1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 11d382aafbSBarry Smith in the conf/variables definition of PETSC_INCLUDE 12d382aafbSBarry Smith */ 13d382aafbSBarry Smith #include "petscconf.h" 14d382aafbSBarry Smith #include "petscfix.h" 15d382aafbSBarry Smith 16d382aafbSBarry Smith /* ========================================================================== */ 17d382aafbSBarry Smith /* 18d382aafbSBarry Smith This facilitates using C version of PETSc from C++ and 19e2e64c6bSBarry Smith C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 20d382aafbSBarry Smith */ 21d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 22d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 23d382aafbSBarry Smith #endif 24*1ec50b02SJed Brown 25*1ec50b02SJed Brown #if defined(__cplusplus) 26*1ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 27*1ec50b02SJed Brown #else 28*1ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 29*1ec50b02SJed Brown #endif 30d382aafbSBarry Smith 31d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 32d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" { 33d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END } 34d382aafbSBarry Smith #else 35d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN 36d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END 37d382aafbSBarry Smith #endif 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 40d382aafbSBarry Smith Current PETSc version number and release date. Also listed in 41d382aafbSBarry Smith Web page 42d382aafbSBarry Smith src/docs/tex/manual/intro.tex, 43d382aafbSBarry Smith src/docs/tex/manual/manual.tex. 44d382aafbSBarry Smith src/docs/website/index.html. 45d382aafbSBarry Smith */ 46d382aafbSBarry Smith #include "petscversion.h" 47301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 48d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1) 49301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \ 50d382aafbSBarry Smith PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 51301d30feSBarry Smith PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE) 52d382aafbSBarry Smith #else 53301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s HG Date: %s", \ 54301d30feSBarry Smith PETSC_VERSION_HG, PETSC_VERSION_DATE_HG) 55d382aafbSBarry Smith #endif 56d382aafbSBarry Smith 57d382aafbSBarry Smith /*MC 58d382aafbSBarry Smith PetscGetVersion - Gets the PETSc version information in a string. 59d382aafbSBarry Smith 60d382aafbSBarry Smith Input Parameter: 61d382aafbSBarry Smith . len - length of the string 62d382aafbSBarry Smith 63d382aafbSBarry Smith Output Parameter: 64d382aafbSBarry Smith . version - version string 65d382aafbSBarry Smith 66d382aafbSBarry Smith Level: developer 67d382aafbSBarry Smith 68d382aafbSBarry Smith Usage: 69d382aafbSBarry Smith char version[256]; 70d382aafbSBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 71d382aafbSBarry Smith 72d382aafbSBarry Smith Fortran Note: 73d382aafbSBarry Smith This routine is not supported in Fortran. 74d382aafbSBarry Smith 75d382aafbSBarry Smith .seealso: PetscGetProgramName() 76d382aafbSBarry Smith 77d382aafbSBarry Smith M*/ 78d382aafbSBarry Smith 79d382aafbSBarry Smith /* ========================================================================== */ 80d382aafbSBarry Smith 81d382aafbSBarry Smith /* 82d382aafbSBarry Smith Currently cannot check formatting for PETSc print statements because we have our 83d382aafbSBarry Smith own format %D and %G 84d382aafbSBarry Smith */ 85d382aafbSBarry Smith #undef PETSC_PRINTF_FORMAT_CHECK 86d382aafbSBarry Smith #define PETSC_PRINTF_FORMAT_CHECK(a,b) 87d382aafbSBarry Smith #undef PETSC_FPRINTF_FORMAT_CHECK 88d382aafbSBarry Smith #define PETSC_FPRINTF_FORMAT_CHECK(a,b) 89d382aafbSBarry Smith 90d382aafbSBarry Smith /* 91e2e64c6bSBarry Smith Fixes for ./configure time choices which impact our interface. Currently only 92d382aafbSBarry Smith calling conventions and extra compiler checking falls under this category. 93d382aafbSBarry Smith */ 94d382aafbSBarry Smith #if !defined(PETSC_STDCALL) 95d382aafbSBarry Smith #define PETSC_STDCALL 96d382aafbSBarry Smith #endif 97d382aafbSBarry Smith #if !defined(PETSC_TEMPLATE) 98d382aafbSBarry Smith #define PETSC_TEMPLATE 99d382aafbSBarry Smith #endif 100d382aafbSBarry Smith #if !defined(PETSC_HAVE_DLL_EXPORT) 101d382aafbSBarry Smith #define PETSC_DLL_EXPORT 102d382aafbSBarry Smith #define PETSC_DLL_IMPORT 103d382aafbSBarry Smith #endif 1048738c821SJed Brown #if !defined(PETSCSYS_DLLEXPORT) 1058738c821SJed Brown #define PETSCSYS_DLLEXPORT 106d382aafbSBarry Smith #endif 107d382aafbSBarry Smith #if !defined(PETSCVEC_DLLEXPORT) 108d382aafbSBarry Smith #define PETSCVEC_DLLEXPORT 109d382aafbSBarry Smith #endif 110d382aafbSBarry Smith #if !defined(PETSCMAT_DLLEXPORT) 111d382aafbSBarry Smith #define PETSCMAT_DLLEXPORT 112d382aafbSBarry Smith #endif 113d382aafbSBarry Smith #if !defined(PETSCDM_DLLEXPORT) 114d382aafbSBarry Smith #define PETSCDM_DLLEXPORT 115d382aafbSBarry Smith #endif 116d382aafbSBarry Smith #if !defined(PETSCKSP_DLLEXPORT) 117d382aafbSBarry Smith #define PETSCKSP_DLLEXPORT 118d382aafbSBarry Smith #endif 119d382aafbSBarry Smith #if !defined(PETSCSNES_DLLEXPORT) 120d382aafbSBarry Smith #define PETSCSNES_DLLEXPORT 121d382aafbSBarry Smith #endif 122d382aafbSBarry Smith #if !defined(PETSCTS_DLLEXPORT) 123d382aafbSBarry Smith #define PETSCTS_DLLEXPORT 124d382aafbSBarry Smith #endif 125d382aafbSBarry Smith #if !defined(PETSCFORTRAN_DLLEXPORT) 126d382aafbSBarry Smith #define PETSCFORTRAN_DLLEXPORT 127d382aafbSBarry Smith #endif 128d382aafbSBarry Smith /* ========================================================================== */ 129d382aafbSBarry Smith 130d382aafbSBarry Smith /* 131d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 132d382aafbSBarry Smith 133d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 134d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 135d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 136d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 137d382aafbSBarry Smith mpicxx.h directly in their code 138d382aafbSBarry Smith */ 139d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 140d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 141d382aafbSBarry Smith #include "mpi.h" 14265013866SBarry Smith 143d382aafbSBarry Smith /* 144d382aafbSBarry Smith Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 145d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 146d382aafbSBarry Smith 147d382aafbSBarry Smith The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense. 148d382aafbSBarry Smith */ 149d382aafbSBarry Smith #include <stdio.h> 150d382aafbSBarry Smith 151d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 152d382aafbSBarry Smith #if !defined(MPIAPI) 153d382aafbSBarry Smith #define MPIAPI 154d382aafbSBarry Smith #endif 155d382aafbSBarry Smith 156b3506946SBarry Smith 157d382aafbSBarry Smith /*MC 158d382aafbSBarry Smith PetscErrorCode - datatype used for return error code from all PETSc functions 159d382aafbSBarry Smith 160d382aafbSBarry Smith Level: beginner 161d382aafbSBarry Smith 162d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 163d382aafbSBarry Smith M*/ 164d382aafbSBarry Smith typedef int PetscErrorCode; 165d382aafbSBarry Smith 166d382aafbSBarry Smith /*MC 167d382aafbSBarry Smith 168503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 169d382aafbSBarry Smith (internal integer in the data structure used for error 170d382aafbSBarry Smith checking). These are all defined by an offset from the lowest 1710700a824SBarry Smith one, PETSC_SMALLEST_CLASSID. 172d382aafbSBarry Smith 173d382aafbSBarry Smith Level: advanced 174d382aafbSBarry Smith 1750700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 176d382aafbSBarry Smith M*/ 1770700a824SBarry Smith typedef int PetscClassId; 178d382aafbSBarry Smith 179d382aafbSBarry Smith /*MC 180c60ec953SBarry Smith PetscLogEvent - id used to identify PETSc or user events which timed portions (blocks of executable) 181c60ec953SBarry Smith code. 182d382aafbSBarry Smith 183d382aafbSBarry Smith Level: intermediate 184d382aafbSBarry Smith 185d382aafbSBarry Smith .seealso: PetscLogEventRegister(), PetscLogEventBegin(), PetscLogEventEnd(), PetscLogStage 186d382aafbSBarry Smith M*/ 187d382aafbSBarry Smith typedef int PetscLogEvent; 188d382aafbSBarry Smith 189d382aafbSBarry Smith /*MC 190c60ec953SBarry Smith PetscLogStage - id used to identify user stages (phases, sections) of runs - for logging 191d382aafbSBarry Smith 192d382aafbSBarry Smith Level: intermediate 193d382aafbSBarry Smith 194d382aafbSBarry Smith .seealso: PetscLogStageRegister(), PetscLogStageBegin(), PetscLogStageEnd(), PetscLogEvent 195d382aafbSBarry Smith M*/ 196d382aafbSBarry Smith typedef int PetscLogStage; 197d382aafbSBarry Smith 198d382aafbSBarry Smith /*MC 199d382aafbSBarry Smith PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 200d382aafbSBarry Smith 201d382aafbSBarry Smith Level: intermediate 202d382aafbSBarry Smith 203d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 2043b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 2053b2a8c54SBarry Smith (except on very rare BLAS/LAPACK implementations that support 64 bit integers). 2063b2a8c54SBarry Smith 2073b2a8c54SBarry Smith PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 2083b2a8c54SBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 2093b2a8c54SBarry Smith 2103b2a8c54SBarry Smith PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2113b2a8c54SBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 212d382aafbSBarry Smith 213d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt 214d382aafbSBarry Smith 215d382aafbSBarry Smith M*/ 216d382aafbSBarry Smith typedef int PetscBLASInt; 217d382aafbSBarry Smith 218d382aafbSBarry Smith /*MC 219d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 220d382aafbSBarry Smith 221d382aafbSBarry Smith Level: intermediate 222d382aafbSBarry Smith 223d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 2243b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 225d382aafbSBarry Smith 2263b2a8c54SBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 227d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 228d382aafbSBarry Smith 2293b2a8c54SBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 230d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 231d382aafbSBarry Smith 232d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 233d382aafbSBarry Smith 234d382aafbSBarry Smith M*/ 235d382aafbSBarry Smith typedef int PetscMPIInt; 236d382aafbSBarry Smith 237d382aafbSBarry Smith /*MC 238d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 239d382aafbSBarry Smith 240d382aafbSBarry Smith Level: intermediate 241d382aafbSBarry Smith 242d382aafbSBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 243d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 244d382aafbSBarry Smith 245d382aafbSBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 246d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 247d382aafbSBarry Smith 248d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 249d382aafbSBarry Smith M*/ 250d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 251d382aafbSBarry Smith 252d382aafbSBarry Smith /*MC 253d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 2543b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 255d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 256d382aafbSBarry Smith 257d382aafbSBarry Smith Level: intermediate 258d382aafbSBarry Smith 259d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 260d382aafbSBarry Smith M*/ 261d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 262d382aafbSBarry Smith typedef long long PetscInt; 263d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT 264d382aafbSBarry Smith #else 265d382aafbSBarry Smith typedef int PetscInt; 266d382aafbSBarry Smith #define MPIU_INT MPI_INT 267d382aafbSBarry Smith #endif 268d382aafbSBarry Smith 269503cfb0cSBarry Smith /* 270503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 271503cfb0cSBarry Smith */ 272d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 273d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT 274d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 275d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG 276d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 277d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT 278d382aafbSBarry Smith #else 279d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 280d382aafbSBarry Smith #endif 281d382aafbSBarry Smith 282d382aafbSBarry Smith 283d382aafbSBarry Smith /* 284d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 285d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 286d382aafbSBarry Smith */ 287d382aafbSBarry Smith 288d382aafbSBarry Smith extern FILE* PETSC_STDOUT; 289d382aafbSBarry Smith 290d382aafbSBarry Smith /* 291d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 292d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 293d382aafbSBarry Smith */ 294d382aafbSBarry Smith extern FILE* PETSC_STDERR; 295d382aafbSBarry Smith 296d382aafbSBarry Smith /* 297d382aafbSBarry Smith PETSC_ZOPEFD is used to send data to the PETSc webpage. It can be used 298d382aafbSBarry Smith in conjunction with PETSC_STDOUT, or by itself. 299d382aafbSBarry Smith */ 300d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD; 301d382aafbSBarry Smith 302d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 303d382aafbSBarry Smith /*MC 304d382aafbSBarry Smith PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of 305d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 306d382aafbSBarry Smith 307d382aafbSBarry Smith Synopsis: 308d382aafbSBarry Smith PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function)) 309d382aafbSBarry Smith 310eca87e8dSBarry Smith Not collective 311eca87e8dSBarry Smith 312d382aafbSBarry Smith Level: developer 313d382aafbSBarry Smith 314d382aafbSBarry Smith Example: 315d382aafbSBarry Smith PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine 316d382aafbSBarry Smith PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r) 317d382aafbSBarry Smith 318d382aafbSBarry Smith .seealso: PetscPolymorphicFunction() 319d382aafbSBarry Smith 320d382aafbSBarry Smith M*/ 321d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;} 322d382aafbSBarry Smith 323d382aafbSBarry Smith /*MC 324d382aafbSBarry Smith PetscPolymorphicScalar - allows defining a C++ polymorphic version of 325d382aafbSBarry Smith a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument 326d382aafbSBarry Smith 327d382aafbSBarry Smith Synopsis: 328d382aafbSBarry Smith PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function)) 329d382aafbSBarry Smith 330eca87e8dSBarry Smith Not collective 331eca87e8dSBarry Smith 332d382aafbSBarry Smith Level: developer 333d382aafbSBarry Smith 334d382aafbSBarry Smith Example: 335d382aafbSBarry Smith PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine 336d382aafbSBarry Smith PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);} 337d382aafbSBarry Smith 338d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine() 339d382aafbSBarry Smith 340d382aafbSBarry Smith M*/ 341d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;} 342d382aafbSBarry Smith 343d382aafbSBarry Smith /*MC 344d382aafbSBarry Smith PetscPolymorphicFunction - allows defining a C++ polymorphic version of 345d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 346d382aafbSBarry Smith and returns the computed value (istead of an error code) 347d382aafbSBarry Smith 348d382aafbSBarry Smith Synopsis: 349d382aafbSBarry Smith PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name) 350d382aafbSBarry Smith 351eca87e8dSBarry Smith Not collective 352eca87e8dSBarry Smith 353d382aafbSBarry Smith Level: developer 354d382aafbSBarry Smith 355d382aafbSBarry Smith Example: 356d382aafbSBarry Smith PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine 357d382aafbSBarry Smith PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;} 358d382aafbSBarry Smith 359d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine() 360d382aafbSBarry Smith 361d382aafbSBarry Smith M*/ 362d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;} 363d382aafbSBarry Smith 364d382aafbSBarry Smith #else 365d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) 366d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) 367d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) 368d382aafbSBarry Smith #endif 369d382aafbSBarry Smith 370d382aafbSBarry Smith /*MC 371d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 372d382aafbSBarry Smith 373d382aafbSBarry Smith Synopsis: 374ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 375d382aafbSBarry Smith 376eca87e8dSBarry Smith Not Collective 377eca87e8dSBarry Smith 378d382aafbSBarry Smith Input Parameters: 379d382aafbSBarry Smith . cond - condition or expression 380d382aafbSBarry Smith 381d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 382d382aafbSBarry Smith branch is unlikely. 383d382aafbSBarry Smith 384d382aafbSBarry Smith Level: advanced 385d382aafbSBarry Smith 386d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 387d382aafbSBarry Smith M*/ 388d382aafbSBarry Smith 389d382aafbSBarry Smith /*MC 390d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 391d382aafbSBarry Smith 392d382aafbSBarry Smith Synopsis: 393ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 394d382aafbSBarry Smith 395eca87e8dSBarry Smith Not Collective 396eca87e8dSBarry Smith 397d382aafbSBarry Smith Input Parameters: 398d382aafbSBarry Smith . cond - condition or expression 399d382aafbSBarry Smith 400d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 401d382aafbSBarry Smith branch is likely. 402d382aafbSBarry Smith 403d382aafbSBarry Smith Level: advanced 404d382aafbSBarry Smith 405d382aafbSBarry Smith .seealso: PetscUnlikely() 406d382aafbSBarry Smith M*/ 407d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 408d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 409d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 410d382aafbSBarry Smith #else 411cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 412cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 413d382aafbSBarry Smith #endif 414d382aafbSBarry Smith 415d382aafbSBarry Smith /* 416d382aafbSBarry Smith Extern indicates a PETSc function defined elsewhere 417d382aafbSBarry Smith */ 418d382aafbSBarry Smith #if !defined(EXTERN) 419d382aafbSBarry Smith #define EXTERN extern 420d382aafbSBarry Smith #endif 421d382aafbSBarry Smith 422d382aafbSBarry Smith /* 423d382aafbSBarry Smith Defines some elementary mathematics functions and constants. 424d382aafbSBarry Smith */ 425d382aafbSBarry Smith #include "petscmath.h" 426d382aafbSBarry Smith 427d382aafbSBarry Smith /* 428d382aafbSBarry Smith Declare extern C stuff after including external header files 429d382aafbSBarry Smith */ 430d382aafbSBarry Smith 431d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN 432d382aafbSBarry Smith 433d382aafbSBarry Smith /* 434d382aafbSBarry Smith Basic PETSc constants 435d382aafbSBarry Smith */ 436d382aafbSBarry Smith 437d382aafbSBarry Smith /*E 438ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 439d382aafbSBarry Smith 440d382aafbSBarry Smith Level: beginner 441d382aafbSBarry Smith 442ace3abfcSBarry Smith Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 44334e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 44434e82e7dSBarry Smith 445d382aafbSBarry Smith E*/ 446ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 447ace3abfcSBarry Smith extern const char *PetscBools[]; 44870b3c8c7SBarry Smith 44970b3c8c7SBarry Smith /*E 45070b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 45170b3c8c7SBarry Smith 45270b3c8c7SBarry Smith Level: beginner 45370b3c8c7SBarry Smith 45470b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 45570b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 45670b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 45770b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 45870b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 45970b3c8c7SBarry Smith 46070b3c8c7SBarry Smith E*/ 46170b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 46270b3c8c7SBarry Smith extern const char *PetscCopyModes[]; 463d382aafbSBarry Smith 464d382aafbSBarry Smith /*MC 465ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 466d382aafbSBarry Smith 467d382aafbSBarry Smith Level: beginner 468d382aafbSBarry Smith 469d382aafbSBarry Smith Note: Zero integer 470d382aafbSBarry Smith 471ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE 472d382aafbSBarry Smith M*/ 473d382aafbSBarry Smith 474d382aafbSBarry Smith /*MC 475ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 476d382aafbSBarry Smith 477d382aafbSBarry Smith Level: beginner 478d382aafbSBarry Smith 479d382aafbSBarry Smith Note: Nonzero integer 480d382aafbSBarry Smith 481ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE 482d382aafbSBarry Smith M*/ 483d382aafbSBarry Smith 484d382aafbSBarry Smith /*MC 485d382aafbSBarry Smith PETSC_YES - Alias for PETSC_TRUE 486d382aafbSBarry Smith 487d382aafbSBarry Smith Level: beginner 488d382aafbSBarry Smith 489d382aafbSBarry Smith Note: Zero integer 490d382aafbSBarry Smith 491ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE, PETSC_FALSE, PETSC_NO 492d382aafbSBarry Smith M*/ 493d382aafbSBarry Smith #define PETSC_YES PETSC_TRUE 494d382aafbSBarry Smith 495d382aafbSBarry Smith /*MC 496d382aafbSBarry Smith PETSC_NO - Alias for PETSC_FALSE 497d382aafbSBarry Smith 498d382aafbSBarry Smith Level: beginner 499d382aafbSBarry Smith 500d382aafbSBarry Smith Note: Nonzero integer 501d382aafbSBarry Smith 502ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE, PETSC_FALSE, PETSC_YES 503d382aafbSBarry Smith M*/ 504d382aafbSBarry Smith #define PETSC_NO PETSC_FALSE 505d382aafbSBarry Smith 506d382aafbSBarry Smith /*MC 507d382aafbSBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer 508d382aafbSBarry Smith 509d382aafbSBarry Smith Level: beginner 510d382aafbSBarry Smith 511d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 512d382aafbSBarry Smith some default 513d382aafbSBarry Smith 514d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 515503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 516d382aafbSBarry Smith 51734e82e7dSBarry Smith Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under 51834e82e7dSBarry Smith different versions of Unix. It is tricky to insure the correct include file is always included. 51934e82e7dSBarry Smith 520d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 521d382aafbSBarry Smith 522d382aafbSBarry Smith M*/ 523d382aafbSBarry Smith #define PETSC_NULL 0 524d382aafbSBarry Smith 525d382aafbSBarry Smith /*MC 526d382aafbSBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 527d382aafbSBarry Smith where you wish PETSc to use the default. 528d382aafbSBarry Smith 529d382aafbSBarry Smith Level: beginner 530d382aafbSBarry Smith 531d382aafbSBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 532d382aafbSBarry Smith 533d382aafbSBarry Smith M*/ 534d382aafbSBarry Smith #define PETSC_DECIDE -1 535d382aafbSBarry Smith 536d382aafbSBarry Smith /*MC 537d382aafbSBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 538d382aafbSBarry Smith where you wish PETSc to use the default. 539d382aafbSBarry Smith 540d382aafbSBarry Smith Level: beginner 541d382aafbSBarry Smith 542d382aafbSBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 543d382aafbSBarry Smith 544d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 545d382aafbSBarry Smith 546d382aafbSBarry Smith M*/ 547d382aafbSBarry Smith #define PETSC_DEFAULT -2 548d382aafbSBarry Smith 549d382aafbSBarry Smith 550d382aafbSBarry Smith /*MC 551d382aafbSBarry Smith PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 552d382aafbSBarry Smith 553d382aafbSBarry Smith Level: beginner 554d382aafbSBarry Smith 555d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 556d382aafbSBarry Smith some default 557d382aafbSBarry Smith 558d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 559d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 560d382aafbSBarry Smith 561d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 562d382aafbSBarry Smith 563d382aafbSBarry Smith M*/ 564d382aafbSBarry Smith #define PETSC_IGNORE PETSC_NULL 565d382aafbSBarry Smith 566d382aafbSBarry Smith /*MC 567d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 568d382aafbSBarry Smith where you wish PETSc to compute the required value. 569d382aafbSBarry Smith 570d382aafbSBarry Smith Level: beginner 571d382aafbSBarry Smith 572d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 573d382aafbSBarry Smith 574d382aafbSBarry Smith M*/ 575d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 576d382aafbSBarry Smith 577d382aafbSBarry Smith /*MC 578d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 579d382aafbSBarry Smith all the processs that PETSc knows about. 580d382aafbSBarry Smith 581d382aafbSBarry Smith Level: beginner 582d382aafbSBarry Smith 583d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 584d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 585d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 586d382aafbSBarry Smith PetscInitialize() 587d382aafbSBarry Smith 588d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 589d382aafbSBarry Smith 590d382aafbSBarry Smith M*/ 591d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD; 592d382aafbSBarry Smith 593d382aafbSBarry Smith /*MC 594503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 595d382aafbSBarry Smith 596d382aafbSBarry Smith Level: beginner 597d382aafbSBarry Smith 598d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 599d382aafbSBarry Smith 600d382aafbSBarry Smith M*/ 601d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 602d382aafbSBarry Smith 603ace3abfcSBarry Smith extern PETSCSYS_DLLEXPORT PetscBool PetscInitializeCalled; 604ace3abfcSBarry Smith extern PETSCSYS_DLLEXPORT PetscBool PetscFinalizeCalled; 605d382aafbSBarry Smith 6068738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 6078738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 6088738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommDestroy(MPI_Comm*); 609d382aafbSBarry Smith 610d382aafbSBarry Smith /*MC 611d382aafbSBarry Smith PetscMalloc - Allocates memory 612d382aafbSBarry Smith 613eca87e8dSBarry Smith Synopsis: 614eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 615eca87e8dSBarry Smith 616eca87e8dSBarry Smith Not Collective 617eca87e8dSBarry Smith 618d382aafbSBarry Smith Input Parameter: 619d382aafbSBarry Smith . m - number of bytes to allocate 620d382aafbSBarry Smith 621d382aafbSBarry Smith Output Parameter: 622d382aafbSBarry Smith . result - memory allocated 623d382aafbSBarry Smith 624d382aafbSBarry Smith Level: beginner 625d382aafbSBarry Smith 626d382aafbSBarry Smith Notes: Memory is always allocated at least double aligned 627d382aafbSBarry Smith 628d382aafbSBarry Smith If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 629d382aafbSBarry Smith properly handle not freeing the null pointer. 630d382aafbSBarry Smith 631d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 632d382aafbSBarry Smith 633d382aafbSBarry Smith Concepts: memory allocation 634d382aafbSBarry Smith 635d382aafbSBarry Smith M*/ 6362714b66aSJed Brown #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 637d382aafbSBarry Smith 638d382aafbSBarry Smith /*MC 639503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 640d382aafbSBarry Smith 641d382aafbSBarry Smith Synopsis: 642d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 643d382aafbSBarry Smith 644eca87e8dSBarry Smith Not Collective 645eca87e8dSBarry Smith 646eca87e8dSBarry Smith Input Parameters: 647eca87e8dSBarry Smith . addr - address to align (any pointer type) 648eca87e8dSBarry Smith 649d382aafbSBarry Smith Level: developer 650d382aafbSBarry Smith 651d382aafbSBarry Smith .seealso: PetscMallocAlign() 652d382aafbSBarry Smith 653d382aafbSBarry Smith Concepts: memory allocation 654d382aafbSBarry Smith M*/ 655d382aafbSBarry Smith #if defined PETSC_UINTPTR_T 656d382aafbSBarry Smith # define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 657d382aafbSBarry Smith #else 658d382aafbSBarry Smith # define PetscAddrAlign(a) (void*)(a) 659d382aafbSBarry Smith #endif 660d382aafbSBarry Smith 661d382aafbSBarry Smith /*MC 662503cfb0cSBarry Smith PetscMalloc2 - Allocates 2 chunks of memory both aligned to PETSC_MEMALIGN 663d382aafbSBarry Smith 664eca87e8dSBarry Smith Synopsis: 665eca87e8dSBarry Smith PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 666eca87e8dSBarry Smith 667eca87e8dSBarry Smith Not Collective 668eca87e8dSBarry Smith 669d382aafbSBarry Smith Input Parameter: 670d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 671d382aafbSBarry Smith . t1 - type of first memory elements 672d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 673d382aafbSBarry Smith - t2 - type of second memory elements 674d382aafbSBarry Smith 675d382aafbSBarry Smith Output Parameter: 676d382aafbSBarry Smith + r1 - memory allocated in first chunk 677d382aafbSBarry Smith - r2 - memory allocated in second chunk 678d382aafbSBarry Smith 679d382aafbSBarry Smith Level: developer 680d382aafbSBarry Smith 681d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 682d382aafbSBarry Smith 683d382aafbSBarry Smith Concepts: memory allocation 684d382aafbSBarry Smith 685d382aafbSBarry Smith M*/ 686d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 687d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 688d382aafbSBarry Smith #else 6893b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \ 690d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 691d382aafbSBarry Smith #endif 692d382aafbSBarry Smith 693d382aafbSBarry Smith /*MC 694503cfb0cSBarry Smith PetscMalloc3 - Allocates 3 chunks of memory all aligned to PETSC_MEMALIGN 695d382aafbSBarry Smith 696eca87e8dSBarry Smith Synopsis: 697eca87e8dSBarry Smith PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 698eca87e8dSBarry Smith 699eca87e8dSBarry Smith Not Collective 700eca87e8dSBarry Smith 701d382aafbSBarry Smith Input Parameter: 702d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 703d382aafbSBarry Smith . t1 - type of first memory elements 704d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 705d382aafbSBarry Smith . t2 - type of second memory elements 706d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 707d382aafbSBarry Smith - t3 - type of third memory elements 708d382aafbSBarry Smith 709d382aafbSBarry Smith Output Parameter: 710d382aafbSBarry Smith + r1 - memory allocated in first chunk 711d382aafbSBarry Smith . r2 - memory allocated in second chunk 712d382aafbSBarry Smith - r3 - memory allocated in third chunk 713d382aafbSBarry Smith 714d382aafbSBarry Smith Level: developer 715d382aafbSBarry Smith 716d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 717d382aafbSBarry Smith 718d382aafbSBarry Smith Concepts: memory allocation 719d382aafbSBarry Smith 720d382aafbSBarry Smith M*/ 721d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 722d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 723d382aafbSBarry Smith #else 7243b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 725d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 726d382aafbSBarry Smith #endif 727d382aafbSBarry Smith 728d382aafbSBarry Smith /*MC 729503cfb0cSBarry Smith PetscMalloc4 - Allocates 4 chunks of memory all aligned to PETSC_MEMALIGN 730d382aafbSBarry Smith 731eca87e8dSBarry Smith Synopsis: 732eca87e8dSBarry Smith PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 733eca87e8dSBarry Smith 734eca87e8dSBarry Smith Not Collective 735eca87e8dSBarry Smith 736d382aafbSBarry Smith Input Parameter: 737d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 738d382aafbSBarry Smith . t1 - type of first memory elements 739d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 740d382aafbSBarry Smith . t2 - type of second memory elements 741d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 742d382aafbSBarry Smith . t3 - type of third memory elements 743d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 744d382aafbSBarry Smith - t4 - type of fourth memory elements 745d382aafbSBarry Smith 746d382aafbSBarry Smith Output Parameter: 747d382aafbSBarry Smith + r1 - memory allocated in first chunk 748d382aafbSBarry Smith . r2 - memory allocated in second chunk 749d382aafbSBarry Smith . r3 - memory allocated in third chunk 750d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 751d382aafbSBarry Smith 752d382aafbSBarry Smith Level: developer 753d382aafbSBarry Smith 754d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 755d382aafbSBarry Smith 756d382aafbSBarry Smith Concepts: memory allocation 757d382aafbSBarry Smith 758d382aafbSBarry Smith M*/ 759d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 760d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 761d382aafbSBarry Smith #else 762d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 7633b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 764d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 765d382aafbSBarry Smith #endif 766d382aafbSBarry Smith 767d382aafbSBarry Smith /*MC 768503cfb0cSBarry Smith PetscMalloc5 - Allocates 5 chunks of memory all aligned to PETSC_MEMALIGN 769d382aafbSBarry Smith 770eca87e8dSBarry Smith Synopsis: 771eca87e8dSBarry Smith PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 772eca87e8dSBarry Smith 773eca87e8dSBarry Smith Not Collective 774eca87e8dSBarry Smith 775d382aafbSBarry Smith Input Parameter: 776d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 777d382aafbSBarry Smith . t1 - type of first memory elements 778d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 779d382aafbSBarry Smith . t2 - type of second memory elements 780d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 781d382aafbSBarry Smith . t3 - type of third memory elements 782d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 783d382aafbSBarry Smith . t4 - type of fourth memory elements 784d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 785d382aafbSBarry Smith - t5 - type of fifth memory elements 786d382aafbSBarry Smith 787d382aafbSBarry Smith Output Parameter: 788d382aafbSBarry Smith + r1 - memory allocated in first chunk 789d382aafbSBarry Smith . r2 - memory allocated in second chunk 790d382aafbSBarry Smith . r3 - memory allocated in third chunk 791d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 792d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 793d382aafbSBarry Smith 794d382aafbSBarry Smith Level: developer 795d382aafbSBarry Smith 796d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 797d382aafbSBarry Smith 798d382aafbSBarry Smith Concepts: memory allocation 799d382aafbSBarry Smith 800d382aafbSBarry Smith M*/ 801d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 802d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 803d382aafbSBarry Smith #else 804d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 8053b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 806d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 807d382aafbSBarry Smith #endif 808d382aafbSBarry Smith 809d382aafbSBarry Smith 810d382aafbSBarry Smith /*MC 811503cfb0cSBarry Smith PetscMalloc6 - Allocates 6 chunks of memory all aligned to PETSC_MEMALIGN 812d382aafbSBarry Smith 813eca87e8dSBarry Smith Synopsis: 814eca87e8dSBarry Smith PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 815eca87e8dSBarry Smith 816eca87e8dSBarry Smith Not Collective 817eca87e8dSBarry Smith 818d382aafbSBarry Smith Input Parameter: 819d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 820d382aafbSBarry Smith . t1 - type of first memory elements 821d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 822d382aafbSBarry Smith . t2 - type of second memory elements 823d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 824d382aafbSBarry Smith . t3 - type of third memory elements 825d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 826d382aafbSBarry Smith . t4 - type of fourth memory elements 827d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 828d382aafbSBarry Smith . t5 - type of fifth memory elements 829d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 830d382aafbSBarry Smith - t6 - type of sixth memory elements 831d382aafbSBarry Smith 832d382aafbSBarry Smith Output Parameter: 833d382aafbSBarry Smith + r1 - memory allocated in first chunk 834d382aafbSBarry Smith . r2 - memory allocated in second chunk 835d382aafbSBarry Smith . r3 - memory allocated in third chunk 836d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 837d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 838d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 839d382aafbSBarry Smith 840d382aafbSBarry Smith Level: developer 841d382aafbSBarry Smith 842d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 843d382aafbSBarry Smith 844d382aafbSBarry Smith Concepts: memory allocation 845d382aafbSBarry Smith 846d382aafbSBarry Smith M*/ 847d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 848d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 849d382aafbSBarry Smith #else 850d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 8513b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 852d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 853d382aafbSBarry Smith #endif 854d382aafbSBarry Smith 855d382aafbSBarry Smith /*MC 856503cfb0cSBarry Smith PetscMalloc7 - Allocates 7 chunks of memory all aligned to PETSC_MEMALIGN 857d382aafbSBarry Smith 858eca87e8dSBarry Smith Synopsis: 859eca87e8dSBarry Smith PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 860eca87e8dSBarry Smith 861eca87e8dSBarry Smith Not Collective 862eca87e8dSBarry Smith 863d382aafbSBarry Smith Input Parameter: 864d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 865d382aafbSBarry Smith . t1 - type of first memory elements 866d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 867d382aafbSBarry Smith . t2 - type of second memory elements 868d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 869d382aafbSBarry Smith . t3 - type of third memory elements 870d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 871d382aafbSBarry Smith . t4 - type of fourth memory elements 872d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 873d382aafbSBarry Smith . t5 - type of fifth memory elements 874d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 875d382aafbSBarry Smith . t6 - type of sixth memory elements 876d382aafbSBarry Smith . m7 - number of elements to allocate in 7th chunk (may be zero) 877d382aafbSBarry Smith - t7 - type of sixth memory elements 878d382aafbSBarry Smith 879d382aafbSBarry Smith Output Parameter: 880d382aafbSBarry Smith + r1 - memory allocated in first chunk 881d382aafbSBarry Smith . r2 - memory allocated in second chunk 882d382aafbSBarry Smith . r3 - memory allocated in third chunk 883d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 884d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 885d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 886eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 887d382aafbSBarry Smith 888d382aafbSBarry Smith Level: developer 889d382aafbSBarry Smith 890d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 891d382aafbSBarry Smith 892d382aafbSBarry Smith Concepts: memory allocation 893d382aafbSBarry Smith 894d382aafbSBarry Smith M*/ 895d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 896d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 897d382aafbSBarry Smith #else 898d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 8993b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 900d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 901d382aafbSBarry Smith #endif 902d382aafbSBarry Smith 903d382aafbSBarry Smith /*MC 904503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 905d382aafbSBarry Smith 906eca87e8dSBarry Smith Synopsis: 907eca87e8dSBarry Smith PetscErrorCode PetscNew(struct type,((type *))result) 908eca87e8dSBarry Smith 909eca87e8dSBarry Smith Not Collective 910eca87e8dSBarry Smith 911d382aafbSBarry Smith Input Parameter: 912d382aafbSBarry Smith . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 913d382aafbSBarry Smith 914d382aafbSBarry Smith Output Parameter: 915d382aafbSBarry Smith . result - memory allocated 916d382aafbSBarry Smith 917d382aafbSBarry Smith Level: beginner 918d382aafbSBarry Smith 919ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog() 920d382aafbSBarry Smith 921d382aafbSBarry Smith Concepts: memory allocation 922d382aafbSBarry Smith 923d382aafbSBarry Smith M*/ 924d382aafbSBarry Smith #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 925ad0619ddSBarry Smith 926ad0619ddSBarry Smith /*MC 927ad0619ddSBarry Smith PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 928ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 929ad0619ddSBarry Smith 930ad0619ddSBarry Smith Synopsis: 931ad0619ddSBarry Smith PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result) 932ad0619ddSBarry Smith 933ad0619ddSBarry Smith Not Collective 934ad0619ddSBarry Smith 935ad0619ddSBarry Smith Input Parameter: 936ad0619ddSBarry Smith + obj - object memory is logged to 937ad0619ddSBarry Smith - type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 938ad0619ddSBarry Smith 939ad0619ddSBarry Smith Output Parameter: 940ad0619ddSBarry Smith . result - memory allocated 941ad0619ddSBarry Smith 942ad0619ddSBarry Smith Level: developer 943ad0619ddSBarry Smith 944ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory() 945ad0619ddSBarry Smith 946ad0619ddSBarry Smith Concepts: memory allocation 947ad0619ddSBarry Smith 948ad0619ddSBarry Smith M*/ 949d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 950d382aafbSBarry Smith 951d382aafbSBarry Smith /*MC 952d382aafbSBarry Smith PetscFree - Frees memory 953d382aafbSBarry Smith 954eca87e8dSBarry Smith Synopsis: 955eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 956eca87e8dSBarry Smith 957eca87e8dSBarry Smith Not Collective 958eca87e8dSBarry Smith 959d382aafbSBarry Smith Input Parameter: 960d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 961d382aafbSBarry Smith 962d382aafbSBarry Smith Level: beginner 963d382aafbSBarry Smith 964d382aafbSBarry Smith Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 965d382aafbSBarry Smith 966d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 967d382aafbSBarry Smith 968d382aafbSBarry Smith Concepts: memory allocation 969d382aafbSBarry Smith 970d382aafbSBarry Smith M*/ 97181dabb53SJed Brown #define PetscFree(a) ((a) ? ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || (((a) = 0),0)) : 0) 972d382aafbSBarry Smith 973d382aafbSBarry Smith /*MC 974d382aafbSBarry Smith PetscFreeVoid - Frees memory 975d382aafbSBarry Smith 976d382aafbSBarry Smith Synopsis: 977d382aafbSBarry Smith void PetscFreeVoid(void *memory) 978d382aafbSBarry Smith 979eca87e8dSBarry Smith Not Collective 980eca87e8dSBarry Smith 981eca87e8dSBarry Smith Input Parameter: 982eca87e8dSBarry Smith . memory - memory to free 983eca87e8dSBarry Smith 984d382aafbSBarry Smith Level: beginner 985d382aafbSBarry Smith 986d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 987d382aafbSBarry Smith 988d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 989d382aafbSBarry Smith 990d382aafbSBarry Smith Concepts: memory allocation 991d382aafbSBarry Smith 992d382aafbSBarry Smith M*/ 9932714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0) 994d382aafbSBarry Smith 995d382aafbSBarry Smith 996d382aafbSBarry Smith /*MC 997d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 998d382aafbSBarry Smith 999eca87e8dSBarry Smith Synopsis: 1000eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1001eca87e8dSBarry Smith 1002eca87e8dSBarry Smith Not Collective 1003eca87e8dSBarry Smith 1004d382aafbSBarry Smith Input Parameter: 1005d382aafbSBarry Smith + memory1 - memory to free 1006d382aafbSBarry Smith - memory2 - 2nd memory to free 1007d382aafbSBarry Smith 1008d382aafbSBarry Smith Level: developer 1009d382aafbSBarry Smith 1010d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 1011d382aafbSBarry Smith 1012d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1013d382aafbSBarry Smith 1014d382aafbSBarry Smith Concepts: memory allocation 1015d382aafbSBarry Smith 1016d382aafbSBarry Smith M*/ 1017d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1018d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 1019d382aafbSBarry Smith #else 102081dabb53SJed Brown #define PetscFree2(m1,m2) ((m2)=0, PetscFree(m1)) 1021d382aafbSBarry Smith #endif 1022d382aafbSBarry Smith 1023d382aafbSBarry Smith /*MC 1024d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1025d382aafbSBarry Smith 1026eca87e8dSBarry Smith Synopsis: 1027eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1028eca87e8dSBarry Smith 1029eca87e8dSBarry Smith Not Collective 1030eca87e8dSBarry Smith 1031d382aafbSBarry Smith Input Parameter: 1032d382aafbSBarry Smith + memory1 - memory to free 1033d382aafbSBarry Smith . memory2 - 2nd memory to free 1034d382aafbSBarry Smith - memory3 - 3rd memory to free 1035d382aafbSBarry Smith 1036d382aafbSBarry Smith Level: developer 1037d382aafbSBarry Smith 1038d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 1039d382aafbSBarry Smith 1040d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1041d382aafbSBarry Smith 1042d382aafbSBarry Smith Concepts: memory allocation 1043d382aafbSBarry Smith 1044d382aafbSBarry Smith M*/ 1045d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1046d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1047d382aafbSBarry Smith #else 104881dabb53SJed Brown #define PetscFree3(m1,m2,m3) ((m3)=0,(m2)=0,PetscFree(m1)) 1049d382aafbSBarry Smith #endif 1050d382aafbSBarry Smith 1051d382aafbSBarry Smith /*MC 1052d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1053d382aafbSBarry Smith 1054eca87e8dSBarry Smith Synopsis: 1055eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1056eca87e8dSBarry Smith 1057eca87e8dSBarry Smith Not Collective 1058eca87e8dSBarry Smith 1059d382aafbSBarry Smith Input Parameter: 1060d382aafbSBarry Smith + m1 - memory to free 1061d382aafbSBarry Smith . m2 - 2nd memory to free 1062d382aafbSBarry Smith . m3 - 3rd memory to free 1063d382aafbSBarry Smith - m4 - 4th memory to free 1064d382aafbSBarry Smith 1065d382aafbSBarry Smith Level: developer 1066d382aafbSBarry Smith 1067d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 1068d382aafbSBarry Smith 1069d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1070d382aafbSBarry Smith 1071d382aafbSBarry Smith Concepts: memory allocation 1072d382aafbSBarry Smith 1073d382aafbSBarry Smith M*/ 1074d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1075d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1076d382aafbSBarry Smith #else 107781dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4) ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1078d382aafbSBarry Smith #endif 1079d382aafbSBarry Smith 1080d382aafbSBarry Smith /*MC 1081d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1082d382aafbSBarry Smith 1083eca87e8dSBarry Smith Synopsis: 1084eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1085eca87e8dSBarry Smith 1086eca87e8dSBarry Smith Not Collective 1087eca87e8dSBarry Smith 1088d382aafbSBarry Smith Input Parameter: 1089d382aafbSBarry Smith + m1 - memory to free 1090d382aafbSBarry Smith . m2 - 2nd memory to free 1091d382aafbSBarry Smith . m3 - 3rd memory to free 1092d382aafbSBarry Smith . m4 - 4th memory to free 1093d382aafbSBarry Smith - m5 - 5th memory to free 1094d382aafbSBarry Smith 1095d382aafbSBarry Smith Level: developer 1096d382aafbSBarry Smith 1097d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 1098d382aafbSBarry Smith 1099d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1100d382aafbSBarry Smith 1101d382aafbSBarry Smith Concepts: memory allocation 1102d382aafbSBarry Smith 1103d382aafbSBarry Smith M*/ 1104d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1105d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1106d382aafbSBarry Smith #else 110781dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1108d382aafbSBarry Smith #endif 1109d382aafbSBarry Smith 1110d382aafbSBarry Smith 1111d382aafbSBarry Smith /*MC 1112d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1113d382aafbSBarry Smith 1114eca87e8dSBarry Smith Synopsis: 1115eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1116eca87e8dSBarry Smith 1117eca87e8dSBarry Smith Not Collective 1118eca87e8dSBarry Smith 1119d382aafbSBarry Smith Input Parameter: 1120d382aafbSBarry Smith + m1 - memory to free 1121d382aafbSBarry Smith . m2 - 2nd memory to free 1122d382aafbSBarry Smith . m3 - 3rd memory to free 1123d382aafbSBarry Smith . m4 - 4th memory to free 1124d382aafbSBarry Smith . m5 - 5th memory to free 1125d382aafbSBarry Smith - m6 - 6th memory to free 1126d382aafbSBarry Smith 1127d382aafbSBarry Smith 1128d382aafbSBarry Smith Level: developer 1129d382aafbSBarry Smith 1130d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1131d382aafbSBarry Smith 1132d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1133d382aafbSBarry Smith 1134d382aafbSBarry Smith Concepts: memory allocation 1135d382aafbSBarry Smith 1136d382aafbSBarry Smith M*/ 1137d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1138d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1139d382aafbSBarry Smith #else 114081dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1141d382aafbSBarry Smith #endif 1142d382aafbSBarry Smith 1143d382aafbSBarry Smith /*MC 1144d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1145d382aafbSBarry Smith 1146eca87e8dSBarry Smith Synopsis: 1147eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1148eca87e8dSBarry Smith 1149eca87e8dSBarry Smith Not Collective 1150eca87e8dSBarry Smith 1151d382aafbSBarry Smith Input Parameter: 1152d382aafbSBarry Smith + m1 - memory to free 1153d382aafbSBarry Smith . m2 - 2nd memory to free 1154d382aafbSBarry Smith . m3 - 3rd memory to free 1155d382aafbSBarry Smith . m4 - 4th memory to free 1156d382aafbSBarry Smith . m5 - 5th memory to free 1157d382aafbSBarry Smith . m6 - 6th memory to free 1158d382aafbSBarry Smith - m7 - 7th memory to free 1159d382aafbSBarry Smith 1160d382aafbSBarry Smith 1161d382aafbSBarry Smith Level: developer 1162d382aafbSBarry Smith 1163d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1164d382aafbSBarry Smith 1165d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1166d382aafbSBarry Smith PetscMalloc7() 1167d382aafbSBarry Smith 1168d382aafbSBarry Smith Concepts: memory allocation 1169d382aafbSBarry Smith 1170d382aafbSBarry Smith M*/ 1171d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1172d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1173d382aafbSBarry Smith #else 117481dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1175d382aafbSBarry Smith #endif 1176d382aafbSBarry Smith 11778738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 11788738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 11798738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 11808738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocClear(void); 1181d382aafbSBarry Smith 1182d382aafbSBarry Smith /* 1183d382aafbSBarry Smith Routines for tracing memory corruption/bleeding with default PETSc 1184d382aafbSBarry Smith memory allocation 1185d382aafbSBarry Smith */ 11868738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDump(FILE *); 11878738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDumpLog(FILE *); 11888738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocGetCurrentUsage(PetscLogDouble *); 11898738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocGetMaximumUsage(PetscLogDouble *); 1190ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDebug(PetscBool); 11918738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocValidate(int,const char[],const char[],const char[]); 11928738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocSetDumpLog(void); 1193d382aafbSBarry Smith 1194d382aafbSBarry Smith 1195d382aafbSBarry Smith /* 1196d382aafbSBarry Smith Variable type where we stash PETSc object pointers in Fortran. 1197d382aafbSBarry Smith On most machines size(pointer) == sizeof(long) - except windows 1198d382aafbSBarry Smith where its sizeof(long long) 1199d382aafbSBarry Smith */ 1200d382aafbSBarry Smith 1201d382aafbSBarry Smith #if (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG) 1202d382aafbSBarry Smith #define PetscFortranAddr long 1203d382aafbSBarry Smith #elif (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG_LONG) 1204d382aafbSBarry Smith #define PetscFortranAddr long long 1205d382aafbSBarry Smith #else 1206d382aafbSBarry Smith #error "Unknown size for PetscFortranAddr! Send us a bugreport at petsc-maint@mcs.anl.gov" 1207d382aafbSBarry Smith #endif 1208d382aafbSBarry Smith 1209d382aafbSBarry Smith /*E 1210d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1211d382aafbSBarry Smith 1212d382aafbSBarry Smith Level: beginner 1213d382aafbSBarry Smith 1214d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1215d382aafbSBarry Smith 1216d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1217d382aafbSBarry Smith PetscDataTypeGetSize() 1218d382aafbSBarry Smith 1219d382aafbSBarry Smith E*/ 1220d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 1221ace3abfcSBarry Smith PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC_LONG_DOUBLE = 10, PETSC_QD_DD = 11} PetscDataType; 1222d382aafbSBarry Smith extern const char *PetscDataTypes[]; 1223d382aafbSBarry Smith 1224d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1225d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1226d382aafbSBarry Smith #else 1227d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1228d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 1229d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1230d382aafbSBarry Smith #define PETSC_SCALAR PETSC_LONG_DOUBLE 1231d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1232d382aafbSBarry Smith #define PETSC_SCALAR PETSC_INT 1233d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1234d382aafbSBarry Smith #define PETSC_SCALAR PETSC_QD_DD 1235d382aafbSBarry Smith #else 1236d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1237d382aafbSBarry Smith #endif 1238d382aafbSBarry Smith #endif 1239d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1240d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 1241d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1242d382aafbSBarry Smith #define PETSC_REAL PETSC_LONG_DOUBLE 1243d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1244d382aafbSBarry Smith #define PETSC_REAL PETSC_INT 1245d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1246d382aafbSBarry Smith #define PETSC_REAL PETSC_QD_DD 1247d382aafbSBarry Smith #else 1248d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1249d382aafbSBarry Smith #endif 1250d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1251d382aafbSBarry Smith 12528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 12538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 12548738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDataTypeGetSize(PetscDataType,size_t*); 1255d382aafbSBarry Smith 1256d382aafbSBarry Smith /* 1257d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1258d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1259d382aafbSBarry Smith functionality and/or error checking. 1260d382aafbSBarry Smith */ 12618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 12628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemmove(void*,void *,size_t); 1263ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemcmp(const void*,const void*,size_t,PetscBool *); 12648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrlen(const char[],size_t*); 12658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrToArray(const char[],int*,char ***); 12668738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrToArrayDestroy(int,char **); 1267ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcmp(const char[],const char[],PetscBool *); 1268ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrgrt(const char[],const char[],PetscBool *); 1269ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcasecmp(const char[],const char[],PetscBool *); 1270ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncmp(const char[],const char[],size_t,PetscBool *); 12718738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcpy(char[],const char[]); 12728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcat(char[],const char[]); 12738738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncat(char[],const char[],size_t); 12748738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncpy(char[],const char[],size_t); 12758738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrchr(const char[],char,char *[]); 12768738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrtolower(char[]); 12778738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrrchr(const char[],char,char *[]); 12788738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrstr(const char[],const char[],char *[]); 12798738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrrstr(const char[],const char[],char *[]); 12808738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrallocpy(const char[],char *[]); 12818738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1282d382aafbSBarry Smith 1283d382aafbSBarry Smith /*S 1284d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1285d382aafbSBarry Smith 1286d382aafbSBarry Smith Level: intermediate 1287d382aafbSBarry Smith 1288d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1289d382aafbSBarry Smith S*/ 1290d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1291d382aafbSBarry Smith 12928738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenCreate(const char[],const char,PetscToken*); 12938738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenFind(PetscToken,char *[]); 12948738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenDestroy(PetscToken); 1295d382aafbSBarry Smith 1296d382aafbSBarry Smith /* 1297d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1298d382aafbSBarry Smith */ 12998738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT MPI_Op PetscMaxSum_Op; 1300d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX) 13018738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT MPI_Op MPIU_SUM; 1302d382aafbSBarry Smith #else 1303d382aafbSBarry Smith #define MPIU_SUM MPI_SUM 1304d382aafbSBarry Smith #endif 13058738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1306d382aafbSBarry Smith 1307d382aafbSBarry Smith /*S 1308d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1309d382aafbSBarry Smith 1310d382aafbSBarry Smith Level: beginner 1311d382aafbSBarry Smith 1312d382aafbSBarry Smith Note: This is the base class from which all objects appear. 1313d382aafbSBarry Smith 13141890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1315d382aafbSBarry Smith S*/ 1316d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1317d382aafbSBarry Smith 1318d382aafbSBarry Smith /*S 1319d382aafbSBarry Smith PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1320d382aafbSBarry Smith by string name 1321d382aafbSBarry Smith 1322d382aafbSBarry Smith Level: advanced 1323d382aafbSBarry Smith 1324d382aafbSBarry Smith .seealso: PetscFListAdd(), PetscFListDestroy() 1325d382aafbSBarry Smith S*/ 1326d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList; 1327d382aafbSBarry Smith 1328d382aafbSBarry Smith /*E 1329d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1330d382aafbSBarry Smith 1331d382aafbSBarry Smith Level: beginner 1332d382aafbSBarry Smith 1333d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1334d382aafbSBarry Smith 1335d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1336d382aafbSBarry Smith 1337d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1338d382aafbSBarry Smith 1339d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1340d382aafbSBarry Smith 1341d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1342d382aafbSBarry Smith 1343d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1344d382aafbSBarry Smith E*/ 1345d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1346d382aafbSBarry Smith 1347d382aafbSBarry Smith #include "petscviewer.h" 1348d382aafbSBarry Smith #include "petscoptions.h" 1349d382aafbSBarry Smith 13500700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 13518738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_LARGEST_CLASSID; 13528738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_OBJECT_CLASSID; 13538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscClassIdRegister(const char[],PetscClassId *); 1354d382aafbSBarry Smith 1355d382aafbSBarry Smith /* 1356d382aafbSBarry Smith Routines that get memory usage information from the OS 1357d382aafbSBarry Smith */ 13588738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryGetCurrentUsage(PetscLogDouble *); 13598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryGetMaximumUsage(PetscLogDouble *); 13608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemorySetGetMaximumUsage(void); 13618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryShowUsage(PetscViewer,const char[]); 1362d382aafbSBarry Smith 1363ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInfoAllow(PetscBool ,const char []); 13648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetTime(PetscLogDouble*); 13658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetCPUTime(PetscLogDouble*); 13668738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSleep(PetscReal); 1367d382aafbSBarry Smith 1368d382aafbSBarry Smith /* 1369d382aafbSBarry Smith Initialization of PETSc 1370d382aafbSBarry Smith */ 13718738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitialize(int*,char***,const char[],const char[]); 1372d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL)) 13738738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitializeNoArguments(void); 1374ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitialized(PetscBool *); 1375ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFinalized(PetscBool *); 13768738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFinalize(void); 1377d382aafbSBarry Smith EXTERN PetscErrorCode PetscInitializeFortran(void); 13788738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArgs(int*,char ***); 13798738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArguments(char ***); 13808738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFreeArguments(char **); 1381d382aafbSBarry Smith 13828738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscEnd(void); 13838738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSysInitializePackage(const char[]); 1384d382aafbSBarry Smith 1385d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD; 13868738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 13878738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPSpawn(PetscMPIInt); 13888738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPFinalize(void); 13898738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 13908738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 13918738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPFree(MPI_Comm,void*); 13928738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPMalloc(MPI_Comm,size_t,void**); 1393d382aafbSBarry Smith 13948738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonInitialize(const char[],const char[]); 13958738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonFinalize(void); 1396e0ab9aedSLisandro Dalcin EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonPrintError(void); 1397d382aafbSBarry Smith 1398d382aafbSBarry Smith /* 1399d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 1400d382aafbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be 1401d382aafbSBarry Smith C++. 1402d382aafbSBarry Smith */ 1403d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void); 1404d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void); 1405d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1406d382aafbSBarry Smith 1407d382aafbSBarry Smith /* 1408d382aafbSBarry Smith PetscTryMethod - Queries an object for a method, if it exists then calls it. 1409d382aafbSBarry Smith These are intended to be used only inside PETSc functions. 1410503cfb0cSBarry Smith 1411503cfb0cSBarry Smith Level: developer 1412503cfb0cSBarry Smith 1413503cfb0cSBarry Smith .seealso: PetscUseMethod() 1414d382aafbSBarry Smith */ 1415d382aafbSBarry Smith #define PetscTryMethod(obj,A,B,C) \ 1416d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1417d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1418d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1419d382aafbSBarry Smith } 1420503cfb0cSBarry Smith 1421503cfb0cSBarry Smith /* 1422503cfb0cSBarry Smith PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error. 1423503cfb0cSBarry Smith These are intended to be used only inside PETSc functions. 1424503cfb0cSBarry Smith 1425503cfb0cSBarry Smith Level: developer 1426503cfb0cSBarry Smith 1427503cfb0cSBarry Smith .seealso: PetscTryMethod() 1428503cfb0cSBarry Smith */ 1429d382aafbSBarry Smith #define PetscUseMethod(obj,A,B,C) \ 1430d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1431d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1432d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1433be015529SBarry Smith else SETERRQ1(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \ 1434d382aafbSBarry Smith } 1435503cfb0cSBarry Smith 1436d382aafbSBarry Smith /* 1437d382aafbSBarry Smith Functions that can act on any PETSc object. 1438d382aafbSBarry Smith */ 14398738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCreate(MPI_Comm,PetscObject*); 14408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCreateGeneric(MPI_Comm, PetscClassId, const char [], PetscObject *); 14418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDestroy(PetscObject); 14428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetComm(PetscObject,MPI_Comm *); 14438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetClassId(PetscObject,PetscClassId *); 14448738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetType(PetscObject,const char []); 14458738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetType(PetscObject,const char *[]); 14468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetName(PetscObject,const char[]); 14478738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetName(PetscObject,const char*[]); 1448317d6ea6SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]); 14498738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetTabLevel(PetscObject,PetscInt); 14508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetTabLevel(PetscObject,PetscInt*); 14518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 14528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectReference(PetscObject); 14538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetReference(PetscObject,PetscInt*); 14548738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDereference(PetscObject); 14558738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 14568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectView(PetscObject,PetscViewer); 14578738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCompose(PetscObject,const char[],PetscObject); 14588738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectQuery(PetscObject,const char[],PetscObject *); 14598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 14608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetFromOptions(PetscObject); 14618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetUp(PetscObject); 14628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 14638738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*); 14648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectProcessOptionsHandlers(PetscObject); 14658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDestroyOptionsHandlers(PetscObject); 1466d382aafbSBarry Smith 1467d382aafbSBarry Smith /*MC 1468d382aafbSBarry Smith PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1469d382aafbSBarry Smith 1470eca87e8dSBarry Smith Synopsis: 1471eca87e8dSBarry Smith PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1472eca87e8dSBarry Smith 1473ad4df100SBarry Smith Logically Collective on PetscObject 1474d382aafbSBarry Smith 1475d382aafbSBarry Smith Input Parameters: 1476d382aafbSBarry Smith + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1477d382aafbSBarry Smith PetscObjectCompose((PetscObject)mat,...); 1478d382aafbSBarry Smith . name - name associated with the child function 1479d382aafbSBarry Smith . fname - name of the function 1480d382aafbSBarry Smith - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1481d382aafbSBarry Smith 1482d382aafbSBarry Smith Level: advanced 1483d382aafbSBarry Smith 1484d382aafbSBarry Smith 1485d382aafbSBarry Smith Notes: 1486d382aafbSBarry Smith To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1487d382aafbSBarry Smith 1488d382aafbSBarry Smith PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1489d382aafbSBarry Smith Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1490d382aafbSBarry Smith 1491d382aafbSBarry Smith The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 149220de1f94SBarry Smith work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading) 1493d382aafbSBarry Smith enabled. 1494d382aafbSBarry Smith 1495d382aafbSBarry Smith Concepts: objects^composing functions 1496d382aafbSBarry Smith Concepts: composing functions 1497d382aafbSBarry Smith Concepts: functions^querying 1498d382aafbSBarry Smith Concepts: objects^querying 1499d382aafbSBarry Smith Concepts: querying objects 1500d382aafbSBarry Smith 1501d382aafbSBarry Smith .seealso: PetscObjectQueryFunction() 1502d382aafbSBarry Smith M*/ 1503d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1504d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1505d382aafbSBarry Smith #else 1506d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1507d382aafbSBarry Smith #endif 1508d382aafbSBarry Smith 15098738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 15108738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetOptionsPrefix(PetscObject,const char[]); 15118738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 15128738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 15138738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 15149fb22e1aSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAMSPublish(PetscObject); 1515c457296dSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectUnPublish(PetscObject); 15168738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectChangeTypeName(PetscObject,const char[]); 15178738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectRegisterDestroy(PetscObject); 15188738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectRegisterDestroyAll(void); 15198738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectName(PetscObject); 1520ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTypeCompare(PetscObject,const char[],PetscBool *); 15218738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRegisterFinalize(PetscErrorCode (*)(void)); 15228738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRegisterFinalizeAll(void); 1523d382aafbSBarry Smith 1524d382aafbSBarry Smith /* 1525d382aafbSBarry Smith Defines PETSc error handling. 1526d382aafbSBarry Smith */ 1527d382aafbSBarry Smith #include "petscerror.h" 1528d382aafbSBarry Smith 1529d382aafbSBarry Smith /*S 1530503cfb0cSBarry Smith PetscOList - Linked list of PETSc objects, each accessable by string name 1531d382aafbSBarry Smith 15321d0fab5eSBarry Smith Level: developer 1533d382aafbSBarry Smith 15341d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 15351d0fab5eSBarry Smith 15361d0fab5eSBarry Smith .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery() 1537d382aafbSBarry Smith S*/ 1538d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList; 1539d382aafbSBarry Smith 15408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListDestroy(PetscOList); 15418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListFind(PetscOList,const char[],PetscObject*); 15428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListReverseFind(PetscOList,PetscObject,char**); 15438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListAdd(PetscOList *,const char[],PetscObject); 15448738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListDuplicate(PetscOList,PetscOList *); 1545d382aafbSBarry Smith 1546d382aafbSBarry Smith /* 1547503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1548d382aafbSBarry Smith link libraries that will be loaded as needed. 1549d382aafbSBarry Smith */ 15508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 15518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListDestroy(PetscFList*); 15528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListFind(PetscFList,MPI_Comm,const char[],void (**)(void)); 15538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1554d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1555d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1556d382aafbSBarry Smith #else 1557d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1558d382aafbSBarry Smith #endif 15598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListDuplicate(PetscFList,PetscFList *); 15608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListView(PetscFList,PetscViewer); 15618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListConcat(const char [],const char [],char []); 15628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListGet(PetscFList,char ***,int*); 1563d382aafbSBarry Smith 1564d382aafbSBarry Smith /*S 1565d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1566d382aafbSBarry Smith 1567d382aafbSBarry Smith Level: advanced 1568d382aafbSBarry Smith 156920de1f94SBarry Smith --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries 1570d382aafbSBarry Smith 1571d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1572d382aafbSBarry Smith S*/ 1573d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 15748738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscDLLibrary DLLibrariesLoaded; 15758738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 15768738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 15778738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 15788738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryPrintPath(PetscDLLibrary); 1579ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 15808738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 15818738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryClose(PetscDLLibrary); 15828738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1583d382aafbSBarry Smith 1584d382aafbSBarry Smith /* 158505846914SDmitry Karpeev PetscFwk support. Needs to be documented. 158605846914SDmitry Karpeev Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc. 158705846914SDmitry Karpeev */ 158805846914SDmitry Karpeev #include "petscfwk.h" 158905846914SDmitry Karpeev 159005846914SDmitry Karpeev /* 1591d382aafbSBarry Smith Useful utility routines 1592d382aafbSBarry Smith */ 15938738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 15948738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 15958738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1596d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1)) 1597d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1)) 15988738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1599d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1)) 1600d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1)) 16018738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBarrier(PetscObject); 16028738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMPIDump(FILE*); 1603d382aafbSBarry Smith 1604503cfb0cSBarry Smith /* 1605ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1606503cfb0cSBarry Smith 1607503cfb0cSBarry Smith Notes: This is useful in cases like 1608503cfb0cSBarry Smith $ int *a; 1609ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 1610ace3abfcSBarry Smith where !a does not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1611503cfb0cSBarry Smith */ 1612d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1613503cfb0cSBarry Smith 1614d382aafbSBarry Smith /* 1615d382aafbSBarry Smith Defines basic graphics available from PETSc. 1616d382aafbSBarry Smith */ 1617d382aafbSBarry Smith #include "petscdraw.h" 1618d382aafbSBarry Smith 1619d382aafbSBarry Smith /* 1620d382aafbSBarry Smith Defines the base data structures for all PETSc objects 1621d382aafbSBarry Smith */ 1622d382aafbSBarry Smith #include "private/petscimpl.h" 1623503cfb0cSBarry Smith 1624d382aafbSBarry Smith /* 1625d382aafbSBarry Smith Defines PETSc profiling. 1626d382aafbSBarry Smith */ 1627d382aafbSBarry Smith #include "petsclog.h" 1628d382aafbSBarry Smith 1629d382aafbSBarry Smith /* 1630b3506946SBarry Smith For locking, unlocking and destroying AMS memories associated with PETSc objects. ams.h is included in petscviewer.h 1631d382aafbSBarry Smith */ 1632b3506946SBarry Smith #if defined(PETSC_HAVE_AMS) 1633ace3abfcSBarry Smith extern PetscBool PetscAMSPublishAll; 1634b3506946SBarry Smith #define PetscObjectTakeAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem)) 1635b3506946SBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem)) 1636b3506946SBarry Smith #define PetscObjectDepublish(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1; 1637b3506946SBarry Smith #else 1638d382aafbSBarry Smith #define PetscObjectTakeAccess(obj) 0 1639d382aafbSBarry Smith #define PetscObjectGrantAccess(obj) 0 1640d382aafbSBarry Smith #define PetscObjectDepublish(obj) 0 1641b3506946SBarry Smith #endif 1642d382aafbSBarry Smith 1643d382aafbSBarry Smith /* 1644d382aafbSBarry Smith Simple PETSc parallel IO for ASCII printing 1645d382aafbSBarry Smith */ 16468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFixFilename(const char[],char[]); 16478738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 16488738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFClose(MPI_Comm,FILE*); 16498738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_PRINTF_FORMAT_CHECK(3,4); 16508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPrintf(MPI_Comm,const char[],...) PETSC_PRINTF_FORMAT_CHECK(2,3); 16518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSNPrintf(char*,size_t,const char [],...); 1652d382aafbSBarry Smith 1653d382aafbSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1654d382aafbSBarry Smith #include <stdarg.h> 1655c9a19010SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 16568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT (*PetscVFPrintf)(FILE*,const char[],va_list); 16578738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscVFPrintfDefault(FILE*,const char[],va_list); 1658d382aafbSBarry Smith 1659d382aafbSBarry Smith /*MC 1660d382aafbSBarry Smith PetscErrorPrintf - Prints error messages. 1661d382aafbSBarry Smith 1662d382aafbSBarry Smith Synopsis: 1663d382aafbSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1664d382aafbSBarry Smith 1665eca87e8dSBarry Smith Not Collective 1666eca87e8dSBarry Smith 1667d382aafbSBarry Smith Input Parameters: 1668d382aafbSBarry Smith . format - the usual printf() format string 1669d382aafbSBarry Smith 1670d382aafbSBarry Smith Options Database Keys: 1671d382aafbSBarry Smith + -error_output_stdout - cause error messages to be printed to stdout instead of the 1672d382aafbSBarry Smith (default) stderr 1673d382aafbSBarry Smith - -error_output_none to turn off all printing of error messages (does not change the way the 1674d382aafbSBarry Smith error is handled.) 1675d382aafbSBarry Smith 1676d382aafbSBarry Smith Notes: Use 1677d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1678d382aafbSBarry Smith $ error is handled.) and 1679d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1680c9a19010SBarry Smith $ of you can use your own function 1681d382aafbSBarry Smith 1682d382aafbSBarry Smith Use 1683d382aafbSBarry Smith PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1684d382aafbSBarry Smith PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1685d382aafbSBarry Smith 1686d382aafbSBarry Smith Use 1687d382aafbSBarry Smith PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1688d382aafbSBarry Smith 1689d382aafbSBarry Smith Level: developer 1690d382aafbSBarry Smith 1691d382aafbSBarry Smith Fortran Note: 1692d382aafbSBarry Smith This routine is not supported in Fortran. 1693d382aafbSBarry Smith 1694d382aafbSBarry Smith Concepts: error messages^printing 1695d382aafbSBarry Smith Concepts: printing^error messages 1696d382aafbSBarry Smith 1697c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf() 1698d382aafbSBarry Smith M*/ 16998738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1700d382aafbSBarry Smith 1701d382aafbSBarry Smith /*MC 1702d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1703d382aafbSBarry Smith 1704d382aafbSBarry Smith Synopsis: 1705d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1706d382aafbSBarry Smith 1707eca87e8dSBarry Smith Not Collective 1708eca87e8dSBarry Smith 1709d382aafbSBarry Smith Input Parameters: 1710d382aafbSBarry Smith . format - the usual printf() format string 1711d382aafbSBarry Smith 1712d382aafbSBarry Smith Level: developer 1713d382aafbSBarry Smith 1714d382aafbSBarry Smith Fortran Note: 1715d382aafbSBarry Smith This routine is not supported in Fortran. 1716d382aafbSBarry Smith 1717d382aafbSBarry Smith Concepts: help messages^printing 1718d382aafbSBarry Smith Concepts: printing^help messages 1719d382aafbSBarry Smith 1720d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1721d382aafbSBarry Smith M*/ 17228738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1723d382aafbSBarry Smith 1724d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1725d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1726d382aafbSBarry Smith EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1727d382aafbSBarry Smith 1728d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 17298738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 17308738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPClose(MPI_Comm,FILE*); 1731d382aafbSBarry Smith #endif 1732d382aafbSBarry Smith 17338738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedPrintf(MPI_Comm,const char[],...) PETSC_PRINTF_FORMAT_CHECK(2,3); 17348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_PRINTF_FORMAT_CHECK(3,4); 17358738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFlush(MPI_Comm); 17368738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 17378738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 17388738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 17398738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetPetscDir(const char*[]); 1740d382aafbSBarry Smith 17418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1742d382aafbSBarry Smith 1743d382aafbSBarry Smith /*S 1744d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1745d382aafbSBarry Smith 1746d382aafbSBarry Smith Level: advanced 1747d382aafbSBarry Smith 1748d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1749d382aafbSBarry Smith S*/ 17508738c821SJed Brown extern PetscClassId PETSCSYS_DLLEXPORT PETSC_CONTAINER_CLASSID; 1751d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 17528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerGetPointer(PetscContainer,void **); 17538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerSetPointer(PetscContainer,void *); 17548738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerDestroy(PetscContainer); 17558738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerCreate(MPI_Comm,PetscContainer *); 17568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1757d382aafbSBarry Smith 1758d382aafbSBarry Smith /* 1759d382aafbSBarry Smith For use in debuggers 1760d382aafbSBarry Smith */ 17618738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscMPIInt PetscGlobalRank; 17628738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscMPIInt PetscGlobalSize; 17638738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscIntView(PetscInt,const PetscInt[],PetscViewer); 17648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRealView(PetscInt,const PetscReal[],PetscViewer); 17658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1766d382aafbSBarry Smith 1767d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H) 1768d382aafbSBarry Smith #include <memory.h> 1769d382aafbSBarry Smith #endif 1770d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1771d382aafbSBarry Smith #include <stdlib.h> 1772d382aafbSBarry Smith #endif 1773d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H) 1774d382aafbSBarry Smith #include <strings.h> 1775d382aafbSBarry Smith #endif 1776d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H) 1777d382aafbSBarry Smith #include <string.h> 1778d382aafbSBarry Smith #endif 17796c7e564aSBarry Smith 17806c7e564aSBarry Smith 1781d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H) 1782d382aafbSBarry Smith #include <xmmintrin.h> 1783d382aafbSBarry Smith #endif 1784d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H) 1785d382aafbSBarry Smith #include <stdint.h> 1786d382aafbSBarry Smith #endif 1787d382aafbSBarry Smith 1788d382aafbSBarry Smith /*@C 1789d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1790d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1791d382aafbSBarry Smith PetscMemmove() in that case. 1792d382aafbSBarry Smith 1793d382aafbSBarry Smith Not Collective 1794d382aafbSBarry Smith 1795d382aafbSBarry Smith Input Parameters: 1796d382aafbSBarry Smith + b - pointer to initial memory space 1797d382aafbSBarry Smith - n - length (in bytes) of space to copy 1798d382aafbSBarry Smith 1799d382aafbSBarry Smith Output Parameter: 1800d382aafbSBarry Smith . a - pointer to copy space 1801d382aafbSBarry Smith 1802d382aafbSBarry Smith Level: intermediate 1803d382aafbSBarry Smith 1804d382aafbSBarry Smith Compile Option: 1805d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1806d382aafbSBarry Smith for memory copies on double precision values. 1807d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1808d382aafbSBarry Smith for memory copies on double precision values. 1809d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1810d382aafbSBarry Smith for memory copies on double precision values. 1811d382aafbSBarry Smith 1812d382aafbSBarry Smith Note: 1813d382aafbSBarry Smith This routine is analogous to memcpy(). 1814d382aafbSBarry Smith 1815503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1816503cfb0cSBarry Smith 1817d382aafbSBarry Smith Concepts: memory^copying 1818d382aafbSBarry Smith Concepts: copying^memory 1819d382aafbSBarry Smith 1820d382aafbSBarry Smith .seealso: PetscMemmove() 1821d382aafbSBarry Smith 1822d382aafbSBarry Smith @*/ 18238738c821SJed Brown PETSC_STATIC_INLINE PetscErrorCode PETSCSYS_DLLEXPORT PetscMemcpy(void *a,const void *b,size_t n) 1824d382aafbSBarry Smith { 1825d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1826d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1827d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1828e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1829e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1830d382aafbSBarry Smith #endif 1831d382aafbSBarry Smith PetscFunctionBegin; 1832d382aafbSBarry Smith if (a != b) { 1833d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1834d382aafbSBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) { 1835e32f2f54SBarry Smith SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1836d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1837d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1838d382aafbSBarry Smith } 1839d382aafbSBarry Smith #endif 1840d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1841d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1842d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1843d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1844d382aafbSBarry Smith PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1845d382aafbSBarry Smith BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1846d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1847d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1848d382aafbSBarry Smith #else 1849d382aafbSBarry Smith size_t i; 1850d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1851d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1852d382aafbSBarry Smith #endif 1853d382aafbSBarry Smith } else { 1854d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1855d382aafbSBarry Smith } 1856d382aafbSBarry Smith #elif defined(PETSC_HAVE__INTEL_FAST_MEMCPY) 1857d382aafbSBarry Smith _intel_fast_memcpy((char*)(a),(char*)(b),n); 1858d382aafbSBarry Smith #else 1859d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1860d382aafbSBarry Smith #endif 1861d382aafbSBarry Smith } 1862d382aafbSBarry Smith PetscFunctionReturn(0); 1863d382aafbSBarry Smith } 1864d382aafbSBarry Smith 1865d382aafbSBarry Smith /*@C 1866d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith Not Collective 1869d382aafbSBarry Smith 1870d382aafbSBarry Smith Input Parameters: 1871d382aafbSBarry Smith + a - pointer to beginning memory location 1872d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1873d382aafbSBarry Smith 1874d382aafbSBarry Smith Level: intermediate 1875d382aafbSBarry Smith 1876d382aafbSBarry Smith Compile Option: 1877d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1878d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1879d382aafbSBarry Smith 1880503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1881503cfb0cSBarry Smith 1882d382aafbSBarry Smith Concepts: memory^zeroing 1883d382aafbSBarry Smith Concepts: zeroing^memory 1884d382aafbSBarry Smith 1885d382aafbSBarry Smith .seealso: PetscMemcpy() 1886d382aafbSBarry Smith @*/ 18878738c821SJed Brown PETSC_STATIC_INLINE PetscErrorCode PETSCSYS_DLLEXPORT PetscMemzero(void *a,size_t n) 1888d382aafbSBarry Smith { 1889d382aafbSBarry Smith if (n > 0) { 1890d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1891e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1892d382aafbSBarry Smith #endif 1893d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1894d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1895d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1896d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1897d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1898d382aafbSBarry Smith } else { 1899d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1900d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1901d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1902d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1903d382aafbSBarry Smith } else { 1904d382aafbSBarry Smith #endif 1905d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1906d382aafbSBarry Smith bzero((char *)a,n); 1907d382aafbSBarry Smith #elif defined (PETSC_HAVE__INTEL_FAST_MEMSET) 1908d382aafbSBarry Smith _intel_fast_memset((char*)a,0,n); 1909d382aafbSBarry Smith #else 1910d382aafbSBarry Smith memset((char*)a,0,n); 1911d382aafbSBarry Smith #endif 1912d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1913d382aafbSBarry Smith } 1914d382aafbSBarry Smith #endif 1915d382aafbSBarry Smith } 1916d382aafbSBarry Smith return 0; 1917d382aafbSBarry Smith } 1918d382aafbSBarry Smith 1919d382aafbSBarry Smith /*MC 1920d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1921d382aafbSBarry Smith 1922eca87e8dSBarry Smith Synopsis: 1923eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1924eca87e8dSBarry Smith 1925d382aafbSBarry Smith Not Collective 1926d382aafbSBarry Smith 1927d382aafbSBarry Smith Input Parameters: 1928d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1929d382aafbSBarry Smith . n - number of elements to fetch 1930d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 193150d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1932d382aafbSBarry Smith 1933d382aafbSBarry Smith Level: developer 1934d382aafbSBarry Smith 1935d382aafbSBarry Smith Notes: 1936d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1937d382aafbSBarry Smith 193850d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 193950d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 194050d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 194163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 194263cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 194363cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1944d382aafbSBarry Smith 1945d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1946d382aafbSBarry Smith address). 1947d382aafbSBarry Smith 1948d382aafbSBarry Smith Concepts: memory 1949d382aafbSBarry Smith M*/ 1950d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1951d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1952d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1953d382aafbSBarry Smith } while (0) 1954d382aafbSBarry Smith 1955d382aafbSBarry Smith /* 1956d382aafbSBarry Smith Allows accessing Matlab Engine 1957d382aafbSBarry Smith */ 1958d382aafbSBarry Smith #include "petscmatlab.h" 1959d382aafbSBarry Smith 1960d382aafbSBarry Smith /* 1961d382aafbSBarry Smith Determine if some of the kernel computation routines use 1962d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1963d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1964d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1965e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1966d382aafbSBarry Smith */ 1967d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1968d382aafbSBarry Smith 1969d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1970d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1971d382aafbSBarry Smith #endif 1972d382aafbSBarry Smith 19735a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19745a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1975d382aafbSBarry Smith #endif 1976d382aafbSBarry Smith 1977d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1978d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1979d382aafbSBarry Smith #endif 1980d382aafbSBarry Smith 1981d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1982d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1983d382aafbSBarry Smith #endif 1984d382aafbSBarry Smith 1985d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1986d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1987d382aafbSBarry Smith #endif 1988d382aafbSBarry Smith 1989d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1990d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1991d382aafbSBarry Smith #endif 1992d382aafbSBarry Smith 1993d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1994d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1995d382aafbSBarry Smith #endif 1996d382aafbSBarry Smith 1997d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1998d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1999d382aafbSBarry Smith #endif 2000d382aafbSBarry Smith 2001d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2002d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2003d382aafbSBarry Smith #endif 2004d382aafbSBarry Smith 2005d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2006d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2007d382aafbSBarry Smith #endif 2008d382aafbSBarry Smith 2009d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2010d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2011d382aafbSBarry Smith #endif 2012d382aafbSBarry Smith 2013d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2014d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2015d382aafbSBarry Smith #endif 2016d382aafbSBarry Smith 2017d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2018d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2019d382aafbSBarry Smith #endif 2020d382aafbSBarry Smith 2021d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2022d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2023d382aafbSBarry Smith #endif 2024d382aafbSBarry Smith 2025d382aafbSBarry Smith #endif 2026d382aafbSBarry Smith 2027d382aafbSBarry Smith /* 2028d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2029d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2030d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2031d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2032d382aafbSBarry Smith ugly extern "C" {} wrappers. 2033d382aafbSBarry Smith */ 2034d382aafbSBarry Smith #if defined(__cplusplus) 2035d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 2036d382aafbSBarry Smith #define EXTERN_C_END } 2037d382aafbSBarry Smith #else 2038d382aafbSBarry Smith #define EXTERN_C_BEGIN 2039d382aafbSBarry Smith #define EXTERN_C_END 2040d382aafbSBarry Smith #endif 2041d382aafbSBarry Smith 2042d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2043d382aafbSBarry Smith 2044d382aafbSBarry Smith /*MC 2045d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2046d382aafbSBarry Smith communication 2047d382aafbSBarry Smith 2048d382aafbSBarry Smith Level: beginner 2049d382aafbSBarry Smith 2050d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2051d382aafbSBarry Smith 2052d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2053d382aafbSBarry Smith M*/ 2054d382aafbSBarry Smith 2055d382aafbSBarry Smith /*MC 2056d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 2057d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 2058d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 2059d382aafbSBarry Smith 2060d382aafbSBarry Smith 2061d382aafbSBarry Smith Level: beginner 2062d382aafbSBarry Smith 2063d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 2064d382aafbSBarry Smith M*/ 2065d382aafbSBarry Smith 2066d382aafbSBarry Smith /*MC 2067d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 2068d382aafbSBarry Smith 2069d382aafbSBarry Smith Level: beginner 2070d382aafbSBarry Smith 2071d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 2072d382aafbSBarry Smith M*/ 2073d382aafbSBarry Smith 2074d382aafbSBarry Smith /*MC 2075d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 2076d382aafbSBarry Smith Level: beginner 2077d382aafbSBarry Smith 2078d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 2079d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2080d382aafbSBarry Smith 2081d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 2082d382aafbSBarry Smith M*/ 2083d382aafbSBarry Smith 2084d382aafbSBarry Smith /*MC 2085d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 2086d382aafbSBarry Smith 2087d382aafbSBarry Smith Level: beginner 2088d382aafbSBarry Smith 2089d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 2090d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2091d382aafbSBarry Smith 2092d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2093d382aafbSBarry Smith M*/ 2094d382aafbSBarry Smith 2095d382aafbSBarry Smith /*MC 2096d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2097d382aafbSBarry Smith 2098d382aafbSBarry Smith Level: beginner 2099d382aafbSBarry Smith 2100d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2101d382aafbSBarry Smith pass this value 2102d382aafbSBarry Smith 2103d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2104d382aafbSBarry Smith M*/ 2105d382aafbSBarry Smith 2106d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2107d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2108d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2109d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2110d382aafbSBarry Smith #else 2111d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2112d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2113d382aafbSBarry Smith #endif 2114d382aafbSBarry Smith #endif 2115d382aafbSBarry Smith 2116d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2117d382aafbSBarry Smith 2118d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2119d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2120d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2121d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2122d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2123d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2124d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2125d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX 2147483647 2126d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647 2127d382aafbSBarry Smith 2128d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2129e32f2f54SBarry Smith #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2130e32f2f54SBarry Smith #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2131d382aafbSBarry Smith #define PetscMPIIntCast(a) (a);PetscMPIIntCheck(a) 2132d382aafbSBarry Smith #define PetscBLASIntCast(a) (a);PetscBLASIntCheck(a) 2133d382aafbSBarry Smith 2134d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4) 2135e32f2f54SBarry Smith #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2136d382aafbSBarry Smith #define PetscHDF5IntCast(a) (a);PetscHDF5IntCheck(a) 2137d382aafbSBarry Smith #else 2138d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2139d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2140d382aafbSBarry Smith #endif 2141d382aafbSBarry Smith 2142d382aafbSBarry Smith #else 2143d382aafbSBarry Smith #define PetscMPIIntCheck(a) 2144d382aafbSBarry Smith #define PetscBLASIntCheck(a) 2145d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2146d382aafbSBarry Smith #define PetscMPIIntCast(a) a 2147d382aafbSBarry Smith #define PetscBLASIntCast(a) a 2148d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2149d382aafbSBarry Smith #endif 2150d382aafbSBarry Smith 2151d382aafbSBarry Smith 2152d382aafbSBarry Smith /* 2153d382aafbSBarry Smith The IBM include files define hz, here we hide it so that it may be used 2154d382aafbSBarry Smith as a regular user variable. 2155d382aafbSBarry Smith */ 2156d382aafbSBarry Smith #if defined(hz) 2157d382aafbSBarry Smith #undef hz 2158d382aafbSBarry Smith #endif 2159d382aafbSBarry Smith 2160d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2161d382aafbSBarry Smith 2162d382aafbSBarry Smith 2163d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2164d382aafbSBarry Smith #include <limits.h> 2165d382aafbSBarry Smith #endif 2166d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2167d382aafbSBarry Smith #include <sys/param.h> 2168d382aafbSBarry Smith #endif 2169d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2170d382aafbSBarry Smith #include <sys/types.h> 2171d382aafbSBarry Smith #endif 2172d382aafbSBarry Smith #if defined(MAXPATHLEN) 2173d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2174d382aafbSBarry Smith #elif defined(MAX_PATH) 2175d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2176d382aafbSBarry Smith #elif defined(_MAX_PATH) 2177d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2178d382aafbSBarry Smith #else 2179d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2180d382aafbSBarry Smith #endif 2181d382aafbSBarry Smith 2182d382aafbSBarry Smith /* Special support for C++ */ 2183d382aafbSBarry Smith #include "petscsys.hh" 21846c7e564aSBarry Smith 2185d382aafbSBarry Smith 2186d382aafbSBarry Smith /*MC 2187d382aafbSBarry Smith 2188d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2189d382aafbSBarry Smith 2190d382aafbSBarry Smith $ 1) classic Fortran 77 style 2191d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc 2192d382aafbSBarry Smith $ XXX variablename 2193d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2194d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2195d382aafbSBarry Smith $ 2196d382aafbSBarry Smith $ 2) classic Fortran 90 style 2197d1716517SSatish Balay $#include "finclude/petscXXX.h" 2198d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2199d382aafbSBarry Smith $ XXX variablename 2200d382aafbSBarry Smith $ 2201d382aafbSBarry Smith $ 3) Using Fortran modules 2202d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2203d382aafbSBarry Smith $ use petscXXXX 2204d382aafbSBarry Smith $ XXX variablename 2205d382aafbSBarry Smith $ 2206d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2207d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2208d382aafbSBarry Smith $ use petscXXXX 2209d382aafbSBarry Smith $ type(XXX) variablename 2210e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2211d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2212d382aafbSBarry Smith 2213d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2214d382aafbSBarry Smith 2215d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2216d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2217d382aafbSBarry Smith $ integer variablename 2218d382aafbSBarry Smith $ 2219d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2220d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2221d382aafbSBarry Smith 2222d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2223d382aafbSBarry Smith for only a few PETSc functions. 2224d382aafbSBarry Smith 2225d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2226d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2227d382aafbSBarry Smith you cannot have something like 2228d382aafbSBarry Smith $ PetscInt row,col 2229d382aafbSBarry Smith $ PetscScalar val 2230d382aafbSBarry Smith $ ... 2231d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2232d382aafbSBarry Smith You must instead have 2233d382aafbSBarry Smith $ PetscInt row(1),col(1) 2234d382aafbSBarry Smith $ PetscScalar val(1) 2235d382aafbSBarry Smith $ ... 2236d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2237d382aafbSBarry Smith 2238d382aafbSBarry Smith 2239d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2240d382aafbSBarry Smith 2241d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2242d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2243d382aafbSBarry Smith 2244d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2245d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2246d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2247d382aafbSBarry Smith 2248d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2249e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2250d382aafbSBarry Smith 2251d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2252d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2253d382aafbSBarry Smith 2254d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2255d382aafbSBarry Smith automatically by "make allfortranstubs". 2256d382aafbSBarry Smith 2257e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2258d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2259d382aafbSBarry Smith include their predecessors 2260d382aafbSBarry Smith 2261d382aafbSBarry Smith Level: beginner 2262d382aafbSBarry Smith 2263d382aafbSBarry Smith M*/ 2264d382aafbSBarry Smith 22658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArchType(char[],size_t); 22668738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetHostName(char[],size_t); 22678738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetUserName(char[],size_t); 22688738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetProgramName(char[],size_t); 22698738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetProgramName(const char[]); 22708738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetDate(char[],size_t); 2271d382aafbSBarry Smith 22728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortInt(PetscInt,PetscInt[]); 22738738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 22748738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 22758738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 22768738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 22778738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 22788738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 22798738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortReal(PetscInt,PetscReal[]); 22808738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 22818738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 22828738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2283ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2284d382aafbSBarry Smith 22858738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDisplay(void); 22868738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetDisplay(char[],size_t); 2287d382aafbSBarry Smith 2288d382aafbSBarry Smith /*E 2289d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2290d382aafbSBarry Smith with an optional dynamic library name, for example 2291d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2292d382aafbSBarry Smith 2293d382aafbSBarry Smith Level: beginner 2294d382aafbSBarry Smith 2295e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2296d382aafbSBarry Smith with the option --download-sprng 2297d382aafbSBarry Smith 2298d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom 2299d382aafbSBarry Smith E*/ 2300d382aafbSBarry Smith #define PetscRandomType char* 2301d382aafbSBarry Smith #define PETSCRAND "rand" 2302d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2303d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2304d382aafbSBarry Smith 2305d382aafbSBarry Smith /* Logging support */ 23068738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_RANDOM_CLASSID; 2307d382aafbSBarry Smith 23088738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomInitializePackage(const char[]); 2309d382aafbSBarry Smith 2310d382aafbSBarry Smith /*S 2311d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2312d382aafbSBarry Smith 2313d382aafbSBarry Smith Level: intermediate 2314d382aafbSBarry Smith 2315d382aafbSBarry Smith Concepts: random numbers 2316d382aafbSBarry Smith 2317d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2318d382aafbSBarry Smith S*/ 2319d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2320d382aafbSBarry Smith 2321d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2322d382aafbSBarry Smith extern PetscFList PetscRandomList; 2323ace3abfcSBarry Smith extern PetscBool PetscRandomRegisterAllCalled; 2324d382aafbSBarry Smith 23258738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegisterAll(const char []); 23268738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 23278738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegisterDestroy(void); 23288738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetType(PetscRandom, const PetscRandomType); 23298738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetFromOptions(PetscRandom); 23308738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetType(PetscRandom, const PetscRandomType*); 23318738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomViewFromOptions(PetscRandom,char*); 23328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomView(PetscRandom,PetscViewer); 2333d382aafbSBarry Smith 2334d382aafbSBarry Smith /*MC 2335d382aafbSBarry Smith PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2336d382aafbSBarry Smith 2337d382aafbSBarry Smith Synopsis: 23381890ba74SBarry Smith PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2339d382aafbSBarry Smith 2340d382aafbSBarry Smith Not Collective 2341d382aafbSBarry Smith 2342d382aafbSBarry Smith Input Parameters: 2343d382aafbSBarry Smith + name - The name of a new user-defined creation routine 2344d382aafbSBarry Smith . path - The path (either absolute or relative) of the library containing this routine 2345d382aafbSBarry Smith . func_name - The name of routine to create method context 2346d382aafbSBarry Smith - create_func - The creation routine itself 2347d382aafbSBarry Smith 2348d382aafbSBarry Smith Notes: 2349d382aafbSBarry Smith PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2350d382aafbSBarry Smith 2351d382aafbSBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2352d382aafbSBarry Smith 2353d382aafbSBarry Smith Sample usage: 2354d382aafbSBarry Smith .vb 2355d382aafbSBarry Smith PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2356d382aafbSBarry Smith .ve 2357d382aafbSBarry Smith 2358d382aafbSBarry Smith Then, your random type can be chosen with the procedural interface via 2359d382aafbSBarry Smith .vb 2360d382aafbSBarry Smith PetscRandomCreate(MPI_Comm, PetscRandom *); 2361d382aafbSBarry Smith PetscRandomSetType(PetscRandom,"my_random_name"); 2362d382aafbSBarry Smith .ve 2363d382aafbSBarry Smith or at runtime via the option 2364d382aafbSBarry Smith .vb 2365d382aafbSBarry Smith -random_type my_random_name 2366d382aafbSBarry Smith .ve 2367d382aafbSBarry Smith 2368d382aafbSBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2369d382aafbSBarry Smith 2370d382aafbSBarry Smith For an example of the code needed to interface your own random number generator see 2371d382aafbSBarry Smith src/sys/random/impls/rand/rand.c 2372d382aafbSBarry Smith 2373d382aafbSBarry Smith Level: advanced 2374d382aafbSBarry Smith 2375d382aafbSBarry Smith .keywords: PetscRandom, register 2376d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2377d382aafbSBarry Smith M*/ 2378d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2379d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2380d382aafbSBarry Smith #else 2381d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2382d382aafbSBarry Smith #endif 2383d382aafbSBarry Smith 23848738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomCreate(MPI_Comm,PetscRandom*); 23858738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetValue(PetscRandom,PetscScalar*); 23868738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetValueReal(PetscRandom,PetscReal*); 23878738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 23888738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 23898738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetSeed(PetscRandom,unsigned long); 23908738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetSeed(PetscRandom,unsigned long *); 23918738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSeed(PetscRandom); 23928738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomDestroy(PetscRandom); 2393d382aafbSBarry Smith 23948738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetFullPath(const char[],char[],size_t); 23958738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetRelativePath(const char[],char[],size_t); 23968738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetWorkingDirectory(char[],size_t); 23978738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetRealPath(const char[],char[]); 23988738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetHomeDirectory(char[],size_t); 2399ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTestFile(const char[],char,PetscBool *); 2400ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTestDirectory(const char[],char,PetscBool *); 2401d382aafbSBarry Smith 24028738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryRead(int,void*,PetscInt,PetscDataType); 24038738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2404ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2405ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 24068738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryOpen(const char[],PetscFileMode,int *); 24078738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryClose(int); 2408ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSharedTmp(MPI_Comm,PetscBool *); 2409ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 24108738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetTmp(MPI_Comm,char[],size_t); 2411ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2412ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 24138738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenSocket(char*,int,int*); 2414a240c4b3SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscWebServe(MPI_Comm,int); 2415d382aafbSBarry Smith 2416d382aafbSBarry Smith /* 2417d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2418d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2419d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2420d382aafbSBarry Smith PetscBinarySeek(). 2421d382aafbSBarry Smith */ 2422d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2423d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2424d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2425d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2426d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2427d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2428d382aafbSBarry Smith 2429d382aafbSBarry Smith /*E 2430d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2431d382aafbSBarry Smith 2432d382aafbSBarry Smith Level: advanced 2433d382aafbSBarry Smith 2434d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2435d382aafbSBarry Smith E*/ 2436d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 24378738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 24388738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2439d382aafbSBarry Smith 24408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebugTerminal(const char[]); 2441ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebugger(const char[],PetscBool ); 24428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDefaultDebugger(void); 24438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebuggerFromString(char*); 24448738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscAttachDebugger(void); 24458738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStopForDebugger(void); 2446d382aafbSBarry Smith 24478738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 24488738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 24498738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 24508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 24518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2452d382aafbSBarry Smith 2453ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2454d382aafbSBarry Smith 2455d382aafbSBarry Smith /*E 2456d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2457d382aafbSBarry Smith 2458d382aafbSBarry Smith Level: beginner 2459d382aafbSBarry Smith 2460d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2461d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2462d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2463d382aafbSBarry Smith E*/ 2464d382aafbSBarry Smith typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES} InsertMode; 2465d382aafbSBarry Smith 2466d382aafbSBarry Smith /*MC 2467d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2468d382aafbSBarry Smith 2469d382aafbSBarry Smith Level: beginner 2470d382aafbSBarry Smith 2471d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2472eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2473eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2474d382aafbSBarry Smith 2475d382aafbSBarry Smith M*/ 2476d382aafbSBarry Smith 2477d382aafbSBarry Smith /*MC 2478d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2479d382aafbSBarry Smith value into that location 2480d382aafbSBarry Smith 2481d382aafbSBarry Smith Level: beginner 2482d382aafbSBarry Smith 2483d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2484eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2485eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2486d382aafbSBarry Smith 2487d382aafbSBarry Smith M*/ 2488d382aafbSBarry Smith 2489d382aafbSBarry Smith /*MC 2490d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2491d382aafbSBarry Smith 2492d382aafbSBarry Smith Level: beginner 2493d382aafbSBarry Smith 2494d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2495d382aafbSBarry Smith 2496d382aafbSBarry Smith M*/ 2497d382aafbSBarry Smith 2498d382aafbSBarry Smith /*S 2499d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2500d382aafbSBarry Smith 2501d382aafbSBarry Smith Level: advanced 2502d382aafbSBarry Smith 2503d382aafbSBarry Smith Concepts: communicator, create 2504d382aafbSBarry Smith S*/ 2505d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2506d382aafbSBarry Smith 2507d382aafbSBarry Smith struct _n_PetscSubcomm { 2508d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2509d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2510d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 2511d382aafbSBarry Smith PetscInt n; /* num of subcommunicators under the parent communicator */ 2512d382aafbSBarry Smith PetscInt color; /* color of processors belong to this communicator */ 2513d382aafbSBarry Smith }; 2514d382aafbSBarry Smith 2515638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 2516638faf0bSHong Zhang extern const char *PetscSubcommTypes[]; 2517638faf0bSHong Zhang 2518d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 25198738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSubcommDestroy(PetscSubcomm); 2520d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2521d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetType(PetscSubcomm,const PetscSubcommType); 25221ba920a7SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt); 2523d382aafbSBarry Smith 2524d382aafbSBarry Smith PETSC_EXTERN_CXX_END 25256c7e564aSBarry Smith 2526d382aafbSBarry Smith #endif 2527