1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 11d382aafbSBarry Smith in the conf/variables definition of PETSC_INCLUDE 12d382aafbSBarry Smith */ 13d382aafbSBarry Smith #include "petscconf.h" 14d382aafbSBarry Smith #include "petscfix.h" 15d382aafbSBarry Smith 16d382aafbSBarry Smith /* ========================================================================== */ 17d382aafbSBarry Smith /* 18d382aafbSBarry Smith This facilitates using C version of PETSc from C++ and 19e2e64c6bSBarry Smith C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 20d382aafbSBarry Smith */ 21d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 22d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 23d382aafbSBarry Smith #endif 24d382aafbSBarry Smith 25d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 26d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" { 27d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END } 28d382aafbSBarry Smith #else 29d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN 30d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END 31d382aafbSBarry Smith #endif 32d382aafbSBarry Smith /* ========================================================================== */ 33d382aafbSBarry Smith /* 34d382aafbSBarry Smith Current PETSc version number and release date. Also listed in 35d382aafbSBarry Smith Web page 36d382aafbSBarry Smith src/docs/tex/manual/intro.tex, 37d382aafbSBarry Smith src/docs/tex/manual/manual.tex. 38d382aafbSBarry Smith src/docs/website/index.html. 39d382aafbSBarry Smith */ 40d382aafbSBarry Smith #include "petscversion.h" 41*301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 42d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1) 43*301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \ 44d382aafbSBarry Smith PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 45*301d30feSBarry Smith PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE) 46d382aafbSBarry Smith #else 47*301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s HG Date: %s", \ 48*301d30feSBarry Smith PETSC_VERSION_HG, PETSC_VERSION_DATE_HG) 49d382aafbSBarry Smith #endif 50d382aafbSBarry Smith 51d382aafbSBarry Smith /*MC 52d382aafbSBarry Smith PetscGetVersion - Gets the PETSc version information in a string. 53d382aafbSBarry Smith 54d382aafbSBarry Smith Input Parameter: 55d382aafbSBarry Smith . len - length of the string 56d382aafbSBarry Smith 57d382aafbSBarry Smith Output Parameter: 58d382aafbSBarry Smith . version - version string 59d382aafbSBarry Smith 60d382aafbSBarry Smith Level: developer 61d382aafbSBarry Smith 62d382aafbSBarry Smith Usage: 63d382aafbSBarry Smith char version[256]; 64d382aafbSBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 65d382aafbSBarry Smith 66d382aafbSBarry Smith Fortran Note: 67d382aafbSBarry Smith This routine is not supported in Fortran. 68d382aafbSBarry Smith 69d382aafbSBarry Smith .seealso: PetscGetProgramName() 70d382aafbSBarry Smith 71d382aafbSBarry Smith M*/ 72d382aafbSBarry Smith 73d382aafbSBarry Smith /* ========================================================================== */ 74d382aafbSBarry Smith 75d382aafbSBarry Smith /* 76d382aafbSBarry Smith Currently cannot check formatting for PETSc print statements because we have our 77d382aafbSBarry Smith own format %D and %G 78d382aafbSBarry Smith */ 79d382aafbSBarry Smith #undef PETSC_PRINTF_FORMAT_CHECK 80d382aafbSBarry Smith #define PETSC_PRINTF_FORMAT_CHECK(a,b) 81d382aafbSBarry Smith #undef PETSC_FPRINTF_FORMAT_CHECK 82d382aafbSBarry Smith #define PETSC_FPRINTF_FORMAT_CHECK(a,b) 83d382aafbSBarry Smith 84d382aafbSBarry Smith /* 85e2e64c6bSBarry Smith Fixes for ./configure time choices which impact our interface. Currently only 86d382aafbSBarry Smith calling conventions and extra compiler checking falls under this category. 87d382aafbSBarry Smith */ 88d382aafbSBarry Smith #if !defined(PETSC_STDCALL) 89d382aafbSBarry Smith #define PETSC_STDCALL 90d382aafbSBarry Smith #endif 91d382aafbSBarry Smith #if !defined(PETSC_TEMPLATE) 92d382aafbSBarry Smith #define PETSC_TEMPLATE 93d382aafbSBarry Smith #endif 94d382aafbSBarry Smith #if !defined(PETSC_HAVE_DLL_EXPORT) 95d382aafbSBarry Smith #define PETSC_DLL_EXPORT 96d382aafbSBarry Smith #define PETSC_DLL_IMPORT 97d382aafbSBarry Smith #endif 98d382aafbSBarry Smith #if !defined(PETSC_DLLEXPORT) 99d382aafbSBarry Smith #define PETSC_DLLEXPORT 100d382aafbSBarry Smith #endif 101d382aafbSBarry Smith #if !defined(PETSCVEC_DLLEXPORT) 102d382aafbSBarry Smith #define PETSCVEC_DLLEXPORT 103d382aafbSBarry Smith #endif 104d382aafbSBarry Smith #if !defined(PETSCMAT_DLLEXPORT) 105d382aafbSBarry Smith #define PETSCMAT_DLLEXPORT 106d382aafbSBarry Smith #endif 107d382aafbSBarry Smith #if !defined(PETSCDM_DLLEXPORT) 108d382aafbSBarry Smith #define PETSCDM_DLLEXPORT 109d382aafbSBarry Smith #endif 110d382aafbSBarry Smith #if !defined(PETSCKSP_DLLEXPORT) 111d382aafbSBarry Smith #define PETSCKSP_DLLEXPORT 112d382aafbSBarry Smith #endif 113d382aafbSBarry Smith #if !defined(PETSCSNES_DLLEXPORT) 114d382aafbSBarry Smith #define PETSCSNES_DLLEXPORT 115d382aafbSBarry Smith #endif 116d382aafbSBarry Smith #if !defined(PETSCTS_DLLEXPORT) 117d382aafbSBarry Smith #define PETSCTS_DLLEXPORT 118d382aafbSBarry Smith #endif 119d382aafbSBarry Smith #if !defined(PETSCFORTRAN_DLLEXPORT) 120d382aafbSBarry Smith #define PETSCFORTRAN_DLLEXPORT 121d382aafbSBarry Smith #endif 122d382aafbSBarry Smith /* ========================================================================== */ 123d382aafbSBarry Smith 124d382aafbSBarry Smith /* 125d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 126d382aafbSBarry Smith 127d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 128d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 129d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 130d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 131d382aafbSBarry Smith mpicxx.h directly in their code 132d382aafbSBarry Smith */ 133d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 134d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 135d382aafbSBarry Smith #include "mpi.h" 13665013866SBarry Smith 137d382aafbSBarry Smith /* 138d382aafbSBarry Smith Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 139d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 140d382aafbSBarry Smith 141d382aafbSBarry Smith The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense. 142d382aafbSBarry Smith */ 143d382aafbSBarry Smith #include <stdio.h> 144d382aafbSBarry Smith 145d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 146d382aafbSBarry Smith #if !defined(MPIAPI) 147d382aafbSBarry Smith #define MPIAPI 148d382aafbSBarry Smith #endif 149d382aafbSBarry Smith 150d382aafbSBarry Smith /*MC 151d382aafbSBarry Smith PetscErrorCode - datatype used for return error code from all PETSc functions 152d382aafbSBarry Smith 153d382aafbSBarry Smith Level: beginner 154d382aafbSBarry Smith 155d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 156d382aafbSBarry Smith M*/ 157d382aafbSBarry Smith typedef int PetscErrorCode; 158d382aafbSBarry Smith 159d382aafbSBarry Smith /*MC 160d382aafbSBarry Smith 161503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 162d382aafbSBarry Smith (internal integer in the data structure used for error 163d382aafbSBarry Smith checking). These are all defined by an offset from the lowest 1640700a824SBarry Smith one, PETSC_SMALLEST_CLASSID. 165d382aafbSBarry Smith 166d382aafbSBarry Smith Level: advanced 167d382aafbSBarry Smith 1680700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 169d382aafbSBarry Smith M*/ 1700700a824SBarry Smith typedef int PetscClassId; 171d382aafbSBarry Smith 172d382aafbSBarry Smith /*MC 173c60ec953SBarry Smith PetscLogEvent - id used to identify PETSc or user events which timed portions (blocks of executable) 174c60ec953SBarry Smith code. 175d382aafbSBarry Smith 176d382aafbSBarry Smith Level: intermediate 177d382aafbSBarry Smith 178d382aafbSBarry Smith .seealso: PetscLogEventRegister(), PetscLogEventBegin(), PetscLogEventEnd(), PetscLogStage 179d382aafbSBarry Smith M*/ 180d382aafbSBarry Smith typedef int PetscLogEvent; 181d382aafbSBarry Smith 182d382aafbSBarry Smith /*MC 183c60ec953SBarry Smith PetscLogStage - id used to identify user stages (phases, sections) of runs - for logging 184d382aafbSBarry Smith 185d382aafbSBarry Smith Level: intermediate 186d382aafbSBarry Smith 187d382aafbSBarry Smith .seealso: PetscLogStageRegister(), PetscLogStageBegin(), PetscLogStageEnd(), PetscLogEvent 188d382aafbSBarry Smith M*/ 189d382aafbSBarry Smith typedef int PetscLogStage; 190d382aafbSBarry Smith 191d382aafbSBarry Smith /*MC 192d382aafbSBarry Smith PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 193d382aafbSBarry Smith 194d382aafbSBarry Smith Level: intermediate 195d382aafbSBarry Smith 196d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 1973b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 1983b2a8c54SBarry Smith (except on very rare BLAS/LAPACK implementations that support 64 bit integers). 1993b2a8c54SBarry Smith 2003b2a8c54SBarry Smith PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 2013b2a8c54SBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 2023b2a8c54SBarry Smith 2033b2a8c54SBarry Smith PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2043b2a8c54SBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 205d382aafbSBarry Smith 206d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt 207d382aafbSBarry Smith 208d382aafbSBarry Smith M*/ 209d382aafbSBarry Smith typedef int PetscBLASInt; 210d382aafbSBarry Smith 211d382aafbSBarry Smith /*MC 212d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 213d382aafbSBarry Smith 214d382aafbSBarry Smith Level: intermediate 215d382aafbSBarry Smith 216d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 2173b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 218d382aafbSBarry Smith 2193b2a8c54SBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 220d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 221d382aafbSBarry Smith 2223b2a8c54SBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 223d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 224d382aafbSBarry Smith 225d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 226d382aafbSBarry Smith 227d382aafbSBarry Smith M*/ 228d382aafbSBarry Smith typedef int PetscMPIInt; 229d382aafbSBarry Smith 230d382aafbSBarry Smith /*MC 231d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 232d382aafbSBarry Smith 233d382aafbSBarry Smith Level: intermediate 234d382aafbSBarry Smith 235d382aafbSBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 236d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 237d382aafbSBarry Smith 238d382aafbSBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 239d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 240d382aafbSBarry Smith 241d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 242d382aafbSBarry Smith M*/ 243d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 244d382aafbSBarry Smith 245d382aafbSBarry Smith /*MC 246d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 2473b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 248d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 249d382aafbSBarry Smith 250d382aafbSBarry Smith Level: intermediate 251d382aafbSBarry Smith 252d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 253d382aafbSBarry Smith M*/ 254d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 255d382aafbSBarry Smith typedef long long PetscInt; 256d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT 257d382aafbSBarry Smith #else 258d382aafbSBarry Smith typedef int PetscInt; 259d382aafbSBarry Smith #define MPIU_INT MPI_INT 260d382aafbSBarry Smith #endif 261d382aafbSBarry Smith 262503cfb0cSBarry Smith /* 263503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 264503cfb0cSBarry Smith */ 265d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 266d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT 267d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 268d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG 269d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 270d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT 271d382aafbSBarry Smith #else 272d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 273d382aafbSBarry Smith #endif 274d382aafbSBarry Smith 275d382aafbSBarry Smith 276d382aafbSBarry Smith /* 277d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 278d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 279d382aafbSBarry Smith */ 280d382aafbSBarry Smith 281d382aafbSBarry Smith extern FILE* PETSC_STDOUT; 282d382aafbSBarry Smith 283d382aafbSBarry Smith /* 284d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 285d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 286d382aafbSBarry Smith */ 287d382aafbSBarry Smith extern FILE* PETSC_STDERR; 288d382aafbSBarry Smith 289d382aafbSBarry Smith /* 290d382aafbSBarry Smith PETSC_ZOPEFD is used to send data to the PETSc webpage. It can be used 291d382aafbSBarry Smith in conjunction with PETSC_STDOUT, or by itself. 292d382aafbSBarry Smith */ 293d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD; 294d382aafbSBarry Smith 295d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 296d382aafbSBarry Smith /*MC 297d382aafbSBarry Smith PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of 298d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 299d382aafbSBarry Smith 300d382aafbSBarry Smith Synopsis: 301d382aafbSBarry Smith PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function)) 302d382aafbSBarry Smith 303eca87e8dSBarry Smith Not collective 304eca87e8dSBarry Smith 305d382aafbSBarry Smith Level: developer 306d382aafbSBarry Smith 307d382aafbSBarry Smith Example: 308d382aafbSBarry Smith PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine 309d382aafbSBarry Smith PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r) 310d382aafbSBarry Smith 311d382aafbSBarry Smith .seealso: PetscPolymorphicFunction() 312d382aafbSBarry Smith 313d382aafbSBarry Smith M*/ 314d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;} 315d382aafbSBarry Smith 316d382aafbSBarry Smith /*MC 317d382aafbSBarry Smith PetscPolymorphicScalar - allows defining a C++ polymorphic version of 318d382aafbSBarry Smith a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument 319d382aafbSBarry Smith 320d382aafbSBarry Smith Synopsis: 321d382aafbSBarry Smith PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function)) 322d382aafbSBarry Smith 323eca87e8dSBarry Smith Not collective 324eca87e8dSBarry Smith 325d382aafbSBarry Smith Level: developer 326d382aafbSBarry Smith 327d382aafbSBarry Smith Example: 328d382aafbSBarry Smith PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine 329d382aafbSBarry Smith PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);} 330d382aafbSBarry Smith 331d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine() 332d382aafbSBarry Smith 333d382aafbSBarry Smith M*/ 334d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;} 335d382aafbSBarry Smith 336d382aafbSBarry Smith /*MC 337d382aafbSBarry Smith PetscPolymorphicFunction - allows defining a C++ polymorphic version of 338d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 339d382aafbSBarry Smith and returns the computed value (istead of an error code) 340d382aafbSBarry Smith 341d382aafbSBarry Smith Synopsis: 342d382aafbSBarry Smith PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name) 343d382aafbSBarry Smith 344eca87e8dSBarry Smith Not collective 345eca87e8dSBarry Smith 346d382aafbSBarry Smith Level: developer 347d382aafbSBarry Smith 348d382aafbSBarry Smith Example: 349d382aafbSBarry Smith PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine 350d382aafbSBarry Smith PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;} 351d382aafbSBarry Smith 352d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine() 353d382aafbSBarry Smith 354d382aafbSBarry Smith M*/ 355d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;} 356d382aafbSBarry Smith 357d382aafbSBarry Smith #else 358d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) 359d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) 360d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) 361d382aafbSBarry Smith #endif 362d382aafbSBarry Smith 363d382aafbSBarry Smith /*MC 364d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 365d382aafbSBarry Smith 366d382aafbSBarry Smith Synopsis: 367d382aafbSBarry Smith PetscTruth PetscUnlikely(PetscTruth cond) 368d382aafbSBarry Smith 369eca87e8dSBarry Smith Not Collective 370eca87e8dSBarry Smith 371d382aafbSBarry Smith Input Parameters: 372d382aafbSBarry Smith . cond - condition or expression 373d382aafbSBarry Smith 374d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 375d382aafbSBarry Smith branch is unlikely. 376d382aafbSBarry Smith 377d382aafbSBarry Smith Level: advanced 378d382aafbSBarry Smith 379d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 380d382aafbSBarry Smith M*/ 381d382aafbSBarry Smith 382d382aafbSBarry Smith /*MC 383d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 384d382aafbSBarry Smith 385d382aafbSBarry Smith Synopsis: 386d382aafbSBarry Smith PetscTruth PetscUnlikely(PetscTruth cond) 387d382aafbSBarry Smith 388eca87e8dSBarry Smith Not Collective 389eca87e8dSBarry Smith 390d382aafbSBarry Smith Input Parameters: 391d382aafbSBarry Smith . cond - condition or expression 392d382aafbSBarry Smith 393d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 394d382aafbSBarry Smith branch is likely. 395d382aafbSBarry Smith 396d382aafbSBarry Smith Level: advanced 397d382aafbSBarry Smith 398d382aafbSBarry Smith .seealso: PetscUnlikely() 399d382aafbSBarry Smith M*/ 400d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 401d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 402d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 403d382aafbSBarry Smith #else 404cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 405cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 406d382aafbSBarry Smith #endif 407d382aafbSBarry Smith 408d382aafbSBarry Smith /* 409d382aafbSBarry Smith Extern indicates a PETSc function defined elsewhere 410d382aafbSBarry Smith */ 411d382aafbSBarry Smith #if !defined(EXTERN) 412d382aafbSBarry Smith #define EXTERN extern 413d382aafbSBarry Smith #endif 414d382aafbSBarry Smith 415d382aafbSBarry Smith /* 416d382aafbSBarry Smith Defines some elementary mathematics functions and constants. 417d382aafbSBarry Smith */ 418d382aafbSBarry Smith #include "petscmath.h" 419d382aafbSBarry Smith 420d382aafbSBarry Smith /* 421d382aafbSBarry Smith Declare extern C stuff after including external header files 422d382aafbSBarry Smith */ 423d382aafbSBarry Smith 424d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN 425d382aafbSBarry Smith 426d382aafbSBarry Smith /* 427d382aafbSBarry Smith Basic PETSc constants 428d382aafbSBarry Smith */ 429d382aafbSBarry Smith 430d382aafbSBarry Smith /*E 431503cfb0cSBarry Smith PetscTruth - Logical variable. Actually an int in C and a logical in Fortran. 432d382aafbSBarry Smith 433d382aafbSBarry Smith Level: beginner 434d382aafbSBarry Smith 435d382aafbSBarry Smith E*/ 436d382aafbSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscTruth; 437d382aafbSBarry Smith extern const char *PetscTruths[]; 438d382aafbSBarry Smith 439d382aafbSBarry Smith /*MC 440d382aafbSBarry Smith PETSC_FALSE - False value of PetscTruth 441d382aafbSBarry Smith 442d382aafbSBarry Smith Level: beginner 443d382aafbSBarry Smith 444d382aafbSBarry Smith Note: Zero integer 445d382aafbSBarry Smith 446d382aafbSBarry Smith .seealso: PetscTruth, PETSC_TRUE 447d382aafbSBarry Smith M*/ 448d382aafbSBarry Smith 449d382aafbSBarry Smith /*MC 450d382aafbSBarry Smith PETSC_TRUE - True value of PetscTruth 451d382aafbSBarry Smith 452d382aafbSBarry Smith Level: beginner 453d382aafbSBarry Smith 454d382aafbSBarry Smith Note: Nonzero integer 455d382aafbSBarry Smith 456d382aafbSBarry Smith .seealso: PetscTruth, PETSC_FALSE 457d382aafbSBarry Smith M*/ 458d382aafbSBarry Smith 459d382aafbSBarry Smith /*MC 460d382aafbSBarry Smith PETSC_YES - Alias for PETSC_TRUE 461d382aafbSBarry Smith 462d382aafbSBarry Smith Level: beginner 463d382aafbSBarry Smith 464d382aafbSBarry Smith Note: Zero integer 465d382aafbSBarry Smith 466d382aafbSBarry Smith .seealso: PetscTruth, PETSC_TRUE, PETSC_FALSE, PETSC_NO 467d382aafbSBarry Smith M*/ 468d382aafbSBarry Smith #define PETSC_YES PETSC_TRUE 469d382aafbSBarry Smith 470d382aafbSBarry Smith /*MC 471d382aafbSBarry Smith PETSC_NO - Alias for PETSC_FALSE 472d382aafbSBarry Smith 473d382aafbSBarry Smith Level: beginner 474d382aafbSBarry Smith 475d382aafbSBarry Smith Note: Nonzero integer 476d382aafbSBarry Smith 477d382aafbSBarry Smith .seealso: PetscTruth, PETSC_TRUE, PETSC_FALSE, PETSC_YES 478d382aafbSBarry Smith M*/ 479d382aafbSBarry Smith #define PETSC_NO PETSC_FALSE 480d382aafbSBarry Smith 481d382aafbSBarry Smith /*MC 482d382aafbSBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer 483d382aafbSBarry Smith 484d382aafbSBarry Smith Level: beginner 485d382aafbSBarry Smith 486d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 487d382aafbSBarry Smith some default 488d382aafbSBarry Smith 489d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 490503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 491d382aafbSBarry Smith 492d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 493d382aafbSBarry Smith 494d382aafbSBarry Smith M*/ 495d382aafbSBarry Smith #define PETSC_NULL 0 496d382aafbSBarry Smith 497d382aafbSBarry Smith /*MC 498d382aafbSBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 499d382aafbSBarry Smith where you wish PETSc to use the default. 500d382aafbSBarry Smith 501d382aafbSBarry Smith Level: beginner 502d382aafbSBarry Smith 503d382aafbSBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 504d382aafbSBarry Smith 505d382aafbSBarry Smith M*/ 506d382aafbSBarry Smith #define PETSC_DECIDE -1 507d382aafbSBarry Smith 508d382aafbSBarry Smith /*MC 509d382aafbSBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 510d382aafbSBarry Smith where you wish PETSc to use the default. 511d382aafbSBarry Smith 512d382aafbSBarry Smith Level: beginner 513d382aafbSBarry Smith 514d382aafbSBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 515d382aafbSBarry Smith 516d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 517d382aafbSBarry Smith 518d382aafbSBarry Smith M*/ 519d382aafbSBarry Smith #define PETSC_DEFAULT -2 520d382aafbSBarry Smith 521d382aafbSBarry Smith 522d382aafbSBarry Smith /*MC 523d382aafbSBarry Smith PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 524d382aafbSBarry Smith 525d382aafbSBarry Smith Level: beginner 526d382aafbSBarry Smith 527d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 528d382aafbSBarry Smith some default 529d382aafbSBarry Smith 530d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 531d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 532d382aafbSBarry Smith 533d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 534d382aafbSBarry Smith 535d382aafbSBarry Smith M*/ 536d382aafbSBarry Smith #define PETSC_IGNORE PETSC_NULL 537d382aafbSBarry Smith 538d382aafbSBarry Smith /*MC 539d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 540d382aafbSBarry Smith where you wish PETSc to compute the required value. 541d382aafbSBarry Smith 542d382aafbSBarry Smith Level: beginner 543d382aafbSBarry Smith 544d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 545d382aafbSBarry Smith 546d382aafbSBarry Smith M*/ 547d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 548d382aafbSBarry Smith 549d382aafbSBarry Smith /*MC 550d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 551d382aafbSBarry Smith all the processs that PETSc knows about. 552d382aafbSBarry Smith 553d382aafbSBarry Smith Level: beginner 554d382aafbSBarry Smith 555d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 556d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 557d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 558d382aafbSBarry Smith PetscInitialize() 559d382aafbSBarry Smith 560d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 561d382aafbSBarry Smith 562d382aafbSBarry Smith M*/ 563d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD; 564d382aafbSBarry Smith 565d382aafbSBarry Smith /*MC 566503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 567d382aafbSBarry Smith 568d382aafbSBarry Smith Level: beginner 569d382aafbSBarry Smith 570d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 571d382aafbSBarry Smith 572d382aafbSBarry Smith M*/ 573d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 574d382aafbSBarry Smith 575d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscTruth PetscInitializeCalled; 576d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscTruth PetscFinalizeCalled; 577d382aafbSBarry Smith 578d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 579d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 580d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscCommDestroy(MPI_Comm*); 581d382aafbSBarry Smith 582d382aafbSBarry Smith /*MC 583d382aafbSBarry Smith PetscMalloc - Allocates memory 584d382aafbSBarry Smith 585eca87e8dSBarry Smith Synopsis: 586eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 587eca87e8dSBarry Smith 588eca87e8dSBarry Smith Not Collective 589eca87e8dSBarry Smith 590d382aafbSBarry Smith Input Parameter: 591d382aafbSBarry Smith . m - number of bytes to allocate 592d382aafbSBarry Smith 593d382aafbSBarry Smith Output Parameter: 594d382aafbSBarry Smith . result - memory allocated 595d382aafbSBarry Smith 596d382aafbSBarry Smith Level: beginner 597d382aafbSBarry Smith 598d382aafbSBarry Smith Notes: Memory is always allocated at least double aligned 599d382aafbSBarry Smith 600d382aafbSBarry Smith If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 601d382aafbSBarry Smith properly handle not freeing the null pointer. 602d382aafbSBarry Smith 603d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 604d382aafbSBarry Smith 605d382aafbSBarry Smith Concepts: memory allocation 606d382aafbSBarry Smith 607d382aafbSBarry Smith M*/ 608d382aafbSBarry Smith #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,__FUNCT__,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 609d382aafbSBarry Smith 610d382aafbSBarry Smith /*MC 611503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 612d382aafbSBarry Smith 613d382aafbSBarry Smith Synopsis: 614d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 615d382aafbSBarry Smith 616eca87e8dSBarry Smith Not Collective 617eca87e8dSBarry Smith 618eca87e8dSBarry Smith Input Parameters: 619eca87e8dSBarry Smith . addr - address to align (any pointer type) 620eca87e8dSBarry Smith 621d382aafbSBarry Smith Level: developer 622d382aafbSBarry Smith 623d382aafbSBarry Smith .seealso: PetscMallocAlign() 624d382aafbSBarry Smith 625d382aafbSBarry Smith Concepts: memory allocation 626d382aafbSBarry Smith M*/ 627d382aafbSBarry Smith #if defined PETSC_UINTPTR_T 628d382aafbSBarry Smith # define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 629d382aafbSBarry Smith #else 630d382aafbSBarry Smith # define PetscAddrAlign(a) (void*)(a) 631d382aafbSBarry Smith #endif 632d382aafbSBarry Smith 633d382aafbSBarry Smith /*MC 634503cfb0cSBarry Smith PetscMalloc2 - Allocates 2 chunks of memory both aligned to PETSC_MEMALIGN 635d382aafbSBarry Smith 636eca87e8dSBarry Smith Synopsis: 637eca87e8dSBarry Smith PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 638eca87e8dSBarry Smith 639eca87e8dSBarry Smith Not Collective 640eca87e8dSBarry Smith 641d382aafbSBarry Smith Input Parameter: 642d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 643d382aafbSBarry Smith . t1 - type of first memory elements 644d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 645d382aafbSBarry Smith - t2 - type of second memory elements 646d382aafbSBarry Smith 647d382aafbSBarry Smith Output Parameter: 648d382aafbSBarry Smith + r1 - memory allocated in first chunk 649d382aafbSBarry Smith - r2 - memory allocated in second chunk 650d382aafbSBarry Smith 651d382aafbSBarry Smith Level: developer 652d382aafbSBarry Smith 653d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 654d382aafbSBarry Smith 655d382aafbSBarry Smith Concepts: memory allocation 656d382aafbSBarry Smith 657d382aafbSBarry Smith M*/ 658d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 659d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 660d382aafbSBarry Smith #else 6613b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \ 662d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 663d382aafbSBarry Smith #endif 664d382aafbSBarry Smith 665d382aafbSBarry Smith /*MC 666503cfb0cSBarry Smith PetscMalloc3 - Allocates 3 chunks of memory all aligned to PETSC_MEMALIGN 667d382aafbSBarry Smith 668eca87e8dSBarry Smith Synopsis: 669eca87e8dSBarry Smith PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 670eca87e8dSBarry Smith 671eca87e8dSBarry Smith Not Collective 672eca87e8dSBarry Smith 673d382aafbSBarry Smith Input Parameter: 674d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 675d382aafbSBarry Smith . t1 - type of first memory elements 676d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 677d382aafbSBarry Smith . t2 - type of second memory elements 678d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 679d382aafbSBarry Smith - t3 - type of third memory elements 680d382aafbSBarry Smith 681d382aafbSBarry Smith Output Parameter: 682d382aafbSBarry Smith + r1 - memory allocated in first chunk 683d382aafbSBarry Smith . r2 - memory allocated in second chunk 684d382aafbSBarry Smith - r3 - memory allocated in third chunk 685d382aafbSBarry Smith 686d382aafbSBarry Smith Level: developer 687d382aafbSBarry Smith 688d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 689d382aafbSBarry Smith 690d382aafbSBarry Smith Concepts: memory allocation 691d382aafbSBarry Smith 692d382aafbSBarry Smith M*/ 693d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 694d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 695d382aafbSBarry Smith #else 6963b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 697d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 698d382aafbSBarry Smith #endif 699d382aafbSBarry Smith 700d382aafbSBarry Smith /*MC 701503cfb0cSBarry Smith PetscMalloc4 - Allocates 4 chunks of memory all aligned to PETSC_MEMALIGN 702d382aafbSBarry Smith 703eca87e8dSBarry Smith Synopsis: 704eca87e8dSBarry Smith PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 705eca87e8dSBarry Smith 706eca87e8dSBarry Smith Not Collective 707eca87e8dSBarry Smith 708d382aafbSBarry Smith Input Parameter: 709d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 710d382aafbSBarry Smith . t1 - type of first memory elements 711d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 712d382aafbSBarry Smith . t2 - type of second memory elements 713d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 714d382aafbSBarry Smith . t3 - type of third memory elements 715d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 716d382aafbSBarry Smith - t4 - type of fourth memory elements 717d382aafbSBarry Smith 718d382aafbSBarry Smith Output Parameter: 719d382aafbSBarry Smith + r1 - memory allocated in first chunk 720d382aafbSBarry Smith . r2 - memory allocated in second chunk 721d382aafbSBarry Smith . r3 - memory allocated in third chunk 722d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 723d382aafbSBarry Smith 724d382aafbSBarry Smith Level: developer 725d382aafbSBarry Smith 726d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 727d382aafbSBarry Smith 728d382aafbSBarry Smith Concepts: memory allocation 729d382aafbSBarry Smith 730d382aafbSBarry Smith M*/ 731d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 732d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 733d382aafbSBarry Smith #else 734d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 7353b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 736d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 737d382aafbSBarry Smith #endif 738d382aafbSBarry Smith 739d382aafbSBarry Smith /*MC 740503cfb0cSBarry Smith PetscMalloc5 - Allocates 5 chunks of memory all aligned to PETSC_MEMALIGN 741d382aafbSBarry Smith 742eca87e8dSBarry Smith Synopsis: 743eca87e8dSBarry Smith PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 744eca87e8dSBarry Smith 745eca87e8dSBarry Smith Not Collective 746eca87e8dSBarry Smith 747d382aafbSBarry Smith Input Parameter: 748d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 749d382aafbSBarry Smith . t1 - type of first memory elements 750d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 751d382aafbSBarry Smith . t2 - type of second memory elements 752d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 753d382aafbSBarry Smith . t3 - type of third memory elements 754d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 755d382aafbSBarry Smith . t4 - type of fourth memory elements 756d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 757d382aafbSBarry Smith - t5 - type of fifth memory elements 758d382aafbSBarry Smith 759d382aafbSBarry Smith Output Parameter: 760d382aafbSBarry Smith + r1 - memory allocated in first chunk 761d382aafbSBarry Smith . r2 - memory allocated in second chunk 762d382aafbSBarry Smith . r3 - memory allocated in third chunk 763d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 764d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 765d382aafbSBarry Smith 766d382aafbSBarry Smith Level: developer 767d382aafbSBarry Smith 768d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 769d382aafbSBarry Smith 770d382aafbSBarry Smith Concepts: memory allocation 771d382aafbSBarry Smith 772d382aafbSBarry Smith M*/ 773d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 774d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 775d382aafbSBarry Smith #else 776d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 7773b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 778d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 779d382aafbSBarry Smith #endif 780d382aafbSBarry Smith 781d382aafbSBarry Smith 782d382aafbSBarry Smith /*MC 783503cfb0cSBarry Smith PetscMalloc6 - Allocates 6 chunks of memory all aligned to PETSC_MEMALIGN 784d382aafbSBarry Smith 785eca87e8dSBarry Smith Synopsis: 786eca87e8dSBarry Smith PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 787eca87e8dSBarry Smith 788eca87e8dSBarry Smith Not Collective 789eca87e8dSBarry Smith 790d382aafbSBarry Smith Input Parameter: 791d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 792d382aafbSBarry Smith . t1 - type of first memory elements 793d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 794d382aafbSBarry Smith . t2 - type of second memory elements 795d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 796d382aafbSBarry Smith . t3 - type of third memory elements 797d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 798d382aafbSBarry Smith . t4 - type of fourth memory elements 799d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 800d382aafbSBarry Smith . t5 - type of fifth memory elements 801d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 802d382aafbSBarry Smith - t6 - type of sixth memory elements 803d382aafbSBarry Smith 804d382aafbSBarry Smith Output Parameter: 805d382aafbSBarry Smith + r1 - memory allocated in first chunk 806d382aafbSBarry Smith . r2 - memory allocated in second chunk 807d382aafbSBarry Smith . r3 - memory allocated in third chunk 808d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 809d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 810d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 811d382aafbSBarry Smith 812d382aafbSBarry Smith Level: developer 813d382aafbSBarry Smith 814d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 815d382aafbSBarry Smith 816d382aafbSBarry Smith Concepts: memory allocation 817d382aafbSBarry Smith 818d382aafbSBarry Smith M*/ 819d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 820d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 821d382aafbSBarry Smith #else 822d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 8233b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 824d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 825d382aafbSBarry Smith #endif 826d382aafbSBarry Smith 827d382aafbSBarry Smith /*MC 828503cfb0cSBarry Smith PetscMalloc7 - Allocates 7 chunks of memory all aligned to PETSC_MEMALIGN 829d382aafbSBarry Smith 830eca87e8dSBarry Smith Synopsis: 831eca87e8dSBarry Smith PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 832eca87e8dSBarry Smith 833eca87e8dSBarry Smith Not Collective 834eca87e8dSBarry Smith 835d382aafbSBarry Smith Input Parameter: 836d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 837d382aafbSBarry Smith . t1 - type of first memory elements 838d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 839d382aafbSBarry Smith . t2 - type of second memory elements 840d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 841d382aafbSBarry Smith . t3 - type of third memory elements 842d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 843d382aafbSBarry Smith . t4 - type of fourth memory elements 844d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 845d382aafbSBarry Smith . t5 - type of fifth memory elements 846d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 847d382aafbSBarry Smith . t6 - type of sixth memory elements 848d382aafbSBarry Smith . m7 - number of elements to allocate in 7th chunk (may be zero) 849d382aafbSBarry Smith - t7 - type of sixth memory elements 850d382aafbSBarry Smith 851d382aafbSBarry Smith Output Parameter: 852d382aafbSBarry Smith + r1 - memory allocated in first chunk 853d382aafbSBarry Smith . r2 - memory allocated in second chunk 854d382aafbSBarry Smith . r3 - memory allocated in third chunk 855d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 856d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 857d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 858eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 859d382aafbSBarry Smith 860d382aafbSBarry Smith Level: developer 861d382aafbSBarry Smith 862d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 863d382aafbSBarry Smith 864d382aafbSBarry Smith Concepts: memory allocation 865d382aafbSBarry Smith 866d382aafbSBarry Smith M*/ 867d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 868d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 869d382aafbSBarry Smith #else 870d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 8713b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 872d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 873d382aafbSBarry Smith #endif 874d382aafbSBarry Smith 875d382aafbSBarry Smith /*MC 876503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 877d382aafbSBarry Smith 878eca87e8dSBarry Smith Synopsis: 879eca87e8dSBarry Smith PetscErrorCode PetscNew(struct type,((type *))result) 880eca87e8dSBarry Smith 881eca87e8dSBarry Smith Not Collective 882eca87e8dSBarry Smith 883d382aafbSBarry Smith Input Parameter: 884d382aafbSBarry Smith . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 885d382aafbSBarry Smith 886d382aafbSBarry Smith Output Parameter: 887d382aafbSBarry Smith . result - memory allocated 888d382aafbSBarry Smith 889d382aafbSBarry Smith Level: beginner 890d382aafbSBarry Smith 891d382aafbSBarry Smith .seealso: PetscFree(), PetscMalloc() 892d382aafbSBarry Smith 893d382aafbSBarry Smith Concepts: memory allocation 894d382aafbSBarry Smith 895d382aafbSBarry Smith M*/ 896d382aafbSBarry Smith #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 897d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 898d382aafbSBarry Smith 899d382aafbSBarry Smith /*MC 900d382aafbSBarry Smith PetscFree - Frees memory 901d382aafbSBarry Smith 902eca87e8dSBarry Smith Synopsis: 903eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 904eca87e8dSBarry Smith 905eca87e8dSBarry Smith Not Collective 906eca87e8dSBarry Smith 907d382aafbSBarry Smith Input Parameter: 908d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 909d382aafbSBarry Smith 910d382aafbSBarry Smith Level: beginner 911d382aafbSBarry Smith 912d382aafbSBarry Smith Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 913d382aafbSBarry Smith 914d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 915d382aafbSBarry Smith 916d382aafbSBarry Smith Concepts: memory allocation 917d382aafbSBarry Smith 918d382aafbSBarry Smith M*/ 919d382aafbSBarry Smith #define PetscFree(a) ((a) ? ((*PetscTrFree)((void*)(a),__LINE__,__FUNCT__,__FILE__,__SDIR__) || ((a = 0),0)) : 0) 920d382aafbSBarry Smith 921d382aafbSBarry Smith /*MC 922d382aafbSBarry Smith PetscFreeVoid - Frees memory 923d382aafbSBarry Smith 924d382aafbSBarry Smith Synopsis: 925d382aafbSBarry Smith void PetscFreeVoid(void *memory) 926d382aafbSBarry Smith 927eca87e8dSBarry Smith Not Collective 928eca87e8dSBarry Smith 929eca87e8dSBarry Smith Input Parameter: 930eca87e8dSBarry Smith . memory - memory to free 931eca87e8dSBarry Smith 932d382aafbSBarry Smith Level: beginner 933d382aafbSBarry Smith 934d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 935d382aafbSBarry Smith 936d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 937d382aafbSBarry Smith 938d382aafbSBarry Smith Concepts: memory allocation 939d382aafbSBarry Smith 940d382aafbSBarry Smith M*/ 941d382aafbSBarry Smith #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,__FUNCT__,__FILE__,__SDIR__),(a) = 0) 942d382aafbSBarry Smith 943d382aafbSBarry Smith 944d382aafbSBarry Smith /*MC 945d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 946d382aafbSBarry Smith 947eca87e8dSBarry Smith Synopsis: 948eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 949eca87e8dSBarry Smith 950eca87e8dSBarry Smith Not Collective 951eca87e8dSBarry Smith 952d382aafbSBarry Smith Input Parameter: 953d382aafbSBarry Smith + memory1 - memory to free 954d382aafbSBarry Smith - memory2 - 2nd memory to free 955d382aafbSBarry Smith 956d382aafbSBarry Smith Level: developer 957d382aafbSBarry Smith 958d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 959d382aafbSBarry Smith 960d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 961d382aafbSBarry Smith 962d382aafbSBarry Smith Concepts: memory allocation 963d382aafbSBarry Smith 964d382aafbSBarry Smith M*/ 965d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 966d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 967d382aafbSBarry Smith #else 968d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m1)) 969d382aafbSBarry Smith #endif 970d382aafbSBarry Smith 971d382aafbSBarry Smith /*MC 972d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 973d382aafbSBarry Smith 974eca87e8dSBarry Smith Synopsis: 975eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 976eca87e8dSBarry Smith 977eca87e8dSBarry Smith Not Collective 978eca87e8dSBarry Smith 979d382aafbSBarry Smith Input Parameter: 980d382aafbSBarry Smith + memory1 - memory to free 981d382aafbSBarry Smith . memory2 - 2nd memory to free 982d382aafbSBarry Smith - memory3 - 3rd memory to free 983d382aafbSBarry Smith 984d382aafbSBarry Smith Level: developer 985d382aafbSBarry Smith 986d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 987d382aafbSBarry Smith 988d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 989d382aafbSBarry Smith 990d382aafbSBarry Smith Concepts: memory allocation 991d382aafbSBarry Smith 992d382aafbSBarry Smith M*/ 993d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 994d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 995d382aafbSBarry Smith #else 996d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m1)) 997d382aafbSBarry Smith #endif 998d382aafbSBarry Smith 999d382aafbSBarry Smith /*MC 1000d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1001d382aafbSBarry Smith 1002eca87e8dSBarry Smith Synopsis: 1003eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1004eca87e8dSBarry Smith 1005eca87e8dSBarry Smith Not Collective 1006eca87e8dSBarry Smith 1007d382aafbSBarry Smith Input Parameter: 1008d382aafbSBarry Smith + m1 - memory to free 1009d382aafbSBarry Smith . m2 - 2nd memory to free 1010d382aafbSBarry Smith . m3 - 3rd memory to free 1011d382aafbSBarry Smith - m4 - 4th memory to free 1012d382aafbSBarry Smith 1013d382aafbSBarry Smith Level: developer 1014d382aafbSBarry Smith 1015d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 1016d382aafbSBarry Smith 1017d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1018d382aafbSBarry Smith 1019d382aafbSBarry Smith Concepts: memory allocation 1020d382aafbSBarry Smith 1021d382aafbSBarry Smith M*/ 1022d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1023d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1024d382aafbSBarry Smith #else 1025d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m1)) 1026d382aafbSBarry Smith #endif 1027d382aafbSBarry Smith 1028d382aafbSBarry Smith /*MC 1029d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1030d382aafbSBarry Smith 1031eca87e8dSBarry Smith Synopsis: 1032eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1033eca87e8dSBarry Smith 1034eca87e8dSBarry Smith Not Collective 1035eca87e8dSBarry Smith 1036d382aafbSBarry Smith Input Parameter: 1037d382aafbSBarry Smith + m1 - memory to free 1038d382aafbSBarry Smith . m2 - 2nd memory to free 1039d382aafbSBarry Smith . m3 - 3rd memory to free 1040d382aafbSBarry Smith . m4 - 4th memory to free 1041d382aafbSBarry Smith - m5 - 5th memory to free 1042d382aafbSBarry Smith 1043d382aafbSBarry Smith Level: developer 1044d382aafbSBarry Smith 1045d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 1046d382aafbSBarry Smith 1047d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1048d382aafbSBarry Smith 1049d382aafbSBarry Smith Concepts: memory allocation 1050d382aafbSBarry Smith 1051d382aafbSBarry Smith M*/ 1052d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1053d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1054d382aafbSBarry Smith #else 1055d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m1)) 1056d382aafbSBarry Smith #endif 1057d382aafbSBarry Smith 1058d382aafbSBarry Smith 1059d382aafbSBarry Smith /*MC 1060d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1061d382aafbSBarry Smith 1062eca87e8dSBarry Smith Synopsis: 1063eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1064eca87e8dSBarry Smith 1065eca87e8dSBarry Smith Not Collective 1066eca87e8dSBarry Smith 1067d382aafbSBarry Smith Input Parameter: 1068d382aafbSBarry Smith + m1 - memory to free 1069d382aafbSBarry Smith . m2 - 2nd memory to free 1070d382aafbSBarry Smith . m3 - 3rd memory to free 1071d382aafbSBarry Smith . m4 - 4th memory to free 1072d382aafbSBarry Smith . m5 - 5th memory to free 1073d382aafbSBarry Smith - m6 - 6th memory to free 1074d382aafbSBarry Smith 1075d382aafbSBarry Smith 1076d382aafbSBarry Smith Level: developer 1077d382aafbSBarry Smith 1078d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1079d382aafbSBarry Smith 1080d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1081d382aafbSBarry Smith 1082d382aafbSBarry Smith Concepts: memory allocation 1083d382aafbSBarry Smith 1084d382aafbSBarry Smith M*/ 1085d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1086d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1087d382aafbSBarry Smith #else 1088d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m1)) 1089d382aafbSBarry Smith #endif 1090d382aafbSBarry Smith 1091d382aafbSBarry Smith /*MC 1092d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1093d382aafbSBarry Smith 1094eca87e8dSBarry Smith Synopsis: 1095eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1096eca87e8dSBarry Smith 1097eca87e8dSBarry Smith Not Collective 1098eca87e8dSBarry Smith 1099d382aafbSBarry Smith Input Parameter: 1100d382aafbSBarry Smith + m1 - memory to free 1101d382aafbSBarry Smith . m2 - 2nd memory to free 1102d382aafbSBarry Smith . m3 - 3rd memory to free 1103d382aafbSBarry Smith . m4 - 4th memory to free 1104d382aafbSBarry Smith . m5 - 5th memory to free 1105d382aafbSBarry Smith . m6 - 6th memory to free 1106d382aafbSBarry Smith - m7 - 7th memory to free 1107d382aafbSBarry Smith 1108d382aafbSBarry Smith 1109d382aafbSBarry Smith Level: developer 1110d382aafbSBarry Smith 1111d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1112d382aafbSBarry Smith 1113d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1114d382aafbSBarry Smith PetscMalloc7() 1115d382aafbSBarry Smith 1116d382aafbSBarry Smith Concepts: memory allocation 1117d382aafbSBarry Smith 1118d382aafbSBarry Smith M*/ 1119d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1120d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1121d382aafbSBarry Smith #else 1122d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m1)) 1123d382aafbSBarry Smith #endif 1124d382aafbSBarry Smith 1125d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 1126d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 1127d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 1128d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocClear(void); 1129d382aafbSBarry Smith 1130d382aafbSBarry Smith /* 1131d382aafbSBarry Smith Routines for tracing memory corruption/bleeding with default PETSc 1132d382aafbSBarry Smith memory allocation 1133d382aafbSBarry Smith */ 1134d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocDump(FILE *); 1135d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocDumpLog(FILE *); 1136d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocGetCurrentUsage(PetscLogDouble *); 1137d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocGetMaximumUsage(PetscLogDouble *); 1138d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocDebug(PetscTruth); 1139d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocValidate(int,const char[],const char[],const char[]); 1140d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocSetDumpLog(void); 1141d382aafbSBarry Smith 1142d382aafbSBarry Smith 1143d382aafbSBarry Smith /* 1144d382aafbSBarry Smith Variable type where we stash PETSc object pointers in Fortran. 1145d382aafbSBarry Smith On most machines size(pointer) == sizeof(long) - except windows 1146d382aafbSBarry Smith where its sizeof(long long) 1147d382aafbSBarry Smith */ 1148d382aafbSBarry Smith 1149d382aafbSBarry Smith #if (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG) 1150d382aafbSBarry Smith #define PetscFortranAddr long 1151d382aafbSBarry Smith #elif (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG_LONG) 1152d382aafbSBarry Smith #define PetscFortranAddr long long 1153d382aafbSBarry Smith #else 1154d382aafbSBarry Smith #error "Unknown size for PetscFortranAddr! Send us a bugreport at petsc-maint@mcs.anl.gov" 1155d382aafbSBarry Smith #endif 1156d382aafbSBarry Smith 1157d382aafbSBarry Smith /*E 1158d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1159d382aafbSBarry Smith 1160d382aafbSBarry Smith Level: beginner 1161d382aafbSBarry Smith 1162d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1163d382aafbSBarry Smith 1164d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1165d382aafbSBarry Smith PetscDataTypeGetSize() 1166d382aafbSBarry Smith 1167d382aafbSBarry Smith E*/ 1168d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 1169d382aafbSBarry Smith PETSC_CHAR = 6,PETSC_LOGICAL = 7,PETSC_ENUM = 8,PETSC_TRUTH=9, PETSC_LONG_DOUBLE = 10, PETSC_QD_DD = 11} PetscDataType; 1170d382aafbSBarry Smith extern const char *PetscDataTypes[]; 1171d382aafbSBarry Smith 1172d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1173d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1174d382aafbSBarry Smith #else 1175d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1176d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 1177d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1178d382aafbSBarry Smith #define PETSC_SCALAR PETSC_LONG_DOUBLE 1179d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1180d382aafbSBarry Smith #define PETSC_SCALAR PETSC_INT 1181d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1182d382aafbSBarry Smith #define PETSC_SCALAR PETSC_QD_DD 1183d382aafbSBarry Smith #else 1184d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1185d382aafbSBarry Smith #endif 1186d382aafbSBarry Smith #endif 1187d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1188d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 1189d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1190d382aafbSBarry Smith #define PETSC_REAL PETSC_LONG_DOUBLE 1191d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1192d382aafbSBarry Smith #define PETSC_REAL PETSC_INT 1193d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1194d382aafbSBarry Smith #define PETSC_REAL PETSC_QD_DD 1195d382aafbSBarry Smith #else 1196d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1197d382aafbSBarry Smith #endif 1198d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1199d382aafbSBarry Smith 1200d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1201d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1202d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDataTypeGetSize(PetscDataType,size_t*); 1203d382aafbSBarry Smith 1204d382aafbSBarry Smith /* 1205d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1206d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1207d382aafbSBarry Smith functionality and/or error checking. 1208d382aafbSBarry Smith */ 1209d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1210d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemmove(void*,void *,size_t); 1211d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemcmp(const void*,const void*,size_t,PetscTruth *); 1212d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrlen(const char[],size_t*); 12133c311c98SBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrToArray(const char[],int*,char ***); 1214*301d30feSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrToArrayDestroy(int,char **); 1215d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrcmp(const char[],const char[],PetscTruth *); 1216d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrgrt(const char[],const char[],PetscTruth *); 1217d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrcasecmp(const char[],const char[],PetscTruth*); 1218d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrncmp(const char[],const char[],size_t,PetscTruth*); 1219d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrcpy(char[],const char[]); 1220d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrcat(char[],const char[]); 1221d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrncat(char[],const char[],size_t); 1222d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrncpy(char[],const char[],size_t); 1223d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrchr(const char[],char,char *[]); 1224d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrtolower(char[]); 1225d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrrchr(const char[],char,char *[]); 1226d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrstr(const char[],const char[],char *[]); 1227d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrrstr(const char[],const char[],char *[]); 1228d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrallocpy(const char[],char *[]); 1229d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1230d382aafbSBarry Smith 1231d382aafbSBarry Smith /*S 1232d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1233d382aafbSBarry Smith 1234d382aafbSBarry Smith Level: intermediate 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1237d382aafbSBarry Smith S*/ 1238d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1239d382aafbSBarry Smith 1240d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTokenCreate(const char[],const char,PetscToken*); 1241d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTokenFind(PetscToken,char *[]); 1242d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTokenDestroy(PetscToken); 1243d382aafbSBarry Smith 1244d382aafbSBarry Smith /* 1245d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1246d382aafbSBarry Smith */ 1247d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT MPI_Op PetscMaxSum_Op; 1248d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX) 1249d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT MPI_Op MPIU_SUM; 1250d382aafbSBarry Smith #else 1251d382aafbSBarry Smith #define MPIU_SUM MPI_SUM 1252d382aafbSBarry Smith #endif 1253d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1254d382aafbSBarry Smith 1255d382aafbSBarry Smith /*S 1256d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1257d382aafbSBarry Smith 1258d382aafbSBarry Smith Level: beginner 1259d382aafbSBarry Smith 1260d382aafbSBarry Smith Note: This is the base class from which all objects appear. 1261d382aafbSBarry Smith 12621890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1263d382aafbSBarry Smith S*/ 1264d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1265d382aafbSBarry Smith 1266d382aafbSBarry Smith /*S 1267d382aafbSBarry Smith PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1268d382aafbSBarry Smith by string name 1269d382aafbSBarry Smith 1270d382aafbSBarry Smith Level: advanced 1271d382aafbSBarry Smith 1272d382aafbSBarry Smith .seealso: PetscFListAdd(), PetscFListDestroy() 1273d382aafbSBarry Smith S*/ 1274d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList; 1275d382aafbSBarry Smith 1276d382aafbSBarry Smith /*E 1277d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1278d382aafbSBarry Smith 1279d382aafbSBarry Smith Level: beginner 1280d382aafbSBarry Smith 1281d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1282d382aafbSBarry Smith 1283d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1284d382aafbSBarry Smith 1285d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1286d382aafbSBarry Smith 1287d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1288d382aafbSBarry Smith 1289d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1290d382aafbSBarry Smith 1291d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1292d382aafbSBarry Smith E*/ 1293d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1294d382aafbSBarry Smith 1295d382aafbSBarry Smith #include "petscviewer.h" 1296d382aafbSBarry Smith #include "petscoptions.h" 1297d382aafbSBarry Smith 12980700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 12990700a824SBarry Smith extern PETSC_DLLEXPORT PetscClassId PETSC_LARGEST_CLASSID; 13000700a824SBarry Smith extern PETSC_DLLEXPORT PetscClassId PETSC_OBJECT_CLASSID; 13010700a824SBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscClassIdRegister(const char[],PetscClassId *); 1302d382aafbSBarry Smith 1303d382aafbSBarry Smith /* 1304d382aafbSBarry Smith Routines that get memory usage information from the OS 1305d382aafbSBarry Smith */ 1306d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemoryGetCurrentUsage(PetscLogDouble *); 1307d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemoryGetMaximumUsage(PetscLogDouble *); 1308d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemorySetGetMaximumUsage(void); 1309d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemoryShowUsage(PetscViewer,const char[]); 1310d382aafbSBarry Smith 1311d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInfoAllow(PetscTruth,const char []); 1312d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetTime(PetscLogDouble*); 1313d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetCPUTime(PetscLogDouble*); 1314d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSleep(PetscReal); 1315d382aafbSBarry Smith 1316d382aafbSBarry Smith /* 1317d382aafbSBarry Smith Initialization of PETSc 1318d382aafbSBarry Smith */ 1319d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInitialize(int*,char***,const char[],const char[]); 1320d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL)) 1321d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInitializeNoArguments(void); 1322d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInitialized(PetscTruth *); 1323d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFinalized(PetscTruth *); 1324d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFinalize(void); 1325d382aafbSBarry Smith EXTERN PetscErrorCode PetscInitializeFortran(void); 1326d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetArgs(int*,char ***); 1327d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetArguments(char ***); 1328d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFreeArguments(char **); 1329d382aafbSBarry Smith 1330d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscEnd(void); 1331d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInitializePackage(const char[]); 1332d382aafbSBarry Smith 1333d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD; 1334d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 1335d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPSpawn(PetscMPIInt); 1336d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPFinalize(void); 1337d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 1338d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 1339d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPFree(MPI_Comm,void*); 1340d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPMalloc(MPI_Comm,size_t,void**); 1341d382aafbSBarry Smith 1342d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPythonInitialize(const char[],const char[]); 1343d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPythonFinalize(void); 1344d382aafbSBarry Smith 1345d382aafbSBarry Smith /* 1346d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 1347d382aafbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be 1348d382aafbSBarry Smith C++. 1349d382aafbSBarry Smith */ 1350d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void); 1351d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void); 1352d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1353d382aafbSBarry Smith 1354d382aafbSBarry Smith /* 1355d382aafbSBarry Smith PetscTryMethod - Queries an object for a method, if it exists then calls it. 1356d382aafbSBarry Smith These are intended to be used only inside PETSc functions. 1357503cfb0cSBarry Smith 1358503cfb0cSBarry Smith Level: developer 1359503cfb0cSBarry Smith 1360503cfb0cSBarry Smith .seealso: PetscUseMethod() 1361d382aafbSBarry Smith */ 1362d382aafbSBarry Smith #define PetscTryMethod(obj,A,B,C) \ 1363d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1364d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1365d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1366d382aafbSBarry Smith } 1367503cfb0cSBarry Smith 1368503cfb0cSBarry Smith /* 1369503cfb0cSBarry Smith PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error. 1370503cfb0cSBarry Smith These are intended to be used only inside PETSc functions. 1371503cfb0cSBarry Smith 1372503cfb0cSBarry Smith Level: developer 1373503cfb0cSBarry Smith 1374503cfb0cSBarry Smith .seealso: PetscTryMethod() 1375503cfb0cSBarry Smith */ 1376d382aafbSBarry Smith #define PetscUseMethod(obj,A,B,C) \ 1377d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1378d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1379d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1380be015529SBarry Smith else SETERRQ1(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \ 1381d382aafbSBarry Smith } 1382503cfb0cSBarry Smith 1383d382aafbSBarry Smith /* 1384d382aafbSBarry Smith Functions that can act on any PETSc object. 1385d382aafbSBarry Smith */ 1386d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectCreate(MPI_Comm,PetscObject*); 13870700a824SBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectCreateGeneric(MPI_Comm, PetscClassId, const char [], PetscObject *); 1388d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectDestroy(PetscObject); 1389d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetComm(PetscObject,MPI_Comm *); 13903dd7c473SSatish Balay EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetClassId(PetscObject,PetscClassId *); 1391d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetType(PetscObject,const char []); 1392d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetType(PetscObject,const char *[]); 1393d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetName(PetscObject,const char[]); 1394d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetName(PetscObject,const char*[]); 1395d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetTabLevel(PetscObject,PetscInt); 1396d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetTabLevel(PetscObject,PetscInt*); 1397d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1398d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectReference(PetscObject); 1399d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetReference(PetscObject,PetscInt*); 1400d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectDereference(PetscObject); 1401d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1402d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectView(PetscObject,PetscViewer); 1403d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectCompose(PetscObject,const char[],PetscObject); 1404d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectQuery(PetscObject,const char[],PetscObject *); 1405d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 1406d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetFromOptions(PetscObject); 1407d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetUp(PetscObject); 1408d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1409d382aafbSBarry Smith 1410d382aafbSBarry Smith /*MC 1411d382aafbSBarry Smith PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1412d382aafbSBarry Smith 1413eca87e8dSBarry Smith Synopsis: 1414eca87e8dSBarry Smith PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1415eca87e8dSBarry Smith 1416d382aafbSBarry Smith Collective on PetscObject 1417d382aafbSBarry Smith 1418d382aafbSBarry Smith Input Parameters: 1419d382aafbSBarry Smith + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1420d382aafbSBarry Smith PetscObjectCompose((PetscObject)mat,...); 1421d382aafbSBarry Smith . name - name associated with the child function 1422d382aafbSBarry Smith . fname - name of the function 1423d382aafbSBarry Smith - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1424d382aafbSBarry Smith 1425d382aafbSBarry Smith Level: advanced 1426d382aafbSBarry Smith 1427d382aafbSBarry Smith 1428d382aafbSBarry Smith Notes: 1429d382aafbSBarry Smith To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1430d382aafbSBarry Smith 1431d382aafbSBarry Smith PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1432d382aafbSBarry Smith Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1433d382aafbSBarry Smith 1434d382aafbSBarry Smith The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 1435e2e64c6bSBarry Smith work in C++/complex with dynamic link libraries (./configure options --with-shared --with-dynamic) 1436d382aafbSBarry Smith enabled. 1437d382aafbSBarry Smith 1438d382aafbSBarry Smith Concepts: objects^composing functions 1439d382aafbSBarry Smith Concepts: composing functions 1440d382aafbSBarry Smith Concepts: functions^querying 1441d382aafbSBarry Smith Concepts: objects^querying 1442d382aafbSBarry Smith Concepts: querying objects 1443d382aafbSBarry Smith 1444d382aafbSBarry Smith .seealso: PetscObjectQueryFunction() 1445d382aafbSBarry Smith M*/ 1446d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1447d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1448d382aafbSBarry Smith #else 1449d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1450d382aafbSBarry Smith #endif 1451d382aafbSBarry Smith 1452d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 1453d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1454d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1455d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1456d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1457d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectPublish(PetscObject); 1458d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectChangeTypeName(PetscObject,const char[]); 1459d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectRegisterDestroy(PetscObject); 1460d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectRegisterDestroyAll(void); 1461d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectName(PetscObject); 1462d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTypeCompare(PetscObject,const char[],PetscTruth*); 1463d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRegisterFinalize(PetscErrorCode (*)(void)); 1464d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRegisterFinalizeAll(void); 1465d382aafbSBarry Smith 1466d382aafbSBarry Smith /* 1467d382aafbSBarry Smith Defines PETSc error handling. 1468d382aafbSBarry Smith */ 1469d382aafbSBarry Smith #include "petscerror.h" 1470d382aafbSBarry Smith 1471d382aafbSBarry Smith /*S 1472503cfb0cSBarry Smith PetscOList - Linked list of PETSc objects, each accessable by string name 1473d382aafbSBarry Smith 14741d0fab5eSBarry Smith Level: developer 1475d382aafbSBarry Smith 14761d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 14771d0fab5eSBarry Smith 14781d0fab5eSBarry Smith .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery() 1479d382aafbSBarry Smith S*/ 1480d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList; 1481d382aafbSBarry Smith 1482d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListDestroy(PetscOList); 1483d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListFind(PetscOList,const char[],PetscObject*); 1484d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListReverseFind(PetscOList,PetscObject,char**); 1485d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListAdd(PetscOList *,const char[],PetscObject); 1486d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListDuplicate(PetscOList,PetscOList *); 1487d382aafbSBarry Smith 1488d382aafbSBarry Smith /* 1489503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1490d382aafbSBarry Smith link libraries that will be loaded as needed. 1491d382aafbSBarry Smith */ 1492d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 1493d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListDestroy(PetscFList*); 1494d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListFind(PetscFList,MPI_Comm,const char[],void (**)(void)); 1495d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1496d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1497d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1498d382aafbSBarry Smith #else 1499d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1500d382aafbSBarry Smith #endif 1501d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListDuplicate(PetscFList,PetscFList *); 1502d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListView(PetscFList,PetscViewer); 1503d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListConcat(const char [],const char [],char []); 1504d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListGet(PetscFList,char ***,int*); 1505d382aafbSBarry Smith 1506d382aafbSBarry Smith /*S 1507d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1508d382aafbSBarry Smith 1509d382aafbSBarry Smith Level: advanced 1510d382aafbSBarry Smith 1511e2e64c6bSBarry Smith --with-shared --with-dynamic must be used with ./configure to use dynamic libraries 1512d382aafbSBarry Smith 1513d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1514d382aafbSBarry Smith S*/ 1515d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1516d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscDLLibrary DLLibrariesLoaded; 1517d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1518d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1519d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1520d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryPrintPath(PetscDLLibrary); 1521d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscTruth *); 1522d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1523d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryClose(PetscDLLibrary); 1524d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1525d382aafbSBarry Smith 1526d382aafbSBarry Smith /* 152705846914SDmitry Karpeev PetscFwk support. Needs to be documented. 152805846914SDmitry Karpeev Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc. 152905846914SDmitry Karpeev */ 153005846914SDmitry Karpeev #include "petscfwk.h" 153105846914SDmitry Karpeev 153205846914SDmitry Karpeev /* 1533d382aafbSBarry Smith Useful utility routines 1534d382aafbSBarry Smith */ 1535d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1536d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1537d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1538d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1)) 1539d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1)) 1540d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1541d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1)) 1542d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1)) 1543d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBarrier(PetscObject); 1544d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMPIDump(FILE*); 1545d382aafbSBarry Smith 1546503cfb0cSBarry Smith /* 1547503cfb0cSBarry Smith PetscNot - negates a logical type value and returns result as a PetscTruth 1548503cfb0cSBarry Smith 1549503cfb0cSBarry Smith Notes: This is useful in cases like 1550503cfb0cSBarry Smith $ int *a; 1551503cfb0cSBarry Smith $ PetscTruth flag = PetscNot(a) 1552503cfb0cSBarry Smith where !a does not return a PetscTruth because we cannot provide a cast from int to PetscTruth in C. 1553503cfb0cSBarry Smith */ 1554d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1555503cfb0cSBarry Smith 1556d382aafbSBarry Smith /* 1557d382aafbSBarry Smith Defines basic graphics available from PETSc. 1558d382aafbSBarry Smith */ 1559d382aafbSBarry Smith #include "petscdraw.h" 1560d382aafbSBarry Smith 1561d382aafbSBarry Smith /* 1562d382aafbSBarry Smith Defines the base data structures for all PETSc objects 1563d382aafbSBarry Smith */ 1564d382aafbSBarry Smith #include "private/petscimpl.h" 1565503cfb0cSBarry Smith 1566d382aafbSBarry Smith /* 1567d382aafbSBarry Smith Defines PETSc profiling. 1568d382aafbSBarry Smith */ 1569d382aafbSBarry Smith #include "petsclog.h" 1570d382aafbSBarry Smith 1571d382aafbSBarry Smith /* 1572d382aafbSBarry Smith For locking, unlocking and destroying AMS memories associated with 1573d382aafbSBarry Smith PETSc objects. Not currently used. 1574d382aafbSBarry Smith */ 1575d382aafbSBarry Smith #define PetscPublishAll(v) 0 1576d382aafbSBarry Smith #define PetscObjectTakeAccess(obj) 0 1577d382aafbSBarry Smith #define PetscObjectGrantAccess(obj) 0 1578d382aafbSBarry Smith #define PetscObjectDepublish(obj) 0 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith /* 1581d382aafbSBarry Smith Simple PETSc parallel IO for ASCII printing 1582d382aafbSBarry Smith */ 1583d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFixFilename(const char[],char[]); 1584d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1585d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFClose(MPI_Comm,FILE*); 1586d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_PRINTF_FORMAT_CHECK(3,4); 1587d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPrintf(MPI_Comm,const char[],...) PETSC_PRINTF_FORMAT_CHECK(2,3); 1588d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSNPrintf(char*,size_t,const char [],...); 1589d382aafbSBarry Smith 1590d382aafbSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1591d382aafbSBarry Smith #include <stdarg.h> 1592d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscVSNPrintf(char*,size_t,const char[],int*,va_list); 1593d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT (*PetscVFPrintf)(FILE*,const char[],va_list); 1594d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscVFPrintfDefault(FILE*,const char[],va_list); 1595d382aafbSBarry Smith 1596d382aafbSBarry Smith /*MC 1597d382aafbSBarry Smith PetscErrorPrintf - Prints error messages. 1598d382aafbSBarry Smith 1599d382aafbSBarry Smith Synopsis: 1600d382aafbSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1601d382aafbSBarry Smith 1602eca87e8dSBarry Smith Not Collective 1603eca87e8dSBarry Smith 1604d382aafbSBarry Smith Input Parameters: 1605d382aafbSBarry Smith . format - the usual printf() format string 1606d382aafbSBarry Smith 1607d382aafbSBarry Smith Options Database Keys: 1608d382aafbSBarry Smith + -error_output_stdout - cause error messages to be printed to stdout instead of the 1609d382aafbSBarry Smith (default) stderr 1610d382aafbSBarry Smith - -error_output_none to turn off all printing of error messages (does not change the way the 1611d382aafbSBarry Smith error is handled.) 1612d382aafbSBarry Smith 1613d382aafbSBarry Smith Notes: Use 1614d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1615d382aafbSBarry Smith $ error is handled.) and 1616d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1617d382aafbSBarry Smith 1618d382aafbSBarry Smith Use 1619d382aafbSBarry Smith PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1620d382aafbSBarry Smith PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1621d382aafbSBarry Smith 1622d382aafbSBarry Smith Use 1623d382aafbSBarry Smith PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1624d382aafbSBarry Smith 1625d382aafbSBarry Smith Level: developer 1626d382aafbSBarry Smith 1627d382aafbSBarry Smith Fortran Note: 1628d382aafbSBarry Smith This routine is not supported in Fortran. 1629d382aafbSBarry Smith 1630d382aafbSBarry Smith Concepts: error messages^printing 1631d382aafbSBarry Smith Concepts: printing^error messages 1632d382aafbSBarry Smith 1633d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush() 1634d382aafbSBarry Smith M*/ 1635d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1636d382aafbSBarry Smith 1637d382aafbSBarry Smith /*MC 1638d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1639d382aafbSBarry Smith 1640d382aafbSBarry Smith Synopsis: 1641d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1642d382aafbSBarry Smith 1643eca87e8dSBarry Smith Not Collective 1644eca87e8dSBarry Smith 1645d382aafbSBarry Smith Input Parameters: 1646d382aafbSBarry Smith . format - the usual printf() format string 1647d382aafbSBarry Smith 1648d382aafbSBarry Smith Level: developer 1649d382aafbSBarry Smith 1650d382aafbSBarry Smith Fortran Note: 1651d382aafbSBarry Smith This routine is not supported in Fortran. 1652d382aafbSBarry Smith 1653d382aafbSBarry Smith Concepts: help messages^printing 1654d382aafbSBarry Smith Concepts: printing^help messages 1655d382aafbSBarry Smith 1656d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1657d382aafbSBarry Smith M*/ 1658d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1659d382aafbSBarry Smith 1660d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1661d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1662d382aafbSBarry Smith EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1663d382aafbSBarry Smith 1664d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1665d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1666d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPClose(MPI_Comm,FILE*); 1667d382aafbSBarry Smith #endif 1668d382aafbSBarry Smith 1669d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSynchronizedPrintf(MPI_Comm,const char[],...) PETSC_PRINTF_FORMAT_CHECK(2,3); 1670d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_PRINTF_FORMAT_CHECK(3,4); 1671d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSynchronizedFlush(MPI_Comm); 1672d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1673d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1674d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1675d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetPetscDir(const char*[]); 1676d382aafbSBarry Smith 1677d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1678d382aafbSBarry Smith 1679d382aafbSBarry Smith /*S 1680d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1681d382aafbSBarry Smith 1682d382aafbSBarry Smith Level: advanced 1683d382aafbSBarry Smith 1684d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1685d382aafbSBarry Smith S*/ 16860700a824SBarry Smith extern PetscClassId PETSC_DLLEXPORT PETSC_CONTAINER_CLASSID; 1687d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 1688d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerGetPointer(PetscContainer,void **); 1689d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerSetPointer(PetscContainer,void *); 1690d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerDestroy(PetscContainer); 1691d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerCreate(MPI_Comm,PetscContainer *); 1692d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1693d382aafbSBarry Smith 1694d382aafbSBarry Smith /* 1695d382aafbSBarry Smith For use in debuggers 1696d382aafbSBarry Smith */ 1697d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscMPIInt PetscGlobalRank; 1698d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscMPIInt PetscGlobalSize; 1699d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1700d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1701d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1702d382aafbSBarry Smith 1703d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H) 1704d382aafbSBarry Smith #include <memory.h> 1705d382aafbSBarry Smith #endif 1706d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1707d382aafbSBarry Smith #include <stdlib.h> 1708d382aafbSBarry Smith #endif 1709d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H) 1710d382aafbSBarry Smith #include <strings.h> 1711d382aafbSBarry Smith #endif 1712d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H) 1713d382aafbSBarry Smith #include <string.h> 1714d382aafbSBarry Smith #endif 17156c7e564aSBarry Smith 17166c7e564aSBarry Smith 1717d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H) 1718d382aafbSBarry Smith #include <xmmintrin.h> 1719d382aafbSBarry Smith #endif 1720d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H) 1721d382aafbSBarry Smith #include <stdint.h> 1722d382aafbSBarry Smith #endif 1723d382aafbSBarry Smith 1724d382aafbSBarry Smith /*@C 1725d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1726d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1727d382aafbSBarry Smith PetscMemmove() in that case. 1728d382aafbSBarry Smith 1729d382aafbSBarry Smith Not Collective 1730d382aafbSBarry Smith 1731d382aafbSBarry Smith Input Parameters: 1732d382aafbSBarry Smith + b - pointer to initial memory space 1733d382aafbSBarry Smith - n - length (in bytes) of space to copy 1734d382aafbSBarry Smith 1735d382aafbSBarry Smith Output Parameter: 1736d382aafbSBarry Smith . a - pointer to copy space 1737d382aafbSBarry Smith 1738d382aafbSBarry Smith Level: intermediate 1739d382aafbSBarry Smith 1740d382aafbSBarry Smith Compile Option: 1741d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1742d382aafbSBarry Smith for memory copies on double precision values. 1743d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1744d382aafbSBarry Smith for memory copies on double precision values. 1745d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1746d382aafbSBarry Smith for memory copies on double precision values. 1747d382aafbSBarry Smith 1748d382aafbSBarry Smith Note: 1749d382aafbSBarry Smith This routine is analogous to memcpy(). 1750d382aafbSBarry Smith 1751503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1752503cfb0cSBarry Smith 1753d382aafbSBarry Smith Concepts: memory^copying 1754d382aafbSBarry Smith Concepts: copying^memory 1755d382aafbSBarry Smith 1756d382aafbSBarry Smith .seealso: PetscMemmove() 1757d382aafbSBarry Smith 1758d382aafbSBarry Smith @*/ 1759d382aafbSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PETSC_DLLEXPORT PetscMemcpy(void *a,const void *b,size_t n) 1760d382aafbSBarry Smith { 1761d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1762d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1763d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1764e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1765e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1766d382aafbSBarry Smith #endif 1767d382aafbSBarry Smith PetscFunctionBegin; 1768d382aafbSBarry Smith if (a != b) { 1769d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1770d382aafbSBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) { 1771e32f2f54SBarry Smith SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1772d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1773d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1774d382aafbSBarry Smith } 1775d382aafbSBarry Smith #endif 1776d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1777d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1778d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1779d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1780d382aafbSBarry Smith PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1781d382aafbSBarry Smith BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1782d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1783d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1784d382aafbSBarry Smith #else 1785d382aafbSBarry Smith size_t i; 1786d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1787d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1788d382aafbSBarry Smith #endif 1789d382aafbSBarry Smith } else { 1790d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1791d382aafbSBarry Smith } 1792d382aafbSBarry Smith #elif defined(PETSC_HAVE__INTEL_FAST_MEMCPY) 1793d382aafbSBarry Smith _intel_fast_memcpy((char*)(a),(char*)(b),n); 1794d382aafbSBarry Smith #else 1795d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1796d382aafbSBarry Smith #endif 1797d382aafbSBarry Smith } 1798d382aafbSBarry Smith PetscFunctionReturn(0); 1799d382aafbSBarry Smith } 1800d382aafbSBarry Smith 1801d382aafbSBarry Smith /*@C 1802d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1803d382aafbSBarry Smith 1804d382aafbSBarry Smith Not Collective 1805d382aafbSBarry Smith 1806d382aafbSBarry Smith Input Parameters: 1807d382aafbSBarry Smith + a - pointer to beginning memory location 1808d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1809d382aafbSBarry Smith 1810d382aafbSBarry Smith Level: intermediate 1811d382aafbSBarry Smith 1812d382aafbSBarry Smith Compile Option: 1813d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1814d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1815d382aafbSBarry Smith 1816503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1817503cfb0cSBarry Smith 1818d382aafbSBarry Smith Concepts: memory^zeroing 1819d382aafbSBarry Smith Concepts: zeroing^memory 1820d382aafbSBarry Smith 1821d382aafbSBarry Smith .seealso: PetscMemcpy() 1822d382aafbSBarry Smith @*/ 1823d382aafbSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PETSC_DLLEXPORT PetscMemzero(void *a,size_t n) 1824d382aafbSBarry Smith { 1825d382aafbSBarry Smith if (n > 0) { 1826d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1827e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1828d382aafbSBarry Smith #endif 1829d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1830d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1831d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1832d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1833d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1834d382aafbSBarry Smith } else { 1835d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1836d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1837d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1838d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1839d382aafbSBarry Smith } else { 1840d382aafbSBarry Smith #endif 1841d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1842d382aafbSBarry Smith bzero((char *)a,n); 1843d382aafbSBarry Smith #elif defined (PETSC_HAVE__INTEL_FAST_MEMSET) 1844d382aafbSBarry Smith _intel_fast_memset((char*)a,0,n); 1845d382aafbSBarry Smith #else 1846d382aafbSBarry Smith memset((char*)a,0,n); 1847d382aafbSBarry Smith #endif 1848d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1849d382aafbSBarry Smith } 1850d382aafbSBarry Smith #endif 1851d382aafbSBarry Smith } 1852d382aafbSBarry Smith return 0; 1853d382aafbSBarry Smith } 1854d382aafbSBarry Smith 1855d382aafbSBarry Smith /*MC 1856d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1857d382aafbSBarry Smith 1858eca87e8dSBarry Smith Synopsis: 1859eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1860eca87e8dSBarry Smith 1861d382aafbSBarry Smith Not Collective 1862d382aafbSBarry Smith 1863d382aafbSBarry Smith Input Parameters: 1864d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1865d382aafbSBarry Smith . n - number of elements to fetch 1866d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 1867d382aafbSBarry Smith - t - temporal locality (0,1,2,3), see note 1868d382aafbSBarry Smith 1869d382aafbSBarry Smith Level: developer 1870d382aafbSBarry Smith 1871d382aafbSBarry Smith Notes: 1872d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1873d382aafbSBarry Smith 1874d382aafbSBarry Smith There are four levels of temporal locality (not all architectures distinguish) 1875d382aafbSBarry Smith + 0 - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 1876d382aafbSBarry Smith . 1 - Temporal with respect to high-level cache only. Only prefetches to high-level cache (not L1), kept at high levels after eviction from L1. 1877d382aafbSBarry Smith . 2 - Same as 1, but keep in mid-level cache. (On most systems, 1 and 2 are equivalent.) 1878d382aafbSBarry Smith - 3 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 1879d382aafbSBarry Smith 1880d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1881d382aafbSBarry Smith address). 1882d382aafbSBarry Smith 1883d382aafbSBarry Smith Concepts: memory 1884d382aafbSBarry Smith M*/ 1885d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1886d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1887d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1888d382aafbSBarry Smith } while (0) 1889d382aafbSBarry Smith 1890d382aafbSBarry Smith /* 1891d382aafbSBarry Smith Allows accessing Matlab Engine 1892d382aafbSBarry Smith */ 1893d382aafbSBarry Smith #include "petscmatlab.h" 1894d382aafbSBarry Smith 1895d382aafbSBarry Smith /* 1896d382aafbSBarry Smith Determine if some of the kernel computation routines use 1897d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1898d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1899d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1900e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1901d382aafbSBarry Smith */ 1902d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1903d382aafbSBarry Smith 1904d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1905d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1906d382aafbSBarry Smith #endif 1907d382aafbSBarry Smith 1908d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCSRPERM) 1909d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCSRPERM 1910d382aafbSBarry Smith #endif 1911d382aafbSBarry Smith 1912d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1913d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1914d382aafbSBarry Smith #endif 1915d382aafbSBarry Smith 1916d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1917d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1918d382aafbSBarry Smith #endif 1919d382aafbSBarry Smith 1920d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1921d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1922d382aafbSBarry Smith #endif 1923d382aafbSBarry Smith 1924d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1925d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1926d382aafbSBarry Smith #endif 1927d382aafbSBarry Smith 1928d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1929d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1930d382aafbSBarry Smith #endif 1931d382aafbSBarry Smith 1932d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1933d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1934d382aafbSBarry Smith #endif 1935d382aafbSBarry Smith 1936d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1937d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1938d382aafbSBarry Smith #endif 1939d382aafbSBarry Smith 1940d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1941d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1942d382aafbSBarry Smith #endif 1943d382aafbSBarry Smith 1944d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1945d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1946d382aafbSBarry Smith #endif 1947d382aafbSBarry Smith 1948d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1949d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1950d382aafbSBarry Smith #endif 1951d382aafbSBarry Smith 1952d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1953d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1954d382aafbSBarry Smith #endif 1955d382aafbSBarry Smith 1956d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1957d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1958d382aafbSBarry Smith #endif 1959d382aafbSBarry Smith 1960d382aafbSBarry Smith #endif 1961d382aafbSBarry Smith 1962d382aafbSBarry Smith /* 1963d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1964d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1965d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1966d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1967d382aafbSBarry Smith ugly extern "C" {} wrappers. 1968d382aafbSBarry Smith */ 1969d382aafbSBarry Smith #if defined(__cplusplus) 1970d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1971d382aafbSBarry Smith #define EXTERN_C_END } 1972d382aafbSBarry Smith #else 1973d382aafbSBarry Smith #define EXTERN_C_BEGIN 1974d382aafbSBarry Smith #define EXTERN_C_END 1975d382aafbSBarry Smith #endif 1976d382aafbSBarry Smith 1977d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1978d382aafbSBarry Smith 1979d382aafbSBarry Smith /*MC 1980d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1981d382aafbSBarry Smith communication 1982d382aafbSBarry Smith 1983d382aafbSBarry Smith Level: beginner 1984d382aafbSBarry Smith 1985d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1986d382aafbSBarry Smith 1987d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1988d382aafbSBarry Smith M*/ 1989d382aafbSBarry Smith 1990d382aafbSBarry Smith /*MC 1991d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 1992d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 1993d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 1994d382aafbSBarry Smith 1995d382aafbSBarry Smith 1996d382aafbSBarry Smith Level: beginner 1997d382aafbSBarry Smith 1998d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 1999d382aafbSBarry Smith M*/ 2000d382aafbSBarry Smith 2001d382aafbSBarry Smith /*MC 2002d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 2003d382aafbSBarry Smith 2004d382aafbSBarry Smith Level: beginner 2005d382aafbSBarry Smith 2006d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 2007d382aafbSBarry Smith M*/ 2008d382aafbSBarry Smith 2009d382aafbSBarry Smith /*MC 2010d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 2011d382aafbSBarry Smith Level: beginner 2012d382aafbSBarry Smith 2013d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 2014d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2015d382aafbSBarry Smith 2016d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 2017d382aafbSBarry Smith M*/ 2018d382aafbSBarry Smith 2019d382aafbSBarry Smith /*MC 2020d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 2021d382aafbSBarry Smith 2022d382aafbSBarry Smith Level: beginner 2023d382aafbSBarry Smith 2024d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 2025d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2026d382aafbSBarry Smith 2027d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2028d382aafbSBarry Smith M*/ 2029d382aafbSBarry Smith 2030d382aafbSBarry Smith /*MC 2031d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2032d382aafbSBarry Smith 2033d382aafbSBarry Smith Level: beginner 2034d382aafbSBarry Smith 2035d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2036d382aafbSBarry Smith pass this value 2037d382aafbSBarry Smith 2038d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2039d382aafbSBarry Smith M*/ 2040d382aafbSBarry Smith 2041d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2042d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2043d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2044d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2045d382aafbSBarry Smith #else 2046d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2047d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2048d382aafbSBarry Smith #endif 2049d382aafbSBarry Smith #endif 2050d382aafbSBarry Smith 2051d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2052d382aafbSBarry Smith 2053d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2054d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2055d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2056d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2057d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2058d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2059d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2060d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX 2147483647 2061d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647 2062d382aafbSBarry Smith 2063d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2064e32f2f54SBarry Smith #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2065e32f2f54SBarry Smith #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2066d382aafbSBarry Smith #define PetscMPIIntCast(a) (a);PetscMPIIntCheck(a) 2067d382aafbSBarry Smith #define PetscBLASIntCast(a) (a);PetscBLASIntCheck(a) 2068d382aafbSBarry Smith 2069d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4) 2070e32f2f54SBarry Smith #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2071d382aafbSBarry Smith #define PetscHDF5IntCast(a) (a);PetscHDF5IntCheck(a) 2072d382aafbSBarry Smith #else 2073d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2074d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2075d382aafbSBarry Smith #endif 2076d382aafbSBarry Smith 2077d382aafbSBarry Smith #else 2078d382aafbSBarry Smith #define PetscMPIIntCheck(a) 2079d382aafbSBarry Smith #define PetscBLASIntCheck(a) 2080d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2081d382aafbSBarry Smith #define PetscMPIIntCast(a) a 2082d382aafbSBarry Smith #define PetscBLASIntCast(a) a 2083d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2084d382aafbSBarry Smith #endif 2085d382aafbSBarry Smith 2086d382aafbSBarry Smith 2087d382aafbSBarry Smith /* 2088d382aafbSBarry Smith The IBM include files define hz, here we hide it so that it may be used 2089d382aafbSBarry Smith as a regular user variable. 2090d382aafbSBarry Smith */ 2091d382aafbSBarry Smith #if defined(hz) 2092d382aafbSBarry Smith #undef hz 2093d382aafbSBarry Smith #endif 2094d382aafbSBarry Smith 2095d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2096d382aafbSBarry Smith 2097d382aafbSBarry Smith 2098d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2099d382aafbSBarry Smith #include <limits.h> 2100d382aafbSBarry Smith #endif 2101d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2102d382aafbSBarry Smith #include <sys/param.h> 2103d382aafbSBarry Smith #endif 2104d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2105d382aafbSBarry Smith #include <sys/types.h> 2106d382aafbSBarry Smith #endif 2107d382aafbSBarry Smith #if defined(MAXPATHLEN) 2108d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2109d382aafbSBarry Smith #elif defined(MAX_PATH) 2110d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2111d382aafbSBarry Smith #elif defined(_MAX_PATH) 2112d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2113d382aafbSBarry Smith #else 2114d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2115d382aafbSBarry Smith #endif 2116d382aafbSBarry Smith 2117d382aafbSBarry Smith /* Special support for C++ */ 2118d382aafbSBarry Smith #include "petscsys.hh" 21196c7e564aSBarry Smith 2120d382aafbSBarry Smith 2121d382aafbSBarry Smith /*MC 2122d382aafbSBarry Smith 2123d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2124d382aafbSBarry Smith 2125d382aafbSBarry Smith $ 1) classic Fortran 77 style 2126d382aafbSBarry Smith $#include "petscXXX.h" to work with material from the XXX component of PETSc 2127d382aafbSBarry Smith $ XXX variablename 2128d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2129d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2130d382aafbSBarry Smith $ 2131d382aafbSBarry Smith $ 2) classic Fortran 90 style 2132d382aafbSBarry Smith $#include "petscXXX.h" 2133d382aafbSBarry Smith $#include "petscXXX.h90" to work with material from the XXX component of PETSc 2134d382aafbSBarry Smith $ XXX variablename 2135d382aafbSBarry Smith $ 2136d382aafbSBarry Smith $ 3) Using Fortran modules 2137d382aafbSBarry Smith $#include "petscXXXdef.h" 2138d382aafbSBarry Smith $ use petscXXXX 2139d382aafbSBarry Smith $ XXX variablename 2140d382aafbSBarry Smith $ 2141d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2142d382aafbSBarry Smith $#include "petscXXXdef.h" 2143d382aafbSBarry Smith $ use petscXXXX 2144d382aafbSBarry Smith $ type(XXX) variablename 2145e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2146d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2147d382aafbSBarry Smith 2148d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2149d382aafbSBarry Smith 2150d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2151d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2152d382aafbSBarry Smith $ integer variablename 2153d382aafbSBarry Smith $ 2154d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2155d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2156d382aafbSBarry Smith 2157d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2158d382aafbSBarry Smith for only a few PETSc functions. 2159d382aafbSBarry Smith 2160d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2161d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2162d382aafbSBarry Smith you cannot have something like 2163d382aafbSBarry Smith $ PetscInt row,col 2164d382aafbSBarry Smith $ PetscScalar val 2165d382aafbSBarry Smith $ ... 2166d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2167d382aafbSBarry Smith You must instead have 2168d382aafbSBarry Smith $ PetscInt row(1),col(1) 2169d382aafbSBarry Smith $ PetscScalar val(1) 2170d382aafbSBarry Smith $ ... 2171d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2172d382aafbSBarry Smith 2173d382aafbSBarry Smith 2174d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2175d382aafbSBarry Smith 2176d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2177d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2178d382aafbSBarry Smith 2179d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2180d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2181d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2182d382aafbSBarry Smith 2183d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2184e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2185d382aafbSBarry Smith 2186d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2187d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2188d382aafbSBarry Smith 2189d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2190d382aafbSBarry Smith automatically by "make allfortranstubs". 2191d382aafbSBarry Smith 2192e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2193d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2194d382aafbSBarry Smith include their predecessors 2195d382aafbSBarry Smith 2196d382aafbSBarry Smith Level: beginner 2197d382aafbSBarry Smith 2198d382aafbSBarry Smith M*/ 2199d382aafbSBarry Smith 2200d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetArchType(char[],size_t); 2201d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetHostName(char[],size_t); 2202d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetUserName(char[],size_t); 2203d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetProgramName(char[],size_t); 2204d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetProgramName(const char[]); 2205d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetDate(char[],size_t); 2206d382aafbSBarry Smith 2207d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortInt(PetscInt,PetscInt[]); 2208d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2209d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2210d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2211d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2212d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 2213d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortReal(PetscInt,PetscReal[]); 2214d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2215d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2216d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2217d382aafbSBarry Smith 2218d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDisplay(void); 2219d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetDisplay(char[],size_t); 2220d382aafbSBarry Smith 2221d382aafbSBarry Smith /*E 2222d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2223d382aafbSBarry Smith with an optional dynamic library name, for example 2224d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2225d382aafbSBarry Smith 2226d382aafbSBarry Smith Level: beginner 2227d382aafbSBarry Smith 2228e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2229d382aafbSBarry Smith with the option --download-sprng 2230d382aafbSBarry Smith 2231d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom 2232d382aafbSBarry Smith E*/ 2233d382aafbSBarry Smith #define PetscRandomType char* 2234d382aafbSBarry Smith #define PETSCRAND "rand" 2235d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2236d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2237d382aafbSBarry Smith 2238d382aafbSBarry Smith /* Logging support */ 22390700a824SBarry Smith extern PETSC_DLLEXPORT PetscClassId PETSC_RANDOM_CLASSID; 2240d382aafbSBarry Smith 2241d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomInitializePackage(const char[]); 2242d382aafbSBarry Smith 2243d382aafbSBarry Smith /*S 2244d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2245d382aafbSBarry Smith 2246d382aafbSBarry Smith Level: intermediate 2247d382aafbSBarry Smith 2248d382aafbSBarry Smith Concepts: random numbers 2249d382aafbSBarry Smith 2250d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2251d382aafbSBarry Smith S*/ 2252d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2253d382aafbSBarry Smith 2254d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2255d382aafbSBarry Smith extern PetscFList PetscRandomList; 2256d382aafbSBarry Smith extern PetscTruth PetscRandomRegisterAllCalled; 2257d382aafbSBarry Smith 2258d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomRegisterAll(const char []); 2259d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 2260d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomRegisterDestroy(void); 2261d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSetType(PetscRandom, const PetscRandomType); 2262d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSetFromOptions(PetscRandom); 2263d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetType(PetscRandom, const PetscRandomType*); 2264d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomViewFromOptions(PetscRandom,char*); 2265d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomView(PetscRandom,PetscViewer); 2266d382aafbSBarry Smith 2267d382aafbSBarry Smith /*MC 2268d382aafbSBarry Smith PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2269d382aafbSBarry Smith 2270d382aafbSBarry Smith Synopsis: 22711890ba74SBarry Smith PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2272d382aafbSBarry Smith 2273d382aafbSBarry Smith Not Collective 2274d382aafbSBarry Smith 2275d382aafbSBarry Smith Input Parameters: 2276d382aafbSBarry Smith + name - The name of a new user-defined creation routine 2277d382aafbSBarry Smith . path - The path (either absolute or relative) of the library containing this routine 2278d382aafbSBarry Smith . func_name - The name of routine to create method context 2279d382aafbSBarry Smith - create_func - The creation routine itself 2280d382aafbSBarry Smith 2281d382aafbSBarry Smith Notes: 2282d382aafbSBarry Smith PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2283d382aafbSBarry Smith 2284d382aafbSBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2285d382aafbSBarry Smith 2286d382aafbSBarry Smith Sample usage: 2287d382aafbSBarry Smith .vb 2288d382aafbSBarry Smith PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2289d382aafbSBarry Smith .ve 2290d382aafbSBarry Smith 2291d382aafbSBarry Smith Then, your random type can be chosen with the procedural interface via 2292d382aafbSBarry Smith .vb 2293d382aafbSBarry Smith PetscRandomCreate(MPI_Comm, PetscRandom *); 2294d382aafbSBarry Smith PetscRandomSetType(PetscRandom,"my_random_name"); 2295d382aafbSBarry Smith .ve 2296d382aafbSBarry Smith or at runtime via the option 2297d382aafbSBarry Smith .vb 2298d382aafbSBarry Smith -random_type my_random_name 2299d382aafbSBarry Smith .ve 2300d382aafbSBarry Smith 2301d382aafbSBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2302d382aafbSBarry Smith 2303d382aafbSBarry Smith For an example of the code needed to interface your own random number generator see 2304d382aafbSBarry Smith src/sys/random/impls/rand/rand.c 2305d382aafbSBarry Smith 2306d382aafbSBarry Smith Level: advanced 2307d382aafbSBarry Smith 2308d382aafbSBarry Smith .keywords: PetscRandom, register 2309d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2310d382aafbSBarry Smith M*/ 2311d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2312d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2313d382aafbSBarry Smith #else 2314d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2315d382aafbSBarry Smith #endif 2316d382aafbSBarry Smith 2317d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomCreate(MPI_Comm,PetscRandom*); 2318d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetValue(PetscRandom,PetscScalar*); 2319d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetValueReal(PetscRandom,PetscReal*); 2320d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2321d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2322d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSetSeed(PetscRandom,unsigned long); 2323d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetSeed(PetscRandom,unsigned long *); 2324d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSeed(PetscRandom); 2325d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomDestroy(PetscRandom); 2326d382aafbSBarry Smith 2327d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetFullPath(const char[],char[],size_t); 2328d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetRelativePath(const char[],char[],size_t); 2329d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetWorkingDirectory(char[],size_t); 2330d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetRealPath(const char[],char[]); 2331d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetHomeDirectory(char[],size_t); 2332d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTestFile(const char[],char,PetscTruth*); 2333d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTestDirectory(const char[],char,PetscTruth*); 2334d382aafbSBarry Smith 2335d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2336d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2337d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscTruth); 2338d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscTruth); 2339d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinaryOpen(const char[],PetscFileMode,int *); 2340d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinaryClose(int); 2341d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSharedTmp(MPI_Comm,PetscTruth *); 2342d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSharedWorkingDirectory(MPI_Comm,PetscTruth *); 2343d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetTmp(MPI_Comm,char[],size_t); 2344d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscTruth*); 2345d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscLs(MPI_Comm,const char[],char[],size_t,PetscTruth*); 2346d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenSocket(char*,int,int*); 2347d382aafbSBarry Smith 2348d382aafbSBarry Smith /* 2349d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2350d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2351d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2352d382aafbSBarry Smith PetscBinarySeek(). 2353d382aafbSBarry Smith */ 2354d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2355d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2356d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2357d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2358d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2359d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2360d382aafbSBarry Smith 2361d382aafbSBarry Smith /*E 2362d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2363d382aafbSBarry Smith 2364d382aafbSBarry Smith Level: advanced 2365d382aafbSBarry Smith 2366d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2367d382aafbSBarry Smith E*/ 2368d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2369d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2370d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2371d382aafbSBarry Smith 2372d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDebugTerminal(const char[]); 2373d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDebugger(const char[],PetscTruth); 2374d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDefaultDebugger(void); 2375d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDebuggerFromString(char*); 2376d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscAttachDebugger(void); 2377d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStopForDebugger(void); 2378d382aafbSBarry Smith 2379d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2380d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2381d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2382d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2383d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2384d382aafbSBarry Smith 2385d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSSEIsEnabled(MPI_Comm,PetscTruth *,PetscTruth *); 2386d382aafbSBarry Smith 2387d382aafbSBarry Smith /*E 2388d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2389d382aafbSBarry Smith 2390d382aafbSBarry Smith Level: beginner 2391d382aafbSBarry Smith 2392d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2393d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2394d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2395d382aafbSBarry Smith E*/ 2396d382aafbSBarry Smith typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES} InsertMode; 2397d382aafbSBarry Smith 2398d382aafbSBarry Smith /*MC 2399d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2400d382aafbSBarry Smith 2401d382aafbSBarry Smith Level: beginner 2402d382aafbSBarry Smith 2403d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2404eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2405eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2406d382aafbSBarry Smith 2407d382aafbSBarry Smith M*/ 2408d382aafbSBarry Smith 2409d382aafbSBarry Smith /*MC 2410d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2411d382aafbSBarry Smith value into that location 2412d382aafbSBarry Smith 2413d382aafbSBarry Smith Level: beginner 2414d382aafbSBarry Smith 2415d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2416eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2417eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2418d382aafbSBarry Smith 2419d382aafbSBarry Smith M*/ 2420d382aafbSBarry Smith 2421d382aafbSBarry Smith /*MC 2422d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2423d382aafbSBarry Smith 2424d382aafbSBarry Smith Level: beginner 2425d382aafbSBarry Smith 2426d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2427d382aafbSBarry Smith 2428d382aafbSBarry Smith M*/ 2429d382aafbSBarry Smith 2430d382aafbSBarry Smith /*S 2431d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2432d382aafbSBarry Smith 2433d382aafbSBarry Smith Level: advanced 2434d382aafbSBarry Smith 2435d382aafbSBarry Smith Concepts: communicator, create 2436d382aafbSBarry Smith S*/ 2437d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2438d382aafbSBarry Smith 2439d382aafbSBarry Smith struct _n_PetscSubcomm { 2440d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2441d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2442d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 2443d382aafbSBarry Smith PetscInt n; /* num of subcommunicators under the parent communicator */ 2444d382aafbSBarry Smith PetscInt color; /* color of processors belong to this communicator */ 2445d382aafbSBarry Smith }; 2446d382aafbSBarry Smith 2447d382aafbSBarry Smith EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommCreate(MPI_Comm,PetscInt,PetscSubcomm*); 2448d382aafbSBarry Smith EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommDestroy(PetscSubcomm); 2449d382aafbSBarry Smith 2450d382aafbSBarry Smith PETSC_EXTERN_CXX_END 24516c7e564aSBarry Smith 2452d382aafbSBarry Smith #endif 2453