1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1720c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 1805035670SJunchao Zhang #define PETSC_HAVE_DEVICE 1905035670SJunchao Zhang #endif 2005035670SJunchao Zhang 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith /* 442c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 45d382aafbSBarry Smith */ 461ec50b02SJed Brown #if defined(__cplusplus) 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 481ec50b02SJed Brown #else 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 501ec50b02SJed Brown #endif 51d382aafbSBarry Smith 52c5e4d11fSDmitry Karpeev /* ========================================================================== */ 53c5e4d11fSDmitry Karpeev /* 54c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 551cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 561cc8b206SBarry Smith file within an extern "C". 57c5e4d11fSDmitry Karpeev */ 58c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 59c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 60c5e4d11fSDmitry Karpeev #endif 61c5e4d11fSDmitry Karpeev 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ed938b00SJed Brown #if defined(__cplusplus) 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 70ed938b00SJed Brown #else 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 72ed938b00SJed Brown #endif 73ed938b00SJed Brown 7458c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7558c433abSLisandro Dalcin 76ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 77014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 78014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8126703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8226703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8326703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 85014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 86014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 88d382aafbSBarry Smith #else 89014dd563SJed Brown # define PETSC_DLLEXPORT 90014dd563SJed Brown # define PETSC_DLLIMPORT 9121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 92014dd563SJed Brown #endif 93014dd563SJed Brown 94014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 96014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 98014dd563SJed Brown #endif 99014dd563SJed Brown 1001cc8b206SBarry Smith /* 1011cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1021cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1031cc8b206SBarry Smith used from C and are always visible in the shared libraries 1041cc8b206SBarry Smith */ 1052c280183SJed Brown #if defined(__cplusplus) 106014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10821f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 109014dd563SJed Brown #else 110014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 111638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1126258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 113d382aafbSBarry Smith #endif 11427710113SBarry Smith 1152c8e378dSBarry Smith #include <petscversion.h> 116a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 117d382aafbSBarry Smith 118d382aafbSBarry Smith /* ========================================================================== */ 119d382aafbSBarry Smith 120d382aafbSBarry Smith /* 121d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 122d382aafbSBarry Smith 123d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 124d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 125d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 126d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 127d382aafbSBarry Smith mpicxx.h directly in their code 128d382aafbSBarry Smith */ 129fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 130d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 131fa9e63e2SJed Brown #endif 132fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 133d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 134fa9e63e2SJed Brown #endif 135e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 136e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 137e771154cSJed Brown #else 1382c8e378dSBarry Smith # include <mpi.h> 139e771154cSJed Brown #endif 14065013866SBarry Smith 1414e1ad211SJed Brown /*MC 1424e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1434e1ad211SJed Brown 1444e1ad211SJed Brown Notes: 1451393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1461393a3abSPatrick Sanan 1474e1ad211SJed Brown Typical usage is within normal code, 1484e1ad211SJed Brown 1494e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1504e1ad211SJed Brown 1514e1ad211SJed Brown but can also be used in the preprocessor, 1524e1ad211SJed Brown 1534e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1544e1ad211SJed Brown $ ... 1554e1ad211SJed Brown $ #else 1564e1ad211SJed Brown 1571393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1584e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1594e1ad211SJed Brown 1601393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1611393a3abSPatrick Sanan 1621393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1631393a3abSPatrick Sanan 1644e1ad211SJed Brown Developer Notes: 1654e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1664e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1674e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1684e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1694e1ad211SJed Brown 1704e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1714e1ad211SJed Brown implementation of variadic macros. 1724e1ad211SJed Brown 1734e1ad211SJed Brown Level: developer 1744e1ad211SJed Brown M*/ 1754e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1764e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1774e1ad211SJed Brown # define PetscDefined_arg_ shift, 1784e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1794e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1804e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1814e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1824e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1834e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1844e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1854e1ad211SJed Brown #endif 1864e1ad211SJed Brown 187d382aafbSBarry Smith /* 188a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 189a7886beaSBarry Smith This usually happens because 190a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 191a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 192a7886beaSBarry Smith */ 193a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 194c9b973beSBarry Smith # if !defined(MPIUNI_H) 195a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 196a7886beaSBarry Smith # endif 19741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 19841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 19941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 20041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 20141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 20241f4af4cSSatish Balay # endif 20341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 20441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 20541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 20641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 20741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 20841f4af4cSSatish Balay # endif 209a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 21041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 211a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 212ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 213a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 214a7886beaSBarry Smith # endif 215a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 216a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 217a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 218ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 219c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 220a7886beaSBarry Smith # endif 221d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 222d97fd468SStefano Zampini # if !defined(MSMPI_VER) 223d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 224d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 225d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 226d97fd468SStefano Zampini # endif 227d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 228d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 229a7886beaSBarry Smith #endif 230a7886beaSBarry Smith 231a7886beaSBarry Smith /* 2322981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 233d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 234d382aafbSBarry Smith */ 235d382aafbSBarry Smith #include <stdio.h> 236d382aafbSBarry Smith 237d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 238d382aafbSBarry Smith #if !defined(MPIAPI) 239d382aafbSBarry Smith #define MPIAPI 240d382aafbSBarry Smith #endif 241d382aafbSBarry Smith 2421cc8b206SBarry Smith /* 2431cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2441cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2451cc8b206SBarry Smith does not match the actual type of the argument being passed in 2461cc8b206SBarry Smith */ 247c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 248894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 249894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2508ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2518ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 252894dd566SJed Brown # endif 253894dd566SJed Brown #endif 254894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 255894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2568ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2578ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 258894dd566SJed Brown #endif 259b3506946SBarry Smith 2605a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 261df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 262e28ce29aSPatrick Sanan 263e28ce29aSPatrick Sanan /*MC 264e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 265e28ce29aSPatrick Sanan 266e28ce29aSPatrick Sanan Notes: 267e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 268e28ce29aSPatrick Sanan 269e28ce29aSPatrick Sanan Level: beginner 270e28ce29aSPatrick Sanan 271e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 272e28ce29aSPatrick Sanan M*/ 273e28ce29aSPatrick Sanan 27437354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 275bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 276a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 277fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 278bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 279a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 280f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 281bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 282a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 283236ed0a3SSatish Balay #else 284bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 285236ed0a3SSatish Balay #endif 286b7b8f77aSBarry Smith 2877cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 288b7b8f77aSBarry Smith 289d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 290bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 291a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 292d382aafbSBarry Smith #else 293d382aafbSBarry Smith # define MPIU_INT MPI_INT 294a05e1a72SSatish Balay # define PetscInt_FMT "d" 295d382aafbSBarry Smith #endif 296d382aafbSBarry Smith 297503cfb0cSBarry Smith /* 298503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 299503cfb0cSBarry Smith */ 300e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 301d382aafbSBarry Smith 302d382aafbSBarry Smith /* 303d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 304d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 305d382aafbSBarry Smith */ 306014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 307d382aafbSBarry Smith 308d382aafbSBarry Smith /* 309d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 310d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 311d382aafbSBarry Smith */ 312014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 313d382aafbSBarry Smith 314d382aafbSBarry Smith /*MC 315d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 316d382aafbSBarry Smith 317d382aafbSBarry Smith Synopsis: 318aaa7dc30SBarry Smith #include <petscsys.h> 319ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 320d382aafbSBarry Smith 321eca87e8dSBarry Smith Not Collective 322eca87e8dSBarry Smith 323d382aafbSBarry Smith Input Parameters: 324d382aafbSBarry Smith . cond - condition or expression 325d382aafbSBarry Smith 326e28ce29aSPatrick Sanan Notes: 327e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 328d382aafbSBarry Smith branch is unlikely. 329d382aafbSBarry Smith 330d382aafbSBarry Smith Level: advanced 331d382aafbSBarry Smith 332cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 333d382aafbSBarry Smith M*/ 334d382aafbSBarry Smith 335d382aafbSBarry Smith /*MC 336d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 337d382aafbSBarry Smith 338d382aafbSBarry Smith Synopsis: 339aaa7dc30SBarry Smith #include <petscsys.h> 34023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 341d382aafbSBarry Smith 342eca87e8dSBarry Smith Not Collective 343eca87e8dSBarry Smith 344d382aafbSBarry Smith Input Parameters: 345d382aafbSBarry Smith . cond - condition or expression 346d382aafbSBarry Smith 347e28ce29aSPatrick Sanan Notes: 348e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 349d382aafbSBarry Smith branch is likely. 350d382aafbSBarry Smith 351d382aafbSBarry Smith Level: advanced 352d382aafbSBarry Smith 353d382aafbSBarry Smith .seealso: PetscUnlikely() 354d382aafbSBarry Smith M*/ 355d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 356d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 357d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 358d382aafbSBarry Smith #else 359cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 360cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 361d382aafbSBarry Smith #endif 362d382aafbSBarry Smith 363cf9c20a2SJed Brown /*MC 364cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 365cf9c20a2SJed Brown 366cf9c20a2SJed Brown Synopsis: 367cf9c20a2SJed Brown #include <petscsys.h> 368cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 369cf9c20a2SJed Brown 370cf9c20a2SJed Brown Not Collective 371cf9c20a2SJed Brown 372cf9c20a2SJed Brown Input Parameters: 373cf9c20a2SJed Brown . cond - condition or expression 374cf9c20a2SJed Brown 375cf9c20a2SJed Brown Notes: 376cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 377cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 378cf9c20a2SJed Brown 379cf9c20a2SJed Brown Level: advanced 380cf9c20a2SJed Brown 381cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 382cf9c20a2SJed Brown M*/ 383cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 384cf9c20a2SJed Brown 385c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 386c8b9133aSSatish Balay 387c8b9133aSSatish Balay #if defined(__INTEL_COMPILER) && !defined(_WIN32) 388c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 3891dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 390c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 391160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 392c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 393160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 394160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 395c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 396c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 397c8b9133aSSatish Balay #else 398c8b9133aSSatish Balay # define PetscPragmaSIMD 399c8b9133aSSatish Balay #endif 400c8b9133aSSatish Balay 401d382aafbSBarry Smith /* 402d382aafbSBarry Smith Declare extern C stuff after including external header files 403d382aafbSBarry Smith */ 404d382aafbSBarry Smith 4056a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 40670b3c8c7SBarry Smith 4078b49ba18SBarry Smith /* 408390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4098b49ba18SBarry Smith */ 4108b49ba18SBarry Smith #include <petscmath.h> 4118b49ba18SBarry Smith 4126a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 413d382aafbSBarry Smith 414d382aafbSBarry Smith /*MC 4150298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 416d382aafbSBarry Smith 417d382aafbSBarry Smith Level: beginner 418d382aafbSBarry Smith 419e28ce29aSPatrick Sanan Note: 420e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 421d382aafbSBarry Smith some default 422d382aafbSBarry Smith 423e28ce29aSPatrick Sanan Fortran Notes: 424e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 425d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 426d382aafbSBarry Smith 427e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 428d382aafbSBarry Smith 429d382aafbSBarry Smith M*/ 4300298fd71SBarry Smith #define PETSC_IGNORE NULL 431d382aafbSBarry Smith 432c528d872SBarry Smith /* This is deprecated */ 433c528d872SBarry Smith #define PETSC_NULL NULL 434c528d872SBarry Smith 435d382aafbSBarry Smith /*MC 436557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 437557d4da8SBarry Smith where you wish PETSc to use the default. 438557d4da8SBarry Smith 439557d4da8SBarry Smith Level: beginner 440557d4da8SBarry Smith 441e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 442557d4da8SBarry Smith 443557d4da8SBarry Smith M*/ 444557d4da8SBarry Smith #define PETSC_DECIDE -1 445557d4da8SBarry Smith 446557d4da8SBarry Smith /*MC 447d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 448d382aafbSBarry Smith where you wish PETSc to compute the required value. 449d382aafbSBarry Smith 450d382aafbSBarry Smith Level: beginner 451d382aafbSBarry Smith 452e28ce29aSPatrick Sanan Developer Note: 453e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 454557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 455557d4da8SBarry Smith 4560298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 459d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 460d382aafbSBarry Smith 461d382aafbSBarry Smith /*MC 462557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 463557d4da8SBarry Smith where you wish PETSc to use the default. 464557d4da8SBarry Smith 465557d4da8SBarry Smith Level: beginner 466557d4da8SBarry Smith 467e28ce29aSPatrick Sanan Fortran Notes: 468e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 469557d4da8SBarry Smith 4700298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 471557d4da8SBarry Smith 472557d4da8SBarry Smith M*/ 473557d4da8SBarry Smith #define PETSC_DEFAULT -2 474557d4da8SBarry Smith 475557d4da8SBarry Smith /*MC 476d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 477ea8fe74dSBarry Smith all the processes that PETSc knows about. 478d382aafbSBarry Smith 479d382aafbSBarry Smith Level: beginner 480d382aafbSBarry Smith 481e28ce29aSPatrick Sanan Notes: 482e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 483d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 484d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 485a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 486a990b902SBarry Smith 487a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 488a990b902SBarry Smith is called because it may not have a valid value yet. 489d382aafbSBarry Smith 490d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 491d382aafbSBarry Smith 492d382aafbSBarry Smith M*/ 493014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 494d382aafbSBarry Smith 495d382aafbSBarry Smith /*MC 496503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 497d382aafbSBarry Smith 498d382aafbSBarry Smith Level: beginner 499d382aafbSBarry Smith 500e28ce29aSPatrick Sanan Notes: 501e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 502a990b902SBarry Smith 503d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 504d382aafbSBarry Smith 505d382aafbSBarry Smith M*/ 506d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 507d382aafbSBarry Smith 5086de5d289SStefano Zampini /*MC 5096de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5106de5d289SStefano Zampini MPI with MPI_Init_thread. 5116de5d289SStefano Zampini 5126de5d289SStefano Zampini Level: beginner 5136de5d289SStefano Zampini 5146de5d289SStefano Zampini Notes: 5156de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5166de5d289SStefano Zampini 5176de5d289SStefano Zampini .seealso: PetscInitialize() 5186de5d289SStefano Zampini 5196de5d289SStefano Zampini M*/ 5206de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5216de5d289SStefano Zampini 522d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5238ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 524014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 525014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5264cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 527d382aafbSBarry Smith 528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 531d382aafbSBarry Smith 5327381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 53305035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 534cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5353c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5367381773fSBarry Smith #endif 5377381773fSBarry Smith 53805035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 53905035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 54005035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5413c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 54205035670SJunchao Zhang #endif 54305035670SJunchao Zhang 54459e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 54559e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 54659e55d94SJunchao Zhang #endif 54759e55d94SJunchao Zhang 54871438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 54971438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 55071438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 55171438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 55271438e86SJunchao Zhang #endif 55371438e86SJunchao Zhang 554540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 555540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 556540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 557540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 558540e20f2SPierre Jolivet #endif 559540e20f2SPierre Jolivet 560d382aafbSBarry Smith /*MC 56195dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 562d382aafbSBarry Smith 563eca87e8dSBarry Smith Synopsis: 564aaa7dc30SBarry Smith #include <petscsys.h> 565eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 566eca87e8dSBarry Smith 567eca87e8dSBarry Smith Not Collective 568eca87e8dSBarry Smith 569d382aafbSBarry Smith Input Parameter: 570d382aafbSBarry Smith . m - number of bytes to allocate 571d382aafbSBarry Smith 572d382aafbSBarry Smith Output Parameter: 573d382aafbSBarry Smith . result - memory allocated 574d382aafbSBarry Smith 575d382aafbSBarry Smith Level: beginner 576d382aafbSBarry Smith 57749d7da52SJed Brown Notes: 57849d7da52SJed Brown Memory is always allocated at least double aligned 579d382aafbSBarry Smith 58049d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 581d382aafbSBarry Smith 582d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 583d382aafbSBarry Smith 584d382aafbSBarry Smith M*/ 585071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 586d382aafbSBarry Smith 587d382aafbSBarry Smith /*MC 5883221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5893221ece2SMatthew G. Knepley 5903221ece2SMatthew G. Knepley Synopsis: 5913221ece2SMatthew G. Knepley #include <petscsys.h> 5923221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5933221ece2SMatthew G. Knepley 5943221ece2SMatthew G. Knepley Not Collective 5953221ece2SMatthew G. Knepley 5963221ece2SMatthew G. Knepley Input Parameters: 5973221ece2SMatthew G. Knepley + m - number of bytes to allocate 59892f119d6SBarry Smith - result - previous memory 5993221ece2SMatthew G. Knepley 6003221ece2SMatthew G. Knepley Output Parameter: 6013221ece2SMatthew G. Knepley . result - new memory allocated 6023221ece2SMatthew G. Knepley 6033221ece2SMatthew G. Knepley Level: developer 6043221ece2SMatthew G. Knepley 6053221ece2SMatthew G. Knepley Notes: 6063221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6073221ece2SMatthew G. Knepley 6083221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6093221ece2SMatthew G. Knepley 6103221ece2SMatthew G. Knepley M*/ 6113221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6123221ece2SMatthew G. Knepley 6133221ece2SMatthew G. Knepley /*MC 614503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 615d382aafbSBarry Smith 616d382aafbSBarry Smith Synopsis: 617aaa7dc30SBarry Smith #include <petscsys.h> 618d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 619d382aafbSBarry Smith 620eca87e8dSBarry Smith Not Collective 621eca87e8dSBarry Smith 622eca87e8dSBarry Smith Input Parameters: 623eca87e8dSBarry Smith . addr - address to align (any pointer type) 624eca87e8dSBarry Smith 625d382aafbSBarry Smith Level: developer 626d382aafbSBarry Smith 627d382aafbSBarry Smith .seealso: PetscMallocAlign() 628d382aafbSBarry Smith 629d382aafbSBarry Smith M*/ 630d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 631d382aafbSBarry Smith 632d382aafbSBarry Smith /*MC 6338f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 6348f51dc47SJunchao Zhang 6358f51dc47SJunchao Zhang Synopsis: 6368f51dc47SJunchao Zhang #include <petscsys.h> 6378f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 6388f51dc47SJunchao Zhang 6398f51dc47SJunchao Zhang Not Collective 6408f51dc47SJunchao Zhang 6418f51dc47SJunchao Zhang Input Parameter: 6428f51dc47SJunchao Zhang . m - number of bytes to allocate 6438f51dc47SJunchao Zhang 6448f51dc47SJunchao Zhang Output Parameter: 6458f51dc47SJunchao Zhang . result - memory allocated 6468f51dc47SJunchao Zhang 6478f51dc47SJunchao Zhang Level: beginner 6488f51dc47SJunchao Zhang 6498f51dc47SJunchao Zhang Notes: 6508f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 6518f51dc47SJunchao Zhang 6528f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 6538f51dc47SJunchao Zhang 6548f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 6558f51dc47SJunchao Zhang 6568f51dc47SJunchao Zhang M*/ 6578f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 6588f51dc47SJunchao Zhang 6598f51dc47SJunchao Zhang /*MC 660785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 661d382aafbSBarry Smith 662eca87e8dSBarry Smith Synopsis: 663aaa7dc30SBarry Smith #include <petscsys.h> 664785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 665785e854fSJed Brown 666785e854fSJed Brown Not Collective 667785e854fSJed Brown 668785e854fSJed Brown Input Parameter: 669390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 670785e854fSJed Brown 671785e854fSJed Brown Output Parameter: 6721fe1b817SJunchao Zhang . r1 - memory allocated 673785e854fSJed Brown 674e28ce29aSPatrick Sanan Note: 675e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 676390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 677390e1bf2SBarry Smith $ PetscInt *id; 678390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 679390e1bf2SBarry Smith not 680390e1bf2SBarry Smith $ PetscInt *id; 681390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 682390e1bf2SBarry Smith 6831fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 684390e1bf2SBarry Smith 685390e1bf2SBarry Smith Level: beginner 686785e854fSJed Brown 6871795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 688785e854fSJed Brown 689785e854fSJed Brown M*/ 6902553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 691785e854fSJed Brown 692785e854fSJed Brown /*MC 6931795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6941795a4d1SJed Brown 6951795a4d1SJed Brown Synopsis: 696aaa7dc30SBarry Smith #include <petscsys.h> 6971795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6981795a4d1SJed Brown 6991795a4d1SJed Brown Not Collective 7001795a4d1SJed Brown 7011795a4d1SJed Brown Input Parameter: 7021795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7031795a4d1SJed Brown 7041795a4d1SJed Brown Output Parameter: 7051fe1b817SJunchao Zhang . r1 - memory allocated 7061795a4d1SJed Brown 707e28ce29aSPatrick Sanan Notes: 708e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 709390e1bf2SBarry Smith 710390e1bf2SBarry Smith Level: beginner 7111795a4d1SJed Brown 7121795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7131795a4d1SJed Brown 7141795a4d1SJed Brown M*/ 7152553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7161795a4d1SJed Brown 7171795a4d1SJed Brown /*MC 718dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 719d382aafbSBarry Smith 720eca87e8dSBarry Smith Synopsis: 721aaa7dc30SBarry Smith #include <petscsys.h> 722dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 723eca87e8dSBarry Smith 724eca87e8dSBarry Smith Not Collective 725eca87e8dSBarry Smith 726d382aafbSBarry Smith Input Parameter: 727d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 728dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 729d382aafbSBarry Smith 730d382aafbSBarry Smith Output Parameter: 731d382aafbSBarry Smith + r1 - memory allocated in first chunk 732d382aafbSBarry Smith - r2 - memory allocated in second chunk 733d382aafbSBarry Smith 734d382aafbSBarry Smith Level: developer 735d382aafbSBarry Smith 7361795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 737d382aafbSBarry Smith 738d382aafbSBarry Smith M*/ 7392553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 740d382aafbSBarry Smith 741d382aafbSBarry Smith /*MC 7421795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 743d382aafbSBarry Smith 744eca87e8dSBarry Smith Synopsis: 745aaa7dc30SBarry Smith #include <petscsys.h> 7461795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 747eca87e8dSBarry Smith 748eca87e8dSBarry Smith Not Collective 749eca87e8dSBarry Smith 750d382aafbSBarry Smith Input Parameter: 751d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7521795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7531795a4d1SJed Brown 7541795a4d1SJed Brown Output Parameter: 7551795a4d1SJed Brown + r1 - memory allocated in first chunk 7561795a4d1SJed Brown - r2 - memory allocated in second chunk 7571795a4d1SJed Brown 7581795a4d1SJed Brown Level: developer 7591795a4d1SJed Brown 7601795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7611795a4d1SJed Brown 7621795a4d1SJed Brown M*/ 7632553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7641795a4d1SJed Brown 7651795a4d1SJed Brown /*MC 766dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 767d382aafbSBarry Smith 768d382aafbSBarry Smith Synopsis: 769aaa7dc30SBarry Smith #include <petscsys.h> 770dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 771d382aafbSBarry Smith 772d382aafbSBarry Smith Not Collective 773d382aafbSBarry Smith 774d382aafbSBarry Smith Input Parameter: 775d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 776d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 777dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 778d382aafbSBarry Smith 779d382aafbSBarry Smith Output Parameter: 780d382aafbSBarry Smith + r1 - memory allocated in first chunk 781d382aafbSBarry Smith . r2 - memory allocated in second chunk 782d382aafbSBarry Smith - r3 - memory allocated in third chunk 783d382aafbSBarry Smith 784d382aafbSBarry Smith Level: developer 785d382aafbSBarry Smith 7861795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 787d382aafbSBarry Smith 788d382aafbSBarry Smith M*/ 7892553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 790d382aafbSBarry Smith 791d382aafbSBarry Smith /*MC 7921795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 793d382aafbSBarry Smith 794eca87e8dSBarry Smith Synopsis: 795aaa7dc30SBarry Smith #include <petscsys.h> 7961795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 797eca87e8dSBarry Smith 798eca87e8dSBarry Smith Not Collective 799eca87e8dSBarry Smith 800d382aafbSBarry Smith Input Parameter: 801d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 802d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8031795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8041795a4d1SJed Brown 8051795a4d1SJed Brown Output Parameter: 8061795a4d1SJed Brown + r1 - memory allocated in first chunk 8071795a4d1SJed Brown . r2 - memory allocated in second chunk 8081795a4d1SJed Brown - r3 - memory allocated in third chunk 8091795a4d1SJed Brown 8101795a4d1SJed Brown Level: developer 8111795a4d1SJed Brown 8121795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8131795a4d1SJed Brown 8141795a4d1SJed Brown M*/ 8152553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8161795a4d1SJed Brown 8171795a4d1SJed Brown /*MC 818dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 819d382aafbSBarry Smith 820d382aafbSBarry Smith Synopsis: 821aaa7dc30SBarry Smith #include <petscsys.h> 822dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 823d382aafbSBarry Smith 824d382aafbSBarry Smith Not Collective 825d382aafbSBarry Smith 826d382aafbSBarry Smith Input Parameter: 827d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 828d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 829d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 830dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 831d382aafbSBarry Smith 832d382aafbSBarry Smith Output Parameter: 833d382aafbSBarry Smith + r1 - memory allocated in first chunk 834d382aafbSBarry Smith . r2 - memory allocated in second chunk 835d382aafbSBarry Smith . r3 - memory allocated in third chunk 836d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 837d382aafbSBarry Smith 838d382aafbSBarry Smith Level: developer 839d382aafbSBarry Smith 8401795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 841d382aafbSBarry Smith 842d382aafbSBarry Smith M*/ 8432553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 844d382aafbSBarry Smith 845d382aafbSBarry Smith /*MC 8461795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 847d382aafbSBarry Smith 848eca87e8dSBarry Smith Synopsis: 849aaa7dc30SBarry Smith #include <petscsys.h> 8501795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 851eca87e8dSBarry Smith 852eca87e8dSBarry Smith Not Collective 853eca87e8dSBarry Smith 854e28ce29aSPatrick Sanan Input Parameters: 855d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 856d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 857d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8581795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8591795a4d1SJed Brown 860e28ce29aSPatrick Sanan Output Parameters: 8611795a4d1SJed Brown + r1 - memory allocated in first chunk 8621795a4d1SJed Brown . r2 - memory allocated in second chunk 8631795a4d1SJed Brown . r3 - memory allocated in third chunk 8641795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8651795a4d1SJed Brown 8661795a4d1SJed Brown Level: developer 8671795a4d1SJed Brown 8681795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8691795a4d1SJed Brown 8701795a4d1SJed Brown M*/ 8712553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8721795a4d1SJed Brown 8731795a4d1SJed Brown /*MC 874dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 875d382aafbSBarry Smith 876d382aafbSBarry Smith Synopsis: 877aaa7dc30SBarry Smith #include <petscsys.h> 878dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 879d382aafbSBarry Smith 880d382aafbSBarry Smith Not Collective 881d382aafbSBarry Smith 882e28ce29aSPatrick Sanan Input Parameters: 883d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 884d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 885d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 886d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 887dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 888d382aafbSBarry Smith 889e28ce29aSPatrick Sanan Output Parameters: 890d382aafbSBarry Smith + r1 - memory allocated in first chunk 891d382aafbSBarry Smith . r2 - memory allocated in second chunk 892d382aafbSBarry Smith . r3 - memory allocated in third chunk 893d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 894d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 895d382aafbSBarry Smith 896d382aafbSBarry Smith Level: developer 897d382aafbSBarry Smith 8981795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 899d382aafbSBarry Smith 900d382aafbSBarry Smith M*/ 9012553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 902d382aafbSBarry Smith 903d382aafbSBarry Smith /*MC 9041795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 905d382aafbSBarry Smith 906eca87e8dSBarry Smith Synopsis: 907aaa7dc30SBarry Smith #include <petscsys.h> 9081795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 909eca87e8dSBarry Smith 910eca87e8dSBarry Smith Not Collective 911eca87e8dSBarry Smith 912e28ce29aSPatrick Sanan Input Parameters: 913d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 914d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 915d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 916d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9171795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9181795a4d1SJed Brown 919e28ce29aSPatrick Sanan Output Parameters: 9201795a4d1SJed Brown + r1 - memory allocated in first chunk 9211795a4d1SJed Brown . r2 - memory allocated in second chunk 9221795a4d1SJed Brown . r3 - memory allocated in third chunk 9231795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9241795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9251795a4d1SJed Brown 9261795a4d1SJed Brown Level: developer 9271795a4d1SJed Brown 9281795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9291795a4d1SJed Brown 9301795a4d1SJed Brown M*/ 9312553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 932d382aafbSBarry Smith 933d382aafbSBarry Smith /*MC 934dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 935d382aafbSBarry Smith 936d382aafbSBarry Smith Synopsis: 937aaa7dc30SBarry Smith #include <petscsys.h> 938dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 939d382aafbSBarry Smith 940d382aafbSBarry Smith Not Collective 941d382aafbSBarry Smith 942e28ce29aSPatrick Sanan Input Parameters: 943d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 944d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 945d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 946d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 947d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 948dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 949d382aafbSBarry Smith 950e28ce29aSPatrick Sanan Output Parameteasr: 951d382aafbSBarry Smith + r1 - memory allocated in first chunk 952d382aafbSBarry Smith . r2 - memory allocated in second chunk 953d382aafbSBarry Smith . r3 - memory allocated in third chunk 954d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 955d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 956d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 957d382aafbSBarry Smith 958d382aafbSBarry Smith Level: developer 959d382aafbSBarry Smith 9601795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 961d382aafbSBarry Smith 962d382aafbSBarry Smith M*/ 9632553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 964d382aafbSBarry Smith 965d382aafbSBarry Smith /*MC 9661795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 967d382aafbSBarry Smith 968eca87e8dSBarry Smith Synopsis: 969aaa7dc30SBarry Smith #include <petscsys.h> 9701795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 971eca87e8dSBarry Smith 972eca87e8dSBarry Smith Not Collective 973eca87e8dSBarry Smith 974e28ce29aSPatrick Sanan Input Parameters: 975d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 976d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 977d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 978d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 979d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9801795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9811795a4d1SJed Brown 982e28ce29aSPatrick Sanan Output Parameters: 9831795a4d1SJed Brown + r1 - memory allocated in first chunk 9841795a4d1SJed Brown . r2 - memory allocated in second chunk 9851795a4d1SJed Brown . r3 - memory allocated in third chunk 9861795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9871795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9881795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9891795a4d1SJed Brown 9901795a4d1SJed Brown Level: developer 9911795a4d1SJed Brown 9921795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9931795a4d1SJed Brown 9941795a4d1SJed Brown M*/ 9952553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9961795a4d1SJed Brown 9971795a4d1SJed Brown /*MC 998dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 999d382aafbSBarry Smith 1000d382aafbSBarry Smith Synopsis: 1001aaa7dc30SBarry Smith #include <petscsys.h> 1002dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1003d382aafbSBarry Smith 1004d382aafbSBarry Smith Not Collective 1005d382aafbSBarry Smith 1006e28ce29aSPatrick Sanan Input Parameters: 1007d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1008d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1009d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1010d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1011d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1012d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1013dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1014d382aafbSBarry Smith 1015e28ce29aSPatrick Sanan Output Parameters: 1016d382aafbSBarry Smith + r1 - memory allocated in first chunk 1017d382aafbSBarry Smith . r2 - memory allocated in second chunk 1018d382aafbSBarry Smith . r3 - memory allocated in third chunk 1019d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1020d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1021d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1022eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1023d382aafbSBarry Smith 1024d382aafbSBarry Smith Level: developer 1025d382aafbSBarry Smith 10261795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1027d382aafbSBarry Smith 1028d382aafbSBarry Smith M*/ 10292553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1030d382aafbSBarry Smith 1031d382aafbSBarry Smith /*MC 10321795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10331795a4d1SJed Brown 10341795a4d1SJed Brown Synopsis: 1035aaa7dc30SBarry Smith #include <petscsys.h> 10361795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10371795a4d1SJed Brown 10381795a4d1SJed Brown Not Collective 10391795a4d1SJed Brown 1040e28ce29aSPatrick Sanan Input Parameters: 10411795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10421795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10431795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10441795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10451795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10461795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10471795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10481795a4d1SJed Brown 1049e28ce29aSPatrick Sanan Output Parameters: 10501795a4d1SJed Brown + r1 - memory allocated in first chunk 10511795a4d1SJed Brown . r2 - memory allocated in second chunk 10521795a4d1SJed Brown . r3 - memory allocated in third chunk 10531795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10541795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10551795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10561795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10571795a4d1SJed Brown 10581795a4d1SJed Brown Level: developer 10591795a4d1SJed Brown 10601795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10611795a4d1SJed Brown 10621795a4d1SJed Brown M*/ 10632553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10641795a4d1SJed Brown 10651795a4d1SJed Brown /*MC 1066503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1067d382aafbSBarry Smith 1068eca87e8dSBarry Smith Synopsis: 1069aaa7dc30SBarry Smith #include <petscsys.h> 1070b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1071eca87e8dSBarry Smith 1072eca87e8dSBarry Smith Not Collective 1073eca87e8dSBarry Smith 1074d382aafbSBarry Smith Output Parameter: 1075b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1076d382aafbSBarry Smith 1077d382aafbSBarry Smith Level: beginner 1078d382aafbSBarry Smith 1079390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1080d382aafbSBarry Smith 1081d382aafbSBarry Smith M*/ 1082b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1083ad0619ddSBarry Smith 1084ad0619ddSBarry Smith /*MC 1085b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1086ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1087ad0619ddSBarry Smith 1088ad0619ddSBarry Smith Synopsis: 1089aaa7dc30SBarry Smith #include <petscsys.h> 1090b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1091ad0619ddSBarry Smith 1092ad0619ddSBarry Smith Not Collective 1093ad0619ddSBarry Smith 1094ad0619ddSBarry Smith Input Parameter: 1095b00a9115SJed Brown . obj - object memory is logged to 1096ad0619ddSBarry Smith 1097ad0619ddSBarry Smith Output Parameter: 1098b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1099ad0619ddSBarry Smith 1100ad0619ddSBarry Smith Level: developer 1101ad0619ddSBarry Smith 1102390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1103ad0619ddSBarry Smith 1104ad0619ddSBarry Smith M*/ 1105d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1106d382aafbSBarry Smith 1107d382aafbSBarry Smith /*MC 1108d382aafbSBarry Smith PetscFree - Frees memory 1109d382aafbSBarry Smith 1110eca87e8dSBarry Smith Synopsis: 1111aaa7dc30SBarry Smith #include <petscsys.h> 1112eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1113eca87e8dSBarry Smith 1114eca87e8dSBarry Smith Not Collective 1115eca87e8dSBarry Smith 1116d382aafbSBarry Smith Input Parameter: 11177f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1118d382aafbSBarry Smith 1119d382aafbSBarry Smith Level: beginner 1120d382aafbSBarry Smith 112149d7da52SJed Brown Notes: 1122390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1123390e1bf2SBarry Smith 112449d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1125d382aafbSBarry Smith 1126390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1127d382aafbSBarry Smith 1128d382aafbSBarry Smith M*/ 1129ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1130d382aafbSBarry Smith 1131d382aafbSBarry Smith /*MC 1132d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1133d382aafbSBarry Smith 1134eca87e8dSBarry Smith Synopsis: 1135aaa7dc30SBarry Smith #include <petscsys.h> 1136eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1137eca87e8dSBarry Smith 1138eca87e8dSBarry Smith Not Collective 1139eca87e8dSBarry Smith 1140e28ce29aSPatrick Sanan Input Parameters: 1141d382aafbSBarry Smith + memory1 - memory to free 1142d382aafbSBarry Smith - memory2 - 2nd memory to free 1143d382aafbSBarry Smith 1144d382aafbSBarry Smith Level: developer 1145d382aafbSBarry Smith 114695452b02SPatrick Sanan Notes: 114795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1148d382aafbSBarry Smith 1149d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1150d382aafbSBarry Smith 1151d382aafbSBarry Smith M*/ 1152ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1153d382aafbSBarry Smith 1154d382aafbSBarry Smith /*MC 1155d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1156d382aafbSBarry Smith 1157eca87e8dSBarry Smith Synopsis: 1158aaa7dc30SBarry Smith #include <petscsys.h> 1159eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1160eca87e8dSBarry Smith 1161eca87e8dSBarry Smith Not Collective 1162eca87e8dSBarry Smith 1163e28ce29aSPatrick Sanan Input Parameters: 1164d382aafbSBarry Smith + memory1 - memory to free 1165d382aafbSBarry Smith . memory2 - 2nd memory to free 1166d382aafbSBarry Smith - memory3 - 3rd memory to free 1167d382aafbSBarry Smith 1168d382aafbSBarry Smith Level: developer 1169d382aafbSBarry Smith 117095452b02SPatrick Sanan Notes: 117195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1172d382aafbSBarry Smith 1173d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1174d382aafbSBarry Smith 1175d382aafbSBarry Smith M*/ 1176ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1177d382aafbSBarry Smith 1178d382aafbSBarry Smith /*MC 1179d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1180d382aafbSBarry Smith 1181eca87e8dSBarry Smith Synopsis: 1182aaa7dc30SBarry Smith #include <petscsys.h> 1183eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1184eca87e8dSBarry Smith 1185eca87e8dSBarry Smith Not Collective 1186eca87e8dSBarry Smith 1187e28ce29aSPatrick Sanan Input Parameters: 1188d382aafbSBarry Smith + m1 - memory to free 1189d382aafbSBarry Smith . m2 - 2nd memory to free 1190d382aafbSBarry Smith . m3 - 3rd memory to free 1191d382aafbSBarry Smith - m4 - 4th memory to free 1192d382aafbSBarry Smith 1193d382aafbSBarry Smith Level: developer 1194d382aafbSBarry Smith 119595452b02SPatrick Sanan Notes: 119695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1197d382aafbSBarry Smith 1198d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1199d382aafbSBarry Smith 1200d382aafbSBarry Smith M*/ 1201ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1202d382aafbSBarry Smith 1203d382aafbSBarry Smith /*MC 1204d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1205d382aafbSBarry Smith 1206eca87e8dSBarry Smith Synopsis: 1207aaa7dc30SBarry Smith #include <petscsys.h> 1208eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1209eca87e8dSBarry Smith 1210eca87e8dSBarry Smith Not Collective 1211eca87e8dSBarry Smith 1212e28ce29aSPatrick Sanan Input Parameters: 1213d382aafbSBarry Smith + m1 - memory to free 1214d382aafbSBarry Smith . m2 - 2nd memory to free 1215d382aafbSBarry Smith . m3 - 3rd memory to free 1216d382aafbSBarry Smith . m4 - 4th memory to free 1217d382aafbSBarry Smith - m5 - 5th memory to free 1218d382aafbSBarry Smith 1219d382aafbSBarry Smith Level: developer 1220d382aafbSBarry Smith 122195452b02SPatrick Sanan Notes: 122295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1223d382aafbSBarry Smith 1224d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1225d382aafbSBarry Smith 1226d382aafbSBarry Smith M*/ 1227ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1228d382aafbSBarry Smith 1229d382aafbSBarry Smith /*MC 1230d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1231d382aafbSBarry Smith 1232eca87e8dSBarry Smith Synopsis: 1233aaa7dc30SBarry Smith #include <petscsys.h> 1234eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1235eca87e8dSBarry Smith 1236eca87e8dSBarry Smith Not Collective 1237eca87e8dSBarry Smith 1238e28ce29aSPatrick Sanan Input Parameters: 1239d382aafbSBarry Smith + m1 - memory to free 1240d382aafbSBarry Smith . m2 - 2nd memory to free 1241d382aafbSBarry Smith . m3 - 3rd memory to free 1242d382aafbSBarry Smith . m4 - 4th memory to free 1243d382aafbSBarry Smith . m5 - 5th memory to free 1244d382aafbSBarry Smith - m6 - 6th memory to free 1245d382aafbSBarry Smith 1246d382aafbSBarry Smith 1247d382aafbSBarry Smith Level: developer 1248d382aafbSBarry Smith 124995452b02SPatrick Sanan Notes: 125095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1251d382aafbSBarry Smith 1252d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1253d382aafbSBarry Smith 1254d382aafbSBarry Smith M*/ 1255ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1256d382aafbSBarry Smith 1257d382aafbSBarry Smith /*MC 1258d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1259d382aafbSBarry Smith 1260eca87e8dSBarry Smith Synopsis: 1261aaa7dc30SBarry Smith #include <petscsys.h> 1262eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1263eca87e8dSBarry Smith 1264eca87e8dSBarry Smith Not Collective 1265eca87e8dSBarry Smith 1266e28ce29aSPatrick Sanan Input Parameters: 1267d382aafbSBarry Smith + m1 - memory to free 1268d382aafbSBarry Smith . m2 - 2nd memory to free 1269d382aafbSBarry Smith . m3 - 3rd memory to free 1270d382aafbSBarry Smith . m4 - 4th memory to free 1271d382aafbSBarry Smith . m5 - 5th memory to free 1272d382aafbSBarry Smith . m6 - 6th memory to free 1273d382aafbSBarry Smith - m7 - 7th memory to free 1274d382aafbSBarry Smith 1275d382aafbSBarry Smith 1276d382aafbSBarry Smith Level: developer 1277d382aafbSBarry Smith 127895452b02SPatrick Sanan Notes: 127995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1280d382aafbSBarry Smith 1281d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1282d382aafbSBarry Smith PetscMalloc7() 1283d382aafbSBarry Smith 1284d382aafbSBarry Smith M*/ 1285ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1286d382aafbSBarry Smith 1287ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1288ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1289071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1290efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12913221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1292ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 129392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1295d382aafbSBarry Smith 1296d382aafbSBarry Smith /* 1297c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1298c1706be6SHong Zhang */ 1299c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1300c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 130131f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 130231f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 130331f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 130431f06eaaSHong Zhang #endif 130559af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 130659af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 130759af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 130859af0bd3SScott Kruger #endif 130959af0bd3SScott Kruger 1310c1706be6SHong Zhang 1311a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 131236763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1313a5057860SBarry Smith 1314a5057860SBarry Smith /* 131566d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1316d382aafbSBarry Smith */ 1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 131892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1321e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1322e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 132392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 132492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1325efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 132692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 132792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1328608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1329608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1330d382aafbSBarry Smith 13316a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1332014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1333014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13358e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1336d382aafbSBarry Smith 1337d382aafbSBarry Smith /* 1338d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1339d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1340d382aafbSBarry Smith functionality and/or error checking. 1341d382aafbSBarry Smith */ 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1344d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1352a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13562f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13612c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 136447340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13656fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13666991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13676991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1369d382aafbSBarry Smith 1370573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1371573b0fb4SBarry Smith 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1375d382aafbSBarry Smith 1376e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1377a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1378a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1379a53986e1SJed Brown 1380d382aafbSBarry Smith /* 1381d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1382d382aafbSBarry Smith */ 1383367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1384570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1385de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1386014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1387014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1388d9822059SBarry Smith #else 1389de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1390d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1391d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1392d9822059SBarry Smith #endif 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1394d382aafbSBarry Smith 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1397eb3f98d2SBarry Smith 139895c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1399d6a4318aSJed Brown 1400639ff905SBarry Smith /* 1401639ff905SBarry Smith Defines PETSc error handling. 1402639ff905SBarry Smith */ 1403639ff905SBarry Smith #include <petscerror.h> 1404d382aafbSBarry Smith 14050700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1406014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1407014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 140981256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 141081256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 141181256985SMatthew G. Knepley 1412d382aafbSBarry Smith 1413d382aafbSBarry Smith /* 1414d382aafbSBarry Smith Routines that get memory usage information from the OS 1415d382aafbSBarry Smith */ 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1419b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1420d382aafbSBarry Smith 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1422d382aafbSBarry Smith 1423d382aafbSBarry Smith /* 1424d382aafbSBarry Smith Initialization of PETSc 1425d382aafbSBarry Smith */ 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1436d382aafbSBarry Smith 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1438607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1439d382aafbSBarry Smith 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1444d382aafbSBarry Smith 1445a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1446a50e088cSMatthew G. Knepley 1447a50e088cSMatthew G. Knepley 1448d382aafbSBarry Smith /* 1449d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14502981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1451d382aafbSBarry Smith */ 1452638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1453638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1454638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1455d382aafbSBarry Smith 1456d382aafbSBarry Smith /* 1457d382aafbSBarry Smith Functions that can act on any PETSc object. 1458d382aafbSBarry Smith */ 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1477bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1478bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14810eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14820eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1484d382aafbSBarry Smith 1485665c2dedSJed Brown #include <petscviewertypes.h> 1486639ff905SBarry Smith #include <petscoptions.h> 1487639ff905SBarry Smith 1488608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1489608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1490608c71bfSMatthew G. Knepley 14910633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14920633abcbSJed Brown 1493c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1494dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1495639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14960005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14970005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1505685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15084099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1510b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1513d382aafbSBarry Smith 1514e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15157aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1516e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1517e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1518e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1519e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1520e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1521e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1522e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1523e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1524e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 152515681b3cSBarry Smith 1526ec7429eaSBarry Smith #else 15277aab2a10SBarry Smith #define PetscSAWsBlock() 0 1528e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1529e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1530e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1531e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1532e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1533e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1534e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1535e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1536e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 153715681b3cSBarry Smith 1538ec7429eaSBarry Smith #endif 1539b90c6cbeSBarry Smith 154082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 154182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 154282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1543*258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1544*258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1545*258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1546*258ec3d2SMatthew G. Knepley #endif 15477d5d4d99SBarry Smith 15485fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1549a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15505fe58b6fSBarry Smith #endif 15517eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1552a64a8e02SBarry Smith 1553140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1554140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1555140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1556140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1557140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1558140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1559d382aafbSBarry Smith 1560d382aafbSBarry Smith /* 1561503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1562d382aafbSBarry Smith link libraries that will be loaded as needed. 1563d382aafbSBarry Smith */ 1564a240a19fSJed Brown 1565a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1566a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1567140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15681c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15691c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 157044ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1571140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1572140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1573140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1574d382aafbSBarry Smith 1575014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1583d382aafbSBarry Smith 1584d382aafbSBarry Smith /* 1585d382aafbSBarry Smith Useful utility routines 1586d382aafbSBarry Smith */ 1587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1589d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1594dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[2],PetscInt[2]); 1595dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[2],PetscReal[2]); 1596d382aafbSBarry Smith 159764ac3b0dSPatrick Sanan /*MC 1598ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1599503cfb0cSBarry Smith 1600e28ce29aSPatrick Sanan Notes: 1601e28ce29aSPatrick Sanan This is useful in cases like 1602503cfb0cSBarry Smith $ int *a; 1603ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 16041cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 160564ac3b0dSPatrick Sanan 160664ac3b0dSPatrick Sanan Level: beginner 160764ac3b0dSPatrick Sanan 160864ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 160964ac3b0dSPatrick Sanan M*/ 1610d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1611503cfb0cSBarry Smith 1612d382aafbSBarry Smith /*MC 1613d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1614d382aafbSBarry Smith 1615d382aafbSBarry Smith Synopsis: 1616aaa7dc30SBarry Smith #include <petscsys.h> 1617659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1618d382aafbSBarry Smith 1619659f7ba0SBarry Smith Collective on comm 1620eca87e8dSBarry Smith 1621d382aafbSBarry Smith Input Parameters: 1622659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1623d382aafbSBarry Smith . format - the usual printf() format string 1624659f7ba0SBarry Smith - args - arguments to be printed 1625d382aafbSBarry Smith 1626d382aafbSBarry Smith Level: developer 1627d382aafbSBarry Smith 1628d382aafbSBarry Smith Fortran Note: 1629d382aafbSBarry Smith This routine is not supported in Fortran. 1630d382aafbSBarry Smith 1631659f7ba0SBarry Smith Note: 1632659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1633659f7ba0SBarry Smith 1634659f7ba0SBarry Smith To use, write your own function, for example, 1635659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1636659f7ba0SBarry Smith ${ 1637659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1638659f7ba0SBarry Smith $} 1639659f7ba0SBarry Smith then do the assigment 1640659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1641659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1642659f7ba0SBarry Smith 1643659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1644d382aafbSBarry Smith 1645d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1646d382aafbSBarry Smith M*/ 1647014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1648d382aafbSBarry Smith 1649fcfd50ebSBarry Smith /* 1650fcfd50ebSBarry Smith Defines PETSc profiling. 1651fcfd50ebSBarry Smith */ 16522c8e378dSBarry Smith #include <petsclog.h> 1653fcfd50ebSBarry Smith 1654fcfd50ebSBarry Smith /* 1655fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1656fcfd50ebSBarry Smith */ 1657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1660014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1662014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1663014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16641b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1665fcfd50ebSBarry Smith 1666014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1667014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1668014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1669d382aafbSBarry Smith 1670d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1671d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1672d781fa04SBarry Smith 1673d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1674014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1675016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 167674ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1677d382aafbSBarry Smith #endif 1678d382aafbSBarry Smith 1679014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 16810ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1686d382aafbSBarry Smith 1687014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1688014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1693b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1694d382aafbSBarry Smith 1695d382aafbSBarry Smith /* 1696d382aafbSBarry Smith For use in debuggers 1697d382aafbSBarry Smith */ 1698014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1699014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1700014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1701014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1702014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1703d382aafbSBarry Smith 1704a663daf8SBarry Smith #include <stddef.h> 1705a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1706d382aafbSBarry Smith #include <stdlib.h> 17076c7e564aSBarry Smith 17084a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1709d382aafbSBarry Smith #include <xmmintrin.h> 1710d382aafbSBarry Smith #endif 1711d382aafbSBarry Smith 1712d382aafbSBarry Smith /*@C 1713580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1714580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1715580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1716580bdb30SBarry Smith 1717580bdb30SBarry Smith Not Collective 1718580bdb30SBarry Smith 1719580bdb30SBarry Smith Input Parameters: 1720580bdb30SBarry Smith + b - pointer to initial memory space 1721580bdb30SBarry Smith . a - pointer to copy space 1722580bdb30SBarry Smith - n - length (in bytes) of space to copy 1723580bdb30SBarry Smith 1724580bdb30SBarry Smith Level: intermediate 1725580bdb30SBarry Smith 1726580bdb30SBarry Smith Note: 1727857a15f1SBarry Smith PetscArraymove() is preferred 1728580bdb30SBarry Smith This routine is analogous to memmove(). 1729580bdb30SBarry Smith 1730580bdb30SBarry Smith Developers Note: This is inlined for performance 1731580bdb30SBarry Smith 1732580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1733580bdb30SBarry Smith PetscArraymove() 1734580bdb30SBarry Smith @*/ 1735580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1736580bdb30SBarry Smith { 1737580bdb30SBarry Smith PetscFunctionBegin; 1738580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1739580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1740580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1741580bdb30SBarry Smith if (a < b) { 1742580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1743580bdb30SBarry Smith else { 1744580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1745580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1746580bdb30SBarry Smith } 1747580bdb30SBarry Smith } else { 1748580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1749580bdb30SBarry Smith else { 1750580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1751580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1752580bdb30SBarry Smith } 1753580bdb30SBarry Smith } 1754580bdb30SBarry Smith #else 1755580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1756580bdb30SBarry Smith #endif 1757580bdb30SBarry Smith PetscFunctionReturn(0); 1758580bdb30SBarry Smith } 1759580bdb30SBarry Smith 1760d382aafbSBarry Smith /*@C 1761d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1762d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1763d382aafbSBarry Smith PetscMemmove() in that case. 1764d382aafbSBarry Smith 1765d382aafbSBarry Smith Not Collective 1766d382aafbSBarry Smith 1767d382aafbSBarry Smith Input Parameters: 1768d382aafbSBarry Smith + b - pointer to initial memory space 1769d382aafbSBarry Smith - n - length (in bytes) of space to copy 1770d382aafbSBarry Smith 1771d382aafbSBarry Smith Output Parameter: 1772d382aafbSBarry Smith . a - pointer to copy space 1773d382aafbSBarry Smith 1774d382aafbSBarry Smith Level: intermediate 1775d382aafbSBarry Smith 1776d382aafbSBarry Smith Compile Option: 1777d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1778d382aafbSBarry Smith for memory copies on double precision values. 1779d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1780d382aafbSBarry Smith for memory copies on double precision values. 1781d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1782d382aafbSBarry Smith for memory copies on double precision values. 1783d382aafbSBarry Smith 1784d382aafbSBarry Smith Note: 1785580bdb30SBarry Smith Prefer PetscArraycpy() 1786d382aafbSBarry Smith This routine is analogous to memcpy(). 17871fd49c25SBarry Smith Not available from Fortran 17881fd49c25SBarry Smith 1789f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1790f5f57ec0SBarry Smith 1791580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1792d382aafbSBarry Smith 1793d382aafbSBarry Smith @*/ 17947087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1795d382aafbSBarry Smith { 1796d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1797c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1798c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1799a7e36092SMatthew G Knepley PetscFunctionBegin; 1800e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1801e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1802a7e36092SMatthew G Knepley #else 1803d382aafbSBarry Smith PetscFunctionBegin; 1804a7e36092SMatthew G Knepley #endif 1805a47a537aSLisandro Dalcin if (a != b && n > 0) { 1806d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1807e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1808d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1809d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1810d382aafbSBarry Smith #endif 1811d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1812c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1813d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1814d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1815c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1816c5df96a5SBarry Smith PetscErrorCode ierr; 1817c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18188b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1819d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1820d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1821d382aafbSBarry Smith #else 1822d382aafbSBarry Smith size_t i; 1823d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1824d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1825d382aafbSBarry Smith #endif 1826d382aafbSBarry Smith } else { 1827d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1828d382aafbSBarry Smith } 1829d382aafbSBarry Smith #else 1830d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1831d382aafbSBarry Smith #endif 1832d382aafbSBarry Smith } 1833d382aafbSBarry Smith PetscFunctionReturn(0); 1834d382aafbSBarry Smith } 1835d382aafbSBarry Smith 1836d382aafbSBarry Smith /*@C 1837d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1838d382aafbSBarry Smith 1839d382aafbSBarry Smith Not Collective 1840d382aafbSBarry Smith 1841d382aafbSBarry Smith Input Parameters: 1842d382aafbSBarry Smith + a - pointer to beginning memory location 1843d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1844d382aafbSBarry Smith 1845d382aafbSBarry Smith Level: intermediate 1846d382aafbSBarry Smith 1847d382aafbSBarry Smith Compile Option: 1848d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1849d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1850d382aafbSBarry Smith 18511fd49c25SBarry Smith Not available from Fortran 1852857a15f1SBarry Smith Prefer PetscArrayzero() 18531fd49c25SBarry Smith 1854503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1855503cfb0cSBarry Smith 1856580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1857d382aafbSBarry Smith @*/ 18587087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1859d382aafbSBarry Smith { 1860d382aafbSBarry Smith if (n > 0) { 1861d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 186218703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1863d382aafbSBarry Smith #endif 1864d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1865d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1866d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1867d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1868d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1869d382aafbSBarry Smith } else { 1870d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1871d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1872d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1873d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1874d382aafbSBarry Smith } else { 1875d382aafbSBarry Smith #endif 1876d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1877d382aafbSBarry Smith bzero((char *)a,n); 1878d382aafbSBarry Smith #else 1879d382aafbSBarry Smith memset((char*)a,0,n); 1880d382aafbSBarry Smith #endif 1881d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1882d382aafbSBarry Smith } 1883d382aafbSBarry Smith #endif 1884d382aafbSBarry Smith } 1885d382aafbSBarry Smith return 0; 1886d382aafbSBarry Smith } 1887d382aafbSBarry Smith 1888d382aafbSBarry Smith /*MC 1889580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1890580bdb30SBarry Smith 1891580bdb30SBarry Smith Synopsis: 1892580bdb30SBarry Smith #include <petscsys.h> 1893580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1894580bdb30SBarry Smith 1895580bdb30SBarry Smith Not Collective 1896580bdb30SBarry Smith 1897580bdb30SBarry Smith Input Parameters: 1898580bdb30SBarry Smith + str1 - First array 1899580bdb30SBarry Smith . str2 - Second array 1900580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1901580bdb30SBarry Smith 1902580bdb30SBarry Smith Output Parameters: 1903580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1904580bdb30SBarry Smith 1905580bdb30SBarry Smith Level: intermediate 1906580bdb30SBarry Smith 1907580bdb30SBarry Smith Note: 1908857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1909580bdb30SBarry Smith The arrays must be of the same type 1910580bdb30SBarry Smith 1911580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1912580bdb30SBarry Smith PetscArraymove() 1913580bdb30SBarry Smith M*/ 19149e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1915580bdb30SBarry Smith 19168f8f2f0dSBarry Smith /*MC 1917580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1918580bdb30SBarry Smith do not overlap 1919580bdb30SBarry Smith 1920580bdb30SBarry Smith Synopsis: 1921580bdb30SBarry Smith #include <petscsys.h> 1922580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1923580bdb30SBarry Smith 1924580bdb30SBarry Smith Not Collective 1925580bdb30SBarry Smith 1926580bdb30SBarry Smith Input Parameters: 1927580bdb30SBarry Smith + str1 - First array 1928580bdb30SBarry Smith . str2 - Second array 1929580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1930580bdb30SBarry Smith 1931580bdb30SBarry Smith Level: intermediate 1932580bdb30SBarry Smith 1933580bdb30SBarry Smith Note: 1934857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1935580bdb30SBarry Smith The arrays must be of the same type 1936580bdb30SBarry Smith 1937580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1938580bdb30SBarry Smith M*/ 19399e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1940580bdb30SBarry Smith 19418f8f2f0dSBarry Smith /*MC 1942580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1943580bdb30SBarry Smith 1944580bdb30SBarry Smith Synopsis: 1945580bdb30SBarry Smith #include <petscsys.h> 1946580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1947580bdb30SBarry Smith 1948580bdb30SBarry Smith Not Collective 1949580bdb30SBarry Smith 1950580bdb30SBarry Smith Input Parameters: 1951de25709eSStefano Zampini + str1 - First array (destination) 1952de25709eSStefano Zampini . str2 - Second array (source) 1953580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1954580bdb30SBarry Smith 1955580bdb30SBarry Smith Level: intermediate 1956580bdb30SBarry Smith 1957580bdb30SBarry Smith Note: 1958857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1959580bdb30SBarry Smith The arrays must be of the same type 1960580bdb30SBarry Smith 1961580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1962580bdb30SBarry Smith M*/ 19639e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1964580bdb30SBarry Smith 19658f8f2f0dSBarry Smith /*MC 1966580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1967580bdb30SBarry Smith 1968580bdb30SBarry Smith Synopsis: 1969580bdb30SBarry Smith #include <petscsys.h> 1970580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1971580bdb30SBarry Smith 1972580bdb30SBarry Smith Not Collective 1973580bdb30SBarry Smith 1974580bdb30SBarry Smith Input Parameters: 1975580bdb30SBarry Smith + str1 - array 1976580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1977580bdb30SBarry Smith 1978580bdb30SBarry Smith Level: intermediate 1979580bdb30SBarry Smith 1980580bdb30SBarry Smith Note: 1981857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1982580bdb30SBarry Smith 1983580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1984580bdb30SBarry Smith M*/ 19859e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1986580bdb30SBarry Smith 1987d382aafbSBarry Smith /*MC 1988d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1989d382aafbSBarry Smith 1990eca87e8dSBarry Smith Synopsis: 1991aaa7dc30SBarry Smith #include <petscsys.h> 1992eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1993eca87e8dSBarry Smith 1994d382aafbSBarry Smith Not Collective 1995d382aafbSBarry Smith 1996d382aafbSBarry Smith Input Parameters: 1997d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1998d382aafbSBarry Smith . n - number of elements to fetch 1999d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 200050d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2001d382aafbSBarry Smith 2002d382aafbSBarry Smith Level: developer 2003d382aafbSBarry Smith 2004d382aafbSBarry Smith Notes: 2005d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2006d382aafbSBarry Smith 200750d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 200850d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 200950d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 201063cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 201163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 201263cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2013d382aafbSBarry Smith 2014d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2015d382aafbSBarry Smith address). 2016d382aafbSBarry Smith 2017d382aafbSBarry Smith M*/ 2018d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2019d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2020d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2021d382aafbSBarry Smith } while (0) 2022d382aafbSBarry Smith 2023d382aafbSBarry Smith /* 2024d382aafbSBarry Smith Determine if some of the kernel computation routines use 2025d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2026d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2027d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2028e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2029d382aafbSBarry Smith */ 2030d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2031d382aafbSBarry Smith 2032d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2033d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2034d382aafbSBarry Smith #endif 2035d382aafbSBarry Smith 20365a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20375a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2038d382aafbSBarry Smith #endif 2039d382aafbSBarry Smith 2040d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2041d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2042d382aafbSBarry Smith #endif 2043d382aafbSBarry Smith 2044d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2045d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2046d382aafbSBarry Smith #endif 2047d382aafbSBarry Smith 2048d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2049d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2050d382aafbSBarry Smith #endif 2051d382aafbSBarry Smith 2052d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2053d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2054d382aafbSBarry Smith #endif 2055d382aafbSBarry Smith 2056d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2057d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2058d382aafbSBarry Smith #endif 2059d382aafbSBarry Smith 2060d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2061d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2062d382aafbSBarry Smith #endif 2063d382aafbSBarry Smith 2064d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2065d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2066d382aafbSBarry Smith #endif 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2069d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2070d382aafbSBarry Smith #endif 2071d382aafbSBarry Smith 2072d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2073d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2074d382aafbSBarry Smith #endif 2075d382aafbSBarry Smith 2076d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2077d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2078d382aafbSBarry Smith #endif 2079d382aafbSBarry Smith 2080d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2081d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2082d382aafbSBarry Smith #endif 2083d382aafbSBarry Smith 2084d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2085d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2086d382aafbSBarry Smith #endif 2087d382aafbSBarry Smith 2088d382aafbSBarry Smith #endif 2089d382aafbSBarry Smith 2090d382aafbSBarry Smith /* 2091d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2092d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2093d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2094d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2095d382aafbSBarry Smith ugly extern "C" {} wrappers. 2096d382aafbSBarry Smith */ 2097d382aafbSBarry Smith #if defined(__cplusplus) 2098d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2099d382aafbSBarry Smith # define EXTERN_C_END } 2100d382aafbSBarry Smith #else 2101d382aafbSBarry Smith # define EXTERN_C_BEGIN 2102d382aafbSBarry Smith # define EXTERN_C_END 2103d382aafbSBarry Smith #endif 2104d382aafbSBarry Smith 2105d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2106d382aafbSBarry Smith 2107d382aafbSBarry Smith /*MC 2108d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2109d382aafbSBarry Smith communication 2110d382aafbSBarry Smith 2111d382aafbSBarry Smith Level: beginner 2112d382aafbSBarry Smith 2113d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2114d382aafbSBarry Smith 2115d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2116d382aafbSBarry Smith M*/ 2117d382aafbSBarry Smith 2118d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2119014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2120014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2121c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2122c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2123c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2124c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2125d382aafbSBarry Smith #endif 2126d382aafbSBarry Smith 2127d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2128d382aafbSBarry Smith 2129d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2130d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2131d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2132d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2133d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2134d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2135eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 2136d382aafbSBarry Smith 213761b0d812SBarry Smith /*@C 2138c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2139c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2140c73702f5SBarry Smith 2141c73702f5SBarry Smith Not Collective 2142c73702f5SBarry Smith 2143c73702f5SBarry Smith Input Parameter: 2144c73702f5SBarry Smith . a - the PetscInt64 value 2145c73702f5SBarry Smith 2146c73702f5SBarry Smith Output Parameter: 2147c73702f5SBarry Smith . b - the resulting PetscInt value 2148c73702f5SBarry Smith 2149c73702f5SBarry Smith Level: advanced 2150c73702f5SBarry Smith 2151c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2152c73702f5SBarry Smith 2153c73702f5SBarry Smith Not available from Fortran 2154c73702f5SBarry Smith 215561778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2156c73702f5SBarry Smith @*/ 2157c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2158c73702f5SBarry Smith { 2159c73702f5SBarry Smith PetscFunctionBegin; 2160c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2161c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2162c73702f5SBarry Smith #endif 2163c73702f5SBarry Smith *b = (PetscInt)(a); 2164c73702f5SBarry Smith PetscFunctionReturn(0); 2165c73702f5SBarry Smith } 2166c73702f5SBarry Smith 2167c73702f5SBarry Smith /*@C 216861b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 216961b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 217061b0d812SBarry Smith 217161b0d812SBarry Smith Not Collective 217261b0d812SBarry Smith 217361b0d812SBarry Smith Input Parameter: 217461b0d812SBarry Smith . a - the PetscInt value 217561b0d812SBarry Smith 217661b0d812SBarry Smith Output Parameter: 217761b0d812SBarry Smith . b - the resulting PetscBLASInt value 217861b0d812SBarry Smith 217961b0d812SBarry Smith Level: advanced 218061b0d812SBarry Smith 21810bc7d38cSBarry Smith Notes: 21821fd49c25SBarry Smith Not available from Fortran 2183f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 21841fd49c25SBarry Smith 2185c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 218661b0d812SBarry Smith @*/ 2187c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2188c5df96a5SBarry Smith { 2189c5df96a5SBarry Smith PetscFunctionBegin; 2190c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 219173f49a0bSSatish Balay *b = 0; 219261778c46SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array is too long for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running"); 2193c5df96a5SBarry Smith #endif 21940bc7d38cSBarry Smith if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2195c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2196c5df96a5SBarry Smith PetscFunctionReturn(0); 2197c5df96a5SBarry Smith } 2198c5df96a5SBarry Smith 219961b0d812SBarry Smith /*@C 2200eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2201eee0c0a6SToby Isaac 2202eee0c0a6SToby Isaac Not Collective 2203eee0c0a6SToby Isaac 2204eee0c0a6SToby Isaac Input Parameter: 2205eee0c0a6SToby Isaac . a - the PetscInt value 2206eee0c0a6SToby Isaac 2207eee0c0a6SToby Isaac Output Parameter: 2208eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2209eee0c0a6SToby Isaac 2210eee0c0a6SToby Isaac Level: advanced 2211eee0c0a6SToby Isaac 2212eee0c0a6SToby Isaac Notes: 2213eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2214eee0c0a6SToby Isaac 2215eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2216eee0c0a6SToby Isaac @*/ 2217eee0c0a6SToby Isaac PETSC_STATIC_INLINE PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscBLASInt *b) 2218eee0c0a6SToby Isaac { 2219eee0c0a6SToby Isaac PetscFunctionBegin; 2220eee0c0a6SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 2221eee0c0a6SToby Isaac *b = 0; 2222eee0c0a6SToby Isaac if ((a) > PETSC_CUBLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array is too long for cuBLAS, which is restricted to 32 bit integers."); 2223eee0c0a6SToby Isaac #endif 2224eee0c0a6SToby Isaac if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); 2225eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2226eee0c0a6SToby Isaac PetscFunctionReturn(0); 2227eee0c0a6SToby Isaac } 2228eee0c0a6SToby Isaac 2229eee0c0a6SToby Isaac /*@C 223061b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 223161b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 223261b0d812SBarry Smith 223361b0d812SBarry Smith Not Collective 223461b0d812SBarry Smith 223561b0d812SBarry Smith Input Parameter: 223661b0d812SBarry Smith . a - the PetscInt value 223761b0d812SBarry Smith 223861b0d812SBarry Smith Output Parameter: 223961b0d812SBarry Smith . b - the resulting PetscMPIInt value 224061b0d812SBarry Smith 224161b0d812SBarry Smith Level: advanced 224261b0d812SBarry Smith 22431fd49c25SBarry Smith Not available from Fortran 22441fd49c25SBarry Smith 2245c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 224661b0d812SBarry Smith @*/ 22474dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22484dc2109aSBarry Smith { 22494dc2109aSBarry Smith PetscFunctionBegin; 22504dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 225173f49a0bSSatish Balay *b = 0; 225261778c46SBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI, which is restricted to 32 bit integers"); 22534dc2109aSBarry Smith #endif 2254c73702f5SBarry Smith *b = (PetscMPIInt)(a); 22554dc2109aSBarry Smith PetscFunctionReturn(0); 22564dc2109aSBarry Smith } 22574dc2109aSBarry Smith 2258bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 22592f18eb33SBarry Smith 22602f18eb33SBarry Smith /*@C 22612f18eb33SBarry Smith 22622f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22632f18eb33SBarry Smith 22642f18eb33SBarry Smith Not Collective 22652f18eb33SBarry Smith 22662f18eb33SBarry Smith Input Parameter: 22672f18eb33SBarry Smith + a - the PetscReal value 22682f18eb33SBarry Smith - b - the second value 22692f18eb33SBarry Smith 2270390e1bf2SBarry Smith Returns: 2271390e1bf2SBarry Smith the result as a PetscInt value 22722f18eb33SBarry Smith 2273bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22742f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22752f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22762f18eb33SBarry Smith 2277e28ce29aSPatrick Sanan Developers Note: 2278e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22792f18eb33SBarry Smith 22802f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22812f18eb33SBarry Smith 22821fd49c25SBarry Smith Not available from Fortran 22831fd49c25SBarry Smith 22842f18eb33SBarry Smith Level: advanced 22852f18eb33SBarry Smith 228661778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 22872f18eb33SBarry Smith @*/ 22882f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 22892f18eb33SBarry Smith { 2290bafee8b4SSatish Balay PetscInt64 r; 22912f18eb33SBarry Smith 2292bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 22932f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22942f18eb33SBarry Smith return (PetscInt) r; 22952f18eb33SBarry Smith } 22962f18eb33SBarry Smith 22972f18eb33SBarry Smith /*@C 22982f18eb33SBarry Smith 22992f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23002f18eb33SBarry Smith 23012f18eb33SBarry Smith Not Collective 23022f18eb33SBarry Smith 23032f18eb33SBarry Smith Input Parameter: 23042f18eb33SBarry Smith + a - the PetscInt value 23052f18eb33SBarry Smith - b - the second value 23062f18eb33SBarry Smith 2307390e1bf2SBarry Smith Returns: 2308390e1bf2SBarry Smith the result as a PetscInt value 23092f18eb33SBarry Smith 2310bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23112f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23122f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23132f18eb33SBarry Smith 23141fd49c25SBarry Smith Not available from Fortran 23151fd49c25SBarry Smith 23162f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23172f18eb33SBarry Smith 23182f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23192f18eb33SBarry Smith 23202f18eb33SBarry Smith Level: advanced 23212f18eb33SBarry Smith 232261778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23232f18eb33SBarry Smith @*/ 23242f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23252f18eb33SBarry Smith { 2326bafee8b4SSatish Balay PetscInt64 r; 23272f18eb33SBarry Smith 2328bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23292f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23302f18eb33SBarry Smith return (PetscInt) r; 23312f18eb33SBarry Smith } 23322f18eb33SBarry Smith 2333f91af8c7SBarry Smith /*@C 2334f91af8c7SBarry Smith 2335f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2336f91af8c7SBarry Smith 2337f91af8c7SBarry Smith Not Collective 2338f91af8c7SBarry Smith 2339f91af8c7SBarry Smith Input Parameter: 2340f91af8c7SBarry Smith + a - the PetscInt value 2341f91af8c7SBarry Smith - b - the second value 2342f91af8c7SBarry Smith 2343390e1bf2SBarry Smith Returns: 2344390e1bf2SBarry Smith the result as a PetscInt value 2345f91af8c7SBarry Smith 2346bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2347f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2348f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2349f91af8c7SBarry Smith 2350f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2351f91af8c7SBarry Smith 2352f5f57ec0SBarry Smith Not available from Fortran 2353f5f57ec0SBarry Smith 2354f91af8c7SBarry Smith Level: advanced 2355f91af8c7SBarry Smith 235661778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2357f91af8c7SBarry Smith @*/ 2358f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2359f91af8c7SBarry Smith { 2360bafee8b4SSatish Balay PetscInt64 r; 2361f91af8c7SBarry Smith 2362bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2363f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2364f91af8c7SBarry Smith return (PetscInt) r; 2365f91af8c7SBarry Smith } 2366f91af8c7SBarry Smith 23672f18eb33SBarry Smith /*@C 23682f18eb33SBarry Smith 23692f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23702f18eb33SBarry Smith 23712f18eb33SBarry Smith Not Collective 23722f18eb33SBarry Smith 23732f18eb33SBarry Smith Input Parameter: 23742f18eb33SBarry Smith + a - the PetscInt value 23752f18eb33SBarry Smith - b - the second value 23762f18eb33SBarry Smith 23772f18eb33SBarry Smith Output Parameter:ma 2378390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 23792f18eb33SBarry Smith 2380bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 23812f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 23822f18eb33SBarry Smith 2383f5f57ec0SBarry Smith Not available from Fortran 2384f5f57ec0SBarry Smith 2385220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 23862f18eb33SBarry Smith 23872f18eb33SBarry Smith Level: advanced 23882f18eb33SBarry Smith 2389220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 23902f18eb33SBarry Smith @*/ 23912f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 23922f18eb33SBarry Smith { 2393bafee8b4SSatish Balay PetscInt64 r; 23942f18eb33SBarry Smith 23952f18eb33SBarry Smith PetscFunctionBegin; 2396bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23972f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 239861778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 23992f18eb33SBarry Smith #endif 2400f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2401f91af8c7SBarry Smith PetscFunctionReturn(0); 2402f91af8c7SBarry Smith } 2403f91af8c7SBarry Smith 2404f91af8c7SBarry Smith /*@C 2405f91af8c7SBarry Smith 2406fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2407f91af8c7SBarry Smith 2408f91af8c7SBarry Smith Not Collective 2409f91af8c7SBarry Smith 2410f91af8c7SBarry Smith Input Parameter: 2411f91af8c7SBarry Smith + a - the PetscInt value 2412f91af8c7SBarry Smith - b - the second value 2413f91af8c7SBarry Smith 2414f91af8c7SBarry Smith Output Parameter:ma 2415390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2416f91af8c7SBarry Smith 2417bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2418f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2419f91af8c7SBarry Smith 2420f5f57ec0SBarry Smith Not available from Fortran 2421f5f57ec0SBarry Smith 2422f91af8c7SBarry Smith Level: advanced 2423f91af8c7SBarry Smith 242461778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2425f91af8c7SBarry Smith @*/ 2426f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2427f91af8c7SBarry Smith { 2428bafee8b4SSatish Balay PetscInt64 r; 2429f91af8c7SBarry Smith 2430f91af8c7SBarry Smith PetscFunctionBegin; 2431bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2432f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 243361778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2434f91af8c7SBarry Smith #endif 2435f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 24362f18eb33SBarry Smith PetscFunctionReturn(0); 24372f18eb33SBarry Smith } 2438c5df96a5SBarry Smith 2439d382aafbSBarry Smith /* 24402981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2441d382aafbSBarry Smith */ 2442d382aafbSBarry Smith #if defined(hz) 2443d382aafbSBarry Smith # undef hz 2444d382aafbSBarry Smith #endif 2445d382aafbSBarry Smith 244615a5570dSLisandro Dalcin #include <limits.h> 244715a5570dSLisandro Dalcin 244815a5570dSLisandro Dalcin /* The number of bits in a byte */ 244915a5570dSLisandro Dalcin 245015a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 245115a5570dSLisandro Dalcin 2452d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2453d382aafbSBarry Smith # include <sys/types.h> 2454d382aafbSBarry Smith #endif 2455d382aafbSBarry Smith 2456d382aafbSBarry Smith /*MC 2457d382aafbSBarry Smith 245866d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 245966d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 246066d79e26SBarry Smith 246166d79e26SBarry Smith 246266d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 246366d79e26SBarry Smith 246466d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 246566d79e26SBarry Smith 246666d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 246766d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 246866d79e26SBarry Smith 246966d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 247066d79e26SBarry Smith 247166d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 247266d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 247366d79e26SBarry Smith version number (x.y.z). 247466d79e26SBarry Smith 247566d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 247666d79e26SBarry Smith 247766d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 247866d79e26SBarry Smith 247966d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 248066d79e26SBarry Smith 248166d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 248266d79e26SBarry Smith 248366d79e26SBarry Smith Level: intermediate 248466d79e26SBarry Smith 248566d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 248666d79e26SBarry Smith 248766d79e26SBarry Smith M*/ 248866d79e26SBarry Smith 2489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 249527710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24965f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2497d382aafbSBarry Smith 24986a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24996a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 25006a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2502ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 250322ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2505f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 250660e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2507d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 25116c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 251217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 251317d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25155569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 251717df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 251939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2521745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 252239f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 25266c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 25276c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2528e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2529ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2530ce605777SToby Isaac 25314d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2532676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2533676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2534676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 25354d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2536676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2537676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2538676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2539676f2a66SJacob Faibussowitsch 2540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2542d382aafbSBarry Smith 254376bdecfbSBarry Smith /*J 2544d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2545d382aafbSBarry Smith 2546d382aafbSBarry Smith Level: beginner 2547d382aafbSBarry Smith 2548e28ce29aSPatrick Sanan Notes: 2549e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 255025ccb61fSToby Isaac with the option --download-sprng or --download-random123 2551d382aafbSBarry Smith 25528f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 255376bdecfbSBarry Smith J*/ 255419fd82e9SBarry Smith typedef const char* PetscRandomType; 2555d382aafbSBarry Smith #define PETSCRAND "rand" 2556d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2557d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2558c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 255925ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2560808ba619SStefano Zampini #define PETSCCURAND "curand" 2561d382aafbSBarry Smith 2562d382aafbSBarry Smith /* Logging support */ 2563014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2564d382aafbSBarry Smith 2565607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2566d382aafbSBarry Smith 2567d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2568140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2569d382aafbSBarry Smith 2570bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 257119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 257319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2574fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2576d382aafbSBarry Smith 2577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2580808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2581808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2585014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2586014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2588d382aafbSBarry Smith 2589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 259697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 25978a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 259897540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2599d382aafbSBarry Smith 260030815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 260130815ce0SLisandro Dalcin 26029860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 26039860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2604f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2605f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2613c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2614e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2615c891a504SStefano Zampini #endif 2616d382aafbSBarry Smith 2617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2620d382aafbSBarry Smith 2621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 26272a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2628d382aafbSBarry Smith 2629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2632014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2633014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2634cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2635cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2636d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2637d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2638d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2639d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 26406afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 26416afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26426afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26436afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26446afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2645d382aafbSBarry Smith 26466145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26476145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26486145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26496145cd65SJed Brown 2650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2651d382aafbSBarry Smith 2652ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2653ce94432eSBarry Smith 265445487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 265545487dadSJed Brown 2656d382aafbSBarry Smith struct _n_PetscSubcomm { 2657d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2658d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2659306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 266045487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 266145487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2662708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 266345487dadSJed Brown PetscSubcommType type; 2664e5acf8a4SHong Zhang char *subcommprefix; 2665d382aafbSBarry Smith }; 2666d382aafbSBarry Smith 2667c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2668306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 266936be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2670014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2671014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2672014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2673014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 267465d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2675053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2676f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2677e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2678a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2679a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2680a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2681d382aafbSBarry Smith 26829962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 26839962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 26849962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 26859962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 26869962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 26879962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 26889962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 26899962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 26909962606eSBarry Smith 26915e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 26925f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 26935f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26945f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26955f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 26965e71baefSBarry Smith 2697a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2698a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2699a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2700a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2701a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2702a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2703a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2704a32e93adSJunchao Zhang 270513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 27060f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 270713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2708137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2709137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2710137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 271113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 271213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 27130f453b92SJed Brown 27145e71baefSBarry Smith 2715471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2716471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2717471ecdacSJed Brown * possible. */ 27186a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2719d382aafbSBarry Smith 27209de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27219de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27229de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27239de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27249de0f6ecSBarry Smith 2725ace2fbaeSBarry Smith #include <stdarg.h> 2726ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2727ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2728ace2fbaeSBarry Smith 2729268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2730fbfcfee5SBarry Smith 27311f817a21SBarry Smith /*@C 27321f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 27331f817a21SBarry Smith 27341f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 27351f817a21SBarry Smith 27361f817a21SBarry Smith Input Parameters: 27371f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 27381f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 27391f817a21SBarry Smith 2740850545d0SSatish Balay Level: intermediate 2741850545d0SSatish Balay 2742f5f57ec0SBarry Smith Not available from Fortran 2743f5f57ec0SBarry Smith 27441f817a21SBarry Smith Options Database: 2745063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27461f817a21SBarry Smith @*/ 2747dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2748dff31646SBarry Smith { 2749dff31646SBarry Smith size_t len; 2750dff31646SBarry Smith char *vstring; 2751dff31646SBarry Smith PetscErrorCode ierr; 2752dff31646SBarry Smith 27531f817a21SBarry Smith PetscFunctionBegin; 27548d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2755dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 275635005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2757580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2758dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27591f817a21SBarry Smith PetscFunctionReturn(0); 2760dff31646SBarry Smith } 2761dff31646SBarry Smith 2762b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2763fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2764fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2765f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2766fe278a28SBarry Smith 2767f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2768f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2769b967cddfSBarry Smith 27709f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27719f4d3c52SBarry Smith 277204102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2773763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2774dff31646SBarry Smith 277568e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27765dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2777d382aafbSBarry Smith 2778b2566f29SBarry Smith 2779b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2780503e1a2cSLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscStrHash(const char *str) 2781df05ca09SBarry Smith { 2782df05ca09SBarry Smith unsigned int c,hash = 5381; 2783df05ca09SBarry Smith 2784503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2785df05ca09SBarry Smith return hash; 2786df05ca09SBarry Smith } 278777a5e07dSBarry Smith 278877a5e07dSBarry Smith /*MC 278977a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 279077a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 279177a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 279277a5e07dSBarry Smith 2793d083f849SBarry Smith Collective 279477a5e07dSBarry Smith 279577a5e07dSBarry Smith Synopsis: 279677a5e07dSBarry Smith #include <petscsys.h> 279777a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 279877a5e07dSBarry Smith 279977a5e07dSBarry Smith Input Parameters: 2800df05ca09SBarry Smith + a - pointer to the input data to be reduced 2801df05ca09SBarry Smith . c - the number of MPI data items in a and b 2802df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2803df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2804df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 280577a5e07dSBarry Smith 280677a5e07dSBarry Smith Output Parameter: 2807df05ca09SBarry Smith . b - the reduced values 280877a5e07dSBarry Smith 2809e28ce29aSPatrick Sanan Notes: 2810e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 281177a5e07dSBarry Smith 2812df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2813df05ca09SBarry Smith 2814df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2815df05ca09SBarry Smith 281677a5e07dSBarry Smith Level: developer 281777a5e07dSBarry Smith 281877a5e07dSBarry Smith .seealso: MPI_Allreduce() 281977a5e07dSBarry Smith M*/ 2820df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do {\ 2821df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2822df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6];\ 2823df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2824df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2825df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2826df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 2827df05ca09SBarry Smith if (-a_b2[0] != a_b2[1]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 2828df05ca09SBarry Smith if (-a_b2[2] != a_b2[3]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 2829df05ca09SBarry Smith if (-a_b2[4] != a_b2[5]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",c);\ 2830df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2831df05ca09SBarry Smith } while (0) 2832b2566f29SBarry Smith #else 2833df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2834b2566f29SBarry Smith #endif 2835b2566f29SBarry Smith 2836b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 28378198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 28388198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 28392f065d89SBarry Smith #endif 28408198064fSBarry Smith 284112801b39SBarry Smith /* 284260fbe2beSVaclav Hapla List of external packages and queries on it 284360fbe2beSVaclav Hapla */ 284460fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 284560fbe2beSVaclav Hapla 2846d382aafbSBarry Smith #endif 2847