xref: /petsc/include/petscsys.h (revision 236ed0a347ae3d1aa33eaa56e45af1c9d7c021f1)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
11d382aafbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE
12d382aafbSBarry Smith */
13d382aafbSBarry Smith #include "petscconf.h"
14d382aafbSBarry Smith #include "petscfix.h"
15d382aafbSBarry Smith 
1673fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1773fca5a0SBarry Smith /*
1873fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
1973fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2073fca5a0SBarry Smith */
2173fca5a0SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L)
2273fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2373fca5a0SBarry Smith #endif
2473fca5a0SBarry Smith #if defined(PETSC__BSD_SOURCE)
2573fca5a0SBarry Smith #define _BSD_SOURCE
2673fca5a0SBarry Smith #endif
2773fca5a0SBarry Smith #endif
2873fca5a0SBarry Smith 
29d382aafbSBarry Smith /* ========================================================================== */
30d382aafbSBarry Smith /*
31d382aafbSBarry Smith    This facilitates using C version of PETSc from C++ and
32e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
33d382aafbSBarry Smith */
34d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
35d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
36d382aafbSBarry Smith #endif
371ec50b02SJed Brown 
381ec50b02SJed Brown #if defined(__cplusplus)
391ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
401ec50b02SJed Brown #else
411ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
421ec50b02SJed Brown #endif
43d382aafbSBarry Smith 
44d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
45d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
46d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
47d382aafbSBarry Smith #else
48d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
49d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
50d382aafbSBarry Smith #endif
51d382aafbSBarry Smith /* ========================================================================== */
52d382aafbSBarry Smith /*
53d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
54d382aafbSBarry Smith     Web page
55d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
56d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
57d382aafbSBarry Smith     src/docs/website/index.html.
58d382aafbSBarry Smith */
59d382aafbSBarry Smith #include "petscversion.h"
60301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
61d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
62301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
63d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
64301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
65d382aafbSBarry Smith #else
66301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
67301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
68d382aafbSBarry Smith #endif
69d382aafbSBarry Smith 
70d382aafbSBarry Smith /*MC
71d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
72d382aafbSBarry Smith 
73d382aafbSBarry Smith     Input Parameter:
74d382aafbSBarry Smith .   len - length of the string
75d382aafbSBarry Smith 
76d382aafbSBarry Smith     Output Parameter:
77d382aafbSBarry Smith .   version - version string
78d382aafbSBarry Smith 
79d382aafbSBarry Smith     Level: developer
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     Usage:
82d382aafbSBarry Smith     char version[256];
83d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
84d382aafbSBarry Smith 
85d382aafbSBarry Smith     Fortran Note:
86d382aafbSBarry Smith     This routine is not supported in Fortran.
87d382aafbSBarry Smith 
88d382aafbSBarry Smith .seealso: PetscGetProgramName()
89d382aafbSBarry Smith 
90d382aafbSBarry Smith M*/
91d382aafbSBarry Smith 
92d382aafbSBarry Smith /* ========================================================================== */
93d382aafbSBarry Smith 
94d382aafbSBarry Smith /*
95d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
96d382aafbSBarry Smith 
97d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
98d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
99d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
100d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
101d382aafbSBarry Smith     mpicxx.h directly in their code
102d382aafbSBarry Smith */
103d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
104d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
105d382aafbSBarry Smith #include "mpi.h"
10665013866SBarry Smith 
107d382aafbSBarry Smith /*
108d382aafbSBarry Smith     Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
109d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
110d382aafbSBarry Smith 
111d382aafbSBarry Smith     The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense.
112d382aafbSBarry Smith */
113d382aafbSBarry Smith #include <stdio.h>
114d382aafbSBarry Smith 
115d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
116d382aafbSBarry Smith #if !defined(MPIAPI)
117d382aafbSBarry Smith #define MPIAPI
118d382aafbSBarry Smith #endif
119d382aafbSBarry Smith 
120b3506946SBarry Smith 
121d382aafbSBarry Smith /*MC
122d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
123d382aafbSBarry Smith 
124d382aafbSBarry Smith     Level: beginner
125d382aafbSBarry Smith 
126d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
127d382aafbSBarry Smith M*/
128d382aafbSBarry Smith typedef int PetscErrorCode;
129d382aafbSBarry Smith 
130d382aafbSBarry Smith /*MC
131d382aafbSBarry Smith 
132503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
133d382aafbSBarry Smith          (internal integer in the data structure used for error
134d382aafbSBarry Smith          checking). These are all defined by an offset from the lowest
1350700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
136d382aafbSBarry Smith 
137d382aafbSBarry Smith     Level: advanced
138d382aafbSBarry Smith 
1390700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
140d382aafbSBarry Smith M*/
1410700a824SBarry Smith typedef int PetscClassId;
142d382aafbSBarry Smith 
143d382aafbSBarry Smith 
144d382aafbSBarry Smith /*MC
145d382aafbSBarry Smith     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
146d382aafbSBarry Smith 
147d382aafbSBarry Smith     Level: intermediate
148d382aafbSBarry Smith 
149d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1503b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
151287e6e24SBarry Smith            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
1523b2a8c54SBarry Smith 
1533b2a8c54SBarry Smith     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1543b2a8c54SBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
1553b2a8c54SBarry Smith 
1563b2a8c54SBarry Smith     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1573b2a8c54SBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
158d382aafbSBarry Smith 
159287e6e24SBarry Smith     Developer Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
160287e6e24SBarry Smith      if you run ./configure with the option
161287e6e24SBarry Smith      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
162287e6e24SBarry Smith      for example, you can change the int below to long int. Since MATLAB uses the MKL (Intel Math Libraries) it is likely one can
163287e6e24SBarry Smith      purchase a 64 bit integer version of the MKL and use that with a  PetscBLASInt of long int.
164287e6e24SBarry Smith 
165287e6e24SBarry Smith      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
166287e6e24SBarry Smith      be used with PETSc if you have set PetscBLASInt to long int.
167287e6e24SBarry Smith 
168d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt
169d382aafbSBarry Smith 
170d382aafbSBarry Smith M*/
171d382aafbSBarry Smith typedef int PetscBLASInt;
172d382aafbSBarry Smith 
173d382aafbSBarry Smith /*MC
174d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
175d382aafbSBarry Smith 
176d382aafbSBarry Smith     Level: intermediate
177d382aafbSBarry Smith 
178d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1793b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
180d382aafbSBarry Smith 
1813b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
182d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
183d382aafbSBarry Smith 
1843b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
185d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
186d382aafbSBarry Smith 
187d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
188d382aafbSBarry Smith 
189d382aafbSBarry Smith M*/
190d382aafbSBarry Smith typedef int PetscMPIInt;
191d382aafbSBarry Smith 
192d382aafbSBarry Smith /*MC
193d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
194d382aafbSBarry Smith 
195d382aafbSBarry Smith     Level: intermediate
196d382aafbSBarry Smith 
197d382aafbSBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
198d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
199d382aafbSBarry Smith 
200d382aafbSBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
201d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
202d382aafbSBarry Smith 
203d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
204d382aafbSBarry Smith M*/
205d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
206d382aafbSBarry Smith 
207d382aafbSBarry Smith /*MC
208d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
2093b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
210d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
211d382aafbSBarry Smith 
212d382aafbSBarry Smith    Level: intermediate
213d382aafbSBarry Smith 
214d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
215d382aafbSBarry Smith M*/
216*236ed0a3SSatish Balay #if defined(PETSC_HAVE___INT64)
217*236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
218*236ed0a3SSatish Balay #else
219*236ed0a3SSatish Balay typedef long long Petsc64bitInt;
220*236ed0a3SSatish Balay #endif
221d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
222*236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
223d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
224d382aafbSBarry Smith #else
225d382aafbSBarry Smith typedef int PetscInt;
226d382aafbSBarry Smith #define MPIU_INT MPI_INT
227d382aafbSBarry Smith #endif
228*236ed0a3SSatish Balay 
229d382aafbSBarry Smith 
23058b60935SBarry Smith /*EC
23158b60935SBarry Smith 
23258b60935SBarry Smith     PetscPrecision - indicates what precision the object is using
23358b60935SBarry Smith 
23458b60935SBarry Smith     Level: advanced
23558b60935SBarry Smith 
23658b60935SBarry Smith .seealso: PetscObjectSetPrecision()
23758b60935SBarry Smith E*/
23858b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
23958b60935SBarry Smith extern const char *PetscPrecisions[];
24058b60935SBarry Smith 
24158b60935SBarry Smith 
242503cfb0cSBarry Smith /*
243503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
244503cfb0cSBarry Smith */
245d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
246d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
247d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
248d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
249d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
250d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
251d382aafbSBarry Smith #else
252d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
253d382aafbSBarry Smith #endif
254d382aafbSBarry Smith 
255d382aafbSBarry Smith 
256d382aafbSBarry Smith /*
257d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
258d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
259d382aafbSBarry Smith */
260d382aafbSBarry Smith 
261d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
262d382aafbSBarry Smith 
263d382aafbSBarry Smith /*
264d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
265d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
266d382aafbSBarry Smith */
267d382aafbSBarry Smith extern FILE* PETSC_STDERR;
268d382aafbSBarry Smith 
269d382aafbSBarry Smith /*
270d382aafbSBarry Smith       PETSC_ZOPEFD is used to send data to the PETSc webpage.  It can be used
271d382aafbSBarry Smith     in conjunction with PETSC_STDOUT, or by itself.
272d382aafbSBarry Smith */
273d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD;
274d382aafbSBarry Smith 
275d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
276d382aafbSBarry Smith /*MC
277d382aafbSBarry Smith       PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of
278d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
279d382aafbSBarry Smith 
280d382aafbSBarry Smith    Synopsis:
281d382aafbSBarry Smith    PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function))
282d382aafbSBarry Smith 
283eca87e8dSBarry Smith      Not collective
284eca87e8dSBarry Smith 
285d382aafbSBarry Smith    Level: developer
286d382aafbSBarry Smith 
287d382aafbSBarry Smith     Example:
288d382aafbSBarry Smith       PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine
289d382aafbSBarry Smith            PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r)
290d382aafbSBarry Smith 
291d382aafbSBarry Smith .seealso: PetscPolymorphicFunction()
292d382aafbSBarry Smith 
293d382aafbSBarry Smith M*/
294d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;}
295d382aafbSBarry Smith 
296d382aafbSBarry Smith /*MC
297d382aafbSBarry Smith       PetscPolymorphicScalar - allows defining a C++ polymorphic version of
298d382aafbSBarry Smith             a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument
299d382aafbSBarry Smith 
300d382aafbSBarry Smith    Synopsis:
301d382aafbSBarry Smith    PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function))
302d382aafbSBarry Smith 
303eca87e8dSBarry Smith    Not collective
304eca87e8dSBarry Smith 
305d382aafbSBarry Smith    Level: developer
306d382aafbSBarry Smith 
307d382aafbSBarry Smith     Example:
308d382aafbSBarry Smith       PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine
309d382aafbSBarry Smith            PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);}
310d382aafbSBarry Smith 
311d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine()
312d382aafbSBarry Smith 
313d382aafbSBarry Smith M*/
314d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;}
315d382aafbSBarry Smith 
316d382aafbSBarry Smith /*MC
317d382aafbSBarry Smith       PetscPolymorphicFunction - allows defining a C++ polymorphic version of
318d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
319d382aafbSBarry Smith             and returns the computed value (istead of an error code)
320d382aafbSBarry Smith 
321d382aafbSBarry Smith    Synopsis:
322d382aafbSBarry Smith    PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name)
323d382aafbSBarry Smith 
324eca87e8dSBarry Smith      Not collective
325eca87e8dSBarry Smith 
326d382aafbSBarry Smith    Level: developer
327d382aafbSBarry Smith 
328d382aafbSBarry Smith     Example:
329d382aafbSBarry Smith       PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine
330d382aafbSBarry Smith          PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;}
331d382aafbSBarry Smith 
332d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine()
333d382aafbSBarry Smith 
334d382aafbSBarry Smith M*/
335d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;}
336d382aafbSBarry Smith 
337d382aafbSBarry Smith #else
338d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C)
339d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C)
340d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E)
341d382aafbSBarry Smith #endif
342d382aafbSBarry Smith 
343d382aafbSBarry Smith /*MC
344d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
345d382aafbSBarry Smith 
346d382aafbSBarry Smith     Synopsis:
347ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
348d382aafbSBarry Smith 
349eca87e8dSBarry Smith     Not Collective
350eca87e8dSBarry Smith 
351d382aafbSBarry Smith     Input Parameters:
352d382aafbSBarry Smith .   cond - condition or expression
353d382aafbSBarry Smith 
354d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
355d382aafbSBarry Smith     branch is unlikely.
356d382aafbSBarry Smith 
357d382aafbSBarry Smith     Level: advanced
358d382aafbSBarry Smith 
359d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
360d382aafbSBarry Smith M*/
361d382aafbSBarry Smith 
362d382aafbSBarry Smith /*MC
363d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
364d382aafbSBarry Smith 
365d382aafbSBarry Smith     Synopsis:
366ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
367d382aafbSBarry Smith 
368eca87e8dSBarry Smith     Not Collective
369eca87e8dSBarry Smith 
370d382aafbSBarry Smith     Input Parameters:
371d382aafbSBarry Smith .   cond - condition or expression
372d382aafbSBarry Smith 
373d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
374d382aafbSBarry Smith     branch is likely.
375d382aafbSBarry Smith 
376d382aafbSBarry Smith     Level: advanced
377d382aafbSBarry Smith 
378d382aafbSBarry Smith .seealso: PetscUnlikely()
379d382aafbSBarry Smith M*/
380d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
381d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
382d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
383d382aafbSBarry Smith #else
384cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
385cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
386d382aafbSBarry Smith #endif
387d382aafbSBarry Smith 
388d382aafbSBarry Smith /*
389d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
390d382aafbSBarry Smith */
391d382aafbSBarry Smith #include "petscmath.h"
392d382aafbSBarry Smith 
393d382aafbSBarry Smith /*
394d382aafbSBarry Smith     Declare extern C stuff after including external header files
395d382aafbSBarry Smith */
396d382aafbSBarry Smith 
397d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
398d382aafbSBarry Smith 
399d382aafbSBarry Smith /*
400d382aafbSBarry Smith        Basic PETSc constants
401d382aafbSBarry Smith */
402d382aafbSBarry Smith 
403d382aafbSBarry Smith /*E
404ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
405d382aafbSBarry Smith 
406d382aafbSBarry Smith    Level: beginner
407d382aafbSBarry Smith 
408ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
40934e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
41034e82e7dSBarry Smith 
411d382aafbSBarry Smith E*/
412ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
413ace3abfcSBarry Smith extern const char *PetscBools[];
41470b3c8c7SBarry Smith 
41570b3c8c7SBarry Smith /*E
41670b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
41770b3c8c7SBarry Smith 
41870b3c8c7SBarry Smith    Level: beginner
41970b3c8c7SBarry Smith 
42070b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
42170b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
42270b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
42370b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
42470b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
42570b3c8c7SBarry Smith 
42670b3c8c7SBarry Smith E*/
42770b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
42870b3c8c7SBarry Smith extern const char *PetscCopyModes[];
429d382aafbSBarry Smith 
430d382aafbSBarry Smith /*MC
431ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
432d382aafbSBarry Smith 
433d382aafbSBarry Smith     Level: beginner
434d382aafbSBarry Smith 
435d382aafbSBarry Smith     Note: Zero integer
436d382aafbSBarry Smith 
437ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
438d382aafbSBarry Smith M*/
439d382aafbSBarry Smith 
440d382aafbSBarry Smith /*MC
441ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
442d382aafbSBarry Smith 
443d382aafbSBarry Smith     Level: beginner
444d382aafbSBarry Smith 
445d382aafbSBarry Smith     Note: Nonzero integer
446d382aafbSBarry Smith 
447ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
448d382aafbSBarry Smith M*/
449d382aafbSBarry Smith 
450d382aafbSBarry Smith /*MC
451d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
452d382aafbSBarry Smith 
453d382aafbSBarry Smith    Level: beginner
454d382aafbSBarry Smith 
455d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
456d382aafbSBarry Smith           some default
457d382aafbSBarry Smith 
458d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
459503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
460d382aafbSBarry Smith 
46134e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
46234e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
46334e82e7dSBarry Smith 
464d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
465d382aafbSBarry Smith 
466d382aafbSBarry Smith M*/
467d382aafbSBarry Smith #define PETSC_NULL           0
468d382aafbSBarry Smith 
469d382aafbSBarry Smith /*MC
470d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
471d382aafbSBarry Smith 
472d382aafbSBarry Smith    Level: beginner
473d382aafbSBarry Smith 
474d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
475d382aafbSBarry Smith           some default
476d382aafbSBarry Smith 
477d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
478d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
479d382aafbSBarry Smith 
480d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
481d382aafbSBarry Smith 
482d382aafbSBarry Smith M*/
483d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
484d382aafbSBarry Smith 
485d382aafbSBarry Smith /*MC
486557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
487557d4da8SBarry Smith        where you wish PETSc to use the default.
488557d4da8SBarry Smith 
489557d4da8SBarry Smith    Level: beginner
490557d4da8SBarry Smith 
491557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
492557d4da8SBarry Smith 
493557d4da8SBarry Smith M*/
494557d4da8SBarry Smith #define PETSC_DECIDE  -1
495557d4da8SBarry Smith 
496557d4da8SBarry Smith /*MC
497d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
498d382aafbSBarry Smith        where you wish PETSc to compute the required value.
499d382aafbSBarry Smith 
500d382aafbSBarry Smith    Level: beginner
501d382aafbSBarry Smith 
502557d4da8SBarry Smith 
503557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
504557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
505557d4da8SBarry Smith 
506d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
507d382aafbSBarry Smith 
508d382aafbSBarry Smith M*/
509d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
510d382aafbSBarry Smith 
511d382aafbSBarry Smith /*MC
512557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
513557d4da8SBarry Smith        where you wish PETSc to use the default.
514557d4da8SBarry Smith 
515557d4da8SBarry Smith    Level: beginner
516557d4da8SBarry Smith 
517557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
518557d4da8SBarry Smith 
519557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
520557d4da8SBarry Smith 
521557d4da8SBarry Smith M*/
522557d4da8SBarry Smith #define PETSC_DEFAULT  -2
523557d4da8SBarry Smith 
524557d4da8SBarry Smith /*MC
525d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
526d382aafbSBarry Smith            all the processs that PETSc knows about.
527d382aafbSBarry Smith 
528d382aafbSBarry Smith    Level: beginner
529d382aafbSBarry Smith 
530d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
531d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
532d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
533d382aafbSBarry Smith           PetscInitialize()
534d382aafbSBarry Smith 
535d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
536d382aafbSBarry Smith 
537d382aafbSBarry Smith M*/
538d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
539d382aafbSBarry Smith 
540d382aafbSBarry Smith /*MC
541503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
542d382aafbSBarry Smith 
543d382aafbSBarry Smith    Level: beginner
544d382aafbSBarry Smith 
545d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
546d382aafbSBarry Smith 
547d382aafbSBarry Smith M*/
548d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
549d382aafbSBarry Smith 
5507087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
5517087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
552d382aafbSBarry Smith 
5537087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
5547087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
5557087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
556d382aafbSBarry Smith 
557d382aafbSBarry Smith /*MC
558d382aafbSBarry Smith    PetscMalloc - Allocates memory
559d382aafbSBarry Smith 
560eca87e8dSBarry Smith    Synopsis:
561eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
562eca87e8dSBarry Smith 
563eca87e8dSBarry Smith    Not Collective
564eca87e8dSBarry Smith 
565d382aafbSBarry Smith    Input Parameter:
566d382aafbSBarry Smith .  m - number of bytes to allocate
567d382aafbSBarry Smith 
568d382aafbSBarry Smith    Output Parameter:
569d382aafbSBarry Smith .  result - memory allocated
570d382aafbSBarry Smith 
571d382aafbSBarry Smith    Level: beginner
572d382aafbSBarry Smith 
573d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
574d382aafbSBarry Smith 
575d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
576d382aafbSBarry Smith           properly handle not freeing the null pointer.
577d382aafbSBarry Smith 
578d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
579d382aafbSBarry Smith 
580d382aafbSBarry Smith   Concepts: memory allocation
581d382aafbSBarry Smith 
582d382aafbSBarry Smith M*/
5832714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
584d382aafbSBarry Smith 
585d382aafbSBarry Smith /*MC
586503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
587d382aafbSBarry Smith 
588d382aafbSBarry Smith    Synopsis:
589d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
590d382aafbSBarry Smith 
591eca87e8dSBarry Smith    Not Collective
592eca87e8dSBarry Smith 
593eca87e8dSBarry Smith    Input Parameters:
594eca87e8dSBarry Smith .  addr - address to align (any pointer type)
595eca87e8dSBarry Smith 
596d382aafbSBarry Smith    Level: developer
597d382aafbSBarry Smith 
598d382aafbSBarry Smith .seealso: PetscMallocAlign()
599d382aafbSBarry Smith 
600d382aafbSBarry Smith   Concepts: memory allocation
601d382aafbSBarry Smith M*/
602d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
603d382aafbSBarry Smith 
604d382aafbSBarry Smith /*MC
605503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
606d382aafbSBarry Smith 
607eca87e8dSBarry Smith    Synopsis:
608eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
609eca87e8dSBarry Smith 
610eca87e8dSBarry Smith    Not Collective
611eca87e8dSBarry Smith 
612d382aafbSBarry Smith    Input Parameter:
613d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
614d382aafbSBarry Smith .  t1 - type of first memory elements
615d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
616d382aafbSBarry Smith -  t2 - type of second memory elements
617d382aafbSBarry Smith 
618d382aafbSBarry Smith    Output Parameter:
619d382aafbSBarry Smith +  r1 - memory allocated in first chunk
620d382aafbSBarry Smith -  r2 - memory allocated in second chunk
621d382aafbSBarry Smith 
622d382aafbSBarry Smith    Level: developer
623d382aafbSBarry Smith 
624d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
625d382aafbSBarry Smith 
626d382aafbSBarry Smith   Concepts: memory allocation
627d382aafbSBarry Smith 
628d382aafbSBarry Smith M*/
629d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
630d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
631d382aafbSBarry Smith #else
6323b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \
633d382aafbSBarry Smith                                          || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
634d382aafbSBarry Smith #endif
635d382aafbSBarry Smith 
636d382aafbSBarry Smith /*MC
637503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
638d382aafbSBarry Smith 
639eca87e8dSBarry Smith    Synopsis:
640eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
641eca87e8dSBarry Smith 
642eca87e8dSBarry Smith    Not Collective
643eca87e8dSBarry Smith 
644d382aafbSBarry Smith    Input Parameter:
645d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
646d382aafbSBarry Smith .  t1 - type of first memory elements
647d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
648d382aafbSBarry Smith .  t2 - type of second memory elements
649d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
650d382aafbSBarry Smith -  t3 - type of third memory elements
651d382aafbSBarry Smith 
652d382aafbSBarry Smith    Output Parameter:
653d382aafbSBarry Smith +  r1 - memory allocated in first chunk
654d382aafbSBarry Smith .  r2 - memory allocated in second chunk
655d382aafbSBarry Smith -  r3 - memory allocated in third chunk
656d382aafbSBarry Smith 
657d382aafbSBarry Smith    Level: developer
658d382aafbSBarry Smith 
659d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
660d382aafbSBarry Smith 
661d382aafbSBarry Smith   Concepts: memory allocation
662d382aafbSBarry Smith 
663d382aafbSBarry Smith M*/
664d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
665d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
666d382aafbSBarry Smith #else
6673b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
668d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
669d382aafbSBarry Smith #endif
670d382aafbSBarry Smith 
671d382aafbSBarry Smith /*MC
672503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
673d382aafbSBarry Smith 
674eca87e8dSBarry Smith    Synopsis:
675eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
676eca87e8dSBarry Smith 
677eca87e8dSBarry Smith    Not Collective
678eca87e8dSBarry Smith 
679d382aafbSBarry Smith    Input Parameter:
680d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
681d382aafbSBarry Smith .  t1 - type of first memory elements
682d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
683d382aafbSBarry Smith .  t2 - type of second memory elements
684d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
685d382aafbSBarry Smith .  t3 - type of third memory elements
686d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
687d382aafbSBarry Smith -  t4 - type of fourth memory elements
688d382aafbSBarry Smith 
689d382aafbSBarry Smith    Output Parameter:
690d382aafbSBarry Smith +  r1 - memory allocated in first chunk
691d382aafbSBarry Smith .  r2 - memory allocated in second chunk
692d382aafbSBarry Smith .  r3 - memory allocated in third chunk
693d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
694d382aafbSBarry Smith 
695d382aafbSBarry Smith    Level: developer
696d382aafbSBarry Smith 
697d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
698d382aafbSBarry Smith 
699d382aafbSBarry Smith   Concepts: memory allocation
700d382aafbSBarry Smith 
701d382aafbSBarry Smith M*/
702d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
703d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
704d382aafbSBarry Smith #else
705d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
7063b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
707d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
708d382aafbSBarry Smith #endif
709d382aafbSBarry Smith 
710d382aafbSBarry Smith /*MC
711503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
712d382aafbSBarry Smith 
713eca87e8dSBarry Smith    Synopsis:
714eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
715eca87e8dSBarry Smith 
716eca87e8dSBarry Smith    Not Collective
717eca87e8dSBarry Smith 
718d382aafbSBarry Smith    Input Parameter:
719d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
720d382aafbSBarry Smith .  t1 - type of first memory elements
721d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
722d382aafbSBarry Smith .  t2 - type of second memory elements
723d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
724d382aafbSBarry Smith .  t3 - type of third memory elements
725d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
726d382aafbSBarry Smith .  t4 - type of fourth memory elements
727d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
728d382aafbSBarry Smith -  t5 - type of fifth memory elements
729d382aafbSBarry Smith 
730d382aafbSBarry Smith    Output Parameter:
731d382aafbSBarry Smith +  r1 - memory allocated in first chunk
732d382aafbSBarry Smith .  r2 - memory allocated in second chunk
733d382aafbSBarry Smith .  r3 - memory allocated in third chunk
734d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
735d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
736d382aafbSBarry Smith 
737d382aafbSBarry Smith    Level: developer
738d382aafbSBarry Smith 
739d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
740d382aafbSBarry Smith 
741d382aafbSBarry Smith   Concepts: memory allocation
742d382aafbSBarry Smith 
743d382aafbSBarry Smith M*/
744d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
745d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
746d382aafbSBarry Smith #else
747d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
7483b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
749d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
750d382aafbSBarry Smith #endif
751d382aafbSBarry Smith 
752d382aafbSBarry Smith 
753d382aafbSBarry Smith /*MC
754503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
755d382aafbSBarry Smith 
756eca87e8dSBarry Smith    Synopsis:
757eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
758eca87e8dSBarry Smith 
759eca87e8dSBarry Smith    Not Collective
760eca87e8dSBarry Smith 
761d382aafbSBarry Smith    Input Parameter:
762d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
763d382aafbSBarry Smith .  t1 - type of first memory elements
764d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
765d382aafbSBarry Smith .  t2 - type of second memory elements
766d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
767d382aafbSBarry Smith .  t3 - type of third memory elements
768d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
769d382aafbSBarry Smith .  t4 - type of fourth memory elements
770d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
771d382aafbSBarry Smith .  t5 - type of fifth memory elements
772d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
773d382aafbSBarry Smith -  t6 - type of sixth memory elements
774d382aafbSBarry Smith 
775d382aafbSBarry Smith    Output Parameter:
776d382aafbSBarry Smith +  r1 - memory allocated in first chunk
777d382aafbSBarry Smith .  r2 - memory allocated in second chunk
778d382aafbSBarry Smith .  r3 - memory allocated in third chunk
779d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
780d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
781d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
782d382aafbSBarry Smith 
783d382aafbSBarry Smith    Level: developer
784d382aafbSBarry Smith 
785d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
786d382aafbSBarry Smith 
787d382aafbSBarry Smith   Concepts: memory allocation
788d382aafbSBarry Smith 
789d382aafbSBarry Smith M*/
790d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
791d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
792d382aafbSBarry Smith #else
793d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7943b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
795d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
796d382aafbSBarry Smith #endif
797d382aafbSBarry Smith 
798d382aafbSBarry Smith /*MC
799503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
800d382aafbSBarry Smith 
801eca87e8dSBarry Smith    Synopsis:
802eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
803eca87e8dSBarry Smith 
804eca87e8dSBarry Smith    Not Collective
805eca87e8dSBarry Smith 
806d382aafbSBarry Smith    Input Parameter:
807d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
808d382aafbSBarry Smith .  t1 - type of first memory elements
809d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
810d382aafbSBarry Smith .  t2 - type of second memory elements
811d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
812d382aafbSBarry Smith .  t3 - type of third memory elements
813d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
814d382aafbSBarry Smith .  t4 - type of fourth memory elements
815d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
816d382aafbSBarry Smith .  t5 - type of fifth memory elements
817d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
818d382aafbSBarry Smith .  t6 - type of sixth memory elements
819d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
820d382aafbSBarry Smith -  t7 - type of sixth memory elements
821d382aafbSBarry Smith 
822d382aafbSBarry Smith    Output Parameter:
823d382aafbSBarry Smith +  r1 - memory allocated in first chunk
824d382aafbSBarry Smith .  r2 - memory allocated in second chunk
825d382aafbSBarry Smith .  r3 - memory allocated in third chunk
826d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
827d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
828d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
829eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
830d382aafbSBarry Smith 
831d382aafbSBarry Smith    Level: developer
832d382aafbSBarry Smith 
833d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
834d382aafbSBarry Smith 
835d382aafbSBarry Smith   Concepts: memory allocation
836d382aafbSBarry Smith 
837d382aafbSBarry Smith M*/
838d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
839d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
840d382aafbSBarry Smith #else
841d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
8423b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
843d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
844d382aafbSBarry Smith #endif
845d382aafbSBarry Smith 
846d382aafbSBarry Smith /*MC
847503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
848d382aafbSBarry Smith 
849eca87e8dSBarry Smith    Synopsis:
850eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
851eca87e8dSBarry Smith 
852eca87e8dSBarry Smith    Not Collective
853eca87e8dSBarry Smith 
854d382aafbSBarry Smith    Input Parameter:
855d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
856d382aafbSBarry Smith 
857d382aafbSBarry Smith    Output Parameter:
858d382aafbSBarry Smith .  result - memory allocated
859d382aafbSBarry Smith 
860d382aafbSBarry Smith    Level: beginner
861d382aafbSBarry Smith 
862ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
863d382aafbSBarry Smith 
864d382aafbSBarry Smith   Concepts: memory allocation
865d382aafbSBarry Smith 
866d382aafbSBarry Smith M*/
867d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
868ad0619ddSBarry Smith 
869ad0619ddSBarry Smith /*MC
870ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
871ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
872ad0619ddSBarry Smith 
873ad0619ddSBarry Smith    Synopsis:
874ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
875ad0619ddSBarry Smith 
876ad0619ddSBarry Smith    Not Collective
877ad0619ddSBarry Smith 
878ad0619ddSBarry Smith    Input Parameter:
879ad0619ddSBarry Smith +  obj - object memory is logged to
880ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
881ad0619ddSBarry Smith 
882ad0619ddSBarry Smith    Output Parameter:
883ad0619ddSBarry Smith .  result - memory allocated
884ad0619ddSBarry Smith 
885ad0619ddSBarry Smith    Level: developer
886ad0619ddSBarry Smith 
887ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
888ad0619ddSBarry Smith 
889ad0619ddSBarry Smith   Concepts: memory allocation
890ad0619ddSBarry Smith 
891ad0619ddSBarry Smith M*/
892d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
893d382aafbSBarry Smith 
894d382aafbSBarry Smith /*MC
895d382aafbSBarry Smith    PetscFree - Frees memory
896d382aafbSBarry Smith 
897eca87e8dSBarry Smith    Synopsis:
898eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
899eca87e8dSBarry Smith 
900eca87e8dSBarry Smith    Not Collective
901eca87e8dSBarry Smith 
902d382aafbSBarry Smith    Input Parameter:
903d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
904d382aafbSBarry Smith 
905d382aafbSBarry Smith    Level: beginner
906d382aafbSBarry Smith 
907d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
908d382aafbSBarry Smith 
909d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
910d382aafbSBarry Smith 
911d382aafbSBarry Smith   Concepts: memory allocation
912d382aafbSBarry Smith 
913d382aafbSBarry Smith M*/
91412537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
915d382aafbSBarry Smith 
916d382aafbSBarry Smith /*MC
917d382aafbSBarry Smith    PetscFreeVoid - Frees memory
918d382aafbSBarry Smith 
919d382aafbSBarry Smith    Synopsis:
920d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
921d382aafbSBarry Smith 
922eca87e8dSBarry Smith    Not Collective
923eca87e8dSBarry Smith 
924eca87e8dSBarry Smith    Input Parameter:
925eca87e8dSBarry Smith .   memory - memory to free
926eca87e8dSBarry Smith 
927d382aafbSBarry Smith    Level: beginner
928d382aafbSBarry Smith 
929d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
930d382aafbSBarry Smith 
931d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
932d382aafbSBarry Smith 
933d382aafbSBarry Smith   Concepts: memory allocation
934d382aafbSBarry Smith 
935d382aafbSBarry Smith M*/
9362714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
937d382aafbSBarry Smith 
938d382aafbSBarry Smith 
939d382aafbSBarry Smith /*MC
940d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
941d382aafbSBarry Smith 
942eca87e8dSBarry Smith    Synopsis:
943eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
944eca87e8dSBarry Smith 
945eca87e8dSBarry Smith    Not Collective
946eca87e8dSBarry Smith 
947d382aafbSBarry Smith    Input Parameter:
948d382aafbSBarry Smith +   memory1 - memory to free
949d382aafbSBarry Smith -   memory2 - 2nd memory to free
950d382aafbSBarry Smith 
951d382aafbSBarry Smith    Level: developer
952d382aafbSBarry Smith 
953d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
954d382aafbSBarry Smith 
955d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
956d382aafbSBarry Smith 
957d382aafbSBarry Smith   Concepts: memory allocation
958d382aafbSBarry Smith 
959d382aafbSBarry Smith M*/
960d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
961d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
962d382aafbSBarry Smith #else
96381dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
964d382aafbSBarry Smith #endif
965d382aafbSBarry Smith 
966d382aafbSBarry Smith /*MC
967d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
968d382aafbSBarry Smith 
969eca87e8dSBarry Smith    Synopsis:
970eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
971eca87e8dSBarry Smith 
972eca87e8dSBarry Smith    Not Collective
973eca87e8dSBarry Smith 
974d382aafbSBarry Smith    Input Parameter:
975d382aafbSBarry Smith +   memory1 - memory to free
976d382aafbSBarry Smith .   memory2 - 2nd memory to free
977d382aafbSBarry Smith -   memory3 - 3rd memory to free
978d382aafbSBarry Smith 
979d382aafbSBarry Smith    Level: developer
980d382aafbSBarry Smith 
981d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
982d382aafbSBarry Smith 
983d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
984d382aafbSBarry Smith 
985d382aafbSBarry Smith   Concepts: memory allocation
986d382aafbSBarry Smith 
987d382aafbSBarry Smith M*/
988d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
989d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
990d382aafbSBarry Smith #else
99181dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
992d382aafbSBarry Smith #endif
993d382aafbSBarry Smith 
994d382aafbSBarry Smith /*MC
995d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
996d382aafbSBarry Smith 
997eca87e8dSBarry Smith    Synopsis:
998eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
999eca87e8dSBarry Smith 
1000eca87e8dSBarry Smith    Not Collective
1001eca87e8dSBarry Smith 
1002d382aafbSBarry Smith    Input Parameter:
1003d382aafbSBarry Smith +   m1 - memory to free
1004d382aafbSBarry Smith .   m2 - 2nd memory to free
1005d382aafbSBarry Smith .   m3 - 3rd memory to free
1006d382aafbSBarry Smith -   m4 - 4th memory to free
1007d382aafbSBarry Smith 
1008d382aafbSBarry Smith    Level: developer
1009d382aafbSBarry Smith 
1010d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
1011d382aafbSBarry Smith 
1012d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
1013d382aafbSBarry Smith 
1014d382aafbSBarry Smith   Concepts: memory allocation
1015d382aafbSBarry Smith 
1016d382aafbSBarry Smith M*/
1017d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1018d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1019d382aafbSBarry Smith #else
102081dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1021d382aafbSBarry Smith #endif
1022d382aafbSBarry Smith 
1023d382aafbSBarry Smith /*MC
1024d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1025d382aafbSBarry Smith 
1026eca87e8dSBarry Smith    Synopsis:
1027eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1028eca87e8dSBarry Smith 
1029eca87e8dSBarry Smith    Not Collective
1030eca87e8dSBarry Smith 
1031d382aafbSBarry Smith    Input Parameter:
1032d382aafbSBarry Smith +   m1 - memory to free
1033d382aafbSBarry Smith .   m2 - 2nd memory to free
1034d382aafbSBarry Smith .   m3 - 3rd memory to free
1035d382aafbSBarry Smith .   m4 - 4th memory to free
1036d382aafbSBarry Smith -   m5 - 5th memory to free
1037d382aafbSBarry Smith 
1038d382aafbSBarry Smith    Level: developer
1039d382aafbSBarry Smith 
1040d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
1041d382aafbSBarry Smith 
1042d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1043d382aafbSBarry Smith 
1044d382aafbSBarry Smith   Concepts: memory allocation
1045d382aafbSBarry Smith 
1046d382aafbSBarry Smith M*/
1047d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1048d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1049d382aafbSBarry Smith #else
105081dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1051d382aafbSBarry Smith #endif
1052d382aafbSBarry Smith 
1053d382aafbSBarry Smith 
1054d382aafbSBarry Smith /*MC
1055d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1056d382aafbSBarry Smith 
1057eca87e8dSBarry Smith    Synopsis:
1058eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1059eca87e8dSBarry Smith 
1060eca87e8dSBarry Smith    Not Collective
1061eca87e8dSBarry Smith 
1062d382aafbSBarry Smith    Input Parameter:
1063d382aafbSBarry Smith +   m1 - memory to free
1064d382aafbSBarry Smith .   m2 - 2nd memory to free
1065d382aafbSBarry Smith .   m3 - 3rd memory to free
1066d382aafbSBarry Smith .   m4 - 4th memory to free
1067d382aafbSBarry Smith .   m5 - 5th memory to free
1068d382aafbSBarry Smith -   m6 - 6th memory to free
1069d382aafbSBarry Smith 
1070d382aafbSBarry Smith 
1071d382aafbSBarry Smith    Level: developer
1072d382aafbSBarry Smith 
1073d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1074d382aafbSBarry Smith 
1075d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1076d382aafbSBarry Smith 
1077d382aafbSBarry Smith   Concepts: memory allocation
1078d382aafbSBarry Smith 
1079d382aafbSBarry Smith M*/
1080d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1081d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1082d382aafbSBarry Smith #else
108381dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1084d382aafbSBarry Smith #endif
1085d382aafbSBarry Smith 
1086d382aafbSBarry Smith /*MC
1087d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1088d382aafbSBarry Smith 
1089eca87e8dSBarry Smith    Synopsis:
1090eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1091eca87e8dSBarry Smith 
1092eca87e8dSBarry Smith    Not Collective
1093eca87e8dSBarry Smith 
1094d382aafbSBarry Smith    Input Parameter:
1095d382aafbSBarry Smith +   m1 - memory to free
1096d382aafbSBarry Smith .   m2 - 2nd memory to free
1097d382aafbSBarry Smith .   m3 - 3rd memory to free
1098d382aafbSBarry Smith .   m4 - 4th memory to free
1099d382aafbSBarry Smith .   m5 - 5th memory to free
1100d382aafbSBarry Smith .   m6 - 6th memory to free
1101d382aafbSBarry Smith -   m7 - 7th memory to free
1102d382aafbSBarry Smith 
1103d382aafbSBarry Smith 
1104d382aafbSBarry Smith    Level: developer
1105d382aafbSBarry Smith 
1106d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1107d382aafbSBarry Smith 
1108d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1109d382aafbSBarry Smith           PetscMalloc7()
1110d382aafbSBarry Smith 
1111d382aafbSBarry Smith   Concepts: memory allocation
1112d382aafbSBarry Smith 
1113d382aafbSBarry Smith M*/
1114d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1115d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1116d382aafbSBarry Smith #else
111781dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1118d382aafbSBarry Smith #endif
1119d382aafbSBarry Smith 
11207087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
11217087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
11227087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
11237087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1124d382aafbSBarry Smith 
1125d382aafbSBarry Smith /*
112666d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1127d382aafbSBarry Smith */
11287087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
11297087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
11307087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
11317087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
11327087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
11337087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
11347087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
1135d382aafbSBarry Smith 
1136d382aafbSBarry Smith 
1137d382aafbSBarry Smith /*E
1138d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1139d382aafbSBarry Smith 
1140d382aafbSBarry Smith    Level: beginner
1141d382aafbSBarry Smith 
1142d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1143d382aafbSBarry Smith 
1144d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1145d382aafbSBarry Smith           PetscDataTypeGetSize()
1146d382aafbSBarry Smith 
1147d382aafbSBarry Smith E*/
1148d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
1149557d4da8SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC_LONG_DOUBLE = 10} PetscDataType;
1150d382aafbSBarry Smith extern const char *PetscDataTypes[];
1151d382aafbSBarry Smith 
1152d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1153d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1154d382aafbSBarry Smith #else
1155ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1156d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
1157d382aafbSBarry Smith #else
1158d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1159d382aafbSBarry Smith #endif
1160d382aafbSBarry Smith #endif
1161ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1162d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
1163d382aafbSBarry Smith #else
1164d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1165d382aafbSBarry Smith #endif
1166d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1167d382aafbSBarry Smith 
11687087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11697087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11707087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1171d382aafbSBarry Smith 
1172d382aafbSBarry Smith /*
1173d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1174d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1175d382aafbSBarry Smith    functionality and/or error checking.
1176d382aafbSBarry Smith */
11777087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11787087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11797087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11807087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11817087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11827087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11837087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11847087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11857087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11867087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11877087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11887087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11897087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
11907087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
11917087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
11927087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
11937087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
11947087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
11957087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
119674722a09SBarry Smith extern PetscErrorCode    PetscStrendswith(const char[],const char[],PetscBool*);
11977ba3a57cSBarry Smith extern PetscErrorCode    PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
11987087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
11997087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1200d382aafbSBarry Smith 
1201d382aafbSBarry Smith /*S
1202d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1203d382aafbSBarry Smith 
1204d382aafbSBarry Smith   Level: intermediate
1205d382aafbSBarry Smith 
1206d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1207d382aafbSBarry Smith S*/
1208d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1209d382aafbSBarry Smith 
12107087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
12117087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
12128c74ee41SBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken*);
1213d382aafbSBarry Smith 
1214d382aafbSBarry Smith /*
1215d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1216d382aafbSBarry Smith */
12177087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
1218ce63c4c1SBarry Smith #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
12197087cfbeSBarry Smith extern  MPI_Op MPIU_SUM;
1220d382aafbSBarry Smith #else
1221d382aafbSBarry Smith #define MPIU_SUM MPI_SUM
1222d382aafbSBarry Smith #endif
1223ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128)
1224d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1225d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1226d9822059SBarry Smith #else
1227d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1228d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1229d9822059SBarry Smith #endif
12307087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1231d382aafbSBarry Smith 
1232eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1233eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1234eb3f98d2SBarry Smith 
1235d382aafbSBarry Smith /*S
1236d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1237d382aafbSBarry Smith 
1238d382aafbSBarry Smith    Level: beginner
1239d382aafbSBarry Smith 
1240d382aafbSBarry Smith    Note: This is the base class from which all objects appear.
1241d382aafbSBarry Smith 
12421890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1243d382aafbSBarry Smith S*/
1244d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1245d382aafbSBarry Smith 
1246d382aafbSBarry Smith /*S
1247d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1248d382aafbSBarry Smith       by string name
1249d382aafbSBarry Smith 
1250d382aafbSBarry Smith    Level: advanced
1251d382aafbSBarry Smith 
1252d382aafbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy()
1253d382aafbSBarry Smith S*/
1254d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1255d382aafbSBarry Smith 
1256d382aafbSBarry Smith /*E
1257d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1258d382aafbSBarry Smith 
1259d382aafbSBarry Smith   Level: beginner
1260d382aafbSBarry Smith 
1261d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1262d382aafbSBarry Smith 
1263d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1264d382aafbSBarry Smith 
1265d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1266d382aafbSBarry Smith 
1267d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1268d382aafbSBarry Smith 
1269d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1270d382aafbSBarry Smith 
1271d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1272d382aafbSBarry Smith E*/
1273d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1274d382aafbSBarry Smith 
1275d382aafbSBarry Smith #include "petscviewer.h"
1276d382aafbSBarry Smith #include "petscoptions.h"
1277d382aafbSBarry Smith 
12780700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12797087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
12807087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
12817087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1282d382aafbSBarry Smith 
1283d382aafbSBarry Smith /*
1284d382aafbSBarry Smith    Routines that get memory usage information from the OS
1285d382aafbSBarry Smith */
12867087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
12877087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
12887087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
12897087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1290d382aafbSBarry Smith 
12917087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
12927087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
12937087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
12947087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1295d382aafbSBarry Smith 
1296d382aafbSBarry Smith /*
1297d382aafbSBarry Smith    Initialization of PETSc
1298d382aafbSBarry Smith */
12997087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
1300d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL))
13017087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
13027087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool  *);
13037087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool  *);
13047087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
130509573ac7SBarry Smith extern PetscErrorCode  PetscInitializeFortran(void);
13067087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
13077087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
13087087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1309d382aafbSBarry Smith 
13107087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
13117087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1312d382aafbSBarry Smith 
1313d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
131485afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
131585afcc9aSBarry Smith extern PetscErrorCode  PetscHMPISpawn(PetscMPIInt);
131685afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFinalize(void);
131785afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
131885afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
131985afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFree(MPI_Comm,void*);
132085afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMalloc(MPI_Comm,size_t,void**);
1321d382aafbSBarry Smith 
13227087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
13237087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
13247087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
13255180491cSLisandro Dalcin extern PetscErrorCode  PetscPythonMonitorSet(PetscObject,const char[]);
1326d382aafbSBarry Smith 
1327d382aafbSBarry Smith /*
1328d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
1329d382aafbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be
1330d382aafbSBarry Smith    C++.
1331d382aafbSBarry Smith */
1332d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1333d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1334d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1335d382aafbSBarry Smith 
1336d382aafbSBarry Smith /*
1337d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1338d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1339503cfb0cSBarry Smith 
1340503cfb0cSBarry Smith    Level: developer
1341503cfb0cSBarry Smith 
1342503cfb0cSBarry Smith .seealso: PetscUseMethod()
1343d382aafbSBarry Smith */
1344d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1345d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1346d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1347d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1348d382aafbSBarry Smith   }
1349503cfb0cSBarry Smith 
1350503cfb0cSBarry Smith /*
1351503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1352503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1353503cfb0cSBarry Smith 
1354503cfb0cSBarry Smith    Level: developer
1355503cfb0cSBarry Smith 
1356503cfb0cSBarry Smith .seealso: PetscTryMethod()
1357503cfb0cSBarry Smith */
1358d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1359d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1360d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1361d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1362703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1363d382aafbSBarry Smith   }
1364503cfb0cSBarry Smith 
1365d382aafbSBarry Smith /*
1366d382aafbSBarry Smith     Functions that can act on any PETSc object.
1367d382aafbSBarry Smith */
1368fcfd50ebSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject*);
13697087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13707087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
1371609db0e0SLisandro Dalcin extern PetscErrorCode  PetscObjectGetClassName(PetscObject,const char *[]);
13727087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13737087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13747087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13757087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13767087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13777087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13787087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13797087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
13807087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
13817087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
13827087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
13837087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
13847087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
13857087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
13867087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
13876ba4bc90SBarry Smith extern PetscErrorCode  PetscObjectRemoveReference(PetscObject,const char[]);
13887087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
13897087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
13907087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
13917087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
13927087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
13937087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
13947087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
13957087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
1396d382aafbSBarry Smith 
1397d382aafbSBarry Smith /*MC
1398d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1399d382aafbSBarry Smith 
1400eca87e8dSBarry Smith     Synopsis:
1401eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1402eca87e8dSBarry Smith 
1403ad4df100SBarry Smith    Logically Collective on PetscObject
1404d382aafbSBarry Smith 
1405d382aafbSBarry Smith    Input Parameters:
1406d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1407d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1408d382aafbSBarry Smith .  name - name associated with the child function
1409d382aafbSBarry Smith .  fname - name of the function
1410d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1411d382aafbSBarry Smith 
1412d382aafbSBarry Smith    Level: advanced
1413d382aafbSBarry Smith 
1414d382aafbSBarry Smith 
1415d382aafbSBarry Smith    Notes:
1416d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1417d382aafbSBarry Smith 
1418d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1419d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1420d382aafbSBarry Smith 
1421d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
142220de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1423d382aafbSBarry Smith    enabled.
1424d382aafbSBarry Smith 
1425d382aafbSBarry Smith    Concepts: objects^composing functions
1426d382aafbSBarry Smith    Concepts: composing functions
1427d382aafbSBarry Smith    Concepts: functions^querying
1428d382aafbSBarry Smith    Concepts: objects^querying
1429d382aafbSBarry Smith    Concepts: querying objects
1430d382aafbSBarry Smith 
1431d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1432d382aafbSBarry Smith M*/
1433d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1434d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1435d382aafbSBarry Smith #else
1436d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1437d382aafbSBarry Smith #endif
1438d382aafbSBarry Smith 
14397087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
14407087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
14417087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
14427087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
14437087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
14447087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
14457087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
14467087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
14477087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
14487087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
14497087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
14507087cfbeSBarry Smith extern PetscErrorCode  PetscTypeCompare(PetscObject,const char[],PetscBool *);
14512b12f010SJed Brown extern PetscErrorCode  PetscTypeCompareAny(PetscObject,PetscBool*,const char[],...);
14527087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
14537087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1454d382aafbSBarry Smith 
1455d382aafbSBarry Smith /*
1456d382aafbSBarry Smith     Defines PETSc error handling.
1457d382aafbSBarry Smith */
1458d382aafbSBarry Smith #include "petscerror.h"
1459d382aafbSBarry Smith 
1460d382aafbSBarry Smith /*S
1461503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1462d382aafbSBarry Smith 
14631d0fab5eSBarry Smith    Level: developer
1464d382aafbSBarry Smith 
14651d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14661d0fab5eSBarry Smith 
14671d0fab5eSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery()
1468d382aafbSBarry Smith S*/
1469d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1470d382aafbSBarry Smith 
1471fcfd50ebSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList*);
14727087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
1473bfec8eecSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
14747087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14756ba4bc90SBarry Smith extern PetscErrorCode  PetscOListRemoveReference(PetscOList *,const char[]);
14767087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1477d382aafbSBarry Smith 
1478d382aafbSBarry Smith /*
1479503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1480d382aafbSBarry Smith   link libraries that will be loaded as needed.
1481d382aafbSBarry Smith */
14827087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
14837087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
14844b91b6eaSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
14857087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1486d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1487d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1488d382aafbSBarry Smith #else
1489d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1490d382aafbSBarry Smith #endif
14917087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
14927087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
14937087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
14947087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1495d382aafbSBarry Smith 
1496d382aafbSBarry Smith /*S
1497d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1498d382aafbSBarry Smith 
1499d382aafbSBarry Smith    Level: advanced
1500d382aafbSBarry Smith 
150120de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1502d382aafbSBarry Smith 
1503d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1504d382aafbSBarry Smith S*/
1505d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
15067087cfbeSBarry Smith extern  PetscDLLibrary DLLibrariesLoaded;
15077087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
15087087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
15097087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
15107087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
15117087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
15127087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
15137087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
15147087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1515d382aafbSBarry Smith 
1516d382aafbSBarry Smith /*
151705846914SDmitry Karpeev   PetscFwk support.  Needs to be documented.
151805846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
151905846914SDmitry Karpeev */
152005846914SDmitry Karpeev #include "petscfwk.h"
152105846914SDmitry Karpeev 
152205846914SDmitry Karpeev /*
1523d382aafbSBarry Smith      Useful utility routines
1524d382aafbSBarry Smith */
15257087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
15267087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
15277087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1528d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1))
1529d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1))
15307087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1531d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1))
1532d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1))
15337087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
15347087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1535d382aafbSBarry Smith 
1536503cfb0cSBarry Smith /*
1537ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1538503cfb0cSBarry Smith 
1539503cfb0cSBarry Smith     Notes: This is useful in cases like
1540503cfb0cSBarry Smith $     int        *a;
1541ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1542ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1543503cfb0cSBarry Smith */
1544d382aafbSBarry Smith  #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1545503cfb0cSBarry Smith 
1546d382aafbSBarry Smith /*
1547d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1548d382aafbSBarry Smith */
1549d382aafbSBarry Smith #include "petscdraw.h"
1550d382aafbSBarry Smith 
1551d382aafbSBarry Smith /*
1552d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1553d382aafbSBarry Smith */
1554d382aafbSBarry Smith #include "private/petscimpl.h"
1555503cfb0cSBarry Smith 
1556238ccf28SShri Abhyankar 
1557d382aafbSBarry Smith /*MC
1558d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1559d382aafbSBarry Smith 
1560d382aafbSBarry Smith    Synopsis:
1561d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1562d382aafbSBarry Smith 
1563eca87e8dSBarry Smith     Not Collective
1564eca87e8dSBarry Smith 
1565d382aafbSBarry Smith     Input Parameters:
1566d382aafbSBarry Smith .   format - the usual printf() format string
1567d382aafbSBarry Smith 
1568d382aafbSBarry Smith    Options Database Keys:
1569d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1570d382aafbSBarry Smith          (default) stderr
1571d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1572d382aafbSBarry Smith           error is handled.)
1573d382aafbSBarry Smith 
1574d382aafbSBarry Smith    Notes: Use
1575d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1576d382aafbSBarry Smith $                        error is handled.) and
1577d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1578c9a19010SBarry Smith $        of you can use your own function
1579d382aafbSBarry Smith 
1580d382aafbSBarry Smith           Use
1581d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1582d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1583d382aafbSBarry Smith 
1584d382aafbSBarry Smith           Use
1585d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1586d382aafbSBarry Smith 
1587d382aafbSBarry Smith    Level: developer
1588d382aafbSBarry Smith 
1589d382aafbSBarry Smith     Fortran Note:
1590d382aafbSBarry Smith     This routine is not supported in Fortran.
1591d382aafbSBarry Smith 
1592d382aafbSBarry Smith     Concepts: error messages^printing
1593d382aafbSBarry Smith     Concepts: printing^error messages
1594d382aafbSBarry Smith 
1595c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1596d382aafbSBarry Smith M*/
15977087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1598d382aafbSBarry Smith 
1599d382aafbSBarry Smith /*MC
1600d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1601d382aafbSBarry Smith 
1602d382aafbSBarry Smith    Synopsis:
1603d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1604d382aafbSBarry Smith 
1605eca87e8dSBarry Smith     Not Collective
1606eca87e8dSBarry Smith 
1607d382aafbSBarry Smith     Input Parameters:
1608d382aafbSBarry Smith .   format - the usual printf() format string
1609d382aafbSBarry Smith 
1610d382aafbSBarry Smith    Level: developer
1611d382aafbSBarry Smith 
1612d382aafbSBarry Smith     Fortran Note:
1613d382aafbSBarry Smith     This routine is not supported in Fortran.
1614d382aafbSBarry Smith 
1615d382aafbSBarry Smith     Concepts: help messages^printing
1616d382aafbSBarry Smith     Concepts: printing^help messages
1617d382aafbSBarry Smith 
1618d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1619d382aafbSBarry Smith M*/
16207087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1621d382aafbSBarry Smith 
1622fcfd50ebSBarry Smith /*
1623fcfd50ebSBarry Smith      Defines PETSc profiling.
1624fcfd50ebSBarry Smith */
1625fcfd50ebSBarry Smith #include "petsclog.h"
1626fcfd50ebSBarry Smith 
1627fcfd50ebSBarry Smith /*
1628fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1629fcfd50ebSBarry Smith */
1630fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1631fcfd50ebSBarry Smith extern PetscBool  PetscAMSPublishAll;
1632fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1633fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1634fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1635fcfd50ebSBarry Smith #else
1636fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1637fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1638fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1639fcfd50ebSBarry Smith #endif
1640fcfd50ebSBarry Smith 
1641fcfd50ebSBarry Smith /*
1642fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1643fcfd50ebSBarry Smith */
1644fcfd50ebSBarry Smith extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1645fcfd50ebSBarry Smith extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1646fcfd50ebSBarry Smith extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1647fcfd50ebSBarry Smith extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1648fcfd50ebSBarry Smith extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1649fcfd50ebSBarry Smith extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1650257d2499SJed Brown extern PetscErrorCode   PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1651fcfd50ebSBarry Smith 
1652fcfd50ebSBarry Smith 
1653fcfd50ebSBarry Smith 
1654fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1655fcfd50ebSBarry Smith #include <stdarg.h>
1656fcfd50ebSBarry Smith extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1657fcfd50ebSBarry Smith extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1658fcfd50ebSBarry Smith extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
16598c74ee41SBarry Smith extern PetscErrorCode   PetscVFPrintfRegress(FILE*,const char *,va_list);
16608c74ee41SBarry Smith extern PetscErrorCode   PetscVFPrintfRegressSetUp(MPI_Comm,const char *);
1661fcfd50ebSBarry Smith 
1662fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1663fcfd50ebSBarry Smith extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1664fcfd50ebSBarry Smith #endif
1665fcfd50ebSBarry Smith 
166609573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
166709573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
166809573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1669d382aafbSBarry Smith 
1670d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16717087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16727087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1673d382aafbSBarry Smith #endif
1674d382aafbSBarry Smith 
16757087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
16767087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
16777087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
16787087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
16797087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
16807087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
16817087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1682d382aafbSBarry Smith 
16837087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1684d382aafbSBarry Smith 
1685d382aafbSBarry Smith /*S
1686d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1687d382aafbSBarry Smith 
1688d382aafbSBarry Smith    Level: advanced
1689d382aafbSBarry Smith 
1690d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1691d382aafbSBarry Smith S*/
16927087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1693d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
16947087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
16957087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
1696fcfd50ebSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer*);
16977087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
16987087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1699d382aafbSBarry Smith 
1700d382aafbSBarry Smith /*
1701d382aafbSBarry Smith    For use in debuggers
1702d382aafbSBarry Smith */
17037087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
17047087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
17057087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
17067087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
17077087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1708d382aafbSBarry Smith 
1709d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1710d382aafbSBarry Smith #include <memory.h>
1711d382aafbSBarry Smith #endif
1712d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1713d382aafbSBarry Smith #include <stdlib.h>
1714d382aafbSBarry Smith #endif
1715d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1716d382aafbSBarry Smith #include <strings.h>
1717d382aafbSBarry Smith #endif
1718d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1719d382aafbSBarry Smith #include <string.h>
1720d382aafbSBarry Smith #endif
17216c7e564aSBarry Smith 
17226c7e564aSBarry Smith 
1723d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H)
1724d382aafbSBarry Smith #include <xmmintrin.h>
1725d382aafbSBarry Smith #endif
1726d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1727d382aafbSBarry Smith #include <stdint.h>
1728d382aafbSBarry Smith #endif
1729d382aafbSBarry Smith 
1730fcfd50ebSBarry Smith #undef __FUNCT__
1731fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1732d382aafbSBarry Smith /*@C
1733d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1734d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1735d382aafbSBarry Smith    PetscMemmove() in that case.
1736d382aafbSBarry Smith 
1737d382aafbSBarry Smith    Not Collective
1738d382aafbSBarry Smith 
1739d382aafbSBarry Smith    Input Parameters:
1740d382aafbSBarry Smith +  b - pointer to initial memory space
1741d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1742d382aafbSBarry Smith 
1743d382aafbSBarry Smith    Output Parameter:
1744d382aafbSBarry Smith .  a - pointer to copy space
1745d382aafbSBarry Smith 
1746d382aafbSBarry Smith    Level: intermediate
1747d382aafbSBarry Smith 
1748d382aafbSBarry Smith    Compile Option:
1749d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1750d382aafbSBarry Smith                                   for memory copies on double precision values.
1751d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1752d382aafbSBarry Smith                                   for memory copies on double precision values.
1753d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1754d382aafbSBarry Smith                                   for memory copies on double precision values.
1755d382aafbSBarry Smith 
1756d382aafbSBarry Smith    Note:
1757d382aafbSBarry Smith    This routine is analogous to memcpy().
1758d382aafbSBarry Smith 
1759503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1760503cfb0cSBarry Smith 
1761d382aafbSBarry Smith   Concepts: memory^copying
1762d382aafbSBarry Smith   Concepts: copying^memory
1763d382aafbSBarry Smith 
1764d382aafbSBarry Smith .seealso: PetscMemmove()
1765d382aafbSBarry Smith 
1766d382aafbSBarry Smith @*/
17677087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1768d382aafbSBarry Smith {
1769d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1770d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1771d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1772a7e36092SMatthew G Knepley   PetscFunctionBegin;
1773e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1774e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1775a7e36092SMatthew G Knepley #else
1776d382aafbSBarry Smith   PetscFunctionBegin;
1777a7e36092SMatthew G Knepley #endif
1778d382aafbSBarry Smith   if (a != b) {
1779d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1780d382aafbSBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl) {
1781e32f2f54SBarry Smith       SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1782d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1783d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1784d382aafbSBarry Smith     }
1785d382aafbSBarry Smith #endif
1786d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1787d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1788d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1789d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1790d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1791d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1792d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1793d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1794d382aafbSBarry Smith #else
1795d382aafbSBarry Smith       size_t      i;
1796d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1797d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1798d382aafbSBarry Smith #endif
1799d382aafbSBarry Smith     } else {
1800d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1801d382aafbSBarry Smith     }
1802d382aafbSBarry Smith #else
1803d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1804d382aafbSBarry Smith #endif
1805d382aafbSBarry Smith   }
1806d382aafbSBarry Smith   PetscFunctionReturn(0);
1807d382aafbSBarry Smith }
1808d382aafbSBarry Smith 
1809d382aafbSBarry Smith /*@C
1810d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1811d382aafbSBarry Smith 
1812d382aafbSBarry Smith    Not Collective
1813d382aafbSBarry Smith 
1814d382aafbSBarry Smith    Input Parameters:
1815d382aafbSBarry Smith +  a - pointer to beginning memory location
1816d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1817d382aafbSBarry Smith 
1818d382aafbSBarry Smith    Level: intermediate
1819d382aafbSBarry Smith 
1820d382aafbSBarry Smith    Compile Option:
1821d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1822d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1823d382aafbSBarry Smith 
1824503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1825503cfb0cSBarry Smith 
1826d382aafbSBarry Smith    Concepts: memory^zeroing
1827d382aafbSBarry Smith    Concepts: zeroing^memory
1828d382aafbSBarry Smith 
1829d382aafbSBarry Smith .seealso: PetscMemcpy()
1830d382aafbSBarry Smith @*/
18317087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1832d382aafbSBarry Smith {
1833d382aafbSBarry Smith   if (n > 0) {
1834d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1835e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1836d382aafbSBarry Smith #endif
1837d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1838d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1839d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1840d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1841d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1842d382aafbSBarry Smith     } else {
1843d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1844d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1845d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1846d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1847d382aafbSBarry Smith     } else {
1848d382aafbSBarry Smith #endif
1849d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1850d382aafbSBarry Smith       bzero((char *)a,n);
1851d382aafbSBarry Smith #else
1852d382aafbSBarry Smith       memset((char*)a,0,n);
1853d382aafbSBarry Smith #endif
1854d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1855d382aafbSBarry Smith     }
1856d382aafbSBarry Smith #endif
1857d382aafbSBarry Smith   }
1858d382aafbSBarry Smith   return 0;
1859d382aafbSBarry Smith }
1860d382aafbSBarry Smith 
1861d382aafbSBarry Smith /*MC
1862d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1863d382aafbSBarry Smith 
1864eca87e8dSBarry Smith    Synopsis:
1865eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1866eca87e8dSBarry Smith 
1867d382aafbSBarry Smith    Not Collective
1868d382aafbSBarry Smith 
1869d382aafbSBarry Smith    Input Parameters:
1870d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1871d382aafbSBarry Smith .  n - number of elements to fetch
1872d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
187350d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1874d382aafbSBarry Smith 
1875d382aafbSBarry Smith    Level: developer
1876d382aafbSBarry Smith 
1877d382aafbSBarry Smith    Notes:
1878d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1879d382aafbSBarry Smith 
188050d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
188150d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
188250d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
188363cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
188463cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
188563cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1886d382aafbSBarry Smith 
1887d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1888d382aafbSBarry Smith    address).
1889d382aafbSBarry Smith 
1890d382aafbSBarry Smith    Concepts: memory
1891d382aafbSBarry Smith M*/
1892d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1893d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1894d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1895d382aafbSBarry Smith   } while (0)
1896d382aafbSBarry Smith 
1897d382aafbSBarry Smith /*
1898e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1899d382aafbSBarry Smith */
1900d382aafbSBarry Smith #include "petscmatlab.h"
1901d382aafbSBarry Smith 
1902d382aafbSBarry Smith /*
1903d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1904d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1905d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1906d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1907e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1908d382aafbSBarry Smith */
1909d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1910d382aafbSBarry Smith 
1911d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1912d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1913d382aafbSBarry Smith #endif
1914d382aafbSBarry Smith 
19155a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
19165a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1917d382aafbSBarry Smith #endif
1918d382aafbSBarry Smith 
1919d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1920d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1921d382aafbSBarry Smith #endif
1922d382aafbSBarry Smith 
1923d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1924d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1925d382aafbSBarry Smith #endif
1926d382aafbSBarry Smith 
1927d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1928d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1929d382aafbSBarry Smith #endif
1930d382aafbSBarry Smith 
1931d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1932d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1933d382aafbSBarry Smith #endif
1934d382aafbSBarry Smith 
1935d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1936d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1937d382aafbSBarry Smith #endif
1938d382aafbSBarry Smith 
1939d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1940d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1941d382aafbSBarry Smith #endif
1942d382aafbSBarry Smith 
1943d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1944d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1945d382aafbSBarry Smith #endif
1946d382aafbSBarry Smith 
1947d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1948d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1949d382aafbSBarry Smith #endif
1950d382aafbSBarry Smith 
1951d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1952d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1953d382aafbSBarry Smith #endif
1954d382aafbSBarry Smith 
1955d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1956d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1957d382aafbSBarry Smith #endif
1958d382aafbSBarry Smith 
1959d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1960d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1961d382aafbSBarry Smith #endif
1962d382aafbSBarry Smith 
1963d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1964d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1965d382aafbSBarry Smith #endif
1966d382aafbSBarry Smith 
1967d382aafbSBarry Smith #endif
1968d382aafbSBarry Smith 
1969d382aafbSBarry Smith /*
1970d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1971d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1972d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1973d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1974d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1975d382aafbSBarry Smith */
1976d382aafbSBarry Smith #if defined(__cplusplus)
1977d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1978d382aafbSBarry Smith #define EXTERN_C_END }
1979d382aafbSBarry Smith #else
1980d382aafbSBarry Smith #define EXTERN_C_BEGIN
1981d382aafbSBarry Smith #define EXTERN_C_END
1982d382aafbSBarry Smith #endif
1983d382aafbSBarry Smith 
1984d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1985d382aafbSBarry Smith 
1986d382aafbSBarry Smith /*MC
1987d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1988d382aafbSBarry Smith         communication
1989d382aafbSBarry Smith 
1990d382aafbSBarry Smith    Level: beginner
1991d382aafbSBarry Smith 
1992d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1993d382aafbSBarry Smith 
1994d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1995d382aafbSBarry Smith M*/
1996d382aafbSBarry Smith 
1997d382aafbSBarry Smith /*MC
1998d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1999d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
2000d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
2001d382aafbSBarry Smith 
2002d382aafbSBarry Smith 
2003d382aafbSBarry Smith    Level: beginner
2004d382aafbSBarry Smith 
2005d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
2006d382aafbSBarry Smith M*/
2007d382aafbSBarry Smith 
2008d382aafbSBarry Smith /*MC
2009d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith    Level: beginner
2012d382aafbSBarry Smith 
2013d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
2014d382aafbSBarry Smith M*/
2015d382aafbSBarry Smith 
2016d382aafbSBarry Smith /*MC
2017d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
2018d382aafbSBarry Smith    Level: beginner
2019d382aafbSBarry Smith 
2020d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
2021d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2022d382aafbSBarry Smith 
2023d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
2024d382aafbSBarry Smith M*/
2025d382aafbSBarry Smith 
2026d382aafbSBarry Smith /*MC
2027d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
2028d382aafbSBarry Smith 
2029d382aafbSBarry Smith    Level: beginner
2030d382aafbSBarry Smith 
2031d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
2032d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2033d382aafbSBarry Smith 
2034d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2035d382aafbSBarry Smith M*/
2036d382aafbSBarry Smith 
2037d382aafbSBarry Smith /*MC
2038d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2039d382aafbSBarry Smith 
2040d382aafbSBarry Smith    Level: beginner
2041d382aafbSBarry Smith 
2042d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2043d382aafbSBarry Smith           pass this value
2044d382aafbSBarry Smith 
2045d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2046d382aafbSBarry Smith M*/
2047d382aafbSBarry Smith 
2048d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2049d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2050d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2051d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2052d382aafbSBarry Smith #else
2053d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2054d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2055d382aafbSBarry Smith #endif
2056d382aafbSBarry Smith #endif
2057d382aafbSBarry Smith 
2058d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2059d382aafbSBarry Smith 
2060d382aafbSBarry Smith /* Limit MPI to 32-bits */
2061d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2062d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2063d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2064d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2065d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2066d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2067d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2068d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2069d382aafbSBarry Smith 
2070d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2071e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2072e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2073eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2074eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2075d382aafbSBarry Smith 
2076d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2077e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2078eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2079d382aafbSBarry Smith #else
2080d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2081d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2082d382aafbSBarry Smith #endif
2083d382aafbSBarry Smith 
2084d382aafbSBarry Smith #else
2085d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2086d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2087d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2088d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2089d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2090d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2091d382aafbSBarry Smith #endif
2092d382aafbSBarry Smith 
2093d382aafbSBarry Smith 
2094d382aafbSBarry Smith /*
2095d382aafbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used
2096d382aafbSBarry Smith    as a regular user variable.
2097d382aafbSBarry Smith */
2098d382aafbSBarry Smith #if defined(hz)
2099d382aafbSBarry Smith #undef hz
2100d382aafbSBarry Smith #endif
2101d382aafbSBarry Smith 
2102d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2103d382aafbSBarry Smith 
2104d382aafbSBarry Smith 
2105d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2106d382aafbSBarry Smith #include <limits.h>
2107d382aafbSBarry Smith #endif
2108d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2109d382aafbSBarry Smith #include <sys/param.h>
2110d382aafbSBarry Smith #endif
2111d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2112d382aafbSBarry Smith #include <sys/types.h>
2113d382aafbSBarry Smith #endif
2114d382aafbSBarry Smith #if defined(MAXPATHLEN)
2115d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2116d382aafbSBarry Smith #elif defined(MAX_PATH)
2117d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2118d382aafbSBarry Smith #elif defined(_MAX_PATH)
2119d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2120d382aafbSBarry Smith #else
2121d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2122d382aafbSBarry Smith #endif
2123d382aafbSBarry Smith 
2124d382aafbSBarry Smith /* Special support for C++ */
2125d382aafbSBarry Smith #include "petscsys.hh"
21266c7e564aSBarry Smith 
2127d382aafbSBarry Smith 
2128d382aafbSBarry Smith /*MC
2129d382aafbSBarry Smith 
2130d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2131d382aafbSBarry Smith 
2132d382aafbSBarry Smith $    1) classic Fortran 77 style
2133d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2134d382aafbSBarry Smith $       XXX variablename
2135d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2136d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2137d382aafbSBarry Smith $
2138d382aafbSBarry Smith $    2) classic Fortran 90 style
2139d1716517SSatish Balay $#include "finclude/petscXXX.h"
2140d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2141d382aafbSBarry Smith $       XXX variablename
2142d382aafbSBarry Smith $
2143d382aafbSBarry Smith $    3) Using Fortran modules
2144d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2145d382aafbSBarry Smith $         use petscXXXX
2146d382aafbSBarry Smith $       XXX variablename
2147d382aafbSBarry Smith $
2148d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2149d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2150d382aafbSBarry Smith $         use petscXXXX
2151d382aafbSBarry Smith $       type(XXX) variablename
2152e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2153d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2154d382aafbSBarry Smith 
2155d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2156d382aafbSBarry Smith 
2157d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2158d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2159d382aafbSBarry Smith $        integer variablename
2160d382aafbSBarry Smith $
2161d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2162d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2163d382aafbSBarry Smith 
2164d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2165d382aafbSBarry Smith for only a few PETSc functions.
2166d382aafbSBarry Smith 
2167d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2168d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2169d382aafbSBarry Smith you cannot have something like
2170d382aafbSBarry Smith $      PetscInt row,col
2171d382aafbSBarry Smith $      PetscScalar val
2172d382aafbSBarry Smith $        ...
2173d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2174d382aafbSBarry Smith You must instead have
2175d382aafbSBarry Smith $      PetscInt row(1),col(1)
2176d382aafbSBarry Smith $      PetscScalar val(1)
2177d382aafbSBarry Smith $        ...
2178d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2179d382aafbSBarry Smith 
2180d382aafbSBarry Smith 
2181d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2182d382aafbSBarry Smith 
2183d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2184d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2185d382aafbSBarry Smith 
2186d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2187d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2188d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2189d382aafbSBarry Smith 
2190d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2191e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2192d382aafbSBarry Smith 
2193d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2194d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2195d382aafbSBarry Smith 
2196d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2197d382aafbSBarry Smith      automatically by "make allfortranstubs".
2198d382aafbSBarry Smith 
2199e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2200d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2201d382aafbSBarry Smith      include their predecessors
2202d382aafbSBarry Smith 
2203d382aafbSBarry Smith     Level: beginner
2204d382aafbSBarry Smith 
2205d382aafbSBarry Smith M*/
2206d382aafbSBarry Smith 
22077087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
22087087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
22097087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
22107087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
22117087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
22127087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2213d382aafbSBarry Smith 
22147087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
22157087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
22167087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
22177087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
22187087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2219d7aa01a8SHong Zhang extern PetscErrorCode  PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
22207087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
22217087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
22227087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
22237087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
22247087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
22257087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
22267087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
22279b67c4b3SDmitry Karpeev extern PetscErrorCode  PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2228d382aafbSBarry Smith 
22297087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
22307087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2231d382aafbSBarry Smith 
223276bdecfbSBarry Smith /*J
2233d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2234d382aafbSBarry Smith        with an optional dynamic library name, for example
2235d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2236d382aafbSBarry Smith 
2237d382aafbSBarry Smith    Level: beginner
2238d382aafbSBarry Smith 
2239e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2240d382aafbSBarry Smith    with the option --download-sprng
2241d382aafbSBarry Smith 
2242d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
224376bdecfbSBarry Smith J*/
2244d382aafbSBarry Smith #define PetscRandomType char*
2245d382aafbSBarry Smith #define PETSCRAND       "rand"
2246d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2247d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2248d382aafbSBarry Smith 
2249d382aafbSBarry Smith /* Logging support */
22507087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2251d382aafbSBarry Smith 
22527087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2253d382aafbSBarry Smith 
2254d382aafbSBarry Smith /*S
2255d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2256d382aafbSBarry Smith 
2257d382aafbSBarry Smith    Level: intermediate
2258d382aafbSBarry Smith 
2259d382aafbSBarry Smith   Concepts: random numbers
2260d382aafbSBarry Smith 
2261d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2262d382aafbSBarry Smith S*/
2263d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2264d382aafbSBarry Smith 
2265d382aafbSBarry Smith /* Dynamic creation and loading functions */
2266d382aafbSBarry Smith extern PetscFList PetscRandomList;
2267ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2268d382aafbSBarry Smith 
22697087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22707087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22717087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
22727087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
22737087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
22747087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
22757087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
22767087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2277d382aafbSBarry Smith 
2278d382aafbSBarry Smith /*MC
2279d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2280d382aafbSBarry Smith 
2281d382aafbSBarry Smith   Synopsis:
22821890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2283d382aafbSBarry Smith 
2284d382aafbSBarry Smith   Not Collective
2285d382aafbSBarry Smith 
2286d382aafbSBarry Smith   Input Parameters:
2287d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2288d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2289d382aafbSBarry Smith . func_name   - The name of routine to create method context
2290d382aafbSBarry Smith - create_func - The creation routine itself
2291d382aafbSBarry Smith 
2292d382aafbSBarry Smith   Notes:
2293d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2294d382aafbSBarry Smith 
2295d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2296d382aafbSBarry Smith 
2297d382aafbSBarry Smith   Sample usage:
2298d382aafbSBarry Smith .vb
2299d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2300d382aafbSBarry Smith .ve
2301d382aafbSBarry Smith 
2302d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2303d382aafbSBarry Smith .vb
2304d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2305d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2306d382aafbSBarry Smith .ve
2307d382aafbSBarry Smith    or at runtime via the option
2308d382aafbSBarry Smith .vb
2309d382aafbSBarry Smith     -random_type my_random_name
2310d382aafbSBarry Smith .ve
2311d382aafbSBarry Smith 
2312d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2313d382aafbSBarry Smith 
2314d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2315d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2316d382aafbSBarry Smith 
2317d382aafbSBarry Smith   Level: advanced
2318d382aafbSBarry Smith 
2319d382aafbSBarry Smith .keywords: PetscRandom, register
2320d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2321d382aafbSBarry Smith M*/
2322d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2323d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2324d382aafbSBarry Smith #else
2325d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2326d382aafbSBarry Smith #endif
2327d382aafbSBarry Smith 
23287087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
23297087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
23307087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
23317087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
23327087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
23337087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
23347087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
23357087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
2336fcfd50ebSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom*);
2337d382aafbSBarry Smith 
23387087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
23397087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
23407087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
23417087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
23427087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
23437087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
23447087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2345d382aafbSBarry Smith 
23467087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
23477087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
23487087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
23497087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
23507087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
23517087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
23527087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
23537087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
23547087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
23557087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
23567087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
23577087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
23587087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2359d382aafbSBarry Smith 
2360d382aafbSBarry Smith /*
2361d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2362d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2363d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2364d382aafbSBarry Smith   PetscBinarySeek().
2365d382aafbSBarry Smith */
2366d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2367d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2368d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2369d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2370d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2371d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2372d382aafbSBarry Smith 
2373d382aafbSBarry Smith /*E
2374d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2375d382aafbSBarry Smith 
2376d382aafbSBarry Smith   Level: advanced
2377d382aafbSBarry Smith 
2378d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2379d382aafbSBarry Smith E*/
2380d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
23817087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
23827087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
238346090da6SBarry Smith extern PetscErrorCode  PetscByteSwap(void *,PetscDataType,PetscInt);
2384d382aafbSBarry Smith 
23857087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
23867087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
23877087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
23887087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(char*);
23897087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
23907087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2391d382aafbSBarry Smith 
23927087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
23937087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
23947087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
23957087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
23967087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2397d382aafbSBarry Smith 
23987087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2399d382aafbSBarry Smith 
2400d382aafbSBarry Smith /*E
2401d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2402d382aafbSBarry Smith 
2403d382aafbSBarry Smith   Level: beginner
2404d382aafbSBarry Smith 
2405d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2406d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2407d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2408d382aafbSBarry Smith E*/
240911f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2410d382aafbSBarry Smith 
2411d382aafbSBarry Smith /*MC
2412d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2413d382aafbSBarry Smith 
2414d382aafbSBarry Smith     Level: beginner
2415d382aafbSBarry Smith 
2416d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2417eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2418eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2419d382aafbSBarry Smith 
2420d382aafbSBarry Smith M*/
2421d382aafbSBarry Smith 
2422d382aafbSBarry Smith /*MC
2423d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2424d382aafbSBarry Smith                 value into that location
2425d382aafbSBarry Smith 
2426d382aafbSBarry Smith     Level: beginner
2427d382aafbSBarry Smith 
2428d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2429eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2430eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2431d382aafbSBarry Smith 
2432d382aafbSBarry Smith M*/
2433d382aafbSBarry Smith 
2434d382aafbSBarry Smith /*MC
2435d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2436d382aafbSBarry Smith 
2437d382aafbSBarry Smith     Level: beginner
2438d382aafbSBarry Smith 
2439d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2440d382aafbSBarry Smith 
2441d382aafbSBarry Smith M*/
2442d382aafbSBarry Smith 
2443d382aafbSBarry Smith /*S
2444d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2445d382aafbSBarry Smith 
2446d382aafbSBarry Smith    Level: advanced
2447d382aafbSBarry Smith 
2448d382aafbSBarry Smith    Concepts: communicator, create
2449d382aafbSBarry Smith S*/
2450d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2451d382aafbSBarry Smith 
2452d382aafbSBarry Smith struct _n_PetscSubcomm {
2453d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2454d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2455d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2456d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2457d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2458d382aafbSBarry Smith };
2459d382aafbSBarry Smith 
2460638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2461638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2462638faf0bSHong Zhang 
24637087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2464fcfd50ebSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm*);
24657087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24667087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,const PetscSubcommType);
24677087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2468d382aafbSBarry Smith 
246982a7e548SBarry Smith #include <petscctable.h>
247082a7e548SBarry Smith 
2471d382aafbSBarry Smith PETSC_EXTERN_CXX_END
24726c7e564aSBarry Smith 
24739e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24749e03d832SJed Brown #undef __FUNCT__
24759e03d832SJed Brown #define __FUNCT__ "User provided function"
24769e03d832SJed Brown 
2477d382aafbSBarry Smith #endif
2478