294e28ce29aSPatrick Sanan Level: beginner 295e28ce29aSPatrick Sanan 296e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 297e28ce29aSPatrick Sanan M*/ 298e28ce29aSPatrick Sanan 29937354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 300bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 301a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 302fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 303bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 304a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 305f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 306bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 307a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 308236ed0a3SSatish Balay #else 309bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 310236ed0a3SSatish Balay #endif 311b7b8f77aSBarry Smith 3127cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 313b7b8f77aSBarry Smith 314d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 315bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 316a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 317d382aafbSBarry Smith #else 318d382aafbSBarry Smith # define MPIU_INT MPI_INT 319a05e1a72SSatish Balay # define PetscInt_FMT "d" 320d382aafbSBarry Smith #endif 321d382aafbSBarry Smith 322503cfb0cSBarry Smith /* 323503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 324503cfb0cSBarry Smith */ 325e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 326d382aafbSBarry Smith 327d382aafbSBarry Smith /* 328d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 329d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 330d382aafbSBarry Smith */ 331014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 332d382aafbSBarry Smith 333d382aafbSBarry Smith /* 334d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 335d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 336d382aafbSBarry Smith */ 337014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 338d382aafbSBarry Smith 339d382aafbSBarry Smith /*MC 340d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 341d382aafbSBarry Smith 342d382aafbSBarry Smith Synopsis: 343aaa7dc30SBarry Smith #include <petscsys.h> 344ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 345d382aafbSBarry Smith 346eca87e8dSBarry Smith Not Collective 347eca87e8dSBarry Smith 348d382aafbSBarry Smith Input Parameters: 349d382aafbSBarry Smith . cond - condition or expression 350d382aafbSBarry Smith 351e28ce29aSPatrick Sanan Notes: 352e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 353d382aafbSBarry Smith branch is unlikely. 354d382aafbSBarry Smith 355d382aafbSBarry Smith Level: advanced 356d382aafbSBarry Smith 357cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 358d382aafbSBarry Smith M*/ 359d382aafbSBarry Smith 360d382aafbSBarry Smith /*MC 361d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 362d382aafbSBarry Smith 363d382aafbSBarry Smith Synopsis: 364aaa7dc30SBarry Smith #include <petscsys.h> 36523072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 366d382aafbSBarry Smith 367eca87e8dSBarry Smith Not Collective 368eca87e8dSBarry Smith 369d382aafbSBarry Smith Input Parameters: 370d382aafbSBarry Smith . cond - condition or expression 371d382aafbSBarry Smith 372e28ce29aSPatrick Sanan Notes: 373e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 374d382aafbSBarry Smith branch is likely. 375d382aafbSBarry Smith 376d382aafbSBarry Smith Level: advanced 377d382aafbSBarry Smith 378d382aafbSBarry Smith .seealso: PetscUnlikely() 379d382aafbSBarry Smith M*/ 380d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 381d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 382d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 383d382aafbSBarry Smith #else 384cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 385cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 386d382aafbSBarry Smith #endif 387d382aafbSBarry Smith 388cf9c20a2SJed Brown /*MC 389cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 390cf9c20a2SJed Brown 391cf9c20a2SJed Brown Synopsis: 392cf9c20a2SJed Brown #include <petscsys.h> 393cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 394cf9c20a2SJed Brown 395cf9c20a2SJed Brown Not Collective 396cf9c20a2SJed Brown 397cf9c20a2SJed Brown Input Parameters: 398cf9c20a2SJed Brown . cond - condition or expression 399cf9c20a2SJed Brown 400cf9c20a2SJed Brown Notes: 401cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 402cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 403cf9c20a2SJed Brown 404cf9c20a2SJed Brown Level: advanced 405cf9c20a2SJed Brown 406cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 407cf9c20a2SJed Brown M*/ 408cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 409cf9c20a2SJed Brown 410c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 411c8b9133aSSatish Balay 4125c993f7fSStefano Zampini #if defined(__NEC__) 4135c993f7fSStefano Zampini # define PetscPragmaSIMD _Pragma("_NEC ivdep") 4145c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 415c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 4161dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 417c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 418160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 419c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 420160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 421160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 422c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 423c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 424c8b9133aSSatish Balay #else 425c8b9133aSSatish Balay # define PetscPragmaSIMD 426c8b9133aSSatish Balay #endif 427c8b9133aSSatish Balay 428d382aafbSBarry Smith /* 429d382aafbSBarry Smith Declare extern C stuff after including external header files 430d382aafbSBarry Smith */ 431d382aafbSBarry Smith 4326a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 43370b3c8c7SBarry Smith 4346edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 4358b49ba18SBarry Smith /* 436390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4378b49ba18SBarry Smith */ 4388b49ba18SBarry Smith #include <petscmath.h> 4398b49ba18SBarry Smith 4406a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 441d382aafbSBarry Smith 442d382aafbSBarry Smith /*MC 4430298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 444d382aafbSBarry Smith 445d382aafbSBarry Smith Level: beginner 446d382aafbSBarry Smith 447e28ce29aSPatrick Sanan Note: 448e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 449d382aafbSBarry Smith some default 450d382aafbSBarry Smith 451e28ce29aSPatrick Sanan Fortran Notes: 452e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 453d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 454d382aafbSBarry Smith 455e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 456d382aafbSBarry Smith 457d382aafbSBarry Smith M*/ 4580298fd71SBarry Smith #define PETSC_IGNORE NULL 459d382aafbSBarry Smith 460c528d872SBarry Smith /* This is deprecated */ 461c528d872SBarry Smith #define PETSC_NULL NULL 462c528d872SBarry Smith 463d382aafbSBarry Smith /*MC 464557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 465557d4da8SBarry Smith where you wish PETSc to use the default. 466557d4da8SBarry Smith 467557d4da8SBarry Smith Level: beginner 468557d4da8SBarry Smith 469e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 470557d4da8SBarry Smith 471557d4da8SBarry Smith M*/ 472557d4da8SBarry Smith #define PETSC_DECIDE -1 473557d4da8SBarry Smith 474557d4da8SBarry Smith /*MC 475d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 476d382aafbSBarry Smith where you wish PETSc to compute the required value. 477d382aafbSBarry Smith 478d382aafbSBarry Smith Level: beginner 479d382aafbSBarry Smith 480e28ce29aSPatrick Sanan Developer Note: 481e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 482557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 483557d4da8SBarry Smith 4840298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 485d382aafbSBarry Smith 486d382aafbSBarry Smith M*/ 487d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 488d382aafbSBarry Smith 489d382aafbSBarry Smith /*MC 490557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 491557d4da8SBarry Smith where you wish PETSc to use the default. 492557d4da8SBarry Smith 493557d4da8SBarry Smith Level: beginner 494557d4da8SBarry Smith 495e28ce29aSPatrick Sanan Fortran Notes: 496e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 497557d4da8SBarry Smith 4980298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 499557d4da8SBarry Smith 500557d4da8SBarry Smith M*/ 501557d4da8SBarry Smith #define PETSC_DEFAULT -2 502557d4da8SBarry Smith 503557d4da8SBarry Smith /*MC 504d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 505ea8fe74dSBarry Smith all the processes that PETSc knows about. 506d382aafbSBarry Smith 507d382aafbSBarry Smith Level: beginner 508d382aafbSBarry Smith 509e28ce29aSPatrick Sanan Notes: 510e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 511d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 512d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 513a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 514a990b902SBarry Smith 515a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 516a990b902SBarry Smith is called because it may not have a valid value yet. 517d382aafbSBarry Smith 518d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 519d382aafbSBarry Smith 520d382aafbSBarry Smith M*/ 521014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 522d382aafbSBarry Smith 523d382aafbSBarry Smith /*MC 524503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 525d382aafbSBarry Smith 526d382aafbSBarry Smith Level: beginner 527d382aafbSBarry Smith 528e28ce29aSPatrick Sanan Notes: 529e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 530a990b902SBarry Smith 531d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 532d382aafbSBarry Smith 533d382aafbSBarry Smith M*/ 534d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 535d382aafbSBarry Smith 5366de5d289SStefano Zampini /*MC 5376de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5386de5d289SStefano Zampini MPI with MPI_Init_thread. 5396de5d289SStefano Zampini 5406de5d289SStefano Zampini Level: beginner 5416de5d289SStefano Zampini 5426de5d289SStefano Zampini Notes: 5436de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5446de5d289SStefano Zampini 5456de5d289SStefano Zampini .seealso: PetscInitialize() 5466de5d289SStefano Zampini 5476de5d289SStefano Zampini M*/ 5486de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5496de5d289SStefano Zampini 550d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5518ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 552014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 553014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5544cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 555d382aafbSBarry Smith 556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 559d382aafbSBarry Smith 5607381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 56105035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 562cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5633c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5647381773fSBarry Smith #endif 5657381773fSBarry Smith 56605035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 56705035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 56805035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5693c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 57005035670SJunchao Zhang #endif 57105035670SJunchao Zhang 57259e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 57359e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 57459e55d94SJunchao Zhang #endif 57559e55d94SJunchao Zhang 57671438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 57771438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 57871438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 57971438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 58071438e86SJunchao Zhang #endif 58171438e86SJunchao Zhang 582540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 583540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 584540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 585540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 586540e20f2SPierre Jolivet #endif 587540e20f2SPierre Jolivet 588d382aafbSBarry Smith /*MC 58995dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 590d382aafbSBarry Smith 591eca87e8dSBarry Smith Synopsis: 592aaa7dc30SBarry Smith #include <petscsys.h> 593eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 594eca87e8dSBarry Smith 595eca87e8dSBarry Smith Not Collective 596eca87e8dSBarry Smith 597d382aafbSBarry Smith Input Parameter: 598d382aafbSBarry Smith . m - number of bytes to allocate 599d382aafbSBarry Smith 600d382aafbSBarry Smith Output Parameter: 601d382aafbSBarry Smith . result - memory allocated 602d382aafbSBarry Smith 603d382aafbSBarry Smith Level: beginner 604d382aafbSBarry Smith 60549d7da52SJed Brown Notes: 60649d7da52SJed Brown Memory is always allocated at least double aligned 607d382aafbSBarry Smith 60849d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 609d382aafbSBarry Smith 610d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 611d382aafbSBarry Smith 612d382aafbSBarry Smith M*/ 613071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 614d382aafbSBarry Smith 615d382aafbSBarry Smith /*MC 6163221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 6173221ece2SMatthew G. Knepley 6183221ece2SMatthew G. Knepley Synopsis: 6193221ece2SMatthew G. Knepley #include <petscsys.h> 6203221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 6213221ece2SMatthew G. Knepley 6223221ece2SMatthew G. Knepley Not Collective 6233221ece2SMatthew G. Knepley 6243221ece2SMatthew G. Knepley Input Parameters: 6253221ece2SMatthew G. Knepley + m - number of bytes to allocate 62692f119d6SBarry Smith - result - previous memory 6273221ece2SMatthew G. Knepley 6283221ece2SMatthew G. Knepley Output Parameter: 6293221ece2SMatthew G. Knepley . result - new memory allocated 6303221ece2SMatthew G. Knepley 6313221ece2SMatthew G. Knepley Level: developer 6323221ece2SMatthew G. Knepley 6333221ece2SMatthew G. Knepley Notes: 6343221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6353221ece2SMatthew G. Knepley 6363221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6373221ece2SMatthew G. Knepley 6383221ece2SMatthew G. Knepley M*/ 6393221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6403221ece2SMatthew G. Knepley 6413221ece2SMatthew G. Knepley /*MC 642503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 643d382aafbSBarry Smith 644d382aafbSBarry Smith Synopsis: 645aaa7dc30SBarry Smith #include <petscsys.h> 646d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 647d382aafbSBarry Smith 648eca87e8dSBarry Smith Not Collective 649eca87e8dSBarry Smith 650eca87e8dSBarry Smith Input Parameters: 651eca87e8dSBarry Smith . addr - address to align (any pointer type) 652eca87e8dSBarry Smith 653d382aafbSBarry Smith Level: developer 654d382aafbSBarry Smith 655d382aafbSBarry Smith .seealso: PetscMallocAlign() 656d382aafbSBarry Smith 657d382aafbSBarry Smith M*/ 658d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 659d382aafbSBarry Smith 660d382aafbSBarry Smith /*MC 6618f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 6628f51dc47SJunchao Zhang 6638f51dc47SJunchao Zhang Synopsis: 6648f51dc47SJunchao Zhang #include <petscsys.h> 6658f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 6668f51dc47SJunchao Zhang 6678f51dc47SJunchao Zhang Not Collective 6688f51dc47SJunchao Zhang 6698f51dc47SJunchao Zhang Input Parameter: 6708f51dc47SJunchao Zhang . m - number of bytes to allocate 6718f51dc47SJunchao Zhang 6728f51dc47SJunchao Zhang Output Parameter: 6738f51dc47SJunchao Zhang . result - memory allocated 6748f51dc47SJunchao Zhang 6758f51dc47SJunchao Zhang Level: beginner 6768f51dc47SJunchao Zhang 6778f51dc47SJunchao Zhang Notes: 6788f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 6798f51dc47SJunchao Zhang 6808f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 6818f51dc47SJunchao Zhang 6828f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 6838f51dc47SJunchao Zhang 6848f51dc47SJunchao Zhang M*/ 6858f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 6868f51dc47SJunchao Zhang 6878f51dc47SJunchao Zhang /*MC 688785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 689d382aafbSBarry Smith 690eca87e8dSBarry Smith Synopsis: 691aaa7dc30SBarry Smith #include <petscsys.h> 692785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 693785e854fSJed Brown 694785e854fSJed Brown Not Collective 695785e854fSJed Brown 696785e854fSJed Brown Input Parameter: 697390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 698785e854fSJed Brown 699785e854fSJed Brown Output Parameter: 7001fe1b817SJunchao Zhang . r1 - memory allocated 701785e854fSJed Brown 702e28ce29aSPatrick Sanan Note: 703e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 704390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 705390e1bf2SBarry Smith $ PetscInt *id; 706390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 707390e1bf2SBarry Smith not 708390e1bf2SBarry Smith $ PetscInt *id; 709390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 710390e1bf2SBarry Smith 7111fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 712390e1bf2SBarry Smith 713390e1bf2SBarry Smith Level: beginner 714785e854fSJed Brown 7151795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 716785e854fSJed Brown 717785e854fSJed Brown M*/ 7182553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 719785e854fSJed Brown 720785e854fSJed Brown /*MC 7211795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 7221795a4d1SJed Brown 7231795a4d1SJed Brown Synopsis: 724aaa7dc30SBarry Smith #include <petscsys.h> 7251795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 7261795a4d1SJed Brown 7271795a4d1SJed Brown Not Collective 7281795a4d1SJed Brown 7291795a4d1SJed Brown Input Parameter: 7301795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7311795a4d1SJed Brown 7321795a4d1SJed Brown Output Parameter: 7331fe1b817SJunchao Zhang . r1 - memory allocated 7341795a4d1SJed Brown 735e28ce29aSPatrick Sanan Notes: 736e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 737390e1bf2SBarry Smith 738390e1bf2SBarry Smith Level: beginner 7391795a4d1SJed Brown 7401795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7411795a4d1SJed Brown 7421795a4d1SJed Brown M*/ 7432553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7441795a4d1SJed Brown 7451795a4d1SJed Brown /*MC 746dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 747d382aafbSBarry Smith 748eca87e8dSBarry Smith Synopsis: 749aaa7dc30SBarry Smith #include <petscsys.h> 750dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 751eca87e8dSBarry Smith 752eca87e8dSBarry Smith Not Collective 753eca87e8dSBarry Smith 754d8d19677SJose E. Roman Input Parameters: 755d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 756dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 757d382aafbSBarry Smith 758d8d19677SJose E. Roman Output Parameters: 759d382aafbSBarry Smith + r1 - memory allocated in first chunk 760d382aafbSBarry Smith - r2 - memory allocated in second chunk 761d382aafbSBarry Smith 762d382aafbSBarry Smith Level: developer 763d382aafbSBarry Smith 7641795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 765d382aafbSBarry Smith 766d382aafbSBarry Smith M*/ 7672553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 768d382aafbSBarry Smith 769d382aafbSBarry Smith /*MC 7701795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 771d382aafbSBarry Smith 772eca87e8dSBarry Smith Synopsis: 773aaa7dc30SBarry Smith #include <petscsys.h> 7741795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 775eca87e8dSBarry Smith 776eca87e8dSBarry Smith Not Collective 777eca87e8dSBarry Smith 778d8d19677SJose E. Roman Input Parameters: 779d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7801795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7811795a4d1SJed Brown 782d8d19677SJose E. Roman Output Parameters: 7831795a4d1SJed Brown + r1 - memory allocated in first chunk 7841795a4d1SJed Brown - r2 - memory allocated in second chunk 7851795a4d1SJed Brown 7861795a4d1SJed Brown Level: developer 7871795a4d1SJed Brown 7881795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7891795a4d1SJed Brown 7901795a4d1SJed Brown M*/ 7912553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7921795a4d1SJed Brown 7931795a4d1SJed Brown /*MC 794dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 795d382aafbSBarry Smith 796d382aafbSBarry Smith Synopsis: 797aaa7dc30SBarry Smith #include <petscsys.h> 798dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 799d382aafbSBarry Smith 800d382aafbSBarry Smith Not Collective 801d382aafbSBarry Smith 802d8d19677SJose E. Roman Input Parameters: 803d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 804d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 805dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 806d382aafbSBarry Smith 807d8d19677SJose E. Roman Output Parameters: 808d382aafbSBarry Smith + r1 - memory allocated in first chunk 809d382aafbSBarry Smith . r2 - memory allocated in second chunk 810d382aafbSBarry Smith - r3 - memory allocated in third chunk 811d382aafbSBarry Smith 812d382aafbSBarry Smith Level: developer 813d382aafbSBarry Smith 8141795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 815d382aafbSBarry Smith 816d382aafbSBarry Smith M*/ 8172553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 818d382aafbSBarry Smith 819d382aafbSBarry Smith /*MC 8201795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 821d382aafbSBarry Smith 822eca87e8dSBarry Smith Synopsis: 823aaa7dc30SBarry Smith #include <petscsys.h> 8241795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 825eca87e8dSBarry Smith 826eca87e8dSBarry Smith Not Collective 827eca87e8dSBarry Smith 828d8d19677SJose E. Roman Input Parameters: 829d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 830d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8311795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8321795a4d1SJed Brown 833d8d19677SJose E. Roman Output Parameters: 8341795a4d1SJed Brown + r1 - memory allocated in first chunk 8351795a4d1SJed Brown . r2 - memory allocated in second chunk 8361795a4d1SJed Brown - r3 - memory allocated in third chunk 8371795a4d1SJed Brown 8381795a4d1SJed Brown Level: developer 8391795a4d1SJed Brown 8401795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8411795a4d1SJed Brown 8421795a4d1SJed Brown M*/ 8432553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8441795a4d1SJed Brown 8451795a4d1SJed Brown /*MC 846dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 847d382aafbSBarry Smith 848d382aafbSBarry Smith Synopsis: 849aaa7dc30SBarry Smith #include <petscsys.h> 850dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 851d382aafbSBarry Smith 852d382aafbSBarry Smith Not Collective 853d382aafbSBarry Smith 854d8d19677SJose E. Roman Input Parameters: 855d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 856d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 857d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 858dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 859d382aafbSBarry Smith 860d8d19677SJose E. Roman Output Parameters: 861d382aafbSBarry Smith + r1 - memory allocated in first chunk 862d382aafbSBarry Smith . r2 - memory allocated in second chunk 863d382aafbSBarry Smith . r3 - memory allocated in third chunk 864d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 865d382aafbSBarry Smith 866d382aafbSBarry Smith Level: developer 867d382aafbSBarry Smith 8681795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 869d382aafbSBarry Smith 870d382aafbSBarry Smith M*/ 8712553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 872d382aafbSBarry Smith 873d382aafbSBarry Smith /*MC 8741795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 875d382aafbSBarry Smith 876eca87e8dSBarry Smith Synopsis: 877aaa7dc30SBarry Smith #include <petscsys.h> 8781795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 879eca87e8dSBarry Smith 880eca87e8dSBarry Smith Not Collective 881eca87e8dSBarry Smith 882e28ce29aSPatrick Sanan Input Parameters: 883d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 884d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 885d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8861795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8871795a4d1SJed Brown 888e28ce29aSPatrick Sanan Output Parameters: 8891795a4d1SJed Brown + r1 - memory allocated in first chunk 8901795a4d1SJed Brown . r2 - memory allocated in second chunk 8911795a4d1SJed Brown . r3 - memory allocated in third chunk 8921795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8931795a4d1SJed Brown 8941795a4d1SJed Brown Level: developer 8951795a4d1SJed Brown 8961795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8971795a4d1SJed Brown 8981795a4d1SJed Brown M*/ 8992553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 9001795a4d1SJed Brown 9011795a4d1SJed Brown /*MC 902dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 903d382aafbSBarry Smith 904d382aafbSBarry Smith Synopsis: 905aaa7dc30SBarry Smith #include <petscsys.h> 906dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 907d382aafbSBarry Smith 908d382aafbSBarry Smith Not Collective 909d382aafbSBarry Smith 910e28ce29aSPatrick Sanan Input Parameters: 911d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 912d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 913d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 914d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 915dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 916d382aafbSBarry Smith 917e28ce29aSPatrick Sanan Output Parameters: 918d382aafbSBarry Smith + r1 - memory allocated in first chunk 919d382aafbSBarry Smith . r2 - memory allocated in second chunk 920d382aafbSBarry Smith . r3 - memory allocated in third chunk 921d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 922d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 923d382aafbSBarry Smith 924d382aafbSBarry Smith Level: developer 925d382aafbSBarry Smith 9261795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 927d382aafbSBarry Smith 928d382aafbSBarry Smith M*/ 9292553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 930d382aafbSBarry Smith 931d382aafbSBarry Smith /*MC 9321795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 933d382aafbSBarry Smith 934eca87e8dSBarry Smith Synopsis: 935aaa7dc30SBarry Smith #include <petscsys.h> 9361795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 937eca87e8dSBarry Smith 938eca87e8dSBarry Smith Not Collective 939eca87e8dSBarry Smith 940e28ce29aSPatrick Sanan Input Parameters: 941d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 942d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 943d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 944d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9451795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9461795a4d1SJed Brown 947e28ce29aSPatrick Sanan Output Parameters: 9481795a4d1SJed Brown + r1 - memory allocated in first chunk 9491795a4d1SJed Brown . r2 - memory allocated in second chunk 9501795a4d1SJed Brown . r3 - memory allocated in third chunk 9511795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9521795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9531795a4d1SJed Brown 9541795a4d1SJed Brown Level: developer 9551795a4d1SJed Brown 9561795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9571795a4d1SJed Brown 9581795a4d1SJed Brown M*/ 9592553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 960d382aafbSBarry Smith 961d382aafbSBarry Smith /*MC 962dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 963d382aafbSBarry Smith 964d382aafbSBarry Smith Synopsis: 965aaa7dc30SBarry Smith #include <petscsys.h> 966dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 967d382aafbSBarry Smith 968d382aafbSBarry Smith Not Collective 969d382aafbSBarry Smith 970e28ce29aSPatrick Sanan Input Parameters: 971d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 972d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 973d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 974d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 975d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 976dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 977d382aafbSBarry Smith 978e28ce29aSPatrick Sanan Output Parameteasr: 979d382aafbSBarry Smith + r1 - memory allocated in first chunk 980d382aafbSBarry Smith . r2 - memory allocated in second chunk 981d382aafbSBarry Smith . r3 - memory allocated in third chunk 982d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 983d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 984d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 985d382aafbSBarry Smith 986d382aafbSBarry Smith Level: developer 987d382aafbSBarry Smith 9881795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 989d382aafbSBarry Smith 990d382aafbSBarry Smith M*/ 9912553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 992d382aafbSBarry Smith 993d382aafbSBarry Smith /*MC 9941795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 995d382aafbSBarry Smith 996eca87e8dSBarry Smith Synopsis: 997aaa7dc30SBarry Smith #include <petscsys.h> 9981795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 999eca87e8dSBarry Smith 1000eca87e8dSBarry Smith Not Collective 1001eca87e8dSBarry Smith 1002e28ce29aSPatrick Sanan Input Parameters: 1003d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1004d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1005d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1006d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1007d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 10081795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 10091795a4d1SJed Brown 1010e28ce29aSPatrick Sanan Output Parameters: 10111795a4d1SJed Brown + r1 - memory allocated in first chunk 10121795a4d1SJed Brown . r2 - memory allocated in second chunk 10131795a4d1SJed Brown . r3 - memory allocated in third chunk 10141795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10151795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10161795a4d1SJed Brown - r6 - memory allocated in sixth chunk 10171795a4d1SJed Brown 10181795a4d1SJed Brown Level: developer 10191795a4d1SJed Brown 10201795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 10211795a4d1SJed Brown 10221795a4d1SJed Brown M*/ 10232553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 10241795a4d1SJed Brown 10251795a4d1SJed Brown /*MC 1026dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 1027d382aafbSBarry Smith 1028d382aafbSBarry Smith Synopsis: 1029aaa7dc30SBarry Smith #include <petscsys.h> 1030dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1031d382aafbSBarry Smith 1032d382aafbSBarry Smith Not Collective 1033d382aafbSBarry Smith 1034e28ce29aSPatrick Sanan Input Parameters: 1035d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1036d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1037d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1038d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1039d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1040d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1041dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1042d382aafbSBarry Smith 1043e28ce29aSPatrick Sanan Output Parameters: 1044d382aafbSBarry Smith + r1 - memory allocated in first chunk 1045d382aafbSBarry Smith . r2 - memory allocated in second chunk 1046d382aafbSBarry Smith . r3 - memory allocated in third chunk 1047d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1048d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1049d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1050eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1051d382aafbSBarry Smith 1052d382aafbSBarry Smith Level: developer 1053d382aafbSBarry Smith 10541795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1055d382aafbSBarry Smith 1056d382aafbSBarry Smith M*/ 10572553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1058d382aafbSBarry Smith 1059d382aafbSBarry Smith /*MC 10601795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10611795a4d1SJed Brown 10621795a4d1SJed Brown Synopsis: 1063aaa7dc30SBarry Smith #include <petscsys.h> 10641795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10651795a4d1SJed Brown 10661795a4d1SJed Brown Not Collective 10671795a4d1SJed Brown 1068e28ce29aSPatrick Sanan Input Parameters: 10691795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10701795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10711795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10721795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10731795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10741795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10751795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10761795a4d1SJed Brown 1077e28ce29aSPatrick Sanan Output Parameters: 10781795a4d1SJed Brown + r1 - memory allocated in first chunk 10791795a4d1SJed Brown . r2 - memory allocated in second chunk 10801795a4d1SJed Brown . r3 - memory allocated in third chunk 10811795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10821795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10831795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10841795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10851795a4d1SJed Brown 10861795a4d1SJed Brown Level: developer 10871795a4d1SJed Brown 10881795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10891795a4d1SJed Brown 10901795a4d1SJed Brown M*/ 10912553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10921795a4d1SJed Brown 10931795a4d1SJed Brown /*MC 1094503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1095d382aafbSBarry Smith 1096eca87e8dSBarry Smith Synopsis: 1097aaa7dc30SBarry Smith #include <petscsys.h> 1098b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1099eca87e8dSBarry Smith 1100eca87e8dSBarry Smith Not Collective 1101eca87e8dSBarry Smith 1102d382aafbSBarry Smith Output Parameter: 1103b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1104d382aafbSBarry Smith 1105d382aafbSBarry Smith Level: beginner 1106d382aafbSBarry Smith 1107390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1108d382aafbSBarry Smith 1109d382aafbSBarry Smith M*/ 1110b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1111ad0619ddSBarry Smith 1112ad0619ddSBarry Smith /*MC 1113b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1114ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1115ad0619ddSBarry Smith 1116ad0619ddSBarry Smith Synopsis: 1117aaa7dc30SBarry Smith #include <petscsys.h> 1118b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1119ad0619ddSBarry Smith 1120ad0619ddSBarry Smith Not Collective 1121ad0619ddSBarry Smith 1122ad0619ddSBarry Smith Input Parameter: 1123b00a9115SJed Brown . obj - object memory is logged to 1124ad0619ddSBarry Smith 1125ad0619ddSBarry Smith Output Parameter: 1126b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1127ad0619ddSBarry Smith 1128ad0619ddSBarry Smith Level: developer 1129ad0619ddSBarry Smith 1130390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1131ad0619ddSBarry Smith 1132ad0619ddSBarry Smith M*/ 1133d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1134d382aafbSBarry Smith 1135d382aafbSBarry Smith /*MC 1136d382aafbSBarry Smith PetscFree - Frees memory 1137d382aafbSBarry Smith 1138eca87e8dSBarry Smith Synopsis: 1139aaa7dc30SBarry Smith #include <petscsys.h> 1140eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1141eca87e8dSBarry Smith 1142eca87e8dSBarry Smith Not Collective 1143eca87e8dSBarry Smith 1144d382aafbSBarry Smith Input Parameter: 11457f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1146d382aafbSBarry Smith 1147d382aafbSBarry Smith Level: beginner 1148d382aafbSBarry Smith 114949d7da52SJed Brown Notes: 1150390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1151390e1bf2SBarry Smith 115249d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1153d382aafbSBarry Smith 1154390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1155d382aafbSBarry Smith 1156d382aafbSBarry Smith M*/ 1157ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1158d382aafbSBarry Smith 1159d382aafbSBarry Smith /*MC 1160d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1161d382aafbSBarry Smith 1162eca87e8dSBarry Smith Synopsis: 1163aaa7dc30SBarry Smith #include <petscsys.h> 1164eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1165eca87e8dSBarry Smith 1166eca87e8dSBarry Smith Not Collective 1167eca87e8dSBarry Smith 1168e28ce29aSPatrick Sanan Input Parameters: 1169d382aafbSBarry Smith + memory1 - memory to free 1170d382aafbSBarry Smith - memory2 - 2nd memory to free 1171d382aafbSBarry Smith 1172d382aafbSBarry Smith Level: developer 1173d382aafbSBarry Smith 117495452b02SPatrick Sanan Notes: 117595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1176d382aafbSBarry Smith 1177d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1178d382aafbSBarry Smith 1179d382aafbSBarry Smith M*/ 1180ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1181d382aafbSBarry Smith 1182d382aafbSBarry Smith /*MC 1183d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1184d382aafbSBarry Smith 1185eca87e8dSBarry Smith Synopsis: 1186aaa7dc30SBarry Smith #include <petscsys.h> 1187eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1188eca87e8dSBarry Smith 1189eca87e8dSBarry Smith Not Collective 1190eca87e8dSBarry Smith 1191e28ce29aSPatrick Sanan Input Parameters: 1192d382aafbSBarry Smith + memory1 - memory to free 1193d382aafbSBarry Smith . memory2 - 2nd memory to free 1194d382aafbSBarry Smith - memory3 - 3rd memory to free 1195d382aafbSBarry Smith 1196d382aafbSBarry Smith Level: developer 1197d382aafbSBarry Smith 119895452b02SPatrick Sanan Notes: 119995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1200d382aafbSBarry Smith 1201d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1202d382aafbSBarry Smith 1203d382aafbSBarry Smith M*/ 1204ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1205d382aafbSBarry Smith 1206d382aafbSBarry Smith /*MC 1207d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1208d382aafbSBarry Smith 1209eca87e8dSBarry Smith Synopsis: 1210aaa7dc30SBarry Smith #include <petscsys.h> 1211eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1212eca87e8dSBarry Smith 1213eca87e8dSBarry Smith Not Collective 1214eca87e8dSBarry Smith 1215e28ce29aSPatrick Sanan Input Parameters: 1216d382aafbSBarry Smith + m1 - memory to free 1217d382aafbSBarry Smith . m2 - 2nd memory to free 1218d382aafbSBarry Smith . m3 - 3rd memory to free 1219d382aafbSBarry Smith - m4 - 4th memory to free 1220d382aafbSBarry Smith 1221d382aafbSBarry Smith Level: developer 1222d382aafbSBarry Smith 122395452b02SPatrick Sanan Notes: 122495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1225d382aafbSBarry Smith 1226d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1227d382aafbSBarry Smith 1228d382aafbSBarry Smith M*/ 1229ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1230d382aafbSBarry Smith 1231d382aafbSBarry Smith /*MC 1232d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1233d382aafbSBarry Smith 1234eca87e8dSBarry Smith Synopsis: 1235aaa7dc30SBarry Smith #include <petscsys.h> 1236eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1237eca87e8dSBarry Smith 1238eca87e8dSBarry Smith Not Collective 1239eca87e8dSBarry Smith 1240e28ce29aSPatrick Sanan Input Parameters: 1241d382aafbSBarry Smith + m1 - memory to free 1242d382aafbSBarry Smith . m2 - 2nd memory to free 1243d382aafbSBarry Smith . m3 - 3rd memory to free 1244d382aafbSBarry Smith . m4 - 4th memory to free 1245d382aafbSBarry Smith - m5 - 5th memory to free 1246d382aafbSBarry Smith 1247d382aafbSBarry Smith Level: developer 1248d382aafbSBarry Smith 124995452b02SPatrick Sanan Notes: 125095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1251d382aafbSBarry Smith 1252d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1253d382aafbSBarry Smith 1254d382aafbSBarry Smith M*/ 1255ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1256d382aafbSBarry Smith 1257d382aafbSBarry Smith /*MC 1258d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1259d382aafbSBarry Smith 1260eca87e8dSBarry Smith Synopsis: 1261aaa7dc30SBarry Smith #include <petscsys.h> 1262eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1263eca87e8dSBarry Smith 1264eca87e8dSBarry Smith Not Collective 1265eca87e8dSBarry Smith 1266e28ce29aSPatrick Sanan Input Parameters: 1267d382aafbSBarry Smith + m1 - memory to free 1268d382aafbSBarry Smith . m2 - 2nd memory to free 1269d382aafbSBarry Smith . m3 - 3rd memory to free 1270d382aafbSBarry Smith . m4 - 4th memory to free 1271d382aafbSBarry Smith . m5 - 5th memory to free 1272d382aafbSBarry Smith - m6 - 6th memory to free 1273d382aafbSBarry Smith 1274d382aafbSBarry Smith Level: developer 1275d382aafbSBarry Smith 127695452b02SPatrick Sanan Notes: 127795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1278d382aafbSBarry Smith 1279d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1280d382aafbSBarry Smith 1281d382aafbSBarry Smith M*/ 1282ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1283d382aafbSBarry Smith 1284d382aafbSBarry Smith /*MC 1285d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1286d382aafbSBarry Smith 1287eca87e8dSBarry Smith Synopsis: 1288aaa7dc30SBarry Smith #include <petscsys.h> 1289eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1290eca87e8dSBarry Smith 1291eca87e8dSBarry Smith Not Collective 1292eca87e8dSBarry Smith 1293e28ce29aSPatrick Sanan Input Parameters: 1294d382aafbSBarry Smith + m1 - memory to free 1295d382aafbSBarry Smith . m2 - 2nd memory to free 1296d382aafbSBarry Smith . m3 - 3rd memory to free 1297d382aafbSBarry Smith . m4 - 4th memory to free 1298d382aafbSBarry Smith . m5 - 5th memory to free 1299d382aafbSBarry Smith . m6 - 6th memory to free 1300d382aafbSBarry Smith - m7 - 7th memory to free 1301d382aafbSBarry Smith 1302d382aafbSBarry Smith Level: developer 1303d382aafbSBarry Smith 130495452b02SPatrick Sanan Notes: 130595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1306d382aafbSBarry Smith 1307d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1308d382aafbSBarry Smith PetscMalloc7() 1309d382aafbSBarry Smith 1310d382aafbSBarry Smith M*/ 1311ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1312d382aafbSBarry Smith 1313ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1314ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1315071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1316efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 13173221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1318ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 131992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1321d382aafbSBarry Smith 1322d382aafbSBarry Smith /* 1323c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1324c1706be6SHong Zhang */ 1325c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1326c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 132731f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 132831f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 132931f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 133031f06eaaSHong Zhang #endif 133159af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 133259af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 133359af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 133459af0bd3SScott Kruger #endif 133559af0bd3SScott Kruger 1336a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 133736763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1338a5057860SBarry Smith 1339a5057860SBarry Smith /* 134066d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1341d382aafbSBarry Smith */ 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 134392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1346e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1347e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 134892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 134992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1350efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 135192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 135292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1353608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1354608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1355d382aafbSBarry Smith 13566a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13608e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1361d382aafbSBarry Smith 1362d382aafbSBarry Smith /* 1363d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1364d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1365d382aafbSBarry Smith functionality and/or error checking. 1366d382aafbSBarry Smith */ 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1369d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1377a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13812f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13862c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 138947340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13906fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13916991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13926991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1394d382aafbSBarry Smith 1395573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1396573b0fb4SBarry Smith 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1400d382aafbSBarry Smith 1401e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1402a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1403a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1404a53986e1SJed Brown 1405d382aafbSBarry Smith /* 1406d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1407d382aafbSBarry Smith */ 1408367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1409570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1410de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1411014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1412014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1413d9822059SBarry Smith #else 1414de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1415d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1416d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1417d9822059SBarry Smith #endif 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1419d382aafbSBarry Smith 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1422eb3f98d2SBarry Smith 142395c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1424d6a4318aSJed Brown 1425639ff905SBarry Smith /* 1426639ff905SBarry Smith Defines PETSc error handling. 1427639ff905SBarry Smith */ 1428639ff905SBarry Smith #include <petscerror.h> 1429d382aafbSBarry Smith 14300700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1431014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1432014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 143481256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 143581256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 143681256985SMatthew G. Knepley 1437d382aafbSBarry Smith /* 1438d382aafbSBarry Smith Routines that get memory usage information from the OS 1439d382aafbSBarry Smith */ 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1443b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1444d382aafbSBarry Smith 1445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1446d382aafbSBarry Smith 1447d382aafbSBarry Smith /* 1448d382aafbSBarry Smith Initialization of PETSc 1449d382aafbSBarry Smith */ 1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1460d382aafbSBarry Smith 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1462607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1463d382aafbSBarry Smith 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1468d382aafbSBarry Smith 1469a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1470a50e088cSMatthew G. Knepley 1471d382aafbSBarry Smith /* 1472d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14732981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1474d382aafbSBarry Smith */ 1475638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1476638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1477638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1478d382aafbSBarry Smith 1479d382aafbSBarry Smith /* 1480d382aafbSBarry Smith Functions that can act on any PETSc object. 1481d382aafbSBarry Smith */ 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1500bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1501bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 15040eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 15050eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1507d382aafbSBarry Smith 1508665c2dedSJed Brown #include <petscviewertypes.h> 1509639ff905SBarry Smith #include <petscoptions.h> 1510639ff905SBarry Smith 1511608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1512608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1513608c71bfSMatthew G. Knepley 15140633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 15150633abcbSJed Brown 1516c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1517dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1518639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 15190005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 15200005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1528685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15314099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1533b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1536d382aafbSBarry Smith 1537e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15387aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1539e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1540e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1541e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1542e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1543e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1544e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1545e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1546e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1547e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 154815681b3cSBarry Smith 1549ec7429eaSBarry Smith #else 15507aab2a10SBarry Smith #define PetscSAWsBlock() 0 1551e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1552e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1553e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1554e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1555e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1556e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1557e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1558e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1559e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 156015681b3cSBarry Smith 1561ec7429eaSBarry Smith #endif 1562b90c6cbeSBarry Smith 156382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 156482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 156582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1566258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1567258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1568258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1569258ec3d2SMatthew G. Knepley #endif 15707d5d4d99SBarry Smith 15715fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1572a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15735fe58b6fSBarry Smith #endif 15747eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1575a64a8e02SBarry Smith 1576140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1577140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1578140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1579140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1580140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1581140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1582d382aafbSBarry Smith 1583d382aafbSBarry Smith /* 1584503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1585d382aafbSBarry Smith link libraries that will be loaded as needed. 1586d382aafbSBarry Smith */ 1587a240a19fSJed Brown 1588a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1589a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1590140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15911c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15921c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 159344ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1594140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1595140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1596140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1597d382aafbSBarry Smith 1598014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1606d382aafbSBarry Smith 1607d382aafbSBarry Smith /* 1608d382aafbSBarry Smith Useful utility routines 1609d382aafbSBarry Smith */ 1610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1612d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1617dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[2],PetscInt[2]); 1618dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[2],PetscReal[2]); 1619d382aafbSBarry Smith 162064ac3b0dSPatrick Sanan /*MC 1621ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1622503cfb0cSBarry Smith 1623e28ce29aSPatrick Sanan Notes: 1624e28ce29aSPatrick Sanan This is useful in cases like 1625503cfb0cSBarry Smith $ int *a; 1626ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 16271cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 162864ac3b0dSPatrick Sanan 162964ac3b0dSPatrick Sanan Level: beginner 163064ac3b0dSPatrick Sanan 163164ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 163264ac3b0dSPatrick Sanan M*/ 1633d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1634503cfb0cSBarry Smith 1635d382aafbSBarry Smith /*MC 1636d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1637d382aafbSBarry Smith 1638d382aafbSBarry Smith Synopsis: 1639aaa7dc30SBarry Smith #include <petscsys.h> 1640659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1641d382aafbSBarry Smith 1642659f7ba0SBarry Smith Collective on comm 1643eca87e8dSBarry Smith 1644d382aafbSBarry Smith Input Parameters: 1645659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1646d382aafbSBarry Smith . format - the usual printf() format string 1647659f7ba0SBarry Smith - args - arguments to be printed 1648d382aafbSBarry Smith 1649d382aafbSBarry Smith Level: developer 1650d382aafbSBarry Smith 1651d382aafbSBarry Smith Fortran Note: 1652d382aafbSBarry Smith This routine is not supported in Fortran. 1653d382aafbSBarry Smith 1654659f7ba0SBarry Smith Note: 1655659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1656659f7ba0SBarry Smith 1657659f7ba0SBarry Smith To use, write your own function, for example, 1658659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1659659f7ba0SBarry Smith ${ 1660659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1661659f7ba0SBarry Smith $} 1662659f7ba0SBarry Smith then do the assigment 1663659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1664659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1665659f7ba0SBarry Smith 1666659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1667d382aafbSBarry Smith 1668d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1669d382aafbSBarry Smith M*/ 1670014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1671d382aafbSBarry Smith 1672fcfd50ebSBarry Smith /* 1673fcfd50ebSBarry Smith Defines PETSc profiling. 1674fcfd50ebSBarry Smith */ 16752c8e378dSBarry Smith #include <petsclog.h> 1676fcfd50ebSBarry Smith 1677fcfd50ebSBarry Smith /* 1678fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1679fcfd50ebSBarry Smith */ 1680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1686014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16871b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1688fcfd50ebSBarry Smith 1689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1692d382aafbSBarry Smith 1693d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1694d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1695d781fa04SBarry Smith 1696d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1697014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1698016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 169974ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1700d382aafbSBarry Smith #endif 1701d382aafbSBarry Smith 1702014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1703014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 17040ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1705014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1706014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1707014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1708014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1709d382aafbSBarry Smith 1710014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1711014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1712014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1713014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1714014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1715014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1716b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1717d382aafbSBarry Smith 1718d382aafbSBarry Smith /* 1719d382aafbSBarry Smith For use in debuggers 1720d382aafbSBarry Smith */ 1721014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1722014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1723014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1724014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1725014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1726d382aafbSBarry Smith 1727a663daf8SBarry Smith #include <stddef.h> 1728a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1729d382aafbSBarry Smith #include <stdlib.h> 17306c7e564aSBarry Smith 17314a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1732d382aafbSBarry Smith #include <xmmintrin.h> 1733d382aafbSBarry Smith #endif 1734d382aafbSBarry Smith 1735d382aafbSBarry Smith /*@C 1736580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1737580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1738580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1739580bdb30SBarry Smith 1740580bdb30SBarry Smith Not Collective 1741580bdb30SBarry Smith 1742580bdb30SBarry Smith Input Parameters: 1743580bdb30SBarry Smith + b - pointer to initial memory space 1744580bdb30SBarry Smith . a - pointer to copy space 1745580bdb30SBarry Smith - n - length (in bytes) of space to copy 1746580bdb30SBarry Smith 1747580bdb30SBarry Smith Level: intermediate 1748580bdb30SBarry Smith 1749580bdb30SBarry Smith Note: 1750857a15f1SBarry Smith PetscArraymove() is preferred 1751580bdb30SBarry Smith This routine is analogous to memmove(). 1752580bdb30SBarry Smith 1753580bdb30SBarry Smith Developers Note: This is inlined for performance 1754580bdb30SBarry Smith 1755580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1756580bdb30SBarry Smith PetscArraymove() 1757580bdb30SBarry Smith @*/ 1758580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1759580bdb30SBarry Smith { 1760580bdb30SBarry Smith PetscFunctionBegin; 1761580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1762580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1763580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1764580bdb30SBarry Smith if (a < b) { 1765580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1766580bdb30SBarry Smith else { 1767580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1768580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1769580bdb30SBarry Smith } 1770580bdb30SBarry Smith } else { 1771580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1772580bdb30SBarry Smith else { 1773580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1774580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1775580bdb30SBarry Smith } 1776580bdb30SBarry Smith } 1777580bdb30SBarry Smith #else 1778580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1779580bdb30SBarry Smith #endif 1780580bdb30SBarry Smith PetscFunctionReturn(0); 1781580bdb30SBarry Smith } 1782580bdb30SBarry Smith 1783d382aafbSBarry Smith /*@C 1784d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1785d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1786d382aafbSBarry Smith PetscMemmove() in that case. 1787d382aafbSBarry Smith 1788d382aafbSBarry Smith Not Collective 1789d382aafbSBarry Smith 1790d382aafbSBarry Smith Input Parameters: 1791d382aafbSBarry Smith + b - pointer to initial memory space 1792d382aafbSBarry Smith - n - length (in bytes) of space to copy 1793d382aafbSBarry Smith 1794d382aafbSBarry Smith Output Parameter: 1795d382aafbSBarry Smith . a - pointer to copy space 1796d382aafbSBarry Smith 1797d382aafbSBarry Smith Level: intermediate 1798d382aafbSBarry Smith 1799d382aafbSBarry Smith Compile Option: 1800d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1801d382aafbSBarry Smith for memory copies on double precision values. 1802d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1803d382aafbSBarry Smith for memory copies on double precision values. 1804d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1805d382aafbSBarry Smith for memory copies on double precision values. 1806d382aafbSBarry Smith 1807d382aafbSBarry Smith Note: 1808580bdb30SBarry Smith Prefer PetscArraycpy() 1809d382aafbSBarry Smith This routine is analogous to memcpy(). 18101fd49c25SBarry Smith Not available from Fortran 18111fd49c25SBarry Smith 1812f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1813f5f57ec0SBarry Smith 1814580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1815d382aafbSBarry Smith 1816d382aafbSBarry Smith @*/ 18177087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1818d382aafbSBarry Smith { 1819d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1820c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1821c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1822a7e36092SMatthew G Knepley PetscFunctionBegin; 1823e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1824e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1825a7e36092SMatthew G Knepley #else 1826d382aafbSBarry Smith PetscFunctionBegin; 1827a7e36092SMatthew G Knepley #endif 1828a47a537aSLisandro Dalcin if (a != b && n > 0) { 1829d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1830e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1831d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1832d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1833d382aafbSBarry Smith #endif 1834d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1835c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1836d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1837d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1838c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1839c5df96a5SBarry Smith PetscErrorCode ierr; 1840c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18418b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1842d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1843d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1844d382aafbSBarry Smith #else 1845d382aafbSBarry Smith size_t i; 1846d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1847d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1848d382aafbSBarry Smith #endif 1849d382aafbSBarry Smith } else { 1850d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1851d382aafbSBarry Smith } 1852d382aafbSBarry Smith #else 1853d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1854d382aafbSBarry Smith #endif 1855d382aafbSBarry Smith } 1856d382aafbSBarry Smith PetscFunctionReturn(0); 1857d382aafbSBarry Smith } 1858d382aafbSBarry Smith 1859d382aafbSBarry Smith /*@C 1860d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1861d382aafbSBarry Smith 1862d382aafbSBarry Smith Not Collective 1863d382aafbSBarry Smith 1864d382aafbSBarry Smith Input Parameters: 1865d382aafbSBarry Smith + a - pointer to beginning memory location 1866d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith Level: intermediate 1869d382aafbSBarry Smith 1870d382aafbSBarry Smith Compile Option: 1871d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1872d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1873d382aafbSBarry Smith 18741fd49c25SBarry Smith Not available from Fortran 1875857a15f1SBarry Smith Prefer PetscArrayzero() 18761fd49c25SBarry Smith 1877503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1878503cfb0cSBarry Smith 1879580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1880d382aafbSBarry Smith @*/ 18817087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1882d382aafbSBarry Smith { 1883d382aafbSBarry Smith if (n > 0) { 1884d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 188518703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1886d382aafbSBarry Smith #endif 1887d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1888d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1889d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1890d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1891d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1892d382aafbSBarry Smith } else { 1893d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1894d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1895d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1896d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1897d382aafbSBarry Smith } else { 1898d382aafbSBarry Smith #endif 1899d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1900d382aafbSBarry Smith bzero((char *)a,n); 1901d382aafbSBarry Smith #else 1902d382aafbSBarry Smith memset((char*)a,0,n); 1903d382aafbSBarry Smith #endif 1904d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1905d382aafbSBarry Smith } 1906d382aafbSBarry Smith #endif 1907d382aafbSBarry Smith } 1908d382aafbSBarry Smith return 0; 1909d382aafbSBarry Smith } 1910d382aafbSBarry Smith 1911d382aafbSBarry Smith /*MC 1912580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1913580bdb30SBarry Smith 1914580bdb30SBarry Smith Synopsis: 1915580bdb30SBarry Smith #include <petscsys.h> 1916580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1917580bdb30SBarry Smith 1918580bdb30SBarry Smith Not Collective 1919580bdb30SBarry Smith 1920580bdb30SBarry Smith Input Parameters: 1921580bdb30SBarry Smith + str1 - First array 1922580bdb30SBarry Smith . str2 - Second array 1923580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1924580bdb30SBarry Smith 1925580bdb30SBarry Smith Output Parameters: 1926580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1927580bdb30SBarry Smith 1928580bdb30SBarry Smith Level: intermediate 1929580bdb30SBarry Smith 1930580bdb30SBarry Smith Note: 1931857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1932580bdb30SBarry Smith The arrays must be of the same type 1933580bdb30SBarry Smith 1934580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1935580bdb30SBarry Smith PetscArraymove() 1936580bdb30SBarry Smith M*/ 19379e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1938580bdb30SBarry Smith 19398f8f2f0dSBarry Smith /*MC 1940580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1941580bdb30SBarry Smith do not overlap 1942580bdb30SBarry Smith 1943580bdb30SBarry Smith Synopsis: 1944580bdb30SBarry Smith #include <petscsys.h> 1945580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1946580bdb30SBarry Smith 1947580bdb30SBarry Smith Not Collective 1948580bdb30SBarry Smith 1949580bdb30SBarry Smith Input Parameters: 1950580bdb30SBarry Smith + str1 - First array 1951580bdb30SBarry Smith . str2 - Second array 1952580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1953580bdb30SBarry Smith 1954580bdb30SBarry Smith Level: intermediate 1955580bdb30SBarry Smith 1956580bdb30SBarry Smith Note: 1957857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1958580bdb30SBarry Smith The arrays must be of the same type 1959580bdb30SBarry Smith 1960580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1961580bdb30SBarry Smith M*/ 19629e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1963580bdb30SBarry Smith 19648f8f2f0dSBarry Smith /*MC 1965580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1966580bdb30SBarry Smith 1967580bdb30SBarry Smith Synopsis: 1968580bdb30SBarry Smith #include <petscsys.h> 1969580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1970580bdb30SBarry Smith 1971580bdb30SBarry Smith Not Collective 1972580bdb30SBarry Smith 1973580bdb30SBarry Smith Input Parameters: 1974de25709eSStefano Zampini + str1 - First array (destination) 1975de25709eSStefano Zampini . str2 - Second array (source) 1976580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1977580bdb30SBarry Smith 1978580bdb30SBarry Smith Level: intermediate 1979580bdb30SBarry Smith 1980580bdb30SBarry Smith Note: 1981857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1982580bdb30SBarry Smith The arrays must be of the same type 1983580bdb30SBarry Smith 1984580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1985580bdb30SBarry Smith M*/ 19869e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1987580bdb30SBarry Smith 19888f8f2f0dSBarry Smith /*MC 1989580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1990580bdb30SBarry Smith 1991580bdb30SBarry Smith Synopsis: 1992580bdb30SBarry Smith #include <petscsys.h> 1993580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1994580bdb30SBarry Smith 1995580bdb30SBarry Smith Not Collective 1996580bdb30SBarry Smith 1997580bdb30SBarry Smith Input Parameters: 1998580bdb30SBarry Smith + str1 - array 1999580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 2000580bdb30SBarry Smith 2001580bdb30SBarry Smith Level: intermediate 2002580bdb30SBarry Smith 2003580bdb30SBarry Smith Note: 2004857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 2005580bdb30SBarry Smith 2006580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 2007580bdb30SBarry Smith M*/ 20089e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 2009580bdb30SBarry Smith 2010d382aafbSBarry Smith /*MC 2011d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 2012d382aafbSBarry Smith 2013eca87e8dSBarry Smith Synopsis: 2014aaa7dc30SBarry Smith #include <petscsys.h> 2015eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 2016eca87e8dSBarry Smith 2017d382aafbSBarry Smith Not Collective 2018d382aafbSBarry Smith 2019d382aafbSBarry Smith Input Parameters: 2020d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 2021d382aafbSBarry Smith . n - number of elements to fetch 2022d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 202350d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2024d382aafbSBarry Smith 2025d382aafbSBarry Smith Level: developer 2026d382aafbSBarry Smith 2027d382aafbSBarry Smith Notes: 2028d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2029d382aafbSBarry Smith 203050d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 203150d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 203250d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 203363cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 203463cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 203563cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2036d382aafbSBarry Smith 2037d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2038d382aafbSBarry Smith address). 2039d382aafbSBarry Smith 2040d382aafbSBarry Smith M*/ 2041d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2042d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2043d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2044d382aafbSBarry Smith } while (0) 2045d382aafbSBarry Smith 2046d382aafbSBarry Smith /* 2047d382aafbSBarry Smith Determine if some of the kernel computation routines use 2048d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2049d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2050d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2051e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2052d382aafbSBarry Smith */ 2053d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2054d382aafbSBarry Smith 2055d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2056d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2057d382aafbSBarry Smith #endif 2058d382aafbSBarry Smith 20595a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20605a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2061d382aafbSBarry Smith #endif 2062d382aafbSBarry Smith 2063d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2064d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2065d382aafbSBarry Smith #endif 2066d382aafbSBarry Smith 2067d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2068d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2069d382aafbSBarry Smith #endif 2070d382aafbSBarry Smith 2071d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2072d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2073d382aafbSBarry Smith #endif 2074d382aafbSBarry Smith 2075d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2076d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2077d382aafbSBarry Smith #endif 2078d382aafbSBarry Smith 2079d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2080d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2081d382aafbSBarry Smith #endif 2082d382aafbSBarry Smith 2083d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2084d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2085d382aafbSBarry Smith #endif 2086d382aafbSBarry Smith 2087d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2088d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2089d382aafbSBarry Smith #endif 2090d382aafbSBarry Smith 2091d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2092d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2093d382aafbSBarry Smith #endif 2094d382aafbSBarry Smith 2095d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2096d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2097d382aafbSBarry Smith #endif 2098d382aafbSBarry Smith 2099d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2100d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2101d382aafbSBarry Smith #endif 2102d382aafbSBarry Smith 2103d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2104d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2105d382aafbSBarry Smith #endif 2106d382aafbSBarry Smith 2107d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2108d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2109d382aafbSBarry Smith #endif 2110d382aafbSBarry Smith 2111d382aafbSBarry Smith #endif 2112d382aafbSBarry Smith 2113d382aafbSBarry Smith /* 2114d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2115d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2116d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2117d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2118d382aafbSBarry Smith ugly extern "C" {} wrappers. 2119d382aafbSBarry Smith */ 2120d382aafbSBarry Smith #if defined(__cplusplus) 2121d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2122d382aafbSBarry Smith # define EXTERN_C_END } 2123d382aafbSBarry Smith #else 2124d382aafbSBarry Smith # define EXTERN_C_BEGIN 2125d382aafbSBarry Smith # define EXTERN_C_END 2126d382aafbSBarry Smith #endif 2127d382aafbSBarry Smith 2128d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2129d382aafbSBarry Smith 2130d382aafbSBarry Smith /*MC 2131d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2132d382aafbSBarry Smith communication 2133d382aafbSBarry Smith 2134d382aafbSBarry Smith Level: beginner 2135d382aafbSBarry Smith 2136d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2137d382aafbSBarry Smith 2138d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2139d382aafbSBarry Smith M*/ 2140d382aafbSBarry Smith 2141d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2142014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2143014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2144c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2145c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2146c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2147c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2148d382aafbSBarry Smith #endif 2149d382aafbSBarry Smith 2150d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2151d382aafbSBarry Smith 2152d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2153d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2154d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2155d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2156d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2157d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2158eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 2159d382aafbSBarry Smith 216061b0d812SBarry Smith /*@C 2161c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2162c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2163c73702f5SBarry Smith 2164c73702f5SBarry Smith Not Collective 2165c73702f5SBarry Smith 2166c73702f5SBarry Smith Input Parameter: 2167c73702f5SBarry Smith . a - the PetscInt64 value 2168c73702f5SBarry Smith 2169c73702f5SBarry Smith Output Parameter: 2170c73702f5SBarry Smith . b - the resulting PetscInt value 2171c73702f5SBarry Smith 2172c73702f5SBarry Smith Level: advanced 2173c73702f5SBarry Smith 2174c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2175c73702f5SBarry Smith 2176c73702f5SBarry Smith Not available from Fortran 2177c73702f5SBarry Smith 217861778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2179c73702f5SBarry Smith @*/ 2180c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2181c73702f5SBarry Smith { 2182c73702f5SBarry Smith PetscFunctionBegin; 2183c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2184e9e21dffSJose E. Roman if (a > PETSC_MAX_INT) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); } 2185c73702f5SBarry Smith #endif 2186c73702f5SBarry Smith *b = (PetscInt)(a); 2187c73702f5SBarry Smith PetscFunctionReturn(0); 2188c73702f5SBarry Smith } 2189c73702f5SBarry Smith 2190c73702f5SBarry Smith /*@C 219161b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 219261b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 219361b0d812SBarry Smith 219461b0d812SBarry Smith Not Collective 219561b0d812SBarry Smith 219661b0d812SBarry Smith Input Parameter: 219761b0d812SBarry Smith . a - the PetscInt value 219861b0d812SBarry Smith 219961b0d812SBarry Smith Output Parameter: 220061b0d812SBarry Smith . b - the resulting PetscBLASInt value 220161b0d812SBarry Smith 220261b0d812SBarry Smith Level: advanced 220361b0d812SBarry Smith 22040bc7d38cSBarry Smith Notes: 22051fd49c25SBarry Smith Not available from Fortran 2206f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 22071fd49c25SBarry Smith 2208c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 220961b0d812SBarry Smith @*/ 2210c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2211c5df96a5SBarry Smith { 2212c5df96a5SBarry Smith PetscFunctionBegin; 2213c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2214e9e21dffSJose E. Roman if (a > PETSC_BLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running",a); } 2215c5df96a5SBarry Smith #endif 2216e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); } 2217c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2218c5df96a5SBarry Smith PetscFunctionReturn(0); 2219c5df96a5SBarry Smith } 2220c5df96a5SBarry Smith 222161b0d812SBarry Smith /*@C 2222eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2223eee0c0a6SToby Isaac 2224eee0c0a6SToby Isaac Not Collective 2225eee0c0a6SToby Isaac 2226eee0c0a6SToby Isaac Input Parameter: 2227eee0c0a6SToby Isaac . a - the PetscInt value 2228eee0c0a6SToby Isaac 2229eee0c0a6SToby Isaac Output Parameter: 2230eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2231eee0c0a6SToby Isaac 2232eee0c0a6SToby Isaac Level: advanced 2233eee0c0a6SToby Isaac 2234eee0c0a6SToby Isaac Notes: 2235eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2236eee0c0a6SToby Isaac 2237eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2238eee0c0a6SToby Isaac @*/ 2239eee0c0a6SToby Isaac PETSC_STATIC_INLINE PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscBLASInt *b) 2240eee0c0a6SToby Isaac { 2241eee0c0a6SToby Isaac PetscFunctionBegin; 2242eee0c0a6SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 2243e9e21dffSJose E. Roman if (a > PETSC_CUBLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for cuBLAS, which is restricted to 32 bit integers.",a); } 2244eee0c0a6SToby Isaac #endif 2245e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); } 2246eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2247eee0c0a6SToby Isaac PetscFunctionReturn(0); 2248eee0c0a6SToby Isaac } 2249eee0c0a6SToby Isaac 2250eee0c0a6SToby Isaac /*@C 225161b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 225261b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 225361b0d812SBarry Smith 225461b0d812SBarry Smith Not Collective 225561b0d812SBarry Smith 225661b0d812SBarry Smith Input Parameter: 225761b0d812SBarry Smith . a - the PetscInt value 225861b0d812SBarry Smith 225961b0d812SBarry Smith Output Parameter: 226061b0d812SBarry Smith . b - the resulting PetscMPIInt value 226161b0d812SBarry Smith 226261b0d812SBarry Smith Level: advanced 226361b0d812SBarry Smith 22641fd49c25SBarry Smith Not available from Fortran 22651fd49c25SBarry Smith 2266c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 226761b0d812SBarry Smith @*/ 22684dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22694dc2109aSBarry Smith { 22704dc2109aSBarry Smith PetscFunctionBegin; 22714dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2272e9e21dffSJose E. Roman if (a > PETSC_MPI_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for MPI buffer length. We currently only support 32 bit integers",a); } 22734dc2109aSBarry Smith #endif 2274c73702f5SBarry Smith *b = (PetscMPIInt)(a); 22754dc2109aSBarry Smith PetscFunctionReturn(0); 22764dc2109aSBarry Smith } 22774dc2109aSBarry Smith 2278bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 22792f18eb33SBarry Smith 22802f18eb33SBarry Smith /*@C 22812f18eb33SBarry Smith 22822f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22832f18eb33SBarry Smith 22842f18eb33SBarry Smith Not Collective 22852f18eb33SBarry Smith 2286d8d19677SJose E. Roman Input Parameters: 22872f18eb33SBarry Smith + a - the PetscReal value 22882f18eb33SBarry Smith - b - the second value 22892f18eb33SBarry Smith 2290390e1bf2SBarry Smith Returns: 2291390e1bf2SBarry Smith the result as a PetscInt value 22922f18eb33SBarry Smith 2293bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22942f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22952f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22962f18eb33SBarry Smith 2297e28ce29aSPatrick Sanan Developers Note: 2298e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22992f18eb33SBarry Smith 23002f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23012f18eb33SBarry Smith 23021fd49c25SBarry Smith Not available from Fortran 23031fd49c25SBarry Smith 23042f18eb33SBarry Smith Level: advanced 23052f18eb33SBarry Smith 230661778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23072f18eb33SBarry Smith @*/ 23082f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 23092f18eb33SBarry Smith { 2310bafee8b4SSatish Balay PetscInt64 r; 23112f18eb33SBarry Smith 2312bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 23132f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23142f18eb33SBarry Smith return (PetscInt) r; 23152f18eb33SBarry Smith } 23162f18eb33SBarry Smith 23172f18eb33SBarry Smith /*@C 23182f18eb33SBarry Smith 23192f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23202f18eb33SBarry Smith 23212f18eb33SBarry Smith Not Collective 23222f18eb33SBarry Smith 2323d8d19677SJose E. Roman Input Parameters: 23242f18eb33SBarry Smith + a - the PetscInt value 23252f18eb33SBarry Smith - b - the second value 23262f18eb33SBarry Smith 2327390e1bf2SBarry Smith Returns: 2328390e1bf2SBarry Smith the result as a PetscInt value 23292f18eb33SBarry Smith 2330bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23312f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23322f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23332f18eb33SBarry Smith 23341fd49c25SBarry Smith Not available from Fortran 23351fd49c25SBarry Smith 23362f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23372f18eb33SBarry Smith 23382f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23392f18eb33SBarry Smith 23402f18eb33SBarry Smith Level: advanced 23412f18eb33SBarry Smith 234261778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23432f18eb33SBarry Smith @*/ 23442f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23452f18eb33SBarry Smith { 2346bafee8b4SSatish Balay PetscInt64 r; 23472f18eb33SBarry Smith 2348bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23492f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23502f18eb33SBarry Smith return (PetscInt) r; 23512f18eb33SBarry Smith } 23522f18eb33SBarry Smith 2353f91af8c7SBarry Smith /*@C 2354f91af8c7SBarry Smith 2355f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2356f91af8c7SBarry Smith 2357f91af8c7SBarry Smith Not Collective 2358f91af8c7SBarry Smith 2359d8d19677SJose E. Roman Input Parameters: 2360f91af8c7SBarry Smith + a - the PetscInt value 2361f91af8c7SBarry Smith - b - the second value 2362f91af8c7SBarry Smith 2363390e1bf2SBarry Smith Returns: 2364390e1bf2SBarry Smith the result as a PetscInt value 2365f91af8c7SBarry Smith 2366bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2367f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2368f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2369f91af8c7SBarry Smith 2370f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2371f91af8c7SBarry Smith 2372f5f57ec0SBarry Smith Not available from Fortran 2373f5f57ec0SBarry Smith 2374f91af8c7SBarry Smith Level: advanced 2375f91af8c7SBarry Smith 237661778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2377f91af8c7SBarry Smith @*/ 2378f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2379f91af8c7SBarry Smith { 2380bafee8b4SSatish Balay PetscInt64 r; 2381f91af8c7SBarry Smith 2382bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2383f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2384f91af8c7SBarry Smith return (PetscInt) r; 2385f91af8c7SBarry Smith } 2386f91af8c7SBarry Smith 23872f18eb33SBarry Smith /*@C 23882f18eb33SBarry Smith 23892f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23902f18eb33SBarry Smith 23912f18eb33SBarry Smith Not Collective 23922f18eb33SBarry Smith 2393d8d19677SJose E. Roman Input Parameters: 23942f18eb33SBarry Smith + a - the PetscInt value 23952f18eb33SBarry Smith - b - the second value 23962f18eb33SBarry Smith 2397d8d19677SJose E. Roman Output Parameter: 2398390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 23992f18eb33SBarry Smith 2400bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 24012f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 24022f18eb33SBarry Smith 2403f5f57ec0SBarry Smith Not available from Fortran 2404f5f57ec0SBarry Smith 2405220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 24062f18eb33SBarry Smith 24072f18eb33SBarry Smith Level: advanced 24082f18eb33SBarry Smith 2409220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 24102f18eb33SBarry Smith @*/ 24112f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 24122f18eb33SBarry Smith { 2413bafee8b4SSatish Balay PetscInt64 r; 24142f18eb33SBarry Smith 24152f18eb33SBarry Smith PetscFunctionBegin; 2416bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 24172f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 241861778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 24192f18eb33SBarry Smith #endif 2420f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2421f91af8c7SBarry Smith PetscFunctionReturn(0); 2422f91af8c7SBarry Smith } 2423f91af8c7SBarry Smith 2424f91af8c7SBarry Smith /*@C 2425f91af8c7SBarry Smith 2426fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2427f91af8c7SBarry Smith 2428f91af8c7SBarry Smith Not Collective 2429f91af8c7SBarry Smith 2430d8d19677SJose E. Roman Input Parameters: 2431f91af8c7SBarry Smith + a - the PetscInt value 2432f91af8c7SBarry Smith - b - the second value 2433f91af8c7SBarry Smith 2434d8d19677SJose E. Roman Output Parameter: 2435390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2436f91af8c7SBarry Smith 2437bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2438f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2439f91af8c7SBarry Smith 2440f5f57ec0SBarry Smith Not available from Fortran 2441f5f57ec0SBarry Smith 2442f91af8c7SBarry Smith Level: advanced 2443f91af8c7SBarry Smith 244461778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2445f91af8c7SBarry Smith @*/ 2446f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2447f91af8c7SBarry Smith { 2448bafee8b4SSatish Balay PetscInt64 r; 2449f91af8c7SBarry Smith 2450f91af8c7SBarry Smith PetscFunctionBegin; 2451bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2452f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 245361778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2454f91af8c7SBarry Smith #endif 2455f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 24562f18eb33SBarry Smith PetscFunctionReturn(0); 24572f18eb33SBarry Smith } 2458c5df96a5SBarry Smith 2459d382aafbSBarry Smith /* 24602981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2461d382aafbSBarry Smith */ 2462d382aafbSBarry Smith #if defined(hz) 2463d382aafbSBarry Smith # undef hz 2464d382aafbSBarry Smith #endif 2465d382aafbSBarry Smith 246615a5570dSLisandro Dalcin #include <limits.h> 246715a5570dSLisandro Dalcin 246815a5570dSLisandro Dalcin /* The number of bits in a byte */ 246915a5570dSLisandro Dalcin 247015a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 247115a5570dSLisandro Dalcin 2472d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2473d382aafbSBarry Smith # include <sys/types.h> 2474d382aafbSBarry Smith #endif 2475d382aafbSBarry Smith 2476d382aafbSBarry Smith /*MC 2477d382aafbSBarry Smith 247866d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 247966d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 248066d79e26SBarry Smith 248166d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 248266d79e26SBarry Smith 248366d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 248466d79e26SBarry Smith 248566d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 248666d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 248766d79e26SBarry Smith 248866d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 248966d79e26SBarry Smith 249066d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 249166d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 249266d79e26SBarry Smith version number (x.y.z). 249366d79e26SBarry Smith 249466d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 249566d79e26SBarry Smith 249666d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 249766d79e26SBarry Smith 249866d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 249966d79e26SBarry Smith 250066d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 250166d79e26SBarry Smith 250266d79e26SBarry Smith Level: intermediate 250366d79e26SBarry Smith 250466d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 250566d79e26SBarry Smith 250666d79e26SBarry Smith M*/ 250766d79e26SBarry Smith 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 251427710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 25155f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2516d382aafbSBarry Smith 25176a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 25186a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 25196a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2521ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 252222ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2524f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 252560e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2526d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 25306c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 253117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 253217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25345569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 253617df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 253839f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2540745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 254139f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 25456c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 25466c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2547e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2548ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2549ce605777SToby Isaac 25504d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2551676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2552676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2553676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 25544d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2555676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2556676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2557676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2558676f2a66SJacob Faibussowitsch 2559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2561d382aafbSBarry Smith 256276bdecfbSBarry Smith /*J 2563d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2564d382aafbSBarry Smith 2565d382aafbSBarry Smith Level: beginner 2566d382aafbSBarry Smith 2567e28ce29aSPatrick Sanan Notes: 2568e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 256925ccb61fSToby Isaac with the option --download-sprng or --download-random123 2570d382aafbSBarry Smith 25718f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 257276bdecfbSBarry Smith J*/ 257319fd82e9SBarry Smith typedef const char* PetscRandomType; 2574d382aafbSBarry Smith #define PETSCRAND "rand" 2575d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2576d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2577c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 257825ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2579808ba619SStefano Zampini #define PETSCCURAND "curand" 2580d382aafbSBarry Smith 2581d382aafbSBarry Smith /* Logging support */ 2582014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2583d382aafbSBarry Smith 2584607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2585d382aafbSBarry Smith 2586d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2587140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2588d382aafbSBarry Smith 2589bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 259019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 259219fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2593fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2595d382aafbSBarry Smith 2596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2599808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2600808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2607d382aafbSBarry Smith 2608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 261597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 26168a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 261797540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2618d382aafbSBarry Smith 261930815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 262030815ce0SLisandro Dalcin 26219860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 26229860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2623f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2624f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2632c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2633e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2634c891a504SStefano Zampini #endif 2635d382aafbSBarry Smith 2636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2639d382aafbSBarry Smith 2640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2643014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2644014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 26462a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2647d382aafbSBarry Smith 2648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2653cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2654cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2655d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2656d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2657d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2658d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 26596afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 26606afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26616afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26626afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26636afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2664d382aafbSBarry Smith 26656145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26666145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26676145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26686145cd65SJed Brown 2669014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2670d382aafbSBarry Smith 2671ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2672ce94432eSBarry Smith 267345487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 267445487dadSJed Brown 2675d382aafbSBarry Smith struct _n_PetscSubcomm { 2676d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2677d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2678306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 267945487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 268045487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2681708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 268245487dadSJed Brown PetscSubcommType type; 2683e5acf8a4SHong Zhang char *subcommprefix; 2684d382aafbSBarry Smith }; 2685d382aafbSBarry Smith 2686c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2687306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 268836be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 269365d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2694053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2695f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2696e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2697a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2698a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2699a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2700d382aafbSBarry Smith 27019962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 27029962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 27039962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 27049962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 27059962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 27069962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 27079962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 27089962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 27099962606eSBarry Smith 27105e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 27115f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 27125f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27135f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27145f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 27155e71baefSBarry Smith 2716a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2717a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2718a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2719a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2720a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2721a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2722a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2723a32e93adSJunchao Zhang 272413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 27250f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 272613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2727137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2728137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2729137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 273013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 273113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 27320f453b92SJed Brown 2733471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2734471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2735471ecdacSJed Brown * possible. */ 27366a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2737d382aafbSBarry Smith 27389de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27399de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27409de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27419de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27429de0f6ecSBarry Smith 2743ace2fbaeSBarry Smith #include <stdarg.h> 2744ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2745ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2746ace2fbaeSBarry Smith 2747268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2748fbfcfee5SBarry Smith 27491f817a21SBarry Smith /*@C 27501f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 27511f817a21SBarry Smith 27521f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 27531f817a21SBarry Smith 27541f817a21SBarry Smith Input Parameters: 27551f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 27561f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 27571f817a21SBarry Smith 2758850545d0SSatish Balay Level: intermediate 2759850545d0SSatish Balay 2760f5f57ec0SBarry Smith Not available from Fortran 2761f5f57ec0SBarry Smith 27621f817a21SBarry Smith Options Database: 2763063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27641f817a21SBarry Smith @*/ 2765dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2766dff31646SBarry Smith { 2767dff31646SBarry Smith size_t len; 2768dff31646SBarry Smith char *vstring; 2769dff31646SBarry Smith PetscErrorCode ierr; 2770dff31646SBarry Smith 27711f817a21SBarry Smith PetscFunctionBegin; 27728d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2773dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 277435005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2775580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2776dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27771f817a21SBarry Smith PetscFunctionReturn(0); 2778dff31646SBarry Smith } 2779dff31646SBarry Smith 2780b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2781fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2782fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2783f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2784fe278a28SBarry Smith 2785f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2786f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2787b967cddfSBarry Smith 27889f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27899f4d3c52SBarry Smith 279004102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2791763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2792dff31646SBarry Smith 279368e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27945dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2795d382aafbSBarry Smith 2796b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2797503e1a2cSLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscStrHash(const char *str) 2798df05ca09SBarry Smith { 2799df05ca09SBarry Smith unsigned int c,hash = 5381; 2800df05ca09SBarry Smith 2801503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2802df05ca09SBarry Smith return hash; 2803df05ca09SBarry Smith } 280477a5e07dSBarry Smith 280577a5e07dSBarry Smith /*MC 280677a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 280777a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 280877a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 280977a5e07dSBarry Smith 2810d083f849SBarry Smith Collective 281177a5e07dSBarry Smith 281277a5e07dSBarry Smith Synopsis: 281377a5e07dSBarry Smith #include <petscsys.h> 281477a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 281577a5e07dSBarry Smith 281677a5e07dSBarry Smith Input Parameters: 2817df05ca09SBarry Smith + a - pointer to the input data to be reduced 2818df05ca09SBarry Smith . c - the number of MPI data items in a and b 2819df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2820df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2821df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 282277a5e07dSBarry Smith 282377a5e07dSBarry Smith Output Parameter: 2824df05ca09SBarry Smith . b - the reduced values 282577a5e07dSBarry Smith 2826e28ce29aSPatrick Sanan Notes: 2827e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 282877a5e07dSBarry Smith 2829df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2830df05ca09SBarry Smith 2831df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2832df05ca09SBarry Smith 283377a5e07dSBarry Smith Level: developer 283477a5e07dSBarry Smith 283577a5e07dSBarry Smith .seealso: MPI_Allreduce() 283677a5e07dSBarry Smith M*/ 2837df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do {\ 2838df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2839df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6];\ 2840df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2841df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2842df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2843df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 2844df05ca09SBarry Smith if (-a_b2[0] != a_b2[1]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 2845df05ca09SBarry Smith if (-a_b2[2] != a_b2[3]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 2846df05ca09SBarry Smith if (-a_b2[4] != a_b2[5]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",c);\ 2847df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2848df05ca09SBarry Smith } while (0) 2849b2566f29SBarry Smith #else 2850df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2851b2566f29SBarry Smith #endif 2852b2566f29SBarry Smith 2853b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 28548198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 28558198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 28562f065d89SBarry Smith #endif 28578198064fSBarry Smith 2858cd88fca5SStefano Zampini /* this is a vile hack */ 2859cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 2860961fb248SStefano Zampini #if !defined(PETSC_NECMPI_VERSION_MAJOR) || \ 2861961fb248SStefano Zampini !defined(PETSC_NECMPI_VERSION_MINOR) || \ 2862961fb248SStefano Zampini PETSC_NECMPI_VERSION_MAJOR < 2 || \ 2863961fb248SStefano Zampini (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2864cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0); 2865cd88fca5SStefano Zampini #endif 2866961fb248SStefano Zampini #endif 2867cd88fca5SStefano Zampini 286812801b39SBarry Smith /* 286960fbe2beSVaclav Hapla List of external packages and queries on it 287060fbe2beSVaclav Hapla */ 287160fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 287260fbe2beSVaclav Hapla 2873d382aafbSBarry Smith #endif 2874