xref: /petsc/include/petscsys.h (revision 2981ebdba252c1ab1bebf9afd5693bb0df49865f)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
11*2981ebdbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/
12*2981ebdbSBarry Smith    does not exist and petscconf.h is in the same directory as the other PETSc include files.
13d382aafbSBarry Smith */
14d382aafbSBarry Smith #include "petscconf.h"
15d382aafbSBarry Smith #include "petscfix.h"
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
2873fca5a0SBarry Smith #endif
2973fca5a0SBarry Smith 
30d382aafbSBarry Smith /* ========================================================================== */
31d382aafbSBarry Smith /*
32*2981ebdbSBarry Smith    This facilitates using the C version of PETSc from C++ and the
33e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
34d382aafbSBarry Smith */
35d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
36d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
37d382aafbSBarry Smith #endif
381ec50b02SJed Brown 
391ec50b02SJed Brown #if defined(__cplusplus)
401ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
411ec50b02SJed Brown #else
421ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
431ec50b02SJed Brown #endif
44d382aafbSBarry Smith 
45d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
46da861ed6SJed Brown #define PETSC_EXTERN extern "C"
47d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
48d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
49d382aafbSBarry Smith #else
50da861ed6SJed Brown #define PETSC_EXTERN extern
51d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
52d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
53d382aafbSBarry Smith #endif
54d382aafbSBarry Smith /* ========================================================================== */
55d382aafbSBarry Smith /*
56d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
57d382aafbSBarry Smith     Web page
58d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
59d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
60d382aafbSBarry Smith     src/docs/website/index.html.
61d382aafbSBarry Smith */
62d382aafbSBarry Smith #include "petscversion.h"
63301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
64d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
65301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
66d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
67301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
68d382aafbSBarry Smith #else
69301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
70301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
71d382aafbSBarry Smith #endif
72d382aafbSBarry Smith 
73d382aafbSBarry Smith /*MC
74d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
75d382aafbSBarry Smith 
76d382aafbSBarry Smith     Input Parameter:
77d382aafbSBarry Smith .   len - length of the string
78d382aafbSBarry Smith 
79d382aafbSBarry Smith     Output Parameter:
80d382aafbSBarry Smith .   version - version string
81d382aafbSBarry Smith 
82d382aafbSBarry Smith     Level: developer
83d382aafbSBarry Smith 
84d382aafbSBarry Smith     Usage:
85d382aafbSBarry Smith     char version[256];
86d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
87d382aafbSBarry Smith 
88d382aafbSBarry Smith     Fortran Note:
89d382aafbSBarry Smith     This routine is not supported in Fortran.
90d382aafbSBarry Smith 
91d382aafbSBarry Smith .seealso: PetscGetProgramName()
92d382aafbSBarry Smith 
93d382aafbSBarry Smith M*/
94d382aafbSBarry Smith 
95d382aafbSBarry Smith /* ========================================================================== */
96d382aafbSBarry Smith 
97d382aafbSBarry Smith /*
98d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
99d382aafbSBarry Smith 
100d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
101d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
102d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
103d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
104d382aafbSBarry Smith     mpicxx.h directly in their code
105d382aafbSBarry Smith */
106d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
107d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
108d382aafbSBarry Smith #include "mpi.h"
10965013866SBarry Smith 
110d382aafbSBarry Smith /*
111*2981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
112d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
113d382aafbSBarry Smith */
114d382aafbSBarry Smith #include <stdio.h>
115d382aafbSBarry Smith 
116d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
117d382aafbSBarry Smith #if !defined(MPIAPI)
118d382aafbSBarry Smith #define MPIAPI
119d382aafbSBarry Smith #endif
120d382aafbSBarry Smith 
121b3506946SBarry Smith 
122d382aafbSBarry Smith /*MC
123d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
124d382aafbSBarry Smith 
125d382aafbSBarry Smith     Level: beginner
126d382aafbSBarry Smith 
127d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
128d382aafbSBarry Smith M*/
129d382aafbSBarry Smith typedef int PetscErrorCode;
130d382aafbSBarry Smith 
131d382aafbSBarry Smith /*MC
132d382aafbSBarry Smith 
133503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
134d382aafbSBarry Smith          (internal integer in the data structure used for error
135*2981ebdbSBarry Smith          checking). These are all computed by an offset from the lowest
1360700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
137d382aafbSBarry Smith 
138d382aafbSBarry Smith     Level: advanced
139d382aafbSBarry Smith 
1400700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
141d382aafbSBarry Smith M*/
1420700a824SBarry Smith typedef int PetscClassId;
143d382aafbSBarry Smith 
144d382aafbSBarry Smith 
145d382aafbSBarry Smith /*MC
146d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
147d382aafbSBarry Smith 
148d382aafbSBarry Smith     Level: intermediate
149d382aafbSBarry Smith 
150d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1513b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
152d382aafbSBarry Smith 
1533b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
154*2981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
155d382aafbSBarry Smith 
1563b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
157*2981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
158d382aafbSBarry Smith 
159d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
160d382aafbSBarry Smith 
161d382aafbSBarry Smith M*/
162d382aafbSBarry Smith typedef int PetscMPIInt;
163d382aafbSBarry Smith 
164d382aafbSBarry Smith /*MC
165d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
166d382aafbSBarry Smith 
167d382aafbSBarry Smith     Level: intermediate
168d382aafbSBarry Smith 
169d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
170d382aafbSBarry Smith M*/
171d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
172d382aafbSBarry Smith 
173d382aafbSBarry Smith /*MC
174d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1753b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
176d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
177d382aafbSBarry Smith 
178d382aafbSBarry Smith    Level: intermediate
179d382aafbSBarry Smith 
180d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
181d382aafbSBarry Smith M*/
182f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
183f505b413SSatish Balay typedef long long Petsc64bitInt;
184f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
185236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
186236ed0a3SSatish Balay #else
187f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
188236ed0a3SSatish Balay #endif
189d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
190236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
191d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
192d382aafbSBarry Smith #else
193d382aafbSBarry Smith typedef int PetscInt;
194d382aafbSBarry Smith #define MPIU_INT MPI_INT
195d382aafbSBarry Smith #endif
196236ed0a3SSatish Balay 
197d382aafbSBarry Smith 
198702bc34aSSatish Balay /*MC
199702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
200702bc34aSSatish Balay 
201702bc34aSSatish Balay     Level: intermediate
202702bc34aSSatish Balay 
203702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
204702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
205702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
206702bc34aSSatish Balay 
207702bc34aSSatish Balay     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
208*2981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
209702bc34aSSatish Balay 
210702bc34aSSatish Balay     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
211*2981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
212702bc34aSSatish Balay 
213*2981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
214702bc34aSSatish Balay      if you run ./configure with the option
215702bc34aSSatish Balay      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
216*2981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
217*2981ebdbSBarry Smith 
218*2981ebdbSBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices
219*2981ebdbSBarry Smith 
220*2981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
221702bc34aSSatish Balay 
222702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
223702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
224702bc34aSSatish Balay 
225702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt
226702bc34aSSatish Balay 
227702bc34aSSatish Balay M*/
228702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
229702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt;
230702bc34aSSatish Balay #else
231702bc34aSSatish Balay typedef int PetscBLASInt;
232702bc34aSSatish Balay #endif
233702bc34aSSatish Balay 
23458b60935SBarry Smith /*EC
23558b60935SBarry Smith 
236*2981ebdbSBarry Smith     PetscPrecision - indicates what precision the object is using. This is currently not used.
23758b60935SBarry Smith 
23858b60935SBarry Smith     Level: advanced
23958b60935SBarry Smith 
24058b60935SBarry Smith .seealso: PetscObjectSetPrecision()
24158b60935SBarry Smith E*/
24258b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
24358b60935SBarry Smith extern const char *PetscPrecisions[];
24458b60935SBarry Smith 
245503cfb0cSBarry Smith /*
246503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
247503cfb0cSBarry Smith */
248d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
249d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
250d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
251d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
252d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
253d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
254d382aafbSBarry Smith #else
255d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
256d382aafbSBarry Smith #endif
257d382aafbSBarry Smith 
258d382aafbSBarry Smith 
259d382aafbSBarry Smith /*
260d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
261d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
262d382aafbSBarry Smith */
263d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
264d382aafbSBarry Smith 
265d382aafbSBarry Smith /*
266d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
267d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
268d382aafbSBarry Smith */
269d382aafbSBarry Smith extern FILE* PETSC_STDERR;
270d382aafbSBarry Smith 
271d382aafbSBarry Smith /*MC
272d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
273d382aafbSBarry Smith 
274d382aafbSBarry Smith     Synopsis:
275ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
276d382aafbSBarry Smith 
277eca87e8dSBarry Smith     Not Collective
278eca87e8dSBarry Smith 
279d382aafbSBarry Smith     Input Parameters:
280d382aafbSBarry Smith .   cond - condition or expression
281d382aafbSBarry Smith 
282d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
283d382aafbSBarry Smith     branch is unlikely.
284d382aafbSBarry Smith 
285d382aafbSBarry Smith     Level: advanced
286d382aafbSBarry Smith 
287d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
288d382aafbSBarry Smith M*/
289d382aafbSBarry Smith 
290d382aafbSBarry Smith /*MC
291d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
292d382aafbSBarry Smith 
293d382aafbSBarry Smith     Synopsis:
294ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
295d382aafbSBarry Smith 
296eca87e8dSBarry Smith     Not Collective
297eca87e8dSBarry Smith 
298d382aafbSBarry Smith     Input Parameters:
299d382aafbSBarry Smith .   cond - condition or expression
300d382aafbSBarry Smith 
301d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
302d382aafbSBarry Smith     branch is likely.
303d382aafbSBarry Smith 
304d382aafbSBarry Smith     Level: advanced
305d382aafbSBarry Smith 
306d382aafbSBarry Smith .seealso: PetscUnlikely()
307d382aafbSBarry Smith M*/
308d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
309d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
310d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
311d382aafbSBarry Smith #else
312cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
313cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
314d382aafbSBarry Smith #endif
315d382aafbSBarry Smith 
316d382aafbSBarry Smith /*
317d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
318d382aafbSBarry Smith */
319d382aafbSBarry Smith #include "petscmath.h"
320d382aafbSBarry Smith 
321d382aafbSBarry Smith /*
322d382aafbSBarry Smith     Declare extern C stuff after including external header files
323d382aafbSBarry Smith */
324d382aafbSBarry Smith 
325d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
326d382aafbSBarry Smith 
327d382aafbSBarry Smith /*
328d382aafbSBarry Smith        Basic PETSc constants
329d382aafbSBarry Smith */
330d382aafbSBarry Smith 
331d382aafbSBarry Smith /*E
332ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
333d382aafbSBarry Smith 
334d382aafbSBarry Smith    Level: beginner
335d382aafbSBarry Smith 
336ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
33734e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
33834e82e7dSBarry Smith 
339d382aafbSBarry Smith E*/
340ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
341ace3abfcSBarry Smith extern const char *PetscBools[];
34270b3c8c7SBarry Smith 
34370b3c8c7SBarry Smith /*E
34470b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
34570b3c8c7SBarry Smith 
34670b3c8c7SBarry Smith    Level: beginner
34770b3c8c7SBarry Smith 
34870b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
34970b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
35070b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
35170b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
35270b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
35370b3c8c7SBarry Smith 
35470b3c8c7SBarry Smith E*/
35570b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
35670b3c8c7SBarry Smith extern const char *PetscCopyModes[];
357d382aafbSBarry Smith 
358d382aafbSBarry Smith /*MC
359ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
360d382aafbSBarry Smith 
361d382aafbSBarry Smith     Level: beginner
362d382aafbSBarry Smith 
363d382aafbSBarry Smith     Note: Zero integer
364d382aafbSBarry Smith 
365ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
366d382aafbSBarry Smith M*/
367d382aafbSBarry Smith 
368d382aafbSBarry Smith /*MC
369ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
370d382aafbSBarry Smith 
371d382aafbSBarry Smith     Level: beginner
372d382aafbSBarry Smith 
373d382aafbSBarry Smith     Note: Nonzero integer
374d382aafbSBarry Smith 
375ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
376d382aafbSBarry Smith M*/
377d382aafbSBarry Smith 
378d382aafbSBarry Smith /*MC
379d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
380d382aafbSBarry Smith 
381d382aafbSBarry Smith    Level: beginner
382d382aafbSBarry Smith 
383d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
384d382aafbSBarry Smith           some default
385d382aafbSBarry Smith 
386d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
387503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
388d382aafbSBarry Smith 
38934e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
39034e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
39134e82e7dSBarry Smith 
392d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
393d382aafbSBarry Smith 
394d382aafbSBarry Smith M*/
395d382aafbSBarry Smith #define PETSC_NULL           0
396d382aafbSBarry Smith 
397d382aafbSBarry Smith /*MC
398d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
399d382aafbSBarry Smith 
400d382aafbSBarry Smith    Level: beginner
401d382aafbSBarry Smith 
402d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
403d382aafbSBarry Smith           some default
404d382aafbSBarry Smith 
405d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
406d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
407d382aafbSBarry Smith 
408d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
409d382aafbSBarry Smith 
410d382aafbSBarry Smith M*/
411d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
412d382aafbSBarry Smith 
413d382aafbSBarry Smith /*MC
414557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
415557d4da8SBarry Smith        where you wish PETSc to use the default.
416557d4da8SBarry Smith 
417557d4da8SBarry Smith    Level: beginner
418557d4da8SBarry Smith 
419557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
420557d4da8SBarry Smith 
421557d4da8SBarry Smith M*/
422557d4da8SBarry Smith #define PETSC_DECIDE  -1
423557d4da8SBarry Smith 
424557d4da8SBarry Smith /*MC
425d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
426d382aafbSBarry Smith        where you wish PETSc to compute the required value.
427d382aafbSBarry Smith 
428d382aafbSBarry Smith    Level: beginner
429d382aafbSBarry Smith 
430557d4da8SBarry Smith 
431557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
432557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
433557d4da8SBarry Smith 
434d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
435d382aafbSBarry Smith 
436d382aafbSBarry Smith M*/
437d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
438d382aafbSBarry Smith 
439d382aafbSBarry Smith /*MC
440557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
441557d4da8SBarry Smith        where you wish PETSc to use the default.
442557d4da8SBarry Smith 
443557d4da8SBarry Smith    Level: beginner
444557d4da8SBarry Smith 
445557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
446557d4da8SBarry Smith 
447557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
448557d4da8SBarry Smith 
449557d4da8SBarry Smith M*/
450557d4da8SBarry Smith #define PETSC_DEFAULT  -2
451557d4da8SBarry Smith 
452557d4da8SBarry Smith /*MC
453d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
454d382aafbSBarry Smith            all the processs that PETSc knows about.
455d382aafbSBarry Smith 
456d382aafbSBarry Smith    Level: beginner
457d382aafbSBarry Smith 
458d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
459d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
460d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
461d382aafbSBarry Smith           PetscInitialize()
462d382aafbSBarry Smith 
463d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
464d382aafbSBarry Smith 
465d382aafbSBarry Smith M*/
466d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
467d382aafbSBarry Smith 
468d382aafbSBarry Smith /*MC
469503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
470d382aafbSBarry Smith 
471d382aafbSBarry Smith    Level: beginner
472d382aafbSBarry Smith 
473d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
474d382aafbSBarry Smith 
475d382aafbSBarry Smith M*/
476d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
477d382aafbSBarry Smith 
4787087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
4797087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
4808b5db460SBarry Smith extern  PetscBool  PetscCUSPSynchronize;
481d382aafbSBarry Smith 
4827087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
4837087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
4847087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
485d382aafbSBarry Smith 
486d382aafbSBarry Smith /*MC
487d382aafbSBarry Smith    PetscMalloc - Allocates memory
488d382aafbSBarry Smith 
489eca87e8dSBarry Smith    Synopsis:
490eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
491eca87e8dSBarry Smith 
492eca87e8dSBarry Smith    Not Collective
493eca87e8dSBarry Smith 
494d382aafbSBarry Smith    Input Parameter:
495d382aafbSBarry Smith .  m - number of bytes to allocate
496d382aafbSBarry Smith 
497d382aafbSBarry Smith    Output Parameter:
498d382aafbSBarry Smith .  result - memory allocated
499d382aafbSBarry Smith 
500d382aafbSBarry Smith    Level: beginner
501d382aafbSBarry Smith 
502d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
503d382aafbSBarry Smith 
504d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
505d382aafbSBarry Smith           properly handle not freeing the null pointer.
506d382aafbSBarry Smith 
507d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
508d382aafbSBarry Smith 
509d382aafbSBarry Smith   Concepts: memory allocation
510d382aafbSBarry Smith 
511d382aafbSBarry Smith M*/
5122714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
513d382aafbSBarry Smith 
514d382aafbSBarry Smith /*MC
515503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
516d382aafbSBarry Smith 
517d382aafbSBarry Smith    Synopsis:
518d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
519d382aafbSBarry Smith 
520eca87e8dSBarry Smith    Not Collective
521eca87e8dSBarry Smith 
522eca87e8dSBarry Smith    Input Parameters:
523eca87e8dSBarry Smith .  addr - address to align (any pointer type)
524eca87e8dSBarry Smith 
525d382aafbSBarry Smith    Level: developer
526d382aafbSBarry Smith 
527d382aafbSBarry Smith .seealso: PetscMallocAlign()
528d382aafbSBarry Smith 
529d382aafbSBarry Smith   Concepts: memory allocation
530d382aafbSBarry Smith M*/
531d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
532d382aafbSBarry Smith 
533d382aafbSBarry Smith /*MC
534503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
535d382aafbSBarry Smith 
536eca87e8dSBarry Smith    Synopsis:
537eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
538eca87e8dSBarry Smith 
539eca87e8dSBarry Smith    Not Collective
540eca87e8dSBarry Smith 
541d382aafbSBarry Smith    Input Parameter:
542d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
543d382aafbSBarry Smith .  t1 - type of first memory elements
544d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
545d382aafbSBarry Smith -  t2 - type of second memory elements
546d382aafbSBarry Smith 
547d382aafbSBarry Smith    Output Parameter:
548d382aafbSBarry Smith +  r1 - memory allocated in first chunk
549d382aafbSBarry Smith -  r2 - memory allocated in second chunk
550d382aafbSBarry Smith 
551d382aafbSBarry Smith    Level: developer
552d382aafbSBarry Smith 
553d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
554d382aafbSBarry Smith 
555d382aafbSBarry Smith   Concepts: memory allocation
556d382aafbSBarry Smith 
557d382aafbSBarry Smith M*/
558d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
559d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
560d382aafbSBarry Smith #else
561*2981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
562d382aafbSBarry Smith #endif
563d382aafbSBarry Smith 
564d382aafbSBarry Smith /*MC
565503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
566d382aafbSBarry Smith 
567eca87e8dSBarry Smith    Synopsis:
568eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
569eca87e8dSBarry Smith 
570eca87e8dSBarry Smith    Not Collective
571eca87e8dSBarry Smith 
572d382aafbSBarry Smith    Input Parameter:
573d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
574d382aafbSBarry Smith .  t1 - type of first memory elements
575d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
576d382aafbSBarry Smith .  t2 - type of second memory elements
577d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
578d382aafbSBarry Smith -  t3 - type of third memory elements
579d382aafbSBarry Smith 
580d382aafbSBarry Smith    Output Parameter:
581d382aafbSBarry Smith +  r1 - memory allocated in first chunk
582d382aafbSBarry Smith .  r2 - memory allocated in second chunk
583d382aafbSBarry Smith -  r3 - memory allocated in third chunk
584d382aafbSBarry Smith 
585d382aafbSBarry Smith    Level: developer
586d382aafbSBarry Smith 
587d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
588d382aafbSBarry Smith 
589d382aafbSBarry Smith   Concepts: memory allocation
590d382aafbSBarry Smith 
591d382aafbSBarry Smith M*/
592d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
593d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
594d382aafbSBarry Smith #else
5953b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
596d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
597d382aafbSBarry Smith #endif
598d382aafbSBarry Smith 
599d382aafbSBarry Smith /*MC
600503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
601d382aafbSBarry Smith 
602eca87e8dSBarry Smith    Synopsis:
603eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
604eca87e8dSBarry Smith 
605eca87e8dSBarry Smith    Not Collective
606eca87e8dSBarry Smith 
607d382aafbSBarry Smith    Input Parameter:
608d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
609d382aafbSBarry Smith .  t1 - type of first memory elements
610d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
611d382aafbSBarry Smith .  t2 - type of second memory elements
612d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
613d382aafbSBarry Smith .  t3 - type of third memory elements
614d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
615d382aafbSBarry Smith -  t4 - type of fourth memory elements
616d382aafbSBarry Smith 
617d382aafbSBarry Smith    Output Parameter:
618d382aafbSBarry Smith +  r1 - memory allocated in first chunk
619d382aafbSBarry Smith .  r2 - memory allocated in second chunk
620d382aafbSBarry Smith .  r3 - memory allocated in third chunk
621d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
622d382aafbSBarry Smith 
623d382aafbSBarry Smith    Level: developer
624d382aafbSBarry Smith 
625d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
626d382aafbSBarry Smith 
627d382aafbSBarry Smith   Concepts: memory allocation
628d382aafbSBarry Smith 
629d382aafbSBarry Smith M*/
630d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
631d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
632d382aafbSBarry Smith #else
633d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6343b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
635d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
636d382aafbSBarry Smith #endif
637d382aafbSBarry Smith 
638d382aafbSBarry Smith /*MC
639503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
640d382aafbSBarry Smith 
641eca87e8dSBarry Smith    Synopsis:
642eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
643eca87e8dSBarry Smith 
644eca87e8dSBarry Smith    Not Collective
645eca87e8dSBarry Smith 
646d382aafbSBarry Smith    Input Parameter:
647d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
648d382aafbSBarry Smith .  t1 - type of first memory elements
649d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
650d382aafbSBarry Smith .  t2 - type of second memory elements
651d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
652d382aafbSBarry Smith .  t3 - type of third memory elements
653d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
654d382aafbSBarry Smith .  t4 - type of fourth memory elements
655d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
656d382aafbSBarry Smith -  t5 - type of fifth memory elements
657d382aafbSBarry Smith 
658d382aafbSBarry Smith    Output Parameter:
659d382aafbSBarry Smith +  r1 - memory allocated in first chunk
660d382aafbSBarry Smith .  r2 - memory allocated in second chunk
661d382aafbSBarry Smith .  r3 - memory allocated in third chunk
662d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
663d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
664d382aafbSBarry Smith 
665d382aafbSBarry Smith    Level: developer
666d382aafbSBarry Smith 
667d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
668d382aafbSBarry Smith 
669d382aafbSBarry Smith   Concepts: memory allocation
670d382aafbSBarry Smith 
671d382aafbSBarry Smith M*/
672d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
673d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
674d382aafbSBarry Smith #else
675d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
6763b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
677d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
678d382aafbSBarry Smith #endif
679d382aafbSBarry Smith 
680d382aafbSBarry Smith 
681d382aafbSBarry Smith /*MC
682503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
683d382aafbSBarry Smith 
684eca87e8dSBarry Smith    Synopsis:
685eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
686eca87e8dSBarry Smith 
687eca87e8dSBarry Smith    Not Collective
688eca87e8dSBarry Smith 
689d382aafbSBarry Smith    Input Parameter:
690d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
691d382aafbSBarry Smith .  t1 - type of first memory elements
692d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
693d382aafbSBarry Smith .  t2 - type of second memory elements
694d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
695d382aafbSBarry Smith .  t3 - type of third memory elements
696d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
697d382aafbSBarry Smith .  t4 - type of fourth memory elements
698d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
699d382aafbSBarry Smith .  t5 - type of fifth memory elements
700d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
701d382aafbSBarry Smith -  t6 - type of sixth memory elements
702d382aafbSBarry Smith 
703d382aafbSBarry Smith    Output Parameter:
704d382aafbSBarry Smith +  r1 - memory allocated in first chunk
705d382aafbSBarry Smith .  r2 - memory allocated in second chunk
706d382aafbSBarry Smith .  r3 - memory allocated in third chunk
707d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
708d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
709d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
710d382aafbSBarry Smith 
711d382aafbSBarry Smith    Level: developer
712d382aafbSBarry Smith 
713d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
714d382aafbSBarry Smith 
715d382aafbSBarry Smith   Concepts: memory allocation
716d382aafbSBarry Smith 
717d382aafbSBarry Smith M*/
718d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
719d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
720d382aafbSBarry Smith #else
721d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7223b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
723d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
724d382aafbSBarry Smith #endif
725d382aafbSBarry Smith 
726d382aafbSBarry Smith /*MC
727503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
728d382aafbSBarry Smith 
729eca87e8dSBarry Smith    Synopsis:
730eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
731eca87e8dSBarry Smith 
732eca87e8dSBarry Smith    Not Collective
733eca87e8dSBarry Smith 
734d382aafbSBarry Smith    Input Parameter:
735d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
736d382aafbSBarry Smith .  t1 - type of first memory elements
737d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
738d382aafbSBarry Smith .  t2 - type of second memory elements
739d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
740d382aafbSBarry Smith .  t3 - type of third memory elements
741d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
742d382aafbSBarry Smith .  t4 - type of fourth memory elements
743d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
744d382aafbSBarry Smith .  t5 - type of fifth memory elements
745d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
746d382aafbSBarry Smith .  t6 - type of sixth memory elements
747d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
748d382aafbSBarry Smith -  t7 - type of sixth memory elements
749d382aafbSBarry Smith 
750d382aafbSBarry Smith    Output Parameter:
751d382aafbSBarry Smith +  r1 - memory allocated in first chunk
752d382aafbSBarry Smith .  r2 - memory allocated in second chunk
753d382aafbSBarry Smith .  r3 - memory allocated in third chunk
754d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
755d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
756d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
757eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
758d382aafbSBarry Smith 
759d382aafbSBarry Smith    Level: developer
760d382aafbSBarry Smith 
761d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
762d382aafbSBarry Smith 
763d382aafbSBarry Smith   Concepts: memory allocation
764d382aafbSBarry Smith 
765d382aafbSBarry Smith M*/
766d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
767d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
768d382aafbSBarry Smith #else
769d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
7703b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
771d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
772d382aafbSBarry Smith #endif
773d382aafbSBarry Smith 
774d382aafbSBarry Smith /*MC
775503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
776d382aafbSBarry Smith 
777eca87e8dSBarry Smith    Synopsis:
778eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
779eca87e8dSBarry Smith 
780eca87e8dSBarry Smith    Not Collective
781eca87e8dSBarry Smith 
782d382aafbSBarry Smith    Input Parameter:
783d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
784d382aafbSBarry Smith 
785d382aafbSBarry Smith    Output Parameter:
786d382aafbSBarry Smith .  result - memory allocated
787d382aafbSBarry Smith 
788d382aafbSBarry Smith    Level: beginner
789d382aafbSBarry Smith 
790ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
791d382aafbSBarry Smith 
792d382aafbSBarry Smith   Concepts: memory allocation
793d382aafbSBarry Smith 
794d382aafbSBarry Smith M*/
795d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
796ad0619ddSBarry Smith 
797ad0619ddSBarry Smith /*MC
798ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
799ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
800ad0619ddSBarry Smith 
801ad0619ddSBarry Smith    Synopsis:
802ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
803ad0619ddSBarry Smith 
804ad0619ddSBarry Smith    Not Collective
805ad0619ddSBarry Smith 
806ad0619ddSBarry Smith    Input Parameter:
807ad0619ddSBarry Smith +  obj - object memory is logged to
808ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
809ad0619ddSBarry Smith 
810ad0619ddSBarry Smith    Output Parameter:
811ad0619ddSBarry Smith .  result - memory allocated
812ad0619ddSBarry Smith 
813ad0619ddSBarry Smith    Level: developer
814ad0619ddSBarry Smith 
815ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
816ad0619ddSBarry Smith 
817ad0619ddSBarry Smith   Concepts: memory allocation
818ad0619ddSBarry Smith 
819ad0619ddSBarry Smith M*/
820d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
821d382aafbSBarry Smith 
822d382aafbSBarry Smith /*MC
823d382aafbSBarry Smith    PetscFree - Frees memory
824d382aafbSBarry Smith 
825eca87e8dSBarry Smith    Synopsis:
826eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
827eca87e8dSBarry Smith 
828eca87e8dSBarry Smith    Not Collective
829eca87e8dSBarry Smith 
830d382aafbSBarry Smith    Input Parameter:
831d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
832d382aafbSBarry Smith 
833d382aafbSBarry Smith    Level: beginner
834d382aafbSBarry Smith 
835d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
836d382aafbSBarry Smith 
837d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
838d382aafbSBarry Smith 
839d382aafbSBarry Smith   Concepts: memory allocation
840d382aafbSBarry Smith 
841d382aafbSBarry Smith M*/
84212537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
843d382aafbSBarry Smith 
844d382aafbSBarry Smith /*MC
845d382aafbSBarry Smith    PetscFreeVoid - Frees memory
846d382aafbSBarry Smith 
847d382aafbSBarry Smith    Synopsis:
848d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
849d382aafbSBarry Smith 
850eca87e8dSBarry Smith    Not Collective
851eca87e8dSBarry Smith 
852eca87e8dSBarry Smith    Input Parameter:
853eca87e8dSBarry Smith .   memory - memory to free
854eca87e8dSBarry Smith 
855d382aafbSBarry Smith    Level: beginner
856d382aafbSBarry Smith 
857d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
858d382aafbSBarry Smith 
859d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
860d382aafbSBarry Smith 
861d382aafbSBarry Smith   Concepts: memory allocation
862d382aafbSBarry Smith 
863d382aafbSBarry Smith M*/
8642714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
865d382aafbSBarry Smith 
866d382aafbSBarry Smith 
867d382aafbSBarry Smith /*MC
868d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
869d382aafbSBarry Smith 
870eca87e8dSBarry Smith    Synopsis:
871eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
872eca87e8dSBarry Smith 
873eca87e8dSBarry Smith    Not Collective
874eca87e8dSBarry Smith 
875d382aafbSBarry Smith    Input Parameter:
876d382aafbSBarry Smith +   memory1 - memory to free
877d382aafbSBarry Smith -   memory2 - 2nd memory to free
878d382aafbSBarry Smith 
879d382aafbSBarry Smith    Level: developer
880d382aafbSBarry Smith 
881d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
882d382aafbSBarry Smith 
883d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
884d382aafbSBarry Smith 
885d382aafbSBarry Smith   Concepts: memory allocation
886d382aafbSBarry Smith 
887d382aafbSBarry Smith M*/
888d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
889d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
890d382aafbSBarry Smith #else
89181dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
892d382aafbSBarry Smith #endif
893d382aafbSBarry Smith 
894d382aafbSBarry Smith /*MC
895d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
896d382aafbSBarry Smith 
897eca87e8dSBarry Smith    Synopsis:
898eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
899eca87e8dSBarry Smith 
900eca87e8dSBarry Smith    Not Collective
901eca87e8dSBarry Smith 
902d382aafbSBarry Smith    Input Parameter:
903d382aafbSBarry Smith +   memory1 - memory to free
904d382aafbSBarry Smith .   memory2 - 2nd memory to free
905d382aafbSBarry Smith -   memory3 - 3rd memory to free
906d382aafbSBarry Smith 
907d382aafbSBarry Smith    Level: developer
908d382aafbSBarry Smith 
909d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
910d382aafbSBarry Smith 
911d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
912d382aafbSBarry Smith 
913d382aafbSBarry Smith   Concepts: memory allocation
914d382aafbSBarry Smith 
915d382aafbSBarry Smith M*/
916d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
917d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
918d382aafbSBarry Smith #else
91981dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
920d382aafbSBarry Smith #endif
921d382aafbSBarry Smith 
922d382aafbSBarry Smith /*MC
923d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
924d382aafbSBarry Smith 
925eca87e8dSBarry Smith    Synopsis:
926eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
927eca87e8dSBarry Smith 
928eca87e8dSBarry Smith    Not Collective
929eca87e8dSBarry Smith 
930d382aafbSBarry Smith    Input Parameter:
931d382aafbSBarry Smith +   m1 - memory to free
932d382aafbSBarry Smith .   m2 - 2nd memory to free
933d382aafbSBarry Smith .   m3 - 3rd memory to free
934d382aafbSBarry Smith -   m4 - 4th memory to free
935d382aafbSBarry Smith 
936d382aafbSBarry Smith    Level: developer
937d382aafbSBarry Smith 
938d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
939d382aafbSBarry Smith 
940d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
941d382aafbSBarry Smith 
942d382aafbSBarry Smith   Concepts: memory allocation
943d382aafbSBarry Smith 
944d382aafbSBarry Smith M*/
945d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
946d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
947d382aafbSBarry Smith #else
94881dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
949d382aafbSBarry Smith #endif
950d382aafbSBarry Smith 
951d382aafbSBarry Smith /*MC
952d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
953d382aafbSBarry Smith 
954eca87e8dSBarry Smith    Synopsis:
955eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
956eca87e8dSBarry Smith 
957eca87e8dSBarry Smith    Not Collective
958eca87e8dSBarry Smith 
959d382aafbSBarry Smith    Input Parameter:
960d382aafbSBarry Smith +   m1 - memory to free
961d382aafbSBarry Smith .   m2 - 2nd memory to free
962d382aafbSBarry Smith .   m3 - 3rd memory to free
963d382aafbSBarry Smith .   m4 - 4th memory to free
964d382aafbSBarry Smith -   m5 - 5th memory to free
965d382aafbSBarry Smith 
966d382aafbSBarry Smith    Level: developer
967d382aafbSBarry Smith 
968d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
969d382aafbSBarry Smith 
970d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
971d382aafbSBarry Smith 
972d382aafbSBarry Smith   Concepts: memory allocation
973d382aafbSBarry Smith 
974d382aafbSBarry Smith M*/
975d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
976d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
977d382aafbSBarry Smith #else
97881dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
979d382aafbSBarry Smith #endif
980d382aafbSBarry Smith 
981d382aafbSBarry Smith 
982d382aafbSBarry Smith /*MC
983d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
984d382aafbSBarry Smith 
985eca87e8dSBarry Smith    Synopsis:
986eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
987eca87e8dSBarry Smith 
988eca87e8dSBarry Smith    Not Collective
989eca87e8dSBarry Smith 
990d382aafbSBarry Smith    Input Parameter:
991d382aafbSBarry Smith +   m1 - memory to free
992d382aafbSBarry Smith .   m2 - 2nd memory to free
993d382aafbSBarry Smith .   m3 - 3rd memory to free
994d382aafbSBarry Smith .   m4 - 4th memory to free
995d382aafbSBarry Smith .   m5 - 5th memory to free
996d382aafbSBarry Smith -   m6 - 6th memory to free
997d382aafbSBarry Smith 
998d382aafbSBarry Smith 
999d382aafbSBarry Smith    Level: developer
1000d382aafbSBarry Smith 
1001d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1002d382aafbSBarry Smith 
1003d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1004d382aafbSBarry Smith 
1005d382aafbSBarry Smith   Concepts: memory allocation
1006d382aafbSBarry Smith 
1007d382aafbSBarry Smith M*/
1008d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1009d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1010d382aafbSBarry Smith #else
101181dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1012d382aafbSBarry Smith #endif
1013d382aafbSBarry Smith 
1014d382aafbSBarry Smith /*MC
1015d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1016d382aafbSBarry Smith 
1017eca87e8dSBarry Smith    Synopsis:
1018eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1019eca87e8dSBarry Smith 
1020eca87e8dSBarry Smith    Not Collective
1021eca87e8dSBarry Smith 
1022d382aafbSBarry Smith    Input Parameter:
1023d382aafbSBarry Smith +   m1 - memory to free
1024d382aafbSBarry Smith .   m2 - 2nd memory to free
1025d382aafbSBarry Smith .   m3 - 3rd memory to free
1026d382aafbSBarry Smith .   m4 - 4th memory to free
1027d382aafbSBarry Smith .   m5 - 5th memory to free
1028d382aafbSBarry Smith .   m6 - 6th memory to free
1029d382aafbSBarry Smith -   m7 - 7th memory to free
1030d382aafbSBarry Smith 
1031d382aafbSBarry Smith 
1032d382aafbSBarry Smith    Level: developer
1033d382aafbSBarry Smith 
1034d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1035d382aafbSBarry Smith 
1036d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1037d382aafbSBarry Smith           PetscMalloc7()
1038d382aafbSBarry Smith 
1039d382aafbSBarry Smith   Concepts: memory allocation
1040d382aafbSBarry Smith 
1041d382aafbSBarry Smith M*/
1042d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1043d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1044d382aafbSBarry Smith #else
104581dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1046d382aafbSBarry Smith #endif
1047d382aafbSBarry Smith 
10487087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
10497087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
10507087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
10517087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1052d382aafbSBarry Smith 
1053d382aafbSBarry Smith /*
105466d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1055d382aafbSBarry Smith */
10567087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
10577087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
10587087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
10597087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
10607087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
10617087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
10627087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
106318a2528dSJed Brown extern PetscErrorCode    PetscMallocGetDumpLog(PetscBool*);
1064d382aafbSBarry Smith 
1065d382aafbSBarry Smith /*E
1066d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1067d382aafbSBarry Smith 
1068d382aafbSBarry Smith    Level: beginner
1069d382aafbSBarry Smith 
1070d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1071d382aafbSBarry Smith 
1072d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1073d382aafbSBarry Smith           PetscDataTypeGetSize()
1074d382aafbSBarry Smith 
1075d382aafbSBarry Smith E*/
1076d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
107759a34000SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10} PetscDataType;
1078d382aafbSBarry Smith extern const char *PetscDataTypes[];
1079d382aafbSBarry Smith 
1080d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1081d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1082d382aafbSBarry Smith #else
1083ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1084d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
108559a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
108659a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1087d382aafbSBarry Smith #else
1088d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1089d382aafbSBarry Smith #endif
1090d382aafbSBarry Smith #endif
1091ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1092d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
109359a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
109459a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1095d382aafbSBarry Smith #else
1096d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1097d382aafbSBarry Smith #endif
1098d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1099d382aafbSBarry Smith 
11007087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11017087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11027087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1103d382aafbSBarry Smith 
1104d382aafbSBarry Smith /*
1105d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1106d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1107d382aafbSBarry Smith    functionality and/or error checking.
1108d382aafbSBarry Smith */
11097087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11107087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11117087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11127087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11137087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11147087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11157087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11167087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11177087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11187087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11197087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11207087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11217087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
11227087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
11237087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
11247087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
11257087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
11267087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
11277087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
112874722a09SBarry Smith extern PetscErrorCode    PetscStrendswith(const char[],const char[],PetscBool*);
11297ba3a57cSBarry Smith extern PetscErrorCode    PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
11307087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
11317087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1132d382aafbSBarry Smith 
1133d382aafbSBarry Smith /*S
1134d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1135d382aafbSBarry Smith 
1136d382aafbSBarry Smith   Level: intermediate
1137d382aafbSBarry Smith 
1138d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1139d382aafbSBarry Smith S*/
1140d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1141d382aafbSBarry Smith 
11427087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
11437087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
11448c74ee41SBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken*);
1145d382aafbSBarry Smith 
1146d382aafbSBarry Smith /*
1147d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1148d382aafbSBarry Smith */
11497087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
11502414b3c7SJed Brown #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
1151b0c94c62SJed Brown extern  MPI_Op MPIU_SUM;
11522414b3c7SJed Brown #else
11532414b3c7SJed Brown #define MPIU_SUM MPI_SUM
11542414b3c7SJed Brown #endif
11552414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128)
1156d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1157d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1158d9822059SBarry Smith #else
1159d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1160d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1161d9822059SBarry Smith #endif
11627087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1163d382aafbSBarry Smith 
1164a25532f0SBarry Smith extern PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1165a25532f0SBarry Smith extern PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1166eb3f98d2SBarry Smith 
1167d382aafbSBarry Smith /*S
1168d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1169d382aafbSBarry Smith 
1170d382aafbSBarry Smith    Level: beginner
1171d382aafbSBarry Smith 
1172*2981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1173d382aafbSBarry Smith 
11741890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1175d382aafbSBarry Smith S*/
1176d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1177d382aafbSBarry Smith 
1178d382aafbSBarry Smith /*S
1179d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1180d382aafbSBarry Smith       by string name
1181d382aafbSBarry Smith 
1182d382aafbSBarry Smith    Level: advanced
1183d382aafbSBarry Smith 
1184*2981ebdbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy(), PetscOpFlist
1185d382aafbSBarry Smith S*/
1186d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1187d382aafbSBarry Smith 
1188e4d1774bSDmitry Karpeev /*S
1189e4d1774bSDmitry Karpeev      PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries,
1190e4d1774bSDmitry Karpeev                     accessed by string op name together with string argument types.
1191e4d1774bSDmitry Karpeev 
1192e4d1774bSDmitry Karpeev    Level: advanced
1193e4d1774bSDmitry Karpeev 
1194*2981ebdbSBarry Smith .seealso:  PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy()
1195e4d1774bSDmitry Karpeev S*/
1196e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList;
1197e4d1774bSDmitry Karpeev 
1198d382aafbSBarry Smith /*E
1199d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1200d382aafbSBarry Smith 
1201d382aafbSBarry Smith   Level: beginner
1202d382aafbSBarry Smith 
1203d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1204d382aafbSBarry Smith 
1205d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1206d382aafbSBarry Smith 
1207d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1208d382aafbSBarry Smith 
1209d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1210d382aafbSBarry Smith 
1211d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1212d382aafbSBarry Smith 
1213d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1214d382aafbSBarry Smith E*/
1215d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1216d382aafbSBarry Smith 
1217d382aafbSBarry Smith #include "petscviewer.h"
1218d382aafbSBarry Smith #include "petscoptions.h"
1219d382aafbSBarry Smith 
12200700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12217087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
12227087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
12237087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1224d382aafbSBarry Smith 
1225d382aafbSBarry Smith /*
1226d382aafbSBarry Smith    Routines that get memory usage information from the OS
1227d382aafbSBarry Smith */
12287087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
12297087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
12307087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
12317087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1232d382aafbSBarry Smith 
12337087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
12347087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
12357087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
12367087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1237d382aafbSBarry Smith 
1238d382aafbSBarry Smith /*
1239d382aafbSBarry Smith    Initialization of PETSc
1240d382aafbSBarry Smith */
12417087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
1242*2981ebdbSBarry Smith extern PetscErrorCode  PetscInitializeNoPointers(int,char**,const char[],const char[]);
12437087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
12447087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool *);
12457087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool *);
12467087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
124709573ac7SBarry Smith extern PetscErrorCode  PetscInitializeFortran(void);
12487087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
12497087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
12507087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1251d382aafbSBarry Smith 
12527087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
12537087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1254d382aafbSBarry Smith 
1255d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
125685afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
125785afcc9aSBarry Smith extern PetscErrorCode  PetscHMPISpawn(PetscMPIInt);
125885afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFinalize(void);
125985afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
126085afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
126185afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFree(MPI_Comm,void*);
126285afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMalloc(MPI_Comm,size_t,void**);
1263d382aafbSBarry Smith 
12647087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
12657087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
12667087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
12675180491cSLisandro Dalcin extern PetscErrorCode  PetscPythonMonitorSet(PetscObject,const char[]);
1268d382aafbSBarry Smith 
1269d382aafbSBarry Smith /*
1270d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
1271*2981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1272d382aafbSBarry Smith */
1273d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1274d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1275d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1276d382aafbSBarry Smith 
1277d382aafbSBarry Smith /*
1278d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1279d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1280503cfb0cSBarry Smith 
1281503cfb0cSBarry Smith    Level: developer
1282503cfb0cSBarry Smith 
1283503cfb0cSBarry Smith .seealso: PetscUseMethod()
1284d382aafbSBarry Smith */
1285d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1286d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1287d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1288d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1289d382aafbSBarry Smith   }
1290503cfb0cSBarry Smith 
1291503cfb0cSBarry Smith /*
1292503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1293503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1294503cfb0cSBarry Smith 
1295503cfb0cSBarry Smith    Level: developer
1296503cfb0cSBarry Smith 
1297503cfb0cSBarry Smith .seealso: PetscTryMethod()
1298503cfb0cSBarry Smith */
1299d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1300d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1301d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1302d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1303703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1304d382aafbSBarry Smith   }
1305503cfb0cSBarry Smith 
1306d382aafbSBarry Smith /*
1307d382aafbSBarry Smith     Functions that can act on any PETSc object.
1308d382aafbSBarry Smith */
1309fcfd50ebSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject*);
13107087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13117087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
1312609db0e0SLisandro Dalcin extern PetscErrorCode  PetscObjectGetClassName(PetscObject,const char *[]);
13137087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13147087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13157087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13167087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13177087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13187087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13197087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13207087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
13217087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
13227087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
13237087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
13247087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
13257087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
13267087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
13277087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
13286ba4bc90SBarry Smith extern PetscErrorCode  PetscObjectRemoveReference(PetscObject,const char[]);
13297087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
13307087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
13317087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
13327087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
13337087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
13347087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
13357087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
13367087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
1337d382aafbSBarry Smith 
1338d382aafbSBarry Smith /*MC
1339d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1340d382aafbSBarry Smith 
1341eca87e8dSBarry Smith     Synopsis:
1342eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1343eca87e8dSBarry Smith 
1344ad4df100SBarry Smith    Logically Collective on PetscObject
1345d382aafbSBarry Smith 
1346d382aafbSBarry Smith    Input Parameters:
1347d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1348d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1349d382aafbSBarry Smith .  name - name associated with the child function
1350d382aafbSBarry Smith .  fname - name of the function
1351d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1352d382aafbSBarry Smith 
1353d382aafbSBarry Smith    Level: advanced
1354d382aafbSBarry Smith 
1355d382aafbSBarry Smith 
1356d382aafbSBarry Smith    Notes:
1357d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1358d382aafbSBarry Smith 
1359d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1360d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1361d382aafbSBarry Smith 
1362d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
136320de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1364d382aafbSBarry Smith    enabled.
1365d382aafbSBarry Smith 
1366d382aafbSBarry Smith    Concepts: objects^composing functions
1367d382aafbSBarry Smith    Concepts: composing functions
1368d382aafbSBarry Smith    Concepts: functions^querying
1369d382aafbSBarry Smith    Concepts: objects^querying
1370d382aafbSBarry Smith    Concepts: querying objects
1371d382aafbSBarry Smith 
1372d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1373d382aafbSBarry Smith M*/
1374d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1375d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1376d382aafbSBarry Smith #else
1377d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1378d382aafbSBarry Smith #endif
1379d382aafbSBarry Smith 
13807087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
13817087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
13827087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
13837087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
13847087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
13857087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
13867087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
13877087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
13887087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
13897087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
13907087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
13917087cfbeSBarry Smith extern PetscErrorCode  PetscTypeCompare(PetscObject,const char[],PetscBool *);
13922b12f010SJed Brown extern PetscErrorCode  PetscTypeCompareAny(PetscObject,PetscBool*,const char[],...);
13937087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
13947087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1395d382aafbSBarry Smith 
1396d382aafbSBarry Smith /*
1397d382aafbSBarry Smith     Defines PETSc error handling.
1398d382aafbSBarry Smith */
1399d382aafbSBarry Smith #include "petscerror.h"
1400d382aafbSBarry Smith 
1401d382aafbSBarry Smith /*S
1402503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1403d382aafbSBarry Smith 
14041d0fab5eSBarry Smith    Level: developer
1405d382aafbSBarry Smith 
14061d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14071d0fab5eSBarry Smith 
1408*2981ebdbSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList
1409d382aafbSBarry Smith S*/
1410d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1411d382aafbSBarry Smith 
1412fcfd50ebSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList*);
14137087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
1414bfec8eecSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
14157087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14166ba4bc90SBarry Smith extern PetscErrorCode  PetscOListRemoveReference(PetscOList *,const char[]);
14177087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1418d382aafbSBarry Smith 
1419d382aafbSBarry Smith /*
1420503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1421d382aafbSBarry Smith   link libraries that will be loaded as needed.
1422d382aafbSBarry Smith */
14237087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
14247087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
14254b91b6eaSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
14267087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1427d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1428d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1429d382aafbSBarry Smith #else
1430d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1431d382aafbSBarry Smith #endif
14327087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
14337087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
14347087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
14357087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1436d382aafbSBarry Smith 
143748703020SDmitry Karpeev /*
143848703020SDmitry Karpeev     Multiple dispatch operation function lists. Lists of names of routines with corresponding
143948703020SDmitry Karpeev     argument type names with function pointers or in dynamic link libraries that will be loaded
144048703020SDmitry Karpeev     as needed.  Search on the op name and argument type names.
144148703020SDmitry Karpeev */
14422356f84bSDmitry Karpeev extern PetscErrorCode  PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]);
144348703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListDestroy(PetscOpFList*);
14442356f84bSDmitry Karpeev extern PetscErrorCode  PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]);
144548703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListView(PetscOpFList,PetscViewer);
1446*2981ebdbSBarry Smith 
1447d382aafbSBarry Smith /*S
1448d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1449d382aafbSBarry Smith 
1450d382aafbSBarry Smith    Level: advanced
1451d382aafbSBarry Smith 
145220de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1453d382aafbSBarry Smith 
1454d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1455d382aafbSBarry Smith S*/
1456d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1457d44a1e48SBarry Smith extern PetscDLLibrary  PetscDLLibrariesLoaded;
14587087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
14597087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
14607087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
14617087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
14627087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
14637087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
14647087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
1465d382aafbSBarry Smith 
1466d382aafbSBarry Smith /*
1467a5a3d712SDmitry Karpeev   PetscShell support.  Needs to be better documented.
146805846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
146905846914SDmitry Karpeev */
1470a5a3d712SDmitry Karpeev #include "petscshell.h"
147105846914SDmitry Karpeev 
147205846914SDmitry Karpeev /*
1473d382aafbSBarry Smith      Useful utility routines
1474d382aafbSBarry Smith */
14757087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
14767087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
14777087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
14787087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
14797087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
14807087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1481d382aafbSBarry Smith 
1482503cfb0cSBarry Smith /*
1483ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1484503cfb0cSBarry Smith 
1485503cfb0cSBarry Smith     Notes: This is useful in cases like
1486503cfb0cSBarry Smith $     int        *a;
1487ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1488ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1489503cfb0cSBarry Smith */
1490d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1491503cfb0cSBarry Smith 
1492d382aafbSBarry Smith /*
1493d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1494d382aafbSBarry Smith */
1495d382aafbSBarry Smith #include "petscdraw.h"
1496d382aafbSBarry Smith 
1497d382aafbSBarry Smith /*
1498d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1499d382aafbSBarry Smith */
1500b45d2f2cSJed Brown #include "petsc-private/petscimpl.h"
1501503cfb0cSBarry Smith 
1502238ccf28SShri Abhyankar 
1503d382aafbSBarry Smith /*MC
1504d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1505d382aafbSBarry Smith 
1506d382aafbSBarry Smith    Synopsis:
1507d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1508d382aafbSBarry Smith 
1509eca87e8dSBarry Smith     Not Collective
1510eca87e8dSBarry Smith 
1511d382aafbSBarry Smith     Input Parameters:
1512d382aafbSBarry Smith .   format - the usual printf() format string
1513d382aafbSBarry Smith 
1514d382aafbSBarry Smith    Options Database Keys:
1515d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1516d382aafbSBarry Smith          (default) stderr
1517d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1518d382aafbSBarry Smith           error is handled.)
1519d382aafbSBarry Smith 
1520d382aafbSBarry Smith    Notes: Use
1521d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1522d382aafbSBarry Smith $                        error is handled.) and
1523d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1524c9a19010SBarry Smith $        of you can use your own function
1525d382aafbSBarry Smith 
1526d382aafbSBarry Smith           Use
1527d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1528d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1529d382aafbSBarry Smith 
1530d382aafbSBarry Smith           Use
1531d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1532d382aafbSBarry Smith 
1533d382aafbSBarry Smith    Level: developer
1534d382aafbSBarry Smith 
1535d382aafbSBarry Smith     Fortran Note:
1536d382aafbSBarry Smith     This routine is not supported in Fortran.
1537d382aafbSBarry Smith 
1538d382aafbSBarry Smith     Concepts: error messages^printing
1539d382aafbSBarry Smith     Concepts: printing^error messages
1540d382aafbSBarry Smith 
1541c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1542d382aafbSBarry Smith M*/
15437087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1544d382aafbSBarry Smith 
1545d382aafbSBarry Smith /*MC
1546d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1547d382aafbSBarry Smith 
1548d382aafbSBarry Smith    Synopsis:
1549d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1550d382aafbSBarry Smith 
1551eca87e8dSBarry Smith     Not Collective
1552eca87e8dSBarry Smith 
1553d382aafbSBarry Smith     Input Parameters:
1554d382aafbSBarry Smith .   format - the usual printf() format string
1555d382aafbSBarry Smith 
1556d382aafbSBarry Smith    Level: developer
1557d382aafbSBarry Smith 
1558d382aafbSBarry Smith     Fortran Note:
1559d382aafbSBarry Smith     This routine is not supported in Fortran.
1560d382aafbSBarry Smith 
1561d382aafbSBarry Smith     Concepts: help messages^printing
1562d382aafbSBarry Smith     Concepts: printing^help messages
1563d382aafbSBarry Smith 
1564d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1565d382aafbSBarry Smith M*/
15667087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1567d382aafbSBarry Smith 
1568fcfd50ebSBarry Smith /*
1569fcfd50ebSBarry Smith      Defines PETSc profiling.
1570fcfd50ebSBarry Smith */
1571fcfd50ebSBarry Smith #include "petsclog.h"
1572fcfd50ebSBarry Smith 
1573fcfd50ebSBarry Smith /*
1574fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1575fcfd50ebSBarry Smith */
1576fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1577fcfd50ebSBarry Smith extern PetscBool  PetscAMSPublishAll;
1578fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1579fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1580fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1581fcfd50ebSBarry Smith #else
1582fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1583fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1584fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1585fcfd50ebSBarry Smith #endif
1586fcfd50ebSBarry Smith 
1587fcfd50ebSBarry Smith /*
1588fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1589fcfd50ebSBarry Smith */
1590fcfd50ebSBarry Smith extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1591fcfd50ebSBarry Smith extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1592fcfd50ebSBarry Smith extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1593fcfd50ebSBarry Smith extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1594fcfd50ebSBarry Smith extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1595fcfd50ebSBarry Smith extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1596257d2499SJed Brown extern PetscErrorCode   PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1597fcfd50ebSBarry Smith 
1598fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1599fcfd50ebSBarry Smith #include <stdarg.h>
1600fcfd50ebSBarry Smith extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1601fcfd50ebSBarry Smith extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1602fcfd50ebSBarry Smith extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
1603fcfd50ebSBarry Smith 
1604fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1605fcfd50ebSBarry Smith extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1606fcfd50ebSBarry Smith #endif
1607fcfd50ebSBarry Smith 
160809573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
160909573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
161009573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1611d382aafbSBarry Smith 
1612d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16137087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16147087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1615d382aafbSBarry Smith #endif
1616d382aafbSBarry Smith 
16177087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
16187087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
16197087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
16207087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
16217087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
16227087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
16237087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1624d382aafbSBarry Smith 
16257087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1626d382aafbSBarry Smith 
1627d382aafbSBarry Smith /*S
1628d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1629d382aafbSBarry Smith 
1630d382aafbSBarry Smith    Level: advanced
1631d382aafbSBarry Smith 
1632d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1633d382aafbSBarry Smith S*/
16347087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1635d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
16367087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
16377087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
1638fcfd50ebSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer*);
16397087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
16407087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1641d382aafbSBarry Smith 
1642d382aafbSBarry Smith /*
1643d382aafbSBarry Smith    For use in debuggers
1644d382aafbSBarry Smith */
16457087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
16467087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
16477087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
16487087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
16497087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1650d382aafbSBarry Smith 
1651d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1652d382aafbSBarry Smith #include <memory.h>
1653d382aafbSBarry Smith #endif
1654d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1655d382aafbSBarry Smith #include <stdlib.h>
1656d382aafbSBarry Smith #endif
1657d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1658d382aafbSBarry Smith #include <strings.h>
1659d382aafbSBarry Smith #endif
1660d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1661d382aafbSBarry Smith #include <string.h>
1662d382aafbSBarry Smith #endif
16636c7e564aSBarry Smith 
16644a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1665d382aafbSBarry Smith #include <xmmintrin.h>
1666d382aafbSBarry Smith #endif
1667d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1668d382aafbSBarry Smith #include <stdint.h>
1669d382aafbSBarry Smith #endif
1670d382aafbSBarry Smith 
1671fcfd50ebSBarry Smith #undef __FUNCT__
1672fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1673d382aafbSBarry Smith /*@C
1674d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1675d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1676d382aafbSBarry Smith    PetscMemmove() in that case.
1677d382aafbSBarry Smith 
1678d382aafbSBarry Smith    Not Collective
1679d382aafbSBarry Smith 
1680d382aafbSBarry Smith    Input Parameters:
1681d382aafbSBarry Smith +  b - pointer to initial memory space
1682d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1683d382aafbSBarry Smith 
1684d382aafbSBarry Smith    Output Parameter:
1685d382aafbSBarry Smith .  a - pointer to copy space
1686d382aafbSBarry Smith 
1687d382aafbSBarry Smith    Level: intermediate
1688d382aafbSBarry Smith 
1689d382aafbSBarry Smith    Compile Option:
1690d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1691d382aafbSBarry Smith                                   for memory copies on double precision values.
1692d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1693d382aafbSBarry Smith                                   for memory copies on double precision values.
1694d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1695d382aafbSBarry Smith                                   for memory copies on double precision values.
1696d382aafbSBarry Smith 
1697d382aafbSBarry Smith    Note:
1698d382aafbSBarry Smith    This routine is analogous to memcpy().
1699d382aafbSBarry Smith 
1700503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1701503cfb0cSBarry Smith 
1702d382aafbSBarry Smith   Concepts: memory^copying
1703d382aafbSBarry Smith   Concepts: copying^memory
1704d382aafbSBarry Smith 
1705d382aafbSBarry Smith .seealso: PetscMemmove()
1706d382aafbSBarry Smith 
1707d382aafbSBarry Smith @*/
17087087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1709d382aafbSBarry Smith {
1710d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1711d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1712d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1713a7e36092SMatthew G Knepley   PetscFunctionBegin;
1714e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1715e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1716a7e36092SMatthew G Knepley #else
1717d382aafbSBarry Smith   PetscFunctionBegin;
1718a7e36092SMatthew G Knepley #endif
1719d382aafbSBarry Smith   if (a != b) {
1720d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1721e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1722d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1723d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1724d382aafbSBarry Smith #endif
1725d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1726d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1727d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1728d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1729d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1730d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1731d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1732d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1733d382aafbSBarry Smith #else
1734d382aafbSBarry Smith       size_t      i;
1735d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1736d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1737d382aafbSBarry Smith #endif
1738d382aafbSBarry Smith     } else {
1739d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1740d382aafbSBarry Smith     }
1741d382aafbSBarry Smith #else
1742d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1743d382aafbSBarry Smith #endif
1744d382aafbSBarry Smith   }
1745d382aafbSBarry Smith   PetscFunctionReturn(0);
1746d382aafbSBarry Smith }
1747d382aafbSBarry Smith 
1748d382aafbSBarry Smith /*@C
1749d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1750d382aafbSBarry Smith 
1751d382aafbSBarry Smith    Not Collective
1752d382aafbSBarry Smith 
1753d382aafbSBarry Smith    Input Parameters:
1754d382aafbSBarry Smith +  a - pointer to beginning memory location
1755d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1756d382aafbSBarry Smith 
1757d382aafbSBarry Smith    Level: intermediate
1758d382aafbSBarry Smith 
1759d382aafbSBarry Smith    Compile Option:
1760d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1761d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1762d382aafbSBarry Smith 
1763503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1764503cfb0cSBarry Smith 
1765d382aafbSBarry Smith    Concepts: memory^zeroing
1766d382aafbSBarry Smith    Concepts: zeroing^memory
1767d382aafbSBarry Smith 
1768d382aafbSBarry Smith .seealso: PetscMemcpy()
1769d382aafbSBarry Smith @*/
17707087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1771d382aafbSBarry Smith {
1772d382aafbSBarry Smith   if (n > 0) {
1773d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1774e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1775d382aafbSBarry Smith #endif
1776d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1777d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1778d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1779d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1780d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1781d382aafbSBarry Smith     } else {
1782d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1783d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1784d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1785d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1786d382aafbSBarry Smith     } else {
1787d382aafbSBarry Smith #endif
1788d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1789d382aafbSBarry Smith       bzero((char *)a,n);
1790d382aafbSBarry Smith #else
1791d382aafbSBarry Smith       memset((char*)a,0,n);
1792d382aafbSBarry Smith #endif
1793d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1794d382aafbSBarry Smith     }
1795d382aafbSBarry Smith #endif
1796d382aafbSBarry Smith   }
1797d382aafbSBarry Smith   return 0;
1798d382aafbSBarry Smith }
1799d382aafbSBarry Smith 
1800d382aafbSBarry Smith /*MC
1801d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1802d382aafbSBarry Smith 
1803eca87e8dSBarry Smith    Synopsis:
1804eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1805eca87e8dSBarry Smith 
1806d382aafbSBarry Smith    Not Collective
1807d382aafbSBarry Smith 
1808d382aafbSBarry Smith    Input Parameters:
1809d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1810d382aafbSBarry Smith .  n - number of elements to fetch
1811d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
181250d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1813d382aafbSBarry Smith 
1814d382aafbSBarry Smith    Level: developer
1815d382aafbSBarry Smith 
1816d382aafbSBarry Smith    Notes:
1817d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1818d382aafbSBarry Smith 
181950d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
182050d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
182150d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
182263cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
182363cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
182463cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1825d382aafbSBarry Smith 
1826d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1827d382aafbSBarry Smith    address).
1828d382aafbSBarry Smith 
1829d382aafbSBarry Smith    Concepts: memory
1830d382aafbSBarry Smith M*/
1831d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1832d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1833d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1834d382aafbSBarry Smith   } while (0)
1835d382aafbSBarry Smith 
1836d382aafbSBarry Smith /*
1837e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1838d382aafbSBarry Smith */
1839d382aafbSBarry Smith #include "petscmatlab.h"
1840d382aafbSBarry Smith 
1841d382aafbSBarry Smith /*
1842d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1843d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1844d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1845d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1846e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1847d382aafbSBarry Smith */
1848d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1849d382aafbSBarry Smith 
1850d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1851d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1852d382aafbSBarry Smith #endif
1853d382aafbSBarry Smith 
18545a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18555a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1856d382aafbSBarry Smith #endif
1857d382aafbSBarry Smith 
1858d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1859d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1860d382aafbSBarry Smith #endif
1861d382aafbSBarry Smith 
1862d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1863d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1864d382aafbSBarry Smith #endif
1865d382aafbSBarry Smith 
1866d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1867d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1868d382aafbSBarry Smith #endif
1869d382aafbSBarry Smith 
1870d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1871d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1872d382aafbSBarry Smith #endif
1873d382aafbSBarry Smith 
1874d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1875d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1876d382aafbSBarry Smith #endif
1877d382aafbSBarry Smith 
1878d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1879d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1880d382aafbSBarry Smith #endif
1881d382aafbSBarry Smith 
1882d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1883d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1884d382aafbSBarry Smith #endif
1885d382aafbSBarry Smith 
1886d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1887d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1888d382aafbSBarry Smith #endif
1889d382aafbSBarry Smith 
1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1892d382aafbSBarry Smith #endif
1893d382aafbSBarry Smith 
1894d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1895d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1896d382aafbSBarry Smith #endif
1897d382aafbSBarry Smith 
1898d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1899d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1900d382aafbSBarry Smith #endif
1901d382aafbSBarry Smith 
1902d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1903d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1904d382aafbSBarry Smith #endif
1905d382aafbSBarry Smith 
1906d382aafbSBarry Smith #endif
1907d382aafbSBarry Smith 
1908d382aafbSBarry Smith /*
1909d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1910d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1911d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1912d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1913d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1914d382aafbSBarry Smith */
1915d382aafbSBarry Smith #if defined(__cplusplus)
1916da861ed6SJed Brown #define PETSC_EXTERN_C extern "C"
1917d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1918d382aafbSBarry Smith #define EXTERN_C_END }
1919d382aafbSBarry Smith #else
1920da861ed6SJed Brown #define PETSC_EXTERN_C
1921d382aafbSBarry Smith #define EXTERN_C_BEGIN
1922d382aafbSBarry Smith #define EXTERN_C_END
1923d382aafbSBarry Smith #endif
1924d382aafbSBarry Smith 
1925d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1926d382aafbSBarry Smith 
1927d382aafbSBarry Smith /*MC
1928d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1929d382aafbSBarry Smith         communication
1930d382aafbSBarry Smith 
1931d382aafbSBarry Smith    Level: beginner
1932d382aafbSBarry Smith 
1933d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1934d382aafbSBarry Smith 
1935d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1936d382aafbSBarry Smith M*/
1937d382aafbSBarry Smith 
1938d382aafbSBarry Smith /*MC
1939d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1940d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1941d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1942d382aafbSBarry Smith 
1943d382aafbSBarry Smith 
1944d382aafbSBarry Smith    Level: beginner
1945d382aafbSBarry Smith 
1946d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1947d382aafbSBarry Smith M*/
1948d382aafbSBarry Smith 
1949d382aafbSBarry Smith /*MC
1950d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1951d382aafbSBarry Smith 
1952d382aafbSBarry Smith    Level: beginner
1953d382aafbSBarry Smith 
1954d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1955d382aafbSBarry Smith M*/
1956d382aafbSBarry Smith 
1957d382aafbSBarry Smith /*MC
1958d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1959d382aafbSBarry Smith    Level: beginner
1960d382aafbSBarry Smith 
1961d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1962d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1963d382aafbSBarry Smith 
1964d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1965d382aafbSBarry Smith M*/
1966d382aafbSBarry Smith 
1967d382aafbSBarry Smith /*MC
1968d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
1969d382aafbSBarry Smith 
1970d382aafbSBarry Smith    Level: beginner
1971d382aafbSBarry Smith 
1972d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
1973d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1974d382aafbSBarry Smith 
1975d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
1976d382aafbSBarry Smith M*/
1977d382aafbSBarry Smith 
1978d382aafbSBarry Smith /*MC
1979d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
1980d382aafbSBarry Smith 
1981d382aafbSBarry Smith    Level: beginner
1982d382aafbSBarry Smith 
1983d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
1984d382aafbSBarry Smith           pass this value
1985d382aafbSBarry Smith 
1986d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
1987d382aafbSBarry Smith M*/
1988d382aafbSBarry Smith 
1989d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
1990d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
1991d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1992d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1993d382aafbSBarry Smith #else
1994d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
1995d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
1996d382aafbSBarry Smith #endif
1997d382aafbSBarry Smith #endif
1998d382aafbSBarry Smith 
1999d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2000d382aafbSBarry Smith 
2001d382aafbSBarry Smith /* Limit MPI to 32-bits */
2002d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2003d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2004d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2005d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2006d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2007d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2008d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2009d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2012e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2013e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2014eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2015eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2016d382aafbSBarry Smith 
2017d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2018e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2019eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2020d382aafbSBarry Smith #else
2021d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2022d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2023d382aafbSBarry Smith #endif
2024d382aafbSBarry Smith 
2025d382aafbSBarry Smith #else
2026d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2027d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2028d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2029d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2030d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2031d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2032d382aafbSBarry Smith #endif
2033d382aafbSBarry Smith 
2034d382aafbSBarry Smith /*
2035*2981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2036d382aafbSBarry Smith */
2037d382aafbSBarry Smith #if defined(hz)
2038d382aafbSBarry Smith #undef hz
2039d382aafbSBarry Smith #endif
2040d382aafbSBarry Smith 
2041d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2042d382aafbSBarry Smith 
2043d382aafbSBarry Smith 
2044d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2045d382aafbSBarry Smith #include <limits.h>
2046d382aafbSBarry Smith #endif
2047d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2048d382aafbSBarry Smith #include <sys/param.h>
2049d382aafbSBarry Smith #endif
2050d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2051d382aafbSBarry Smith #include <sys/types.h>
2052d382aafbSBarry Smith #endif
2053d382aafbSBarry Smith #if defined(MAXPATHLEN)
2054d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2055d382aafbSBarry Smith #elif defined(MAX_PATH)
2056d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2057d382aafbSBarry Smith #elif defined(_MAX_PATH)
2058d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2059d382aafbSBarry Smith #else
2060d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2061d382aafbSBarry Smith #endif
2062d382aafbSBarry Smith 
2063d382aafbSBarry Smith /* Special support for C++ */
2064d382aafbSBarry Smith #include "petscsys.hh"
20656c7e564aSBarry Smith 
2066d382aafbSBarry Smith /*MC
2067d382aafbSBarry Smith 
2068d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2069d382aafbSBarry Smith 
2070d382aafbSBarry Smith $    1) classic Fortran 77 style
2071d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2072d382aafbSBarry Smith $       XXX variablename
2073d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2074d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2075d382aafbSBarry Smith $
2076d382aafbSBarry Smith $    2) classic Fortran 90 style
2077d1716517SSatish Balay $#include "finclude/petscXXX.h"
2078d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2079d382aafbSBarry Smith $       XXX variablename
2080d382aafbSBarry Smith $
2081d382aafbSBarry Smith $    3) Using Fortran modules
2082d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2083d382aafbSBarry Smith $         use petscXXXX
2084d382aafbSBarry Smith $       XXX variablename
2085d382aafbSBarry Smith $
2086d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2087d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2088d382aafbSBarry Smith $         use petscXXXX
2089d382aafbSBarry Smith $       type(XXX) variablename
2090e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2091d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2092d382aafbSBarry Smith 
2093d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2094d382aafbSBarry Smith 
2095d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2096d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2097d382aafbSBarry Smith $        integer variablename
2098d382aafbSBarry Smith $
2099d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2100d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2101d382aafbSBarry Smith 
2102d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2103d382aafbSBarry Smith for only a few PETSc functions.
2104d382aafbSBarry Smith 
2105d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2106d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2107d382aafbSBarry Smith you cannot have something like
2108d382aafbSBarry Smith $      PetscInt row,col
2109d382aafbSBarry Smith $      PetscScalar val
2110d382aafbSBarry Smith $        ...
2111d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2112d382aafbSBarry Smith You must instead have
2113d382aafbSBarry Smith $      PetscInt row(1),col(1)
2114d382aafbSBarry Smith $      PetscScalar val(1)
2115d382aafbSBarry Smith $        ...
2116d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2117d382aafbSBarry Smith 
2118d382aafbSBarry Smith 
2119d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2120d382aafbSBarry Smith 
2121d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2122d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2123d382aafbSBarry Smith 
2124d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2125d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2126d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2127d382aafbSBarry Smith 
2128d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2129e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2130d382aafbSBarry Smith 
2131d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2132d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2133d382aafbSBarry Smith 
2134d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2135d382aafbSBarry Smith      automatically by "make allfortranstubs".
2136d382aafbSBarry Smith 
2137e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2138d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2139d382aafbSBarry Smith      include their predecessors
2140d382aafbSBarry Smith 
2141d382aafbSBarry Smith     Level: beginner
2142d382aafbSBarry Smith 
2143d382aafbSBarry Smith M*/
2144d382aafbSBarry Smith 
21457087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
21467087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
21477087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
21487087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
21497087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
21507087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2151d382aafbSBarry Smith 
21527087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
21537087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
21547087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
21557087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
21567087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2157d7aa01a8SHong Zhang extern PetscErrorCode  PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
21587087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
21597087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
21607087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
21617087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
21627087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
21637087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
21647087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
21659b67c4b3SDmitry Karpeev extern PetscErrorCode  PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2166d382aafbSBarry Smith 
21677087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
21687087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2169d382aafbSBarry Smith 
217076bdecfbSBarry Smith /*J
2171d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2172d382aafbSBarry Smith        with an optional dynamic library name, for example
2173d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2174d382aafbSBarry Smith 
2175d382aafbSBarry Smith    Level: beginner
2176d382aafbSBarry Smith 
2177e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2178d382aafbSBarry Smith    with the option --download-sprng
2179d382aafbSBarry Smith 
2180d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
218176bdecfbSBarry Smith J*/
2182d382aafbSBarry Smith #define PetscRandomType char*
2183d382aafbSBarry Smith #define PETSCRAND       "rand"
2184d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2185d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2186d382aafbSBarry Smith 
2187d382aafbSBarry Smith /* Logging support */
21887087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2189d382aafbSBarry Smith 
21907087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2191d382aafbSBarry Smith 
2192d382aafbSBarry Smith /*S
2193d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2194d382aafbSBarry Smith 
2195d382aafbSBarry Smith    Level: intermediate
2196d382aafbSBarry Smith 
2197d382aafbSBarry Smith   Concepts: random numbers
2198d382aafbSBarry Smith 
2199d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2200d382aafbSBarry Smith S*/
2201d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2202d382aafbSBarry Smith 
2203d382aafbSBarry Smith /* Dynamic creation and loading functions */
2204d382aafbSBarry Smith extern PetscFList PetscRandomList;
2205ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2206d382aafbSBarry Smith 
22077087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22087087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22097087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
22107087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
22117087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
22127087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
22137087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
22147087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2215d382aafbSBarry Smith 
2216d382aafbSBarry Smith /*MC
2217d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2218d382aafbSBarry Smith 
2219d382aafbSBarry Smith   Synopsis:
22201890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2221d382aafbSBarry Smith 
2222d382aafbSBarry Smith   Not Collective
2223d382aafbSBarry Smith 
2224d382aafbSBarry Smith   Input Parameters:
2225d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2226d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2227d382aafbSBarry Smith . func_name   - The name of routine to create method context
2228d382aafbSBarry Smith - create_func - The creation routine itself
2229d382aafbSBarry Smith 
2230d382aafbSBarry Smith   Notes:
2231d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2232d382aafbSBarry Smith 
2233d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2234d382aafbSBarry Smith 
2235d382aafbSBarry Smith   Sample usage:
2236d382aafbSBarry Smith .vb
2237d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2238d382aafbSBarry Smith .ve
2239d382aafbSBarry Smith 
2240d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2241d382aafbSBarry Smith .vb
2242d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2243d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2244d382aafbSBarry Smith .ve
2245d382aafbSBarry Smith    or at runtime via the option
2246d382aafbSBarry Smith .vb
2247d382aafbSBarry Smith     -random_type my_random_name
2248d382aafbSBarry Smith .ve
2249d382aafbSBarry Smith 
2250d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2251d382aafbSBarry Smith 
2252d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2253d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2254d382aafbSBarry Smith 
2255d382aafbSBarry Smith   Level: advanced
2256d382aafbSBarry Smith 
2257d382aafbSBarry Smith .keywords: PetscRandom, register
2258d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2259d382aafbSBarry Smith M*/
2260d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2261d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2262d382aafbSBarry Smith #else
2263d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2264d382aafbSBarry Smith #endif
2265d382aafbSBarry Smith 
22667087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
22677087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
22687087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
22697087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
22707087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
22717087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
22727087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
22737087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
2274fcfd50ebSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom*);
2275d382aafbSBarry Smith 
22767087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
22777087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
22787087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
22797087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
22807087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
22817087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
22827087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2283d382aafbSBarry Smith 
22847087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
22857087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
22867087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
22877087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
22887087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
22897087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
22907087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
22917087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
22927087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
22937087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
22947087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
22957087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
22967087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2297d382aafbSBarry Smith 
2298d382aafbSBarry Smith /*
2299d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2300d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2301d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2302d382aafbSBarry Smith   PetscBinarySeek().
2303d382aafbSBarry Smith */
2304d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2305d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2306d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2307d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2308d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2309d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2310d382aafbSBarry Smith 
2311d382aafbSBarry Smith /*E
2312d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2313d382aafbSBarry Smith 
2314d382aafbSBarry Smith   Level: advanced
2315d382aafbSBarry Smith 
2316d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2317d382aafbSBarry Smith E*/
2318d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
23197087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
23207087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
232146090da6SBarry Smith extern PetscErrorCode  PetscByteSwap(void *,PetscDataType,PetscInt);
2322d382aafbSBarry Smith 
23237087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
23247087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
23257087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
23267c764164SBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(const char*);
23277087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
23287087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2329d382aafbSBarry Smith 
23307087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
23317087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
23327087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
23337087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
23347087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2335d382aafbSBarry Smith 
23367087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2337d382aafbSBarry Smith 
2338d382aafbSBarry Smith /*E
2339d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2340d382aafbSBarry Smith 
2341d382aafbSBarry Smith   Level: beginner
2342d382aafbSBarry Smith 
2343d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2344d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2345d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2346d382aafbSBarry Smith E*/
234711f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2348d382aafbSBarry Smith 
2349d382aafbSBarry Smith /*MC
2350d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2351d382aafbSBarry Smith 
2352d382aafbSBarry Smith     Level: beginner
2353d382aafbSBarry Smith 
2354d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2355eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2356eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2357d382aafbSBarry Smith 
2358d382aafbSBarry Smith M*/
2359d382aafbSBarry Smith 
2360d382aafbSBarry Smith /*MC
2361d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2362d382aafbSBarry Smith                 value into that location
2363d382aafbSBarry Smith 
2364d382aafbSBarry Smith     Level: beginner
2365d382aafbSBarry Smith 
2366d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2367eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2368eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2369d382aafbSBarry Smith 
2370d382aafbSBarry Smith M*/
2371d382aafbSBarry Smith 
2372d382aafbSBarry Smith /*MC
2373d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2374d382aafbSBarry Smith 
2375d382aafbSBarry Smith     Level: beginner
2376d382aafbSBarry Smith 
2377d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2378d382aafbSBarry Smith 
2379d382aafbSBarry Smith M*/
2380d382aafbSBarry Smith 
2381d382aafbSBarry Smith /*S
2382d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2383d382aafbSBarry Smith 
2384d382aafbSBarry Smith    Level: advanced
2385d382aafbSBarry Smith 
2386d382aafbSBarry Smith    Concepts: communicator, create
2387d382aafbSBarry Smith S*/
2388d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2389d382aafbSBarry Smith 
2390d382aafbSBarry Smith struct _n_PetscSubcomm {
2391d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2392d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2393d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2394d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2395d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2396d382aafbSBarry Smith };
2397d382aafbSBarry Smith 
2398638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2399638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2400638faf0bSHong Zhang 
24017087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2402fcfd50ebSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm*);
24037087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24047c764164SBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
24057087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2406d382aafbSBarry Smith 
240782a7e548SBarry Smith #include <petscctable.h>
240882a7e548SBarry Smith 
2409d382aafbSBarry Smith PETSC_EXTERN_CXX_END
24106c7e564aSBarry Smith 
24119e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24129e03d832SJed Brown #undef __FUNCT__
24139e03d832SJed Brown #define __FUNCT__ "User provided function"
24149e03d832SJed Brown 
2415d382aafbSBarry Smith #endif
2416