1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 112981ebdbSBarry Smith in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/ 122981ebdbSBarry Smith does not exist and petscconf.h is in the same directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith #endif 25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith #define _BSD_SOURCE 2773fca5a0SBarry Smith #endif 28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 29ea0fecefSShri Abhyankar #define _GNU_SOURCE 30ea0fecefSShri Abhyankar #endif 3173fca5a0SBarry Smith #endif 3273fca5a0SBarry Smith 33d382aafbSBarry Smith /* ========================================================================== */ 34d382aafbSBarry Smith /* 352c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 36d382aafbSBarry Smith */ 371ec50b02SJed Brown #if defined(__cplusplus) 381ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 391ec50b02SJed Brown #else 401ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 411ec50b02SJed Brown #endif 42d382aafbSBarry Smith 43ed938b00SJed Brown #if defined(__cplusplus) 44ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 45ed938b00SJed Brown #else 46ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 47ed938b00SJed Brown #endif 48ed938b00SJed Brown 49ed938b00SJed Brown #if defined(__cplusplus) 50ed938b00SJed Brown # define PETSC_STATIC_INLINE PETSC_CXX_STATIC_INLINE 51ed938b00SJed Brown #else 52ed938b00SJed Brown # define PETSC_STATIC_INLINE PETSC_C_STATIC_INLINE 53ed938b00SJed Brown #endif 54ed938b00SJed Brown 55ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 56014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 57014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 5821f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 59014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY) 60014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 61014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 6221f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 63d382aafbSBarry Smith #else 64014dd563SJed Brown # define PETSC_DLLEXPORT 65014dd563SJed Brown # define PETSC_DLLIMPORT 6621f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 67014dd563SJed Brown #endif 68014dd563SJed Brown 69014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 70014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 71014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 72014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 73014dd563SJed Brown #endif 74014dd563SJed Brown 752c280183SJed Brown #if defined(__cplusplus) 76014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 77638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C" 7821f66b81SJed Brown #define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 79014dd563SJed Brown #else 80014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 81638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF 826258c452SJed Brown #define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 83d382aafbSBarry Smith #endif 8427710113SBarry Smith 852c8e378dSBarry Smith #include <petscversion.h> 86301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 87d382aafbSBarry Smith 88d382aafbSBarry Smith /* ========================================================================== */ 89d382aafbSBarry Smith 90d382aafbSBarry Smith /* 91d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 92d382aafbSBarry Smith 93d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 94d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 95d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 96d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 97d382aafbSBarry Smith mpicxx.h directly in their code 98d382aafbSBarry Smith */ 99fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 100d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 101fa9e63e2SJed Brown #endif 102fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 103d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 104fa9e63e2SJed Brown #endif 1052c8e378dSBarry Smith #include <mpi.h> 10665013866SBarry Smith 107d382aafbSBarry Smith /* 1082981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 109d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 110d382aafbSBarry Smith */ 111d382aafbSBarry Smith #include <stdio.h> 112d382aafbSBarry Smith 113d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 114d382aafbSBarry Smith #if !defined(MPIAPI) 115d382aafbSBarry Smith #define MPIAPI 116d382aafbSBarry Smith #endif 117d382aafbSBarry Smith 118894dd566SJed Brown /* Support for Clang (>=3.2) matching type tag arguments with void* buffer types */ 119894dd566SJed Brown #if defined(__has_attribute) 120894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 121894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1228ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1238ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 124894dd566SJed Brown # endif 125894dd566SJed Brown #endif 126894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 127894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 1288ad47952SJed Brown # define PetscAttrMPITypeTag(type) 1298ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 130894dd566SJed Brown #endif 131b3506946SBarry Smith 132d382aafbSBarry Smith /*MC 1331957e957SBarry Smith PetscErrorCode - datatype used for return error code from almost all PETSc functions 134d382aafbSBarry Smith 135d382aafbSBarry Smith Level: beginner 136d382aafbSBarry Smith 137d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 138d382aafbSBarry Smith M*/ 139d382aafbSBarry Smith typedef int PetscErrorCode; 140d382aafbSBarry Smith 141d382aafbSBarry Smith /*MC 142d382aafbSBarry Smith 143503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 144d382aafbSBarry Smith 1451957e957SBarry Smith Notes: Use PetscClassIdRegister() to obtain a new value for a new class being created. Usually 1461957e957SBarry Smith XXXInitializePackage() calls it for each class it defines. 1471957e957SBarry Smith 1481957e957SBarry Smith Developer Notes: Internal integer stored in the _p_PetscObject data structure. 1491957e957SBarry Smith These are all computed by an offset from the lowest one, PETSC_SMALLEST_CLASSID. 1501957e957SBarry Smith 1511957e957SBarry Smith Level: developer 152d382aafbSBarry Smith 1530700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 154d382aafbSBarry Smith M*/ 1550700a824SBarry Smith typedef int PetscClassId; 156d382aafbSBarry Smith 157d382aafbSBarry Smith 158d382aafbSBarry Smith /*MC 159d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 160d382aafbSBarry Smith 161d382aafbSBarry Smith Level: intermediate 162d382aafbSBarry Smith 163d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 1643b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 165d382aafbSBarry Smith 1664dc2109aSBarry Smith PetscMPIIntCast(a,&b) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 1672981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error. 168d382aafbSBarry Smith 169d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 170d382aafbSBarry Smith 171d382aafbSBarry Smith M*/ 172d382aafbSBarry Smith typedef int PetscMPIInt; 173d382aafbSBarry Smith 174d382aafbSBarry Smith /*MC 175d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 176d382aafbSBarry Smith 177d382aafbSBarry Smith Level: intermediate 178d382aafbSBarry Smith 179d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 180d382aafbSBarry Smith M*/ 181d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 1825a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 183d382aafbSBarry Smith 184fab38c73SJed Brown #if defined(PETSC_HAVE_STDINT_H) 185fab38c73SJed Brown #include <stdint.h> 186fab38c73SJed Brown #endif 187fab38c73SJed Brown 188d382aafbSBarry Smith /*MC 189d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 1903b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 191d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 192d382aafbSBarry Smith 193d382aafbSBarry Smith Level: intermediate 194d382aafbSBarry Smith 195d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 196d382aafbSBarry Smith M*/ 197fab38c73SJed Brown #if defined(PETSC_HAVE_STDINT_H) 198fab38c73SJed Brown typedef int64_t Petsc64bitInt; 199fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 200f505b413SSatish Balay typedef long long Petsc64bitInt; 201f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 202236ed0a3SSatish Balay typedef __int64 Petsc64bitInt; 203236ed0a3SSatish Balay #else 204f505b413SSatish Balay typedef unknown64bit Petsc64bitInt 205236ed0a3SSatish Balay #endif 206d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 207236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt; 20841860013SJed Brown # if defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 209fab38c73SJed Brown # define MPIU_INT MPI_INT64_T 210fab38c73SJed Brown # else 211d382aafbSBarry Smith # define MPIU_INT MPI_LONG_LONG_INT 212fab38c73SJed Brown # endif 213d382aafbSBarry Smith #else 214d382aafbSBarry Smith typedef int PetscInt; 215d382aafbSBarry Smith #define MPIU_INT MPI_INT 216d382aafbSBarry Smith #endif 217e56f5c9eSBarry Smith #if defined(PETSC_HAVE_MPI_INT64_T) 218e56f5c9eSBarry Smith # define MPIU_INT64 MPI_INT64_T 219e56f5c9eSBarry Smith #else 220e56f5c9eSBarry Smith # define MPIU_INT64 MPI_LONG_LONG_INT 221e56f5c9eSBarry Smith #endif 222236ed0a3SSatish Balay 223d382aafbSBarry Smith 224702bc34aSSatish Balay /*MC 225702bc34aSSatish Balay PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 226702bc34aSSatish Balay 227702bc34aSSatish Balay Level: intermediate 228702bc34aSSatish Balay 229702bc34aSSatish Balay Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 230702bc34aSSatish Balay standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 231702bc34aSSatish Balay (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below). 232702bc34aSSatish Balay 233c5df96a5SBarry Smith PetscErrorCode PetscBLASIntCast(a,&b) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2342981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error 235702bc34aSSatish Balay 2362981ebdbSBarry Smith Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc, 237702bc34aSSatish Balay if you run ./configure with the option 238702bc34aSSatish Balay --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib] 2392981ebdbSBarry Smith but you need to also use --known-64-bit-blas-indices. 2402981ebdbSBarry Smith 2412981ebdbSBarry Smith MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices 2422981ebdbSBarry Smith 2432981ebdbSBarry Smith Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK. 244702bc34aSSatish Balay 245702bc34aSSatish Balay External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot 246702bc34aSSatish Balay be used with PETSc if you have set PetscBLASInt to long int. 247702bc34aSSatish Balay 248702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt 249702bc34aSSatish Balay 250702bc34aSSatish Balay M*/ 251702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES) 252702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt; 253702bc34aSSatish Balay #else 254702bc34aSSatish Balay typedef int PetscBLASInt; 255702bc34aSSatish Balay #endif 256702bc34aSSatish Balay 25758b60935SBarry Smith /*EC 25858b60935SBarry Smith 2592981ebdbSBarry Smith PetscPrecision - indicates what precision the object is using. This is currently not used. 26058b60935SBarry Smith 26158b60935SBarry Smith Level: advanced 26258b60935SBarry Smith 26358b60935SBarry Smith .seealso: PetscObjectSetPrecision() 26458b60935SBarry Smith E*/ 26558b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision; 266014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[]; 26758b60935SBarry Smith 268503cfb0cSBarry Smith /* 269503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 270503cfb0cSBarry Smith */ 271d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 272adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED 273d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 274adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG 275d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 276adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG 277d382aafbSBarry Smith #else 278d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 279d382aafbSBarry Smith #endif 280d382aafbSBarry Smith 281d382aafbSBarry Smith 282d382aafbSBarry Smith /* 283d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 284d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 285d382aafbSBarry Smith */ 286014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 287d382aafbSBarry Smith 288d382aafbSBarry Smith /* 289d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 290d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 291d382aafbSBarry Smith */ 292014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 293d382aafbSBarry Smith 294d382aafbSBarry Smith /*MC 295d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 296d382aafbSBarry Smith 297d382aafbSBarry Smith Synopsis: 298aaa7dc30SBarry Smith #include <petscsys.h> 299ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 300d382aafbSBarry Smith 301eca87e8dSBarry Smith Not Collective 302eca87e8dSBarry Smith 303d382aafbSBarry Smith Input Parameters: 304d382aafbSBarry Smith . cond - condition or expression 305d382aafbSBarry Smith 306d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 307d382aafbSBarry Smith branch is unlikely. 308d382aafbSBarry Smith 309d382aafbSBarry Smith Level: advanced 310d382aafbSBarry Smith 311d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 312d382aafbSBarry Smith M*/ 313d382aafbSBarry Smith 314d382aafbSBarry Smith /*MC 315d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 316d382aafbSBarry Smith 317d382aafbSBarry Smith Synopsis: 318aaa7dc30SBarry Smith #include <petscsys.h> 319ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 320d382aafbSBarry Smith 321eca87e8dSBarry Smith Not Collective 322eca87e8dSBarry Smith 323d382aafbSBarry Smith Input Parameters: 324d382aafbSBarry Smith . cond - condition or expression 325d382aafbSBarry Smith 326d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 327d382aafbSBarry Smith branch is likely. 328d382aafbSBarry Smith 329d382aafbSBarry Smith Level: advanced 330d382aafbSBarry Smith 331d382aafbSBarry Smith .seealso: PetscUnlikely() 332d382aafbSBarry Smith M*/ 333d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 334d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 335d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 336d382aafbSBarry Smith #else 337cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 338cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 339d382aafbSBarry Smith #endif 340d382aafbSBarry Smith 341d382aafbSBarry Smith /* 342d382aafbSBarry Smith Declare extern C stuff after including external header files 343d382aafbSBarry Smith */ 344d382aafbSBarry Smith 345d382aafbSBarry Smith 346d382aafbSBarry Smith /* 347d382aafbSBarry Smith Basic PETSc constants 348d382aafbSBarry Smith */ 349d382aafbSBarry Smith 350d382aafbSBarry Smith /*E 351ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 352d382aafbSBarry Smith 353d382aafbSBarry Smith Level: beginner 354d382aafbSBarry Smith 355ace3abfcSBarry Smith Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 35634e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 35734e82e7dSBarry Smith 358d382aafbSBarry Smith E*/ 359ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 3606a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 3615a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 36270b3c8c7SBarry Smith 3638b49ba18SBarry Smith /* 3648b49ba18SBarry Smith Defines some elementary mathematics functions and constants. 3658b49ba18SBarry Smith */ 3668b49ba18SBarry Smith #include <petscmath.h> 3678b49ba18SBarry Smith 36870b3c8c7SBarry Smith /*E 36970b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 37070b3c8c7SBarry Smith 37170b3c8c7SBarry Smith Level: beginner 37270b3c8c7SBarry Smith 37370b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 37470b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 37570b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 37670b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 37770b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 37870b3c8c7SBarry Smith 37970b3c8c7SBarry Smith E*/ 38070b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 3816a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 382d382aafbSBarry Smith 383d382aafbSBarry Smith /*MC 384ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 385d382aafbSBarry Smith 386d382aafbSBarry Smith Level: beginner 387d382aafbSBarry Smith 388d382aafbSBarry Smith Note: Zero integer 389d382aafbSBarry Smith 390ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE 391d382aafbSBarry Smith M*/ 392d382aafbSBarry Smith 393d382aafbSBarry Smith /*MC 394ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 395d382aafbSBarry Smith 396d382aafbSBarry Smith Level: beginner 397d382aafbSBarry Smith 398d382aafbSBarry Smith Note: Nonzero integer 399d382aafbSBarry Smith 400ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE 401d382aafbSBarry Smith M*/ 402d382aafbSBarry Smith 403d382aafbSBarry Smith /*MC 4040298fd71SBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer. This is deprecated in C/C++ simply use NULL 405d382aafbSBarry Smith 406d382aafbSBarry Smith Level: beginner 407d382aafbSBarry Smith 408d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 409d382aafbSBarry Smith some default 410d382aafbSBarry Smith 411d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 412503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 413d382aafbSBarry Smith 414d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 415d382aafbSBarry Smith 416d382aafbSBarry Smith M*/ 4173bcbec90SJed Brown #define PETSC_NULL NULL 418d382aafbSBarry Smith 419d382aafbSBarry Smith /*MC 4200298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 421d382aafbSBarry Smith 422d382aafbSBarry Smith Level: beginner 423d382aafbSBarry Smith 424d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 425d382aafbSBarry Smith some default 426d382aafbSBarry Smith 427d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 428d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 429d382aafbSBarry Smith 430d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 431d382aafbSBarry Smith 432d382aafbSBarry Smith M*/ 4330298fd71SBarry Smith #define PETSC_IGNORE NULL 434d382aafbSBarry Smith 435d382aafbSBarry Smith /*MC 436557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 437557d4da8SBarry Smith where you wish PETSc to use the default. 438557d4da8SBarry Smith 439557d4da8SBarry Smith Level: beginner 440557d4da8SBarry Smith 441557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 442557d4da8SBarry Smith 443557d4da8SBarry Smith M*/ 444557d4da8SBarry Smith #define PETSC_DECIDE -1 445557d4da8SBarry Smith 446557d4da8SBarry Smith /*MC 447d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 448d382aafbSBarry Smith where you wish PETSc to compute the required value. 449d382aafbSBarry Smith 450d382aafbSBarry Smith Level: beginner 451d382aafbSBarry Smith 452557d4da8SBarry Smith 453557d4da8SBarry Smith Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 454557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 455557d4da8SBarry Smith 4560298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 459d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 460d382aafbSBarry Smith 461d382aafbSBarry Smith /*MC 462557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 463557d4da8SBarry Smith where you wish PETSc to use the default. 464557d4da8SBarry Smith 465557d4da8SBarry Smith Level: beginner 466557d4da8SBarry Smith 4672d80014bSBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 468557d4da8SBarry Smith 4690298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 470557d4da8SBarry Smith 471557d4da8SBarry Smith M*/ 472557d4da8SBarry Smith #define PETSC_DEFAULT -2 473557d4da8SBarry Smith 474557d4da8SBarry Smith /*MC 475d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 476d382aafbSBarry Smith all the processs that PETSc knows about. 477d382aafbSBarry Smith 478d382aafbSBarry Smith Level: beginner 479d382aafbSBarry Smith 480d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 481d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 482d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 483d382aafbSBarry Smith PetscInitialize() 484d382aafbSBarry Smith 485d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 486d382aafbSBarry Smith 487d382aafbSBarry Smith M*/ 488014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 489d382aafbSBarry Smith 490d382aafbSBarry Smith /*MC 491503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 492d382aafbSBarry Smith 493d382aafbSBarry Smith Level: beginner 494d382aafbSBarry Smith 495d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 496d382aafbSBarry Smith 497d382aafbSBarry Smith M*/ 498d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 499d382aafbSBarry Smith 500d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 501014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 502014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 503014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize; 5044cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 505d382aafbSBarry Smith 506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 509d382aafbSBarry Smith 510d382aafbSBarry Smith /*MC 511d382aafbSBarry Smith PetscMalloc - Allocates memory 512d382aafbSBarry Smith 513eca87e8dSBarry Smith Synopsis: 514aaa7dc30SBarry Smith #include <petscsys.h> 515eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 516eca87e8dSBarry Smith 517eca87e8dSBarry Smith Not Collective 518eca87e8dSBarry Smith 519d382aafbSBarry Smith Input Parameter: 520d382aafbSBarry Smith . m - number of bytes to allocate 521d382aafbSBarry Smith 522d382aafbSBarry Smith Output Parameter: 523d382aafbSBarry Smith . result - memory allocated 524d382aafbSBarry Smith 525d382aafbSBarry Smith Level: beginner 526d382aafbSBarry Smith 52749d7da52SJed Brown Notes: 52849d7da52SJed Brown Memory is always allocated at least double aligned 529d382aafbSBarry Smith 53049d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 531d382aafbSBarry Smith 532d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 533d382aafbSBarry Smith 534d382aafbSBarry Smith Concepts: memory allocation 535d382aafbSBarry Smith 536d382aafbSBarry Smith M*/ 53749d7da52SJed Brown #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 538d382aafbSBarry Smith 539d382aafbSBarry Smith /*MC 540503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 541d382aafbSBarry Smith 542d382aafbSBarry Smith Synopsis: 543aaa7dc30SBarry Smith #include <petscsys.h> 544d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 545d382aafbSBarry Smith 546eca87e8dSBarry Smith Not Collective 547eca87e8dSBarry Smith 548eca87e8dSBarry Smith Input Parameters: 549eca87e8dSBarry Smith . addr - address to align (any pointer type) 550eca87e8dSBarry Smith 551d382aafbSBarry Smith Level: developer 552d382aafbSBarry Smith 553d382aafbSBarry Smith .seealso: PetscMallocAlign() 554d382aafbSBarry Smith 555d382aafbSBarry Smith Concepts: memory allocation 556d382aafbSBarry Smith M*/ 557d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 558d382aafbSBarry Smith 559d382aafbSBarry Smith /*MC 560785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 561d382aafbSBarry Smith 562eca87e8dSBarry Smith Synopsis: 563aaa7dc30SBarry Smith #include <petscsys.h> 564785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 565785e854fSJed Brown 566785e854fSJed Brown Not Collective 567785e854fSJed Brown 568785e854fSJed Brown Input Parameter: 569785e854fSJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 570785e854fSJed Brown 571785e854fSJed Brown Output Parameter: 572785e854fSJed Brown . r1 - memory allocated in first chunk 573785e854fSJed Brown 574785e854fSJed Brown Level: developer 575785e854fSJed Brown 5761795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 577785e854fSJed Brown 578785e854fSJed Brown Concepts: memory allocation 579785e854fSJed Brown 580785e854fSJed Brown M*/ 581e1287589SMatthew G. Knepley #define PetscMalloc1(m1,r1) ((m1) ? PetscMalloc((m1)*sizeof(**(r1)),r1) : (*(r1) = 0,0)) 582785e854fSJed Brown 583785e854fSJed Brown /*MC 5841795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 5851795a4d1SJed Brown 5861795a4d1SJed Brown Synopsis: 587aaa7dc30SBarry Smith #include <petscsys.h> 5881795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 5891795a4d1SJed Brown 5901795a4d1SJed Brown Not Collective 5911795a4d1SJed Brown 5921795a4d1SJed Brown Input Parameter: 5931795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5941795a4d1SJed Brown 5951795a4d1SJed Brown Output Parameter: 5961795a4d1SJed Brown . r1 - memory allocated in first chunk 5971795a4d1SJed Brown 5981795a4d1SJed Brown Level: developer 5991795a4d1SJed Brown 6001795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6011795a4d1SJed Brown 6021795a4d1SJed Brown Concepts: memory allocation 6031795a4d1SJed Brown 6041795a4d1SJed Brown M*/ 6051795a4d1SJed Brown #define PetscCalloc1(m1,r1) (PetscMalloc1((m1),r1) || PetscMemzero(*(r1),(m1)*sizeof(**(r1)))) 6061795a4d1SJed Brown 6071795a4d1SJed Brown /*MC 608dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 609d382aafbSBarry Smith 610eca87e8dSBarry Smith Synopsis: 611aaa7dc30SBarry Smith #include <petscsys.h> 612dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 613eca87e8dSBarry Smith 614eca87e8dSBarry Smith Not Collective 615eca87e8dSBarry Smith 616d382aafbSBarry Smith Input Parameter: 617d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 618dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 619d382aafbSBarry Smith 620d382aafbSBarry Smith Output Parameter: 621d382aafbSBarry Smith + r1 - memory allocated in first chunk 622d382aafbSBarry Smith - r2 - memory allocated in second chunk 623d382aafbSBarry Smith 624d382aafbSBarry Smith Level: developer 625d382aafbSBarry Smith 6261795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 627d382aafbSBarry Smith 628d382aafbSBarry Smith Concepts: memory allocation 629d382aafbSBarry Smith 630d382aafbSBarry Smith M*/ 63120a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 6321d2f33c5SMatthew G. Knepley #define PetscMalloc2(m1,r1,m2,r2) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2))) 633d382aafbSBarry Smith #else 634ceba6b73SMatthew G. Knepley #define PetscMalloc2(m1,r1,m2,r2) ((((m1)+(m2)) ? (*(r2) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(PETSC_MEMALIGN-1),r1)) : 0) \ 635ceba6b73SMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),0) \ 6363589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0)) 637d382aafbSBarry Smith #endif 638d382aafbSBarry Smith 639d382aafbSBarry Smith /*MC 6401795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 641d382aafbSBarry Smith 642eca87e8dSBarry Smith Synopsis: 643aaa7dc30SBarry Smith #include <petscsys.h> 6441795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 645eca87e8dSBarry Smith 646eca87e8dSBarry Smith Not Collective 647eca87e8dSBarry Smith 648d382aafbSBarry Smith Input Parameter: 649d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 6501795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 6511795a4d1SJed Brown 6521795a4d1SJed Brown Output Parameter: 6531795a4d1SJed Brown + r1 - memory allocated in first chunk 6541795a4d1SJed Brown - r2 - memory allocated in second chunk 6551795a4d1SJed Brown 6561795a4d1SJed Brown Level: developer 6571795a4d1SJed Brown 6581795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 6591795a4d1SJed Brown 6601795a4d1SJed Brown Concepts: memory allocation 6611795a4d1SJed Brown M*/ 6621795a4d1SJed Brown #define PetscCalloc2(m1,r1,m2,r2) (PetscMalloc2((m1),(r1),(m2),(r2)) || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2)))) 6631795a4d1SJed Brown 6641795a4d1SJed Brown /*MC 665dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 666d382aafbSBarry Smith 667d382aafbSBarry Smith Synopsis: 668aaa7dc30SBarry Smith #include <petscsys.h> 669dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 670d382aafbSBarry Smith 671d382aafbSBarry Smith Not Collective 672d382aafbSBarry Smith 673d382aafbSBarry Smith Input Parameter: 674d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 675d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 676dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 677d382aafbSBarry Smith 678d382aafbSBarry Smith Output Parameter: 679d382aafbSBarry Smith + r1 - memory allocated in first chunk 680d382aafbSBarry Smith . r2 - memory allocated in second chunk 681d382aafbSBarry Smith - r3 - memory allocated in third chunk 682d382aafbSBarry Smith 683d382aafbSBarry Smith Level: developer 684d382aafbSBarry Smith 6851795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 686d382aafbSBarry Smith 687d382aafbSBarry Smith Concepts: memory allocation 688d382aafbSBarry Smith 689d382aafbSBarry Smith M*/ 69020a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 6911d2f33c5SMatthew G. Knepley #define PetscMalloc3(m1,r1,m2,r2,m3,r3) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3))) 692d382aafbSBarry Smith #else 693ceba6b73SMatthew G. Knepley #define PetscMalloc3(m1,r1,m2,r2,m3,r3) ((((m1)+(m2)+(m3)) ? (*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+2*(PETSC_MEMALIGN-1),r1)) : 0) \ 694278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),0) \ 6953589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0)) 696d382aafbSBarry Smith #endif 697d382aafbSBarry Smith 698d382aafbSBarry Smith /*MC 6991795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 700d382aafbSBarry Smith 701eca87e8dSBarry Smith Synopsis: 702aaa7dc30SBarry Smith #include <petscsys.h> 7031795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 704eca87e8dSBarry Smith 705eca87e8dSBarry Smith Not Collective 706eca87e8dSBarry Smith 707d382aafbSBarry Smith Input Parameter: 708d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 709d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7101795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7111795a4d1SJed Brown 7121795a4d1SJed Brown Output Parameter: 7131795a4d1SJed Brown + r1 - memory allocated in first chunk 7141795a4d1SJed Brown . r2 - memory allocated in second chunk 7151795a4d1SJed Brown - r3 - memory allocated in third chunk 7161795a4d1SJed Brown 7171795a4d1SJed Brown Level: developer 7181795a4d1SJed Brown 7191795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7201795a4d1SJed Brown 7211795a4d1SJed Brown Concepts: memory allocation 7221795a4d1SJed Brown M*/ 7231795a4d1SJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) \ 7241795a4d1SJed Brown (PetscMalloc3((m1),(r1),(m2),(r2),(m3),(r3)) \ 7251795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3)))) 7261795a4d1SJed Brown 7271795a4d1SJed Brown /*MC 728dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 729d382aafbSBarry Smith 730d382aafbSBarry Smith Synopsis: 731aaa7dc30SBarry Smith #include <petscsys.h> 732dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 733d382aafbSBarry Smith 734d382aafbSBarry Smith Not Collective 735d382aafbSBarry Smith 736d382aafbSBarry Smith Input Parameter: 737d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 738d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 739d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 740dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 741d382aafbSBarry Smith 742d382aafbSBarry Smith Output Parameter: 743d382aafbSBarry Smith + r1 - memory allocated in first chunk 744d382aafbSBarry Smith . r2 - memory allocated in second chunk 745d382aafbSBarry Smith . r3 - memory allocated in third chunk 746d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 747d382aafbSBarry Smith 748d382aafbSBarry Smith Level: developer 749d382aafbSBarry Smith 7501795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 751d382aafbSBarry Smith 752d382aafbSBarry Smith Concepts: memory allocation 753d382aafbSBarry Smith 754d382aafbSBarry Smith M*/ 75520a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 7561d2f33c5SMatthew G. Knepley #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4))) 757d382aafbSBarry Smith #else 758dcca6d9dSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \ 759ceba6b73SMatthew G. Knepley ((((m1)+(m2)+(m3)+(m4)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+3*(PETSC_MEMALIGN-1),r1)) : 0) \ 760278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),0) \ 7613589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0) || (!(m4) ? (*(r4) = 0,0) : 0)) 762d382aafbSBarry Smith #endif 763d382aafbSBarry Smith 764d382aafbSBarry Smith /*MC 7651795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 766d382aafbSBarry Smith 767eca87e8dSBarry Smith Synopsis: 768aaa7dc30SBarry Smith #include <petscsys.h> 7691795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 770eca87e8dSBarry Smith 771eca87e8dSBarry Smith Not Collective 772eca87e8dSBarry Smith 773d382aafbSBarry Smith Input Parameter: 774d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 775d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 776d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 7771795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 7781795a4d1SJed Brown 7791795a4d1SJed Brown Output Parameter: 7801795a4d1SJed Brown + r1 - memory allocated in first chunk 7811795a4d1SJed Brown . r2 - memory allocated in second chunk 7821795a4d1SJed Brown . r3 - memory allocated in third chunk 7831795a4d1SJed Brown - r4 - memory allocated in fourth chunk 7841795a4d1SJed Brown 7851795a4d1SJed Brown Level: developer 7861795a4d1SJed Brown 7871795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 7881795a4d1SJed Brown 7891795a4d1SJed Brown Concepts: memory allocation 7901795a4d1SJed Brown 7911795a4d1SJed Brown M*/ 7921795a4d1SJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \ 7931795a4d1SJed Brown (PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \ 7941795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \ 7951795a4d1SJed Brown || PetscMemzero(*(r4),(m4)*sizeof(**(r4)))) 7961795a4d1SJed Brown 7971795a4d1SJed Brown /*MC 798dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 799d382aafbSBarry Smith 800d382aafbSBarry Smith Synopsis: 801aaa7dc30SBarry Smith #include <petscsys.h> 802dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 803d382aafbSBarry Smith 804d382aafbSBarry Smith Not Collective 805d382aafbSBarry Smith 806d382aafbSBarry Smith Input Parameter: 807d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 808d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 809d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 810d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 811dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 812d382aafbSBarry Smith 813d382aafbSBarry Smith Output Parameter: 814d382aafbSBarry Smith + r1 - memory allocated in first chunk 815d382aafbSBarry Smith . r2 - memory allocated in second chunk 816d382aafbSBarry Smith . r3 - memory allocated in third chunk 817d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 818d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 819d382aafbSBarry Smith 820d382aafbSBarry Smith Level: developer 821d382aafbSBarry Smith 8221795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 823d382aafbSBarry Smith 824d382aafbSBarry Smith Concepts: memory allocation 825d382aafbSBarry Smith 826d382aafbSBarry Smith M*/ 82720a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 8281d2f33c5SMatthew G. Knepley #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5))) 829d382aafbSBarry Smith #else 830dcca6d9dSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \ 831ceba6b73SMatthew G. Knepley ((((m1)+(m2)+(m3)+(m4)+(m5)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+4*(PETSC_MEMALIGN-1),r1)) : 0) \ 832278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),0) \ 8333589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0) || (!(m4) ? (*(r4) = 0,0) : 0) || (!(m5) ? (*(r5) = 0,0) : 0)) 834d382aafbSBarry Smith #endif 835d382aafbSBarry Smith 836d382aafbSBarry Smith /*MC 8371795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 838d382aafbSBarry Smith 839eca87e8dSBarry Smith Synopsis: 840aaa7dc30SBarry Smith #include <petscsys.h> 8411795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 842eca87e8dSBarry Smith 843eca87e8dSBarry Smith Not Collective 844eca87e8dSBarry Smith 845d382aafbSBarry Smith Input Parameter: 846d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 847d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 848d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 849d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 8501795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 8511795a4d1SJed Brown 8521795a4d1SJed Brown Output Parameter: 8531795a4d1SJed Brown + r1 - memory allocated in first chunk 8541795a4d1SJed Brown . r2 - memory allocated in second chunk 8551795a4d1SJed Brown . r3 - memory allocated in third chunk 8561795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8571795a4d1SJed Brown - r5 - memory allocated in fifth chunk 8581795a4d1SJed Brown 8591795a4d1SJed Brown Level: developer 8601795a4d1SJed Brown 8611795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 8621795a4d1SJed Brown 8631795a4d1SJed Brown Concepts: memory allocation 8641795a4d1SJed Brown 8651795a4d1SJed Brown M*/ 8661795a4d1SJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \ 8671795a4d1SJed Brown (PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \ 8681795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \ 8691795a4d1SJed Brown || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5)))) 870d382aafbSBarry Smith 871d382aafbSBarry Smith /*MC 872dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 873d382aafbSBarry Smith 874d382aafbSBarry Smith Synopsis: 875aaa7dc30SBarry Smith #include <petscsys.h> 876dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 877d382aafbSBarry Smith 878d382aafbSBarry Smith Not Collective 879d382aafbSBarry Smith 880d382aafbSBarry Smith Input Parameter: 881d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 882d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 883d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 884d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 885d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 886dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 887d382aafbSBarry Smith 888d382aafbSBarry Smith Output Parameter: 889d382aafbSBarry Smith + r1 - memory allocated in first chunk 890d382aafbSBarry Smith . r2 - memory allocated in second chunk 891d382aafbSBarry Smith . r3 - memory allocated in third chunk 892d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 893d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 894d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 895d382aafbSBarry Smith 896d382aafbSBarry Smith Level: developer 897d382aafbSBarry Smith 8981795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 899d382aafbSBarry Smith 900d382aafbSBarry Smith Concepts: memory allocation 901d382aafbSBarry Smith 902d382aafbSBarry Smith M*/ 90320a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 9041d2f33c5SMatthew G. Knepley #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5)) || PetscMalloc1((m6),(r6))) 905d382aafbSBarry Smith #else 906dcca6d9dSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \ 907ceba6b73SMatthew G. Knepley ((((m1)+(m2)+(m3)+(m4)+(m5)+(m6)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+(m6)*sizeof(**(r6))+5*(PETSC_MEMALIGN-1),r1)) : 0) \ 908278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),*(void**)(r6) = PetscAddrAlign(*(r5)+(m5)),0) \ 9093589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0) || (!(m4) ? (*(r4) = 0,0) : 0) || (!(m5) ? (*(r5) = 0,0) : 0) || (!(m6) ? (*(r6) = 0,0) : 0)) 910d382aafbSBarry Smith #endif 911d382aafbSBarry Smith 912d382aafbSBarry Smith /*MC 9131795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 914d382aafbSBarry Smith 915eca87e8dSBarry Smith Synopsis: 916aaa7dc30SBarry Smith #include <petscsys.h> 9171795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 918eca87e8dSBarry Smith 919eca87e8dSBarry Smith Not Collective 920eca87e8dSBarry Smith 921d382aafbSBarry Smith Input Parameter: 922d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 923d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 924d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 925d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 926d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9271795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9281795a4d1SJed Brown 9291795a4d1SJed Brown Output Parameter: 9301795a4d1SJed Brown + r1 - memory allocated in first chunk 9311795a4d1SJed Brown . r2 - memory allocated in second chunk 9321795a4d1SJed Brown . r3 - memory allocated in third chunk 9331795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9341795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9351795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9361795a4d1SJed Brown 9371795a4d1SJed Brown Level: developer 9381795a4d1SJed Brown 9391795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9401795a4d1SJed Brown 9411795a4d1SJed Brown Concepts: memory allocation 9421795a4d1SJed Brown M*/ 9431795a4d1SJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \ 9441795a4d1SJed Brown (PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \ 9451795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \ 9461795a4d1SJed Brown || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5))) || PetscMemzero(*(r6),(m6)*sizeof(**(r6)))) 9471795a4d1SJed Brown 9481795a4d1SJed Brown /*MC 949dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 950d382aafbSBarry Smith 951d382aafbSBarry Smith Synopsis: 952aaa7dc30SBarry Smith #include <petscsys.h> 953dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 954d382aafbSBarry Smith 955d382aafbSBarry Smith Not Collective 956d382aafbSBarry Smith 957d382aafbSBarry Smith Input Parameter: 958d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 959d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 960d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 961d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 962d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 963d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 964dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 965d382aafbSBarry Smith 966d382aafbSBarry Smith Output Parameter: 967d382aafbSBarry Smith + r1 - memory allocated in first chunk 968d382aafbSBarry Smith . r2 - memory allocated in second chunk 969d382aafbSBarry Smith . r3 - memory allocated in third chunk 970d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 971d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 972d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 973eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 974d382aafbSBarry Smith 975d382aafbSBarry Smith Level: developer 976d382aafbSBarry Smith 9771795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 978d382aafbSBarry Smith 979d382aafbSBarry Smith Concepts: memory allocation 980d382aafbSBarry Smith 981d382aafbSBarry Smith M*/ 98220a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 9831d2f33c5SMatthew G. Knepley #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5)) || PetscMalloc1((m6),(r6)) || PetscMalloc1((m7),(r7))) 984d382aafbSBarry Smith #else 985dcca6d9dSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \ 986ceba6b73SMatthew G. Knepley ((((m1)+(m2)+(m3)+(m4)+(m5)+(m6)+(m7)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+(m6)*sizeof(**(r6))+(m7)*sizeof(**(r7))+6*(PETSC_MEMALIGN-1),r1)) : 0) \ 987278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),*(void**)(r6) = PetscAddrAlign(*(r5)+(m5)),*(void**)(r7) = PetscAddrAlign(*(r6)+(m6)),0) \ 9883589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0) || (!(m4) ? (*(r4) = 0,0) : 0) || (!(m5) ? (*(r5) = 0,0) : 0) || (!(m6) ? (*(r6) = 0,0) : 0) || (!(m7) ? (*(r7) = 0,0) : 0)) 989d382aafbSBarry Smith #endif 990d382aafbSBarry Smith 991d382aafbSBarry Smith /*MC 9921795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 9931795a4d1SJed Brown 9941795a4d1SJed Brown Synopsis: 995aaa7dc30SBarry Smith #include <petscsys.h> 9961795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 9971795a4d1SJed Brown 9981795a4d1SJed Brown Not Collective 9991795a4d1SJed Brown 10001795a4d1SJed Brown Input Parameter: 10011795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10021795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10031795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10041795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10051795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10061795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10071795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10081795a4d1SJed Brown 10091795a4d1SJed Brown Output Parameter: 10101795a4d1SJed Brown + r1 - memory allocated in first chunk 10111795a4d1SJed Brown . r2 - memory allocated in second chunk 10121795a4d1SJed Brown . r3 - memory allocated in third chunk 10131795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10141795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10151795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10161795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10171795a4d1SJed Brown 10181795a4d1SJed Brown Level: developer 10191795a4d1SJed Brown 10201795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10211795a4d1SJed Brown 10221795a4d1SJed Brown Concepts: memory allocation 10231795a4d1SJed Brown M*/ 10241795a4d1SJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \ 10257ba0cc92SJed Brown (PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \ 10261795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \ 10271795a4d1SJed Brown || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5))) || PetscMemzero(*(r6),(m6)*sizeof(**(r6))) \ 10287ba0cc92SJed Brown || PetscMemzero(*(r7),(m7)*sizeof(**(r7)))) 10291795a4d1SJed Brown 10301795a4d1SJed Brown /*MC 1031503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1032d382aafbSBarry Smith 1033eca87e8dSBarry Smith Synopsis: 1034aaa7dc30SBarry Smith #include <petscsys.h> 1035b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1036eca87e8dSBarry Smith 1037eca87e8dSBarry Smith Not Collective 1038eca87e8dSBarry Smith 1039d382aafbSBarry Smith Output Parameter: 1040b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1041d382aafbSBarry Smith 1042d382aafbSBarry Smith Level: beginner 1043d382aafbSBarry Smith 1044ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog() 1045d382aafbSBarry Smith 1046d382aafbSBarry Smith Concepts: memory allocation 1047d382aafbSBarry Smith 1048d382aafbSBarry Smith M*/ 1049b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1050ad0619ddSBarry Smith 1051ad0619ddSBarry Smith /*MC 1052b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1053ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1054ad0619ddSBarry Smith 1055ad0619ddSBarry Smith Synopsis: 1056aaa7dc30SBarry Smith #include <petscsys.h> 1057b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1058ad0619ddSBarry Smith 1059ad0619ddSBarry Smith Not Collective 1060ad0619ddSBarry Smith 1061ad0619ddSBarry Smith Input Parameter: 1062b00a9115SJed Brown . obj - object memory is logged to 1063ad0619ddSBarry Smith 1064ad0619ddSBarry Smith Output Parameter: 1065b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1066ad0619ddSBarry Smith 1067ad0619ddSBarry Smith Level: developer 1068ad0619ddSBarry Smith 1069ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory() 1070ad0619ddSBarry Smith 1071ad0619ddSBarry Smith Concepts: memory allocation 1072ad0619ddSBarry Smith 1073ad0619ddSBarry Smith M*/ 1074b00a9115SJed Brown #define PetscNewLog(o,b) (PetscNew((b)) || ((o) ? PetscLogObjectMemory((PetscObject)o,sizeof(**(b))) : 0)) 1075d382aafbSBarry Smith 1076d382aafbSBarry Smith /*MC 1077d382aafbSBarry Smith PetscFree - Frees memory 1078d382aafbSBarry Smith 1079eca87e8dSBarry Smith Synopsis: 1080aaa7dc30SBarry Smith #include <petscsys.h> 1081eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1082eca87e8dSBarry Smith 1083eca87e8dSBarry Smith Not Collective 1084eca87e8dSBarry Smith 1085d382aafbSBarry Smith Input Parameter: 1086d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 1087d382aafbSBarry Smith 1088d382aafbSBarry Smith Level: beginner 1089d382aafbSBarry Smith 109049d7da52SJed Brown Notes: 109149d7da52SJed Brown Memory must have been obtained with PetscNew() or PetscMalloc(). 109249d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1093d382aafbSBarry Smith 1094d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 1095d382aafbSBarry Smith 1096d382aafbSBarry Smith Concepts: memory allocation 1097d382aafbSBarry Smith 1098d382aafbSBarry Smith M*/ 109949d7da52SJed Brown #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0)) 1100d382aafbSBarry Smith 1101d382aafbSBarry Smith /*MC 1102d382aafbSBarry Smith PetscFreeVoid - Frees memory 1103d382aafbSBarry Smith 1104d382aafbSBarry Smith Synopsis: 1105aaa7dc30SBarry Smith #include <petscsys.h> 1106d382aafbSBarry Smith void PetscFreeVoid(void *memory) 1107d382aafbSBarry Smith 1108eca87e8dSBarry Smith Not Collective 1109eca87e8dSBarry Smith 1110eca87e8dSBarry Smith Input Parameter: 1111eca87e8dSBarry Smith . memory - memory to free 1112eca87e8dSBarry Smith 1113d382aafbSBarry Smith Level: beginner 1114d382aafbSBarry Smith 1115d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 1116d382aafbSBarry Smith 1117d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 1118d382aafbSBarry Smith 1119d382aafbSBarry Smith Concepts: memory allocation 1120d382aafbSBarry Smith 1121d382aafbSBarry Smith M*/ 1122efca3c55SSatish Balay #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__),(a) = 0) 1123d382aafbSBarry Smith 1124d382aafbSBarry Smith 1125d382aafbSBarry Smith /*MC 1126d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1127d382aafbSBarry Smith 1128eca87e8dSBarry Smith Synopsis: 1129aaa7dc30SBarry Smith #include <petscsys.h> 1130eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1131eca87e8dSBarry Smith 1132eca87e8dSBarry Smith Not Collective 1133eca87e8dSBarry Smith 1134d382aafbSBarry Smith Input Parameter: 1135d382aafbSBarry Smith + memory1 - memory to free 1136d382aafbSBarry Smith - memory2 - 2nd memory to free 1137d382aafbSBarry Smith 1138d382aafbSBarry Smith Level: developer 1139d382aafbSBarry Smith 1140d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 1141d382aafbSBarry Smith 1142d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1143d382aafbSBarry Smith 1144d382aafbSBarry Smith Concepts: memory allocation 1145d382aafbSBarry Smith 1146d382aafbSBarry Smith M*/ 1147b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1148d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 1149d382aafbSBarry Smith #else 1150e38f91f2SMatthew G. Knepley #define PetscFree2(m1,m2) ((m1) ? ((m2)=0,PetscFree(m1)) : ((m1)=0,PetscFree(m2))) 1151d382aafbSBarry Smith #endif 1152d382aafbSBarry Smith 1153d382aafbSBarry Smith /*MC 1154d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1155d382aafbSBarry Smith 1156eca87e8dSBarry Smith Synopsis: 1157aaa7dc30SBarry Smith #include <petscsys.h> 1158eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1159eca87e8dSBarry Smith 1160eca87e8dSBarry Smith Not Collective 1161eca87e8dSBarry Smith 1162d382aafbSBarry Smith Input Parameter: 1163d382aafbSBarry Smith + memory1 - memory to free 1164d382aafbSBarry Smith . memory2 - 2nd memory to free 1165d382aafbSBarry Smith - memory3 - 3rd memory to free 1166d382aafbSBarry Smith 1167d382aafbSBarry Smith Level: developer 1168d382aafbSBarry Smith 1169d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 1170d382aafbSBarry Smith 1171d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1172d382aafbSBarry Smith 1173d382aafbSBarry Smith Concepts: memory allocation 1174d382aafbSBarry Smith 1175d382aafbSBarry Smith M*/ 1176b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1177d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1178d382aafbSBarry Smith #else 1179e38f91f2SMatthew G. Knepley #define PetscFree3(m1,m2,m3) ((m1) ? ((m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m3)=0,(m1)=0,PetscFree(m2)) : ((m2)=0,(m1)=0,PetscFree(m3)))) 1180d382aafbSBarry Smith #endif 1181d382aafbSBarry Smith 1182d382aafbSBarry Smith /*MC 1183d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1184d382aafbSBarry Smith 1185eca87e8dSBarry Smith Synopsis: 1186aaa7dc30SBarry Smith #include <petscsys.h> 1187eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1188eca87e8dSBarry Smith 1189eca87e8dSBarry Smith Not Collective 1190eca87e8dSBarry Smith 1191d382aafbSBarry Smith Input Parameter: 1192d382aafbSBarry Smith + m1 - memory to free 1193d382aafbSBarry Smith . m2 - 2nd memory to free 1194d382aafbSBarry Smith . m3 - 3rd memory to free 1195d382aafbSBarry Smith - m4 - 4th memory to free 1196d382aafbSBarry Smith 1197d382aafbSBarry Smith Level: developer 1198d382aafbSBarry Smith 1199d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 1200d382aafbSBarry Smith 1201d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1202d382aafbSBarry Smith 1203d382aafbSBarry Smith Concepts: memory allocation 1204d382aafbSBarry Smith 1205d382aafbSBarry Smith M*/ 1206b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1207d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1208d382aafbSBarry Smith #else 1209e38f91f2SMatthew G. Knepley #define PetscFree4(m1,m2,m3,m4) ((m1) ? ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : ((m3) ? ((m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m3)=0,(m2)=0,(m1)=0,PetscFree(m4))))) 1210d382aafbSBarry Smith #endif 1211d382aafbSBarry Smith 1212d382aafbSBarry Smith /*MC 1213d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1214d382aafbSBarry Smith 1215eca87e8dSBarry Smith Synopsis: 1216aaa7dc30SBarry Smith #include <petscsys.h> 1217eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1218eca87e8dSBarry Smith 1219eca87e8dSBarry Smith Not Collective 1220eca87e8dSBarry Smith 1221d382aafbSBarry Smith Input Parameter: 1222d382aafbSBarry Smith + m1 - memory to free 1223d382aafbSBarry Smith . m2 - 2nd memory to free 1224d382aafbSBarry Smith . m3 - 3rd memory to free 1225d382aafbSBarry Smith . m4 - 4th memory to free 1226d382aafbSBarry Smith - m5 - 5th memory to free 1227d382aafbSBarry Smith 1228d382aafbSBarry Smith Level: developer 1229d382aafbSBarry Smith 1230d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 1231d382aafbSBarry Smith 1232d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1233d382aafbSBarry Smith 1234d382aafbSBarry Smith Concepts: memory allocation 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith M*/ 1237b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1238d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1239d382aafbSBarry Smith #else 1240e38f91f2SMatthew G. Knepley #define PetscFree5(m1,m2,m3,m4,m5) ((m1) ? ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : ((m3) ? ((m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : \ 1241e38f91f2SMatthew G. Knepley ((m4) ? ((m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : ((m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5)))))) 1242d382aafbSBarry Smith #endif 1243d382aafbSBarry Smith 1244d382aafbSBarry Smith 1245d382aafbSBarry Smith /*MC 1246d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1247d382aafbSBarry Smith 1248eca87e8dSBarry Smith Synopsis: 1249aaa7dc30SBarry Smith #include <petscsys.h> 1250eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1251eca87e8dSBarry Smith 1252eca87e8dSBarry Smith Not Collective 1253eca87e8dSBarry Smith 1254d382aafbSBarry Smith Input Parameter: 1255d382aafbSBarry Smith + m1 - memory to free 1256d382aafbSBarry Smith . m2 - 2nd memory to free 1257d382aafbSBarry Smith . m3 - 3rd memory to free 1258d382aafbSBarry Smith . m4 - 4th memory to free 1259d382aafbSBarry Smith . m5 - 5th memory to free 1260d382aafbSBarry Smith - m6 - 6th memory to free 1261d382aafbSBarry Smith 1262d382aafbSBarry Smith 1263d382aafbSBarry Smith Level: developer 1264d382aafbSBarry Smith 1265d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1266d382aafbSBarry Smith 1267d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1268d382aafbSBarry Smith 1269d382aafbSBarry Smith Concepts: memory allocation 1270d382aafbSBarry Smith 1271d382aafbSBarry Smith M*/ 1272b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1273d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1274d382aafbSBarry Smith #else 1275e38f91f2SMatthew G. Knepley #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m1) ? ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : \ 1276e38f91f2SMatthew G. Knepley ((m3) ? ((m6)=0,(m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m4) ? ((m6)=0,(m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : \ 1277e38f91f2SMatthew G. Knepley ((m5) ? ((m6)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5)) : ((m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m6))))))) 1278d382aafbSBarry Smith #endif 1279d382aafbSBarry Smith 1280d382aafbSBarry Smith /*MC 1281d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1282d382aafbSBarry Smith 1283eca87e8dSBarry Smith Synopsis: 1284aaa7dc30SBarry Smith #include <petscsys.h> 1285eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1286eca87e8dSBarry Smith 1287eca87e8dSBarry Smith Not Collective 1288eca87e8dSBarry Smith 1289d382aafbSBarry Smith Input Parameter: 1290d382aafbSBarry Smith + m1 - memory to free 1291d382aafbSBarry Smith . m2 - 2nd memory to free 1292d382aafbSBarry Smith . m3 - 3rd memory to free 1293d382aafbSBarry Smith . m4 - 4th memory to free 1294d382aafbSBarry Smith . m5 - 5th memory to free 1295d382aafbSBarry Smith . m6 - 6th memory to free 1296d382aafbSBarry Smith - m7 - 7th memory to free 1297d382aafbSBarry Smith 1298d382aafbSBarry Smith 1299d382aafbSBarry Smith Level: developer 1300d382aafbSBarry Smith 1301d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1302d382aafbSBarry Smith 1303d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1304d382aafbSBarry Smith PetscMalloc7() 1305d382aafbSBarry Smith 1306d382aafbSBarry Smith Concepts: memory allocation 1307d382aafbSBarry Smith 1308d382aafbSBarry Smith M*/ 1309b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1310d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1311d382aafbSBarry Smith #else 1312e38f91f2SMatthew G. Knepley #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m1) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : \ 1313e38f91f2SMatthew G. Knepley ((m3) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m4) ? ((m7)=0,(m6)=0,(m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : \ 131406c0a5e5SMatthew G. Knepley ((m5) ? ((m7)=0,(m6)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5)) : ((m6) ? ((m7)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m6)) : \ 1315e38f91f2SMatthew G. Knepley ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m7)))))))) 1316d382aafbSBarry Smith #endif 1317d382aafbSBarry Smith 1318efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**); 1319efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 1320efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[])); 1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1322d382aafbSBarry Smith 1323d382aafbSBarry Smith /* 1324a5057860SBarry Smith PetscLogDouble variables are used to contain double precision numbers 1325a5057860SBarry Smith that are not used in the numerical computations, but rather in logging, 1326a5057860SBarry Smith timing etc. 1327a5057860SBarry Smith */ 1328a5057860SBarry Smith typedef double PetscLogDouble; 1329a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 1330a5057860SBarry Smith 1331a5057860SBarry Smith /* 133266d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1333d382aafbSBarry Smith */ 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 13390acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*); 1340efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1342574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1344d382aafbSBarry Smith 1345d382aafbSBarry Smith /*E 1346d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1347d382aafbSBarry Smith 1348d382aafbSBarry Smith Level: beginner 1349d382aafbSBarry Smith 1350d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1351d382aafbSBarry Smith 1352d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1353d382aafbSBarry Smith PetscDataTypeGetSize() 1354d382aafbSBarry Smith 1355d382aafbSBarry Smith E*/ 1356d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 13577e97c476SMatthew G. Knepley PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12, PETSC_STRING = 12} PetscDataType; 13586a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1359d382aafbSBarry Smith 1360d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1361d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1362d382aafbSBarry Smith #else 1363ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1364d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 136559a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 136659a34000SBarry Smith #define PETSC_SCALAR PETSC___FLOAT128 1367d382aafbSBarry Smith #else 1368d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1369d382aafbSBarry Smith #endif 1370d382aafbSBarry Smith #endif 1371ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1372d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 137359a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 137459a34000SBarry Smith #define PETSC_REAL PETSC___FLOAT128 1375d382aafbSBarry Smith #else 1376d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1377d382aafbSBarry Smith #endif 1378d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1379d382aafbSBarry Smith 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13838e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1384d382aafbSBarry Smith 1385d382aafbSBarry Smith /* 1386d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1387d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1388d382aafbSBarry Smith functionality and/or error checking. 1389d382aafbSBarry Smith */ 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1394d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t); 1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 14062f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 14112c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 141447340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 14156fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1417d382aafbSBarry Smith 1418573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1419573b0fb4SBarry Smith 1420d382aafbSBarry Smith /*S 1421d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1422d382aafbSBarry Smith 1423d382aafbSBarry Smith Level: intermediate 1424d382aafbSBarry Smith 1425d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1426d382aafbSBarry Smith S*/ 1427d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1428d382aafbSBarry Smith 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1432d382aafbSBarry Smith 1433a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1434a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1435a53986e1SJed Brown 1436d382aafbSBarry Smith /* 1437d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1438d382aafbSBarry Smith */ 1439014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op; 14407c2de775SJed Brown #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) 1441014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 14422414b3c7SJed Brown #else 14432414b3c7SJed Brown #define MPIU_SUM MPI_SUM 14442414b3c7SJed Brown #endif 14452414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128) 1446014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1447014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1448d9822059SBarry Smith #else 1449d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1450d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1451d9822059SBarry Smith #endif 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1453d382aafbSBarry Smith 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1456eb3f98d2SBarry Smith 1457d382aafbSBarry Smith /*S 1458d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1459d382aafbSBarry Smith 1460d382aafbSBarry Smith Level: beginner 1461d382aafbSBarry Smith 14622981ebdbSBarry Smith Note: This is the base class from which all PETSc objects are derived from. 1463d382aafbSBarry Smith 14641890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1465d382aafbSBarry Smith S*/ 1466d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1467d382aafbSBarry Smith 1468270bf2e7SJed Brown /*MC 1469127c8a3bSJed Brown PetscObjectId - unique integer Id for a PetscObject 1470127c8a3bSJed Brown 1471127c8a3bSJed Brown Level: developer 1472127c8a3bSJed Brown 1473127c8a3bSJed Brown Notes: Unlike pointer values, object ids are never reused. 1474127c8a3bSJed Brown 1475127c8a3bSJed Brown .seealso: PetscObjectState, PetscObjectGetId() 1476127c8a3bSJed Brown M*/ 1477127c8a3bSJed Brown typedef Petsc64bitInt PetscObjectId; 1478127c8a3bSJed Brown 1479127c8a3bSJed Brown /*MC 1480270bf2e7SJed Brown PetscObjectState - integer state for a PetscObject 1481270bf2e7SJed Brown 1482270bf2e7SJed Brown Level: developer 1483270bf2e7SJed Brown 1484270bf2e7SJed Brown Notes: 1485270bf2e7SJed Brown Object state is always-increasing and (for objects that track state) can be used to determine if an object has 1486270bf2e7SJed Brown changed since the last time you interacted with it. It is 64-bit so that it will not overflow for a very long time. 1487270bf2e7SJed Brown 14888dcff661SJed Brown .seealso: PetscObjectId, PetscObjectStateGet(), PetscObjectStateIncrease(), PetscObjectStateSet() 1489270bf2e7SJed Brown M*/ 1490270bf2e7SJed Brown typedef Petsc64bitInt PetscObjectState; 1491270bf2e7SJed Brown 1492d382aafbSBarry Smith /*S 1493140e18c1SBarry Smith PetscFunctionList - Linked list of functions, possibly stored in dynamic libraries, accessed 1494d382aafbSBarry Smith by string name 1495d382aafbSBarry Smith 1496d382aafbSBarry Smith Level: advanced 1497d382aafbSBarry Smith 1498140e18c1SBarry Smith .seealso: PetscFunctionListAdd(), PetscFunctionListDestroy(), PetscOpFlist 1499d382aafbSBarry Smith S*/ 1500140e18c1SBarry Smith typedef struct _n_PetscFunctionList *PetscFunctionList; 1501d382aafbSBarry Smith 1502d382aafbSBarry Smith /*E 1503d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1504d382aafbSBarry Smith 1505d382aafbSBarry Smith Level: beginner 1506d382aafbSBarry Smith 1507d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1508d382aafbSBarry Smith 1509d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1510d382aafbSBarry Smith 1511d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1512d382aafbSBarry Smith 1513d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1514d382aafbSBarry Smith 1515d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1516d382aafbSBarry Smith 1517d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1518d382aafbSBarry Smith E*/ 1519d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1520d6a4318aSJed Brown extern const char *const PetscFileModes[]; 1521d6a4318aSJed Brown 1522639ff905SBarry Smith /* 1523639ff905SBarry Smith Defines PETSc error handling. 1524639ff905SBarry Smith */ 1525639ff905SBarry Smith #include <petscerror.h> 1526d382aafbSBarry Smith 15270700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1528014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1529014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1531d382aafbSBarry Smith 1532d382aafbSBarry Smith /* 1533d382aafbSBarry Smith Routines that get memory usage information from the OS 1534d382aafbSBarry Smith */ 1535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1538b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1539d382aafbSBarry Smith 1540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1542d382aafbSBarry Smith 1543d382aafbSBarry Smith /* 1544d382aafbSBarry Smith Initialization of PETSc 1545d382aafbSBarry Smith */ 1546014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1547014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1554014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1555014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1556d382aafbSBarry Smith 1557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1558607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1559d382aafbSBarry Smith 1560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1561014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1562014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1563014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1564d382aafbSBarry Smith 1565d382aafbSBarry Smith /* 1566d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 15672981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1568d382aafbSBarry Smith */ 1569638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1570638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1571638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1572d382aafbSBarry Smith 1573d382aafbSBarry Smith /* 1574d382aafbSBarry Smith Functions that can act on any PETSc object. 1575d382aafbSBarry Smith */ 1576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision); 1582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1585014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1586014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1595bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1596bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*); 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject); 1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject); 1603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 1604d382aafbSBarry Smith 1605665c2dedSJed Brown #include <petscviewertypes.h> 1606639ff905SBarry Smith #include <petscoptions.h> 1607639ff905SBarry Smith 1608639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1609dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1610639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 16110005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 16120005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1620ce1779c8SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,const char[],const char[]); 1621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1626d382aafbSBarry Smith 1627e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 16287aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1629e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1630e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1631e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1632e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1633e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1634e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1635e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1636e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1637e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 163815681b3cSBarry Smith 1639ec7429eaSBarry Smith #else 16407aab2a10SBarry Smith #define PetscSAWsBlock() 0 1641e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1642e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1643e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1644e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1645e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1646e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1647e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1648e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1649e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 165015681b3cSBarry Smith 1651ec7429eaSBarry Smith #endif 1652b90c6cbeSBarry Smith 16537d5d4d99SBarry Smith typedef void* PetscDLHandle; 1654e4d177b5SBarry Smith typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode; 165582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 165682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 165782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 16587d5d4d99SBarry Smith 1659d382aafbSBarry Smith 16605fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1661a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 16625fe58b6fSBarry Smith #endif 16637eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1664a64a8e02SBarry Smith 1665d382aafbSBarry Smith /*S 1666140e18c1SBarry Smith PetscObjectList - Linked list of PETSc objects, each accessable by string name 1667d382aafbSBarry Smith 16681d0fab5eSBarry Smith Level: developer 1669d382aafbSBarry Smith 16701d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 16711d0fab5eSBarry Smith 1672140e18c1SBarry Smith .seealso: PetscObjectListAdd(), PetscObjectListDestroy(), PetscObjectListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFunctionList 1673d382aafbSBarry Smith S*/ 1674140e18c1SBarry Smith typedef struct _n_PetscObjectList *PetscObjectList; 1675d382aafbSBarry Smith 1676140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1677140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1678140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1679140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1680140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1681140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1682d382aafbSBarry Smith 1683d382aafbSBarry Smith /* 1684503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1685d382aafbSBarry Smith link libraries that will be loaded as needed. 1686d382aafbSBarry Smith */ 1687a240a19fSJed Brown 1688a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1689a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1690140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 16911c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 16921c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 1693140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]); 1694140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1695140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1696140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1697d382aafbSBarry Smith 1698d382aafbSBarry Smith /*S 1699d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1700d382aafbSBarry Smith 1701d382aafbSBarry Smith Level: advanced 1702d382aafbSBarry Smith 1703d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1704d382aafbSBarry Smith S*/ 1705d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1706014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1707014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1708014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1709014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1710014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1711014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1712014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1713014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1714d382aafbSBarry Smith 1715d382aafbSBarry Smith /* 1716d382aafbSBarry Smith Useful utility routines 1717d382aafbSBarry Smith */ 1718014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1719014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1720014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1721014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1722014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1723014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1724d382aafbSBarry Smith 1725503cfb0cSBarry Smith /* 1726ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1727503cfb0cSBarry Smith 1728503cfb0cSBarry Smith Notes: This is useful in cases like 1729503cfb0cSBarry Smith $ int *a; 1730ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 1731ace3abfcSBarry Smith where !a does not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1732503cfb0cSBarry Smith */ 1733d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1734503cfb0cSBarry Smith 1735cae2f346SBarry Smith #if defined(PETSC_HAVE_VALGRIND) 1736cae2f346SBarry Smith # include <valgrind/valgrind.h> 1737cae2f346SBarry Smith # define PETSC_RUNNING_ON_VALGRIND RUNNING_ON_VALGRIND 1738cae2f346SBarry Smith #else 1739cae2f346SBarry Smith # define PETSC_RUNNING_ON_VALGRIND PETSC_FALSE 1740cae2f346SBarry Smith #endif 1741cae2f346SBarry Smith 1742238ccf28SShri Abhyankar 1743d382aafbSBarry Smith /*MC 1744d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1745d382aafbSBarry Smith 1746d382aafbSBarry Smith Synopsis: 1747aaa7dc30SBarry Smith #include <petscsys.h> 1748d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1749d382aafbSBarry Smith 1750eca87e8dSBarry Smith Not Collective 1751eca87e8dSBarry Smith 1752d382aafbSBarry Smith Input Parameters: 1753d382aafbSBarry Smith . format - the usual printf() format string 1754d382aafbSBarry Smith 1755d382aafbSBarry Smith Level: developer 1756d382aafbSBarry Smith 1757d382aafbSBarry Smith Fortran Note: 1758d382aafbSBarry Smith This routine is not supported in Fortran. 1759d382aafbSBarry Smith 1760d382aafbSBarry Smith Concepts: help messages^printing 1761d382aafbSBarry Smith Concepts: printing^help messages 1762d382aafbSBarry Smith 1763d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1764d382aafbSBarry Smith M*/ 1765014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1766d382aafbSBarry Smith 1767fcfd50ebSBarry Smith /* 1768fcfd50ebSBarry Smith Defines PETSc profiling. 1769fcfd50ebSBarry Smith */ 17702c8e378dSBarry Smith #include <petsclog.h> 1771fcfd50ebSBarry Smith 1772b90c6cbeSBarry Smith 1773fcfd50ebSBarry Smith 1774fcfd50ebSBarry Smith /* 1775fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1776fcfd50ebSBarry Smith */ 1777014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1778014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1779014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1780014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1781014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1782014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1783014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 1784fcfd50ebSBarry Smith 1785fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1786fcfd50ebSBarry Smith #include <stdarg.h> 1787014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 1788014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 1789014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list); 1790fcfd50ebSBarry Smith 1791fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE) 1792014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list); 1793fcfd50ebSBarry Smith #endif 1794fcfd50ebSBarry Smith 1795014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1796014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1797014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1798d382aafbSBarry Smith 1799d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1800014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 180196a8e8cbSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,int*); 180274ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1803d382aafbSBarry Smith #endif 1804d382aafbSBarry Smith 1805014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1806014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 18070ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1808014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1809014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1810014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1811014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1812d382aafbSBarry Smith 1813014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1814d382aafbSBarry Smith 1815d382aafbSBarry Smith /*S 1816d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1817d382aafbSBarry Smith 1818d382aafbSBarry Smith Level: advanced 1819d382aafbSBarry Smith 1820d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1821d382aafbSBarry Smith S*/ 1822014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1823d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 1824014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1825014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1826014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1827014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1828014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1829d382aafbSBarry Smith 1830d382aafbSBarry Smith /* 1831d382aafbSBarry Smith For use in debuggers 1832d382aafbSBarry Smith */ 1833014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1834014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1835014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1836014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1837014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1838d382aafbSBarry Smith 1839a663daf8SBarry Smith #include <stddef.h> 1840a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1841d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1842d382aafbSBarry Smith #include <stdlib.h> 1843d382aafbSBarry Smith #endif 18446c7e564aSBarry Smith 18454a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1846d382aafbSBarry Smith #include <xmmintrin.h> 1847d382aafbSBarry Smith #endif 1848d382aafbSBarry Smith 1849fcfd50ebSBarry Smith #undef __FUNCT__ 1850fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy" 1851d382aafbSBarry Smith /*@C 1852d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1853d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1854d382aafbSBarry Smith PetscMemmove() in that case. 1855d382aafbSBarry Smith 1856d382aafbSBarry Smith Not Collective 1857d382aafbSBarry Smith 1858d382aafbSBarry Smith Input Parameters: 1859d382aafbSBarry Smith + b - pointer to initial memory space 1860d382aafbSBarry Smith - n - length (in bytes) of space to copy 1861d382aafbSBarry Smith 1862d382aafbSBarry Smith Output Parameter: 1863d382aafbSBarry Smith . a - pointer to copy space 1864d382aafbSBarry Smith 1865d382aafbSBarry Smith Level: intermediate 1866d382aafbSBarry Smith 1867d382aafbSBarry Smith Compile Option: 1868d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1869d382aafbSBarry Smith for memory copies on double precision values. 1870d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1871d382aafbSBarry Smith for memory copies on double precision values. 1872d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1873d382aafbSBarry Smith for memory copies on double precision values. 1874d382aafbSBarry Smith 1875d382aafbSBarry Smith Note: 1876d382aafbSBarry Smith This routine is analogous to memcpy(). 1877d382aafbSBarry Smith 1878503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1879503cfb0cSBarry Smith 1880d382aafbSBarry Smith Concepts: memory^copying 1881d382aafbSBarry Smith Concepts: copying^memory 1882d382aafbSBarry Smith 1883d382aafbSBarry Smith .seealso: PetscMemmove() 1884d382aafbSBarry Smith 1885d382aafbSBarry Smith @*/ 18867087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1887d382aafbSBarry Smith { 1888d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1889d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1890d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1891a7e36092SMatthew G Knepley PetscFunctionBegin; 1892e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1893e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1894a7e36092SMatthew G Knepley #else 1895d382aafbSBarry Smith PetscFunctionBegin; 1896a7e36092SMatthew G Knepley #endif 1897d382aafbSBarry Smith if (a != b) { 1898d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1899e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1900d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1901d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1902d382aafbSBarry Smith #endif 1903d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1904d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1905d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1906d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1907c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1908c5df96a5SBarry Smith PetscErrorCode ierr; 1909c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 19108b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1911d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1912d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1913d382aafbSBarry Smith #else 1914d382aafbSBarry Smith size_t i; 1915d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1916d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1917d382aafbSBarry Smith #endif 1918d382aafbSBarry Smith } else { 1919d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1920d382aafbSBarry Smith } 1921d382aafbSBarry Smith #else 1922d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1923d382aafbSBarry Smith #endif 1924d382aafbSBarry Smith } 1925d382aafbSBarry Smith PetscFunctionReturn(0); 1926d382aafbSBarry Smith } 1927d382aafbSBarry Smith 1928d382aafbSBarry Smith /*@C 1929d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1930d382aafbSBarry Smith 1931d382aafbSBarry Smith Not Collective 1932d382aafbSBarry Smith 1933d382aafbSBarry Smith Input Parameters: 1934d382aafbSBarry Smith + a - pointer to beginning memory location 1935d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1936d382aafbSBarry Smith 1937d382aafbSBarry Smith Level: intermediate 1938d382aafbSBarry Smith 1939d382aafbSBarry Smith Compile Option: 1940d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1941d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1942d382aafbSBarry Smith 1943503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1944503cfb0cSBarry Smith 1945d382aafbSBarry Smith Concepts: memory^zeroing 1946d382aafbSBarry Smith Concepts: zeroing^memory 1947d382aafbSBarry Smith 1948d382aafbSBarry Smith .seealso: PetscMemcpy() 1949d382aafbSBarry Smith @*/ 19507087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1951d382aafbSBarry Smith { 1952d382aafbSBarry Smith if (n > 0) { 1953d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1954e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1955d382aafbSBarry Smith #endif 1956d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1957d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1958d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1959d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1960d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1961d382aafbSBarry Smith } else { 1962d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1963d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1964d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1965d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1966d382aafbSBarry Smith } else { 1967d382aafbSBarry Smith #endif 1968d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1969d382aafbSBarry Smith bzero((char *)a,n); 1970d382aafbSBarry Smith #else 1971d382aafbSBarry Smith memset((char*)a,0,n); 1972d382aafbSBarry Smith #endif 1973d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1974d382aafbSBarry Smith } 1975d382aafbSBarry Smith #endif 1976d382aafbSBarry Smith } 1977d382aafbSBarry Smith return 0; 1978d382aafbSBarry Smith } 1979d382aafbSBarry Smith 1980d382aafbSBarry Smith /*MC 1981d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1982d382aafbSBarry Smith 1983eca87e8dSBarry Smith Synopsis: 1984aaa7dc30SBarry Smith #include <petscsys.h> 1985eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1986eca87e8dSBarry Smith 1987d382aafbSBarry Smith Not Collective 1988d382aafbSBarry Smith 1989d382aafbSBarry Smith Input Parameters: 1990d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1991d382aafbSBarry Smith . n - number of elements to fetch 1992d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 199350d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1994d382aafbSBarry Smith 1995d382aafbSBarry Smith Level: developer 1996d382aafbSBarry Smith 1997d382aafbSBarry Smith Notes: 1998d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1999d382aafbSBarry Smith 200050d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 200150d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 200250d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 200363cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 200463cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 200563cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2008d382aafbSBarry Smith address). 2009d382aafbSBarry Smith 2010d382aafbSBarry Smith Concepts: memory 2011d382aafbSBarry Smith M*/ 2012d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2013d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2014d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2015d382aafbSBarry Smith } while (0) 2016d382aafbSBarry Smith 2017d382aafbSBarry Smith /* 2018d382aafbSBarry Smith Determine if some of the kernel computation routines use 2019d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2020d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2021d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2022e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2023d382aafbSBarry Smith */ 2024d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2025d382aafbSBarry Smith 2026d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2027d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2028d382aafbSBarry Smith #endif 2029d382aafbSBarry Smith 20305a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20315a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2032d382aafbSBarry Smith #endif 2033d382aafbSBarry Smith 2034d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2035d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2036d382aafbSBarry Smith #endif 2037d382aafbSBarry Smith 2038d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2039d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2040d382aafbSBarry Smith #endif 2041d382aafbSBarry Smith 2042d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2043d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2044d382aafbSBarry Smith #endif 2045d382aafbSBarry Smith 2046d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2047d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2048d382aafbSBarry Smith #endif 2049d382aafbSBarry Smith 2050d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2051d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2052d382aafbSBarry Smith #endif 2053d382aafbSBarry Smith 2054d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2055d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2056d382aafbSBarry Smith #endif 2057d382aafbSBarry Smith 2058d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2059d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2060d382aafbSBarry Smith #endif 2061d382aafbSBarry Smith 2062d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2063d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2064d382aafbSBarry Smith #endif 2065d382aafbSBarry Smith 2066d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2067d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2068d382aafbSBarry Smith #endif 2069d382aafbSBarry Smith 2070d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2071d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2072d382aafbSBarry Smith #endif 2073d382aafbSBarry Smith 2074d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2075d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2076d382aafbSBarry Smith #endif 2077d382aafbSBarry Smith 2078d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2079d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2080d382aafbSBarry Smith #endif 2081d382aafbSBarry Smith 2082d382aafbSBarry Smith #endif 2083d382aafbSBarry Smith 2084d382aafbSBarry Smith /* 2085d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2086d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2087d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2088d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2089d382aafbSBarry Smith ugly extern "C" {} wrappers. 2090d382aafbSBarry Smith */ 2091d382aafbSBarry Smith #if defined(__cplusplus) 2092d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 2093d382aafbSBarry Smith #define EXTERN_C_END } 2094d382aafbSBarry Smith #else 2095d382aafbSBarry Smith #define EXTERN_C_BEGIN 2096d382aafbSBarry Smith #define EXTERN_C_END 2097d382aafbSBarry Smith #endif 2098d382aafbSBarry Smith 2099d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2100d382aafbSBarry Smith 2101d382aafbSBarry Smith /*MC 2102d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2103d382aafbSBarry Smith communication 2104d382aafbSBarry Smith 2105d382aafbSBarry Smith Level: beginner 2106d382aafbSBarry Smith 2107d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2108d382aafbSBarry Smith 2109d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2110d382aafbSBarry Smith M*/ 2111d382aafbSBarry Smith 2112d382aafbSBarry Smith /*MC 2113d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 2114d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 2115d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 2116d382aafbSBarry Smith 2117d382aafbSBarry Smith 2118d382aafbSBarry Smith Level: beginner 2119d382aafbSBarry Smith 2120d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 2121d382aafbSBarry Smith M*/ 2122d382aafbSBarry Smith 2123d382aafbSBarry Smith /*MC 21248619c96cSJed Brown PetscComplex - PETSc type that represents a complex number with precision matching that of PetscReal. 21258619c96cSJed Brown 21268619c96cSJed Brown Synopsis: 21278619c96cSJed Brown #define PETSC_DESIRE_COMPLEX 21288619c96cSJed Brown #include <petscsys.h> 21298619c96cSJed Brown PetscComplex number = 1. + 2.*PETSC_i; 21308619c96cSJed Brown 21318619c96cSJed Brown Level: beginner 21328619c96cSJed Brown 21338619c96cSJed Brown Note: 21348619c96cSJed Brown Complex numbers are automatically available if PETSc was configured --with-scalar-type=complex (in which case 21358619c96cSJed Brown PetscComplex will match PetscScalar), otherwise the macro PETSC_DESIRE_COMPLEX must be defined before including any 21368619c96cSJed Brown PETSc headers. If the compiler supports complex numbers, PetscComplex and associated variables and functions will be 21378619c96cSJed Brown defined and PETSC_HAVE_COMPLEX will be set. 21388619c96cSJed Brown 21398619c96cSJed Brown .seealso: PetscReal, PetscComplex, MPIU_COMPLEX, PetscInt, PETSC_i 21408619c96cSJed Brown M*/ 21418619c96cSJed Brown 21428619c96cSJed Brown /*MC 2143d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 2144d382aafbSBarry Smith 2145d382aafbSBarry Smith Level: beginner 2146d382aafbSBarry Smith 2147d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 2148d382aafbSBarry Smith M*/ 2149d382aafbSBarry Smith 2150d382aafbSBarry Smith /*MC 2151d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 2152d382aafbSBarry Smith Level: beginner 2153d382aafbSBarry Smith 2154d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 2155d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2156d382aafbSBarry Smith 2157d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 2158d382aafbSBarry Smith M*/ 2159d382aafbSBarry Smith 2160d382aafbSBarry Smith /*MC 2161d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 2162d382aafbSBarry Smith 2163d382aafbSBarry Smith Level: beginner 2164d382aafbSBarry Smith 2165d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 2166d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2167d382aafbSBarry Smith 2168d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2169d382aafbSBarry Smith M*/ 2170d382aafbSBarry Smith 2171d382aafbSBarry Smith /*MC 2172d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2173d382aafbSBarry Smith 2174d382aafbSBarry Smith Level: beginner 2175d382aafbSBarry Smith 2176d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2177d382aafbSBarry Smith pass this value 2178d382aafbSBarry Smith 2179d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2180d382aafbSBarry Smith M*/ 2181d382aafbSBarry Smith 2182d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2183d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2184014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2185014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2186d382aafbSBarry Smith #else 2187d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2188d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2189d382aafbSBarry Smith #endif 2190d382aafbSBarry Smith #endif 2191d382aafbSBarry Smith 2192d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2193d382aafbSBarry Smith 2194d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2195d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2196d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2197d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2198d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2199d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2200d382aafbSBarry Smith 2201c5df96a5SBarry Smith #undef __FUNCT__ 2202c5df96a5SBarry Smith #define __FUNCT__ "PetscBLASIntCast" 2203c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2204c5df96a5SBarry Smith { 2205c5df96a5SBarry Smith PetscFunctionBegin; 2206c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2207c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2208c5df96a5SBarry Smith #endif 2209c5df96a5SBarry Smith *b = (PetscBLASInt)(a); 2210c5df96a5SBarry Smith PetscFunctionReturn(0); 2211c5df96a5SBarry Smith } 2212c5df96a5SBarry Smith 22134dc2109aSBarry Smith #undef __FUNCT__ 22144dc2109aSBarry Smith #define __FUNCT__ "PetscMPIIntCast" 22154dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22164dc2109aSBarry Smith { 22174dc2109aSBarry Smith PetscFunctionBegin; 22184dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 22194dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 22204dc2109aSBarry Smith #endif 22214dc2109aSBarry Smith *b = (PetscMPIInt)(a); 22224dc2109aSBarry Smith PetscFunctionReturn(0); 22234dc2109aSBarry Smith } 22244dc2109aSBarry Smith 2225c5df96a5SBarry Smith 2226d382aafbSBarry Smith /* 22272981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2228d382aafbSBarry Smith */ 2229d382aafbSBarry Smith #if defined(hz) 2230d382aafbSBarry Smith #undef hz 2231d382aafbSBarry Smith #endif 2232d382aafbSBarry Smith 2233d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2234d382aafbSBarry Smith 2235d382aafbSBarry Smith 2236d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2237d382aafbSBarry Smith #include <limits.h> 2238d382aafbSBarry Smith #endif 2239d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2240d382aafbSBarry Smith #include <sys/param.h> 2241d382aafbSBarry Smith #endif 2242d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2243d382aafbSBarry Smith #include <sys/types.h> 2244d382aafbSBarry Smith #endif 2245d382aafbSBarry Smith #if defined(MAXPATHLEN) 2246d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2247d382aafbSBarry Smith #elif defined(MAX_PATH) 2248d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2249d382aafbSBarry Smith #elif defined(_MAX_PATH) 2250d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2251d382aafbSBarry Smith #else 2252d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2253d382aafbSBarry Smith #endif 2254d382aafbSBarry Smith 2255d382aafbSBarry Smith /*MC 2256d382aafbSBarry Smith 2257d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2258d382aafbSBarry Smith 2259d382aafbSBarry Smith $ 1) classic Fortran 77 style 2260d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc 2261d382aafbSBarry Smith $ XXX variablename 2262d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2263d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2264d382aafbSBarry Smith $ 2265d382aafbSBarry Smith $ 2) classic Fortran 90 style 2266d1716517SSatish Balay $#include "finclude/petscXXX.h" 2267d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2268d382aafbSBarry Smith $ XXX variablename 2269d382aafbSBarry Smith $ 2270d382aafbSBarry Smith $ 3) Using Fortran modules 2271d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2272d382aafbSBarry Smith $ use petscXXXX 2273d382aafbSBarry Smith $ XXX variablename 2274d382aafbSBarry Smith $ 2275d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2276d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2277d382aafbSBarry Smith $ use petscXXXX 2278d382aafbSBarry Smith $ type(XXX) variablename 2279e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2280d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2281d382aafbSBarry Smith 2282d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2283d382aafbSBarry Smith 2284d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2285d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2286d382aafbSBarry Smith $ integer variablename 2287d382aafbSBarry Smith $ 2288d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2289d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2290d382aafbSBarry Smith 2291d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2292d382aafbSBarry Smith for only a few PETSc functions. 2293d382aafbSBarry Smith 2294d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2295d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2296d382aafbSBarry Smith you cannot have something like 2297d382aafbSBarry Smith $ PetscInt row,col 2298d382aafbSBarry Smith $ PetscScalar val 2299d382aafbSBarry Smith $ ... 2300d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2301d382aafbSBarry Smith You must instead have 2302d382aafbSBarry Smith $ PetscInt row(1),col(1) 2303d382aafbSBarry Smith $ PetscScalar val(1) 2304d382aafbSBarry Smith $ ... 2305d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2306d382aafbSBarry Smith 2307d382aafbSBarry Smith 2308d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2309d382aafbSBarry Smith 2310d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2311d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2312d382aafbSBarry Smith 2313d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2314d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2315d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2316d382aafbSBarry Smith 2317d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2318e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2319d382aafbSBarry Smith 2320d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2321d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2322d382aafbSBarry Smith 2323d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2324d382aafbSBarry Smith automatically by "make allfortranstubs". 2325d382aafbSBarry Smith 2326e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2327d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2328d382aafbSBarry Smith include their predecessors 2329d382aafbSBarry Smith 2330d382aafbSBarry Smith Level: beginner 2331d382aafbSBarry Smith 2332d382aafbSBarry Smith M*/ 2333d382aafbSBarry Smith 2334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 234027710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 2341d382aafbSBarry Smith 2342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 234460e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*); 234917d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 235017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 2353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2355745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**); 2360d382aafbSBarry Smith 2361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2363d382aafbSBarry Smith 236476bdecfbSBarry Smith /*J 2365d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2366d382aafbSBarry Smith 2367d382aafbSBarry Smith Level: beginner 2368d382aafbSBarry Smith 2369e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2370d382aafbSBarry Smith with the option --download-sprng 2371d382aafbSBarry Smith 23728f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 237376bdecfbSBarry Smith J*/ 237419fd82e9SBarry Smith typedef const char* PetscRandomType; 2375d382aafbSBarry Smith #define PETSCRAND "rand" 2376d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2377d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2378d382aafbSBarry Smith 2379d382aafbSBarry Smith /* Logging support */ 2380014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2381d382aafbSBarry Smith 2382607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2383d382aafbSBarry Smith 2384d382aafbSBarry Smith /*S 2385d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2386d382aafbSBarry Smith 2387d382aafbSBarry Smith Level: intermediate 2388d382aafbSBarry Smith 2389d382aafbSBarry Smith Concepts: random numbers 2390d382aafbSBarry Smith 2391d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2392d382aafbSBarry Smith S*/ 2393d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2394d382aafbSBarry Smith 2395d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2396140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2397014dd563SJed Brown PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled; 2398d382aafbSBarry Smith 2399607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(void); 2400bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 240119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 240319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2404ce1779c8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,const char prefix[],const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,prefix,name);} 2405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2406d382aafbSBarry Smith 2407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2416d382aafbSBarry Smith 2417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 2424d382aafbSBarry Smith 2425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2436e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int); 2438d382aafbSBarry Smith 2439d382aafbSBarry Smith /* 2440d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2441d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2442d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2443d382aafbSBarry Smith PetscBinarySeek(). 2444d382aafbSBarry Smith */ 2445d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2446d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2447d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2448d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2449d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2450d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2451d382aafbSBarry Smith 2452d382aafbSBarry Smith /*E 2453d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2454d382aafbSBarry Smith 2455d382aafbSBarry Smith Level: advanced 2456d382aafbSBarry Smith 2457d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2458d382aafbSBarry Smith E*/ 2459d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2463d382aafbSBarry Smith 2464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2470d382aafbSBarry Smith 2471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2476f6ced4a3SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscInt,const PetscMPIInt*,const void*,PetscInt*,PetscMPIInt**,void*) PetscAttrMPIPointerWithType(6,3); 2477d382aafbSBarry Smith 24786145cd65SJed Brown /*E 24796145cd65SJed Brown PetscBuildTwoSidedType - algorithm for setting up two-sided communication 24806145cd65SJed Brown 24816145cd65SJed Brown $ PETSC_BUILDTWOSIDED_ALLREDUCE - classical algorithm using an MPI_Allreduce with 24826145cd65SJed Brown $ a buffer of length equal to the communicator size. Not memory-scalable due to 24836145cd65SJed Brown $ the large reduction size. Requires only MPI-1. 24846145cd65SJed Brown $ PETSC_BUILDTWOSIDED_IBARRIER - nonblocking algorithm based on MPI_Issend and MPI_Ibarrier. 24856145cd65SJed Brown $ Proved communication-optimal in Hoefler, Siebert, and Lumsdaine (2010). Requires MPI-3. 24866145cd65SJed Brown 24876145cd65SJed Brown Level: developer 24886145cd65SJed Brown 24896145cd65SJed Brown .seealso: PetscCommBuildTwoSided(), PetscCommBuildTwoSidedSetType(), PetscCommBuildTwoSidedGetType() 24906145cd65SJed Brown E*/ 24916145cd65SJed Brown typedef enum { 24926145cd65SJed Brown PETSC_BUILDTWOSIDED_NOTSET = -1, 24936145cd65SJed Brown PETSC_BUILDTWOSIDED_ALLREDUCE = 0, 24946145cd65SJed Brown PETSC_BUILDTWOSIDED_IBARRIER = 1 24956145cd65SJed Brown /* Updates here must be accompanied by updates in finclude/petscsys.h and the string array in mpits.c */ 24966145cd65SJed Brown } PetscBuildTwoSidedType; 24976145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 24986145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 24996145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 25006145cd65SJed Brown 2501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2502d382aafbSBarry Smith 2503d382aafbSBarry Smith /*E 2504d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2505d382aafbSBarry Smith 2506d382aafbSBarry Smith Level: beginner 2507d382aafbSBarry Smith 2508d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2509d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2510d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2511d382aafbSBarry Smith E*/ 25126fbadbe2SMatthew G Knepley typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode; 2513d382aafbSBarry Smith 2514d382aafbSBarry Smith /*MC 2515d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2516d382aafbSBarry Smith 2517d382aafbSBarry Smith Level: beginner 2518d382aafbSBarry Smith 2519d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2520eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2521eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2522d382aafbSBarry Smith 2523d382aafbSBarry Smith M*/ 2524d382aafbSBarry Smith 2525d382aafbSBarry Smith /*MC 2526d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2527d382aafbSBarry Smith value into that location 2528d382aafbSBarry Smith 2529d382aafbSBarry Smith Level: beginner 2530d382aafbSBarry Smith 2531d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2532eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2533eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2534d382aafbSBarry Smith 2535d382aafbSBarry Smith M*/ 2536d382aafbSBarry Smith 2537d382aafbSBarry Smith /*MC 2538d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2539d382aafbSBarry Smith 2540d382aafbSBarry Smith Level: beginner 2541d382aafbSBarry Smith 2542d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2543d382aafbSBarry Smith 2544d382aafbSBarry Smith M*/ 2545d382aafbSBarry Smith 2546ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2547ce94432eSBarry Smith 254845487dadSJed Brown typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 254945487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 255045487dadSJed Brown 2551d382aafbSBarry Smith /*S 2552d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2553d382aafbSBarry Smith 2554d382aafbSBarry Smith Level: advanced 2555d382aafbSBarry Smith 2556d382aafbSBarry Smith Concepts: communicator, create 2557d382aafbSBarry Smith S*/ 2558d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2559d382aafbSBarry Smith 2560d382aafbSBarry Smith struct _n_PetscSubcomm { 2561d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2562d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2563d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 256445487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 256545487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2566708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 256745487dadSJed Brown PetscSubcommType type; 2568d382aafbSBarry Smith }; 2569d382aafbSBarry Smith 2570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2571014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 257465d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2575053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2576f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2577d382aafbSBarry Smith 25780f453b92SJed Brown /*S 25790f453b92SJed Brown PetscSegBuffer - a segmented extendable buffer 25800f453b92SJed Brown 25810f453b92SJed Brown Level: developer 25820f453b92SJed Brown 25830f453b92SJed Brown .seealso: PetscSegBufferCreate(), PetscSegBufferGet(), PetscSegBufferExtract(), PetscSegBufferDestroy() 25840f453b92SJed Brown S*/ 25850f453b92SJed Brown typedef struct _n_PetscSegBuffer *PetscSegBuffer; 258613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 25870f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 258813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2589137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2590137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2591137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 259213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 259313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 25940f453b92SJed Brown 2595471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2596471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2597471ecdacSJed Brown * possible. */ 2598f4f617ceSJed Brown PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2599d382aafbSBarry Smith 2600*268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 26011f817a21SBarry Smith #undef __FUNCT__ 26021f817a21SBarry Smith #define __FUNCT__ "PetscCitationsRegister" 26031f817a21SBarry Smith /*@C 26041f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26051f817a21SBarry Smith 26061f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 26071f817a21SBarry Smith 26081f817a21SBarry Smith Input Parameters: 26091f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 26101f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 26111f817a21SBarry Smith 2612850545d0SSatish Balay Level: intermediate 2613850545d0SSatish Balay 26141f817a21SBarry Smith Options Database: 26151f817a21SBarry Smith . -citations [filenmae] - print out the bibtex entries for the given computation 26161f817a21SBarry Smith @*/ 2617dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2618dff31646SBarry Smith { 2619dff31646SBarry Smith size_t len; 2620dff31646SBarry Smith char *vstring; 2621dff31646SBarry Smith PetscErrorCode ierr; 2622dff31646SBarry Smith 26231f817a21SBarry Smith PetscFunctionBegin; 26248d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2625dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 2626dff31646SBarry Smith ierr = PetscSegBufferGet(PetscCitationsList,(PetscInt)len,&vstring);CHKERRQ(ierr); 2627dff31646SBarry Smith ierr = PetscMemcpy(vstring,cit,len);CHKERRQ(ierr); 2628dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26291f817a21SBarry Smith PetscFunctionReturn(0); 2630dff31646SBarry Smith } 2631dff31646SBarry Smith 2632b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2633fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2634fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2635f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2636fe278a28SBarry Smith 2637f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2638f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2639b967cddfSBarry Smith 264004102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2641dff31646SBarry Smith 264268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 26435dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2644d382aafbSBarry Smith 2645d382aafbSBarry Smith /* Reset __FUNCT__ in case the user does not define it themselves */ 2646d382aafbSBarry Smith #undef __FUNCT__ 2647d382aafbSBarry Smith #define __FUNCT__ "User provided function" 2648d382aafbSBarry Smith 2649d382aafbSBarry Smith #endif 2650