1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith # endif 25216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith # define _BSD_SOURCE 2773fca5a0SBarry Smith # endif 2807f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay # define _DEFAULT_SOURCE 3007f00807SSatish Balay # endif 31ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar # define _GNU_SOURCE 33ea0fecefSShri Abhyankar # endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36df4397b0SStefano Zampini #include <petscsystypes.h> 37df4397b0SStefano Zampini 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 402c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 41d382aafbSBarry Smith */ 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48c5e4d11fSDmitry Karpeev /* ========================================================================== */ 49c5e4d11fSDmitry Karpeev /* 50c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 511cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 521cc8b206SBarry Smith file within an extern "C". 53c5e4d11fSDmitry Karpeev */ 54c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 55c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 56c5e4d11fSDmitry Karpeev #endif 57c5e4d11fSDmitry Karpeev 58ed938b00SJed Brown #if defined(__cplusplus) 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 60ed938b00SJed Brown #else 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 62ed938b00SJed Brown #endif 63ed938b00SJed Brown 64ed938b00SJed Brown #if defined(__cplusplus) 6558c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 66ed938b00SJed Brown #else 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 7058c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7158c433abSLisandro Dalcin 72ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 73014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 74014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7726703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7826703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7926703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 81014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 82014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 84d382aafbSBarry Smith #else 85014dd563SJed Brown # define PETSC_DLLEXPORT 86014dd563SJed Brown # define PETSC_DLLIMPORT 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 88014dd563SJed Brown #endif 89014dd563SJed Brown 90014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 91014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 92014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 94014dd563SJed Brown #endif 95014dd563SJed Brown 961cc8b206SBarry Smith /* 971cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 981cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 991cc8b206SBarry Smith used from C and are always visible in the shared libraries 1001cc8b206SBarry Smith */ 1012c280183SJed Brown #if defined(__cplusplus) 102014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 103638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10421f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 105014dd563SJed Brown #else 106014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1086258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 109d382aafbSBarry Smith #endif 11027710113SBarry Smith 1112c8e378dSBarry Smith #include <petscversion.h> 112a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 113d382aafbSBarry Smith 114d382aafbSBarry Smith /* ========================================================================== */ 115d382aafbSBarry Smith 116d382aafbSBarry Smith /* 117d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 118d382aafbSBarry Smith 119d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 120d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 121d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 122d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 123d382aafbSBarry Smith mpicxx.h directly in their code 124d382aafbSBarry Smith */ 125fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 126d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 127fa9e63e2SJed Brown #endif 128fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 129d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 130fa9e63e2SJed Brown #endif 131e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 132e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 133e771154cSJed Brown #else 1342c8e378dSBarry Smith # include <mpi.h> 135e771154cSJed Brown #endif 13665013866SBarry Smith 137d382aafbSBarry Smith /* 138a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 139a7886beaSBarry Smith This usually happens because 140a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 141a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 142a7886beaSBarry Smith */ 143a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 144c9b973beSBarry Smith # if !defined(MPIUNI_H) 145a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 146a7886beaSBarry Smith # endif 14741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 14841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 14941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 15041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 15141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 15241f4af4cSSatish Balay # endif 15341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 15441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 15541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 15641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 15741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 15841f4af4cSSatish Balay # endif 159a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 16041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 161a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 162ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 163a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 164a7886beaSBarry Smith # endif 165a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 166a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 167a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 168ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 169c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 170a7886beaSBarry Smith # endif 171d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 172d97fd468SStefano Zampini # if !defined(MSMPI_VER) 173d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 174d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 175d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 176d97fd468SStefano Zampini # endif 177d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 178d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 179a7886beaSBarry Smith #endif 180a7886beaSBarry Smith 181a7886beaSBarry Smith /* 1822981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 183d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 184d382aafbSBarry Smith */ 185d382aafbSBarry Smith #include <stdio.h> 186d382aafbSBarry Smith 187d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 188d382aafbSBarry Smith #if !defined(MPIAPI) 189d382aafbSBarry Smith #define MPIAPI 190d382aafbSBarry Smith #endif 191d382aafbSBarry Smith 1921cc8b206SBarry Smith /* 1931cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1941cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1951cc8b206SBarry Smith does not match the actual type of the argument being passed in 1961cc8b206SBarry Smith */ 197c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 198894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 199894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2008ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2018ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 202894dd566SJed Brown # endif 203894dd566SJed Brown #endif 204894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 205894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2068ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2078ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 208894dd566SJed Brown #endif 209b3506946SBarry Smith 2105a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 211df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 212e28ce29aSPatrick Sanan 213e28ce29aSPatrick Sanan /*MC 214e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 215e28ce29aSPatrick Sanan 216e28ce29aSPatrick Sanan Notes: 217e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 218e28ce29aSPatrick Sanan 219e28ce29aSPatrick Sanan Level: beginner 220e28ce29aSPatrick Sanan 221e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 222e28ce29aSPatrick Sanan M*/ 223e28ce29aSPatrick Sanan 22437354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 225bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 226a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 227fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 228bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 229a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 230f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 231bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 232a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 233236ed0a3SSatish Balay #else 234bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 235236ed0a3SSatish Balay #endif 236b7b8f77aSBarry Smith 2377cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 238b7b8f77aSBarry Smith 239d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 240bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 241a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 242d382aafbSBarry Smith #else 243d382aafbSBarry Smith # define MPIU_INT MPI_INT 244a05e1a72SSatish Balay # define PetscInt_FMT "d" 245d382aafbSBarry Smith #endif 246d382aafbSBarry Smith 247503cfb0cSBarry Smith /* 248503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 249503cfb0cSBarry Smith */ 250e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 251d382aafbSBarry Smith 252d382aafbSBarry Smith /* 253d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 254d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 255d382aafbSBarry Smith */ 256014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 257d382aafbSBarry Smith 258d382aafbSBarry Smith /* 259d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 260d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 261d382aafbSBarry Smith */ 262014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 263d382aafbSBarry Smith 264d382aafbSBarry Smith /*MC 265d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 266d382aafbSBarry Smith 267d382aafbSBarry Smith Synopsis: 268aaa7dc30SBarry Smith #include <petscsys.h> 269ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 270d382aafbSBarry Smith 271eca87e8dSBarry Smith Not Collective 272eca87e8dSBarry Smith 273d382aafbSBarry Smith Input Parameters: 274d382aafbSBarry Smith . cond - condition or expression 275d382aafbSBarry Smith 276e28ce29aSPatrick Sanan Notes: 277e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 278d382aafbSBarry Smith branch is unlikely. 279d382aafbSBarry Smith 280d382aafbSBarry Smith Level: advanced 281d382aafbSBarry Smith 282d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 283d382aafbSBarry Smith M*/ 284d382aafbSBarry Smith 285d382aafbSBarry Smith /*MC 286d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 287d382aafbSBarry Smith 288d382aafbSBarry Smith Synopsis: 289aaa7dc30SBarry Smith #include <petscsys.h> 29023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 291d382aafbSBarry Smith 292eca87e8dSBarry Smith Not Collective 293eca87e8dSBarry Smith 294d382aafbSBarry Smith Input Parameters: 295d382aafbSBarry Smith . cond - condition or expression 296d382aafbSBarry Smith 297e28ce29aSPatrick Sanan Notes: 298e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 299d382aafbSBarry Smith branch is likely. 300d382aafbSBarry Smith 301d382aafbSBarry Smith Level: advanced 302d382aafbSBarry Smith 303d382aafbSBarry Smith .seealso: PetscUnlikely() 304d382aafbSBarry Smith M*/ 305d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 306d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 307d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 308d382aafbSBarry Smith #else 309cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 310cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 311d382aafbSBarry Smith #endif 312d382aafbSBarry Smith 313d382aafbSBarry Smith /* 314d382aafbSBarry Smith Declare extern C stuff after including external header files 315d382aafbSBarry Smith */ 316d382aafbSBarry Smith 3176a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 31870b3c8c7SBarry Smith 3198b49ba18SBarry Smith /* 320390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 3218b49ba18SBarry Smith */ 3228b49ba18SBarry Smith #include <petscmath.h> 3238b49ba18SBarry Smith 3246a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 325d382aafbSBarry Smith 326d382aafbSBarry Smith /*MC 3270298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 328d382aafbSBarry Smith 329d382aafbSBarry Smith Level: beginner 330d382aafbSBarry Smith 331e28ce29aSPatrick Sanan Note: 332e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 333d382aafbSBarry Smith some default 334d382aafbSBarry Smith 335e28ce29aSPatrick Sanan Fortran Notes: 336e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 337d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 338d382aafbSBarry Smith 339e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 340d382aafbSBarry Smith 341d382aafbSBarry Smith M*/ 3420298fd71SBarry Smith #define PETSC_IGNORE NULL 343d382aafbSBarry Smith 344c528d872SBarry Smith /* This is deprecated */ 345c528d872SBarry Smith #define PETSC_NULL NULL 346c528d872SBarry Smith 347d382aafbSBarry Smith /*MC 348557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 349557d4da8SBarry Smith where you wish PETSc to use the default. 350557d4da8SBarry Smith 351557d4da8SBarry Smith Level: beginner 352557d4da8SBarry Smith 353e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 354557d4da8SBarry Smith 355557d4da8SBarry Smith M*/ 356557d4da8SBarry Smith #define PETSC_DECIDE -1 357557d4da8SBarry Smith 358557d4da8SBarry Smith /*MC 359d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 360d382aafbSBarry Smith where you wish PETSc to compute the required value. 361d382aafbSBarry Smith 362d382aafbSBarry Smith Level: beginner 363d382aafbSBarry Smith 364e28ce29aSPatrick Sanan Developer Note: 365e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 366557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 367557d4da8SBarry Smith 3680298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 369d382aafbSBarry Smith 370d382aafbSBarry Smith M*/ 371d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 372d382aafbSBarry Smith 373d382aafbSBarry Smith /*MC 374557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 375557d4da8SBarry Smith where you wish PETSc to use the default. 376557d4da8SBarry Smith 377557d4da8SBarry Smith Level: beginner 378557d4da8SBarry Smith 379e28ce29aSPatrick Sanan Fortran Notes: 380e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 381557d4da8SBarry Smith 3820298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 383557d4da8SBarry Smith 384557d4da8SBarry Smith M*/ 385557d4da8SBarry Smith #define PETSC_DEFAULT -2 386557d4da8SBarry Smith 387557d4da8SBarry Smith /*MC 388d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 389ea8fe74dSBarry Smith all the processes that PETSc knows about. 390d382aafbSBarry Smith 391d382aafbSBarry Smith Level: beginner 392d382aafbSBarry Smith 393e28ce29aSPatrick Sanan Notes: 394e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 395d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 396d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 397a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 398a990b902SBarry Smith 399a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 400a990b902SBarry Smith is called because it may not have a valid value yet. 401d382aafbSBarry Smith 402d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 403d382aafbSBarry Smith 404d382aafbSBarry Smith M*/ 405014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 406d382aafbSBarry Smith 407d382aafbSBarry Smith /*MC 408503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 409d382aafbSBarry Smith 410d382aafbSBarry Smith Level: beginner 411d382aafbSBarry Smith 412e28ce29aSPatrick Sanan Notes: 413e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 414a990b902SBarry Smith 415d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 416d382aafbSBarry Smith 417d382aafbSBarry Smith M*/ 418d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 419d382aafbSBarry Smith 420d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 421014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 422014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 4234cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 42482f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 425d382aafbSBarry Smith 426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 429d382aafbSBarry Smith 4307381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 4317381773fSBarry Smith PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm); 4327381773fSBarry Smith #endif 4337381773fSBarry Smith 434d382aafbSBarry Smith /*MC 43595dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 436d382aafbSBarry Smith 437eca87e8dSBarry Smith Synopsis: 438aaa7dc30SBarry Smith #include <petscsys.h> 439eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 440eca87e8dSBarry Smith 441eca87e8dSBarry Smith Not Collective 442eca87e8dSBarry Smith 443d382aafbSBarry Smith Input Parameter: 444d382aafbSBarry Smith . m - number of bytes to allocate 445d382aafbSBarry Smith 446d382aafbSBarry Smith Output Parameter: 447d382aafbSBarry Smith . result - memory allocated 448d382aafbSBarry Smith 449d382aafbSBarry Smith Level: beginner 450d382aafbSBarry Smith 45149d7da52SJed Brown Notes: 45249d7da52SJed Brown Memory is always allocated at least double aligned 453d382aafbSBarry Smith 45449d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 455d382aafbSBarry Smith 456d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 459071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 460d382aafbSBarry Smith 461d382aafbSBarry Smith /*MC 4623221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 4633221ece2SMatthew G. Knepley 4643221ece2SMatthew G. Knepley Synopsis: 4653221ece2SMatthew G. Knepley #include <petscsys.h> 4663221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 4673221ece2SMatthew G. Knepley 4683221ece2SMatthew G. Knepley Not Collective 4693221ece2SMatthew G. Knepley 4703221ece2SMatthew G. Knepley Input Parameters: 4713221ece2SMatthew G. Knepley + m - number of bytes to allocate 47292f119d6SBarry Smith - result - previous memory 4733221ece2SMatthew G. Knepley 4743221ece2SMatthew G. Knepley Output Parameter: 4753221ece2SMatthew G. Knepley . result - new memory allocated 4763221ece2SMatthew G. Knepley 4773221ece2SMatthew G. Knepley Level: developer 4783221ece2SMatthew G. Knepley 4793221ece2SMatthew G. Knepley Notes: 4803221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 4813221ece2SMatthew G. Knepley 4823221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 4833221ece2SMatthew G. Knepley 4843221ece2SMatthew G. Knepley M*/ 4853221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 4863221ece2SMatthew G. Knepley 4873221ece2SMatthew G. Knepley /*MC 488503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 489d382aafbSBarry Smith 490d382aafbSBarry Smith Synopsis: 491aaa7dc30SBarry Smith #include <petscsys.h> 492d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 493d382aafbSBarry Smith 494eca87e8dSBarry Smith Not Collective 495eca87e8dSBarry Smith 496eca87e8dSBarry Smith Input Parameters: 497eca87e8dSBarry Smith . addr - address to align (any pointer type) 498eca87e8dSBarry Smith 499d382aafbSBarry Smith Level: developer 500d382aafbSBarry Smith 501d382aafbSBarry Smith .seealso: PetscMallocAlign() 502d382aafbSBarry Smith 503d382aafbSBarry Smith M*/ 504d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 505d382aafbSBarry Smith 506d382aafbSBarry Smith /*MC 507785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 508d382aafbSBarry Smith 509eca87e8dSBarry Smith Synopsis: 510aaa7dc30SBarry Smith #include <petscsys.h> 511785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 512785e854fSJed Brown 513785e854fSJed Brown Not Collective 514785e854fSJed Brown 515785e854fSJed Brown Input Parameter: 516390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 517785e854fSJed Brown 518785e854fSJed Brown Output Parameter: 5191fe1b817SJunchao Zhang . r1 - memory allocated 520785e854fSJed Brown 521e28ce29aSPatrick Sanan Note: 522e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 523390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 524390e1bf2SBarry Smith $ PetscInt *id; 525390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 526390e1bf2SBarry Smith not 527390e1bf2SBarry Smith $ PetscInt *id; 528390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 529390e1bf2SBarry Smith 5301fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 531390e1bf2SBarry Smith 532390e1bf2SBarry Smith Level: beginner 533785e854fSJed Brown 5341795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 535785e854fSJed Brown 536785e854fSJed Brown M*/ 5372553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 538785e854fSJed Brown 539785e854fSJed Brown /*MC 5401795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 5411795a4d1SJed Brown 5421795a4d1SJed Brown Synopsis: 543aaa7dc30SBarry Smith #include <petscsys.h> 5441795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 5451795a4d1SJed Brown 5461795a4d1SJed Brown Not Collective 5471795a4d1SJed Brown 5481795a4d1SJed Brown Input Parameter: 5491795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5501795a4d1SJed Brown 5511795a4d1SJed Brown Output Parameter: 5521fe1b817SJunchao Zhang . r1 - memory allocated 5531795a4d1SJed Brown 554e28ce29aSPatrick Sanan Notes: 555e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 556390e1bf2SBarry Smith 557390e1bf2SBarry Smith Level: beginner 5581795a4d1SJed Brown 5591795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 5601795a4d1SJed Brown 5611795a4d1SJed Brown M*/ 5622553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 5631795a4d1SJed Brown 5641795a4d1SJed Brown /*MC 565dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 566d382aafbSBarry Smith 567eca87e8dSBarry Smith Synopsis: 568aaa7dc30SBarry Smith #include <petscsys.h> 569dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 570eca87e8dSBarry Smith 571eca87e8dSBarry Smith Not Collective 572eca87e8dSBarry Smith 573d382aafbSBarry Smith Input Parameter: 574d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 575dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 576d382aafbSBarry Smith 577d382aafbSBarry Smith Output Parameter: 578d382aafbSBarry Smith + r1 - memory allocated in first chunk 579d382aafbSBarry Smith - r2 - memory allocated in second chunk 580d382aafbSBarry Smith 581d382aafbSBarry Smith Level: developer 582d382aafbSBarry Smith 5831795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 584d382aafbSBarry Smith 585d382aafbSBarry Smith M*/ 5862553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 587d382aafbSBarry Smith 588d382aafbSBarry Smith /*MC 5891795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 590d382aafbSBarry Smith 591eca87e8dSBarry Smith Synopsis: 592aaa7dc30SBarry Smith #include <petscsys.h> 5931795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 594eca87e8dSBarry Smith 595eca87e8dSBarry Smith Not Collective 596eca87e8dSBarry Smith 597d382aafbSBarry Smith Input Parameter: 598d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5991795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 6001795a4d1SJed Brown 6011795a4d1SJed Brown Output Parameter: 6021795a4d1SJed Brown + r1 - memory allocated in first chunk 6031795a4d1SJed Brown - r2 - memory allocated in second chunk 6041795a4d1SJed Brown 6051795a4d1SJed Brown Level: developer 6061795a4d1SJed Brown 6071795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 6081795a4d1SJed Brown 6091795a4d1SJed Brown M*/ 6102553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 6111795a4d1SJed Brown 6121795a4d1SJed Brown /*MC 613dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 614d382aafbSBarry Smith 615d382aafbSBarry Smith Synopsis: 616aaa7dc30SBarry Smith #include <petscsys.h> 617dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 618d382aafbSBarry Smith 619d382aafbSBarry Smith Not Collective 620d382aafbSBarry Smith 621d382aafbSBarry Smith Input Parameter: 622d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 623d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 624dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 625d382aafbSBarry Smith 626d382aafbSBarry Smith Output Parameter: 627d382aafbSBarry Smith + r1 - memory allocated in first chunk 628d382aafbSBarry Smith . r2 - memory allocated in second chunk 629d382aafbSBarry Smith - r3 - memory allocated in third chunk 630d382aafbSBarry Smith 631d382aafbSBarry Smith Level: developer 632d382aafbSBarry Smith 6331795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 634d382aafbSBarry Smith 635d382aafbSBarry Smith M*/ 6362553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 637d382aafbSBarry Smith 638d382aafbSBarry Smith /*MC 6391795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 640d382aafbSBarry Smith 641eca87e8dSBarry Smith Synopsis: 642aaa7dc30SBarry Smith #include <petscsys.h> 6431795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 644eca87e8dSBarry Smith 645eca87e8dSBarry Smith Not Collective 646eca87e8dSBarry Smith 647d382aafbSBarry Smith Input Parameter: 648d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 649d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 6501795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 6511795a4d1SJed Brown 6521795a4d1SJed Brown Output Parameter: 6531795a4d1SJed Brown + r1 - memory allocated in first chunk 6541795a4d1SJed Brown . r2 - memory allocated in second chunk 6551795a4d1SJed Brown - r3 - memory allocated in third chunk 6561795a4d1SJed Brown 6571795a4d1SJed Brown Level: developer 6581795a4d1SJed Brown 6591795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 6601795a4d1SJed Brown 6611795a4d1SJed Brown M*/ 6622553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 6631795a4d1SJed Brown 6641795a4d1SJed Brown /*MC 665dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 666d382aafbSBarry Smith 667d382aafbSBarry Smith Synopsis: 668aaa7dc30SBarry Smith #include <petscsys.h> 669dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 670d382aafbSBarry Smith 671d382aafbSBarry Smith Not Collective 672d382aafbSBarry Smith 673d382aafbSBarry Smith Input Parameter: 674d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 675d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 676d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 677dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 678d382aafbSBarry Smith 679d382aafbSBarry Smith Output Parameter: 680d382aafbSBarry Smith + r1 - memory allocated in first chunk 681d382aafbSBarry Smith . r2 - memory allocated in second chunk 682d382aafbSBarry Smith . r3 - memory allocated in third chunk 683d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 684d382aafbSBarry Smith 685d382aafbSBarry Smith Level: developer 686d382aafbSBarry Smith 6871795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 688d382aafbSBarry Smith 689d382aafbSBarry Smith M*/ 6902553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 691d382aafbSBarry Smith 692d382aafbSBarry Smith /*MC 6931795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 694d382aafbSBarry Smith 695eca87e8dSBarry Smith Synopsis: 696aaa7dc30SBarry Smith #include <petscsys.h> 6971795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 698eca87e8dSBarry Smith 699eca87e8dSBarry Smith Not Collective 700eca87e8dSBarry Smith 701e28ce29aSPatrick Sanan Input Parameters: 702d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 703d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 704d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 7051795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 7061795a4d1SJed Brown 707e28ce29aSPatrick Sanan Output Parameters: 7081795a4d1SJed Brown + r1 - memory allocated in first chunk 7091795a4d1SJed Brown . r2 - memory allocated in second chunk 7101795a4d1SJed Brown . r3 - memory allocated in third chunk 7111795a4d1SJed Brown - r4 - memory allocated in fourth chunk 7121795a4d1SJed Brown 7131795a4d1SJed Brown Level: developer 7141795a4d1SJed Brown 7151795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 7161795a4d1SJed Brown 7171795a4d1SJed Brown M*/ 7182553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 7191795a4d1SJed Brown 7201795a4d1SJed Brown /*MC 721dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 722d382aafbSBarry Smith 723d382aafbSBarry Smith Synopsis: 724aaa7dc30SBarry Smith #include <petscsys.h> 725dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 726d382aafbSBarry Smith 727d382aafbSBarry Smith Not Collective 728d382aafbSBarry Smith 729e28ce29aSPatrick Sanan Input Parameters: 730d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 731d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 732d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 733d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 734dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 735d382aafbSBarry Smith 736e28ce29aSPatrick Sanan Output Parameters: 737d382aafbSBarry Smith + r1 - memory allocated in first chunk 738d382aafbSBarry Smith . r2 - memory allocated in second chunk 739d382aafbSBarry Smith . r3 - memory allocated in third chunk 740d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 741d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 742d382aafbSBarry Smith 743d382aafbSBarry Smith Level: developer 744d382aafbSBarry Smith 7451795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 746d382aafbSBarry Smith 747d382aafbSBarry Smith M*/ 7482553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 749d382aafbSBarry Smith 750d382aafbSBarry Smith /*MC 7511795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 752d382aafbSBarry Smith 753eca87e8dSBarry Smith Synopsis: 754aaa7dc30SBarry Smith #include <petscsys.h> 7551795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 756eca87e8dSBarry Smith 757eca87e8dSBarry Smith Not Collective 758eca87e8dSBarry Smith 759e28ce29aSPatrick Sanan Input Parameters: 760d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 761d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 762d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 763d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7641795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7651795a4d1SJed Brown 766e28ce29aSPatrick Sanan Output Parameters: 7671795a4d1SJed Brown + r1 - memory allocated in first chunk 7681795a4d1SJed Brown . r2 - memory allocated in second chunk 7691795a4d1SJed Brown . r3 - memory allocated in third chunk 7701795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7711795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7721795a4d1SJed Brown 7731795a4d1SJed Brown Level: developer 7741795a4d1SJed Brown 7751795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 7761795a4d1SJed Brown 7771795a4d1SJed Brown M*/ 7782553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 779d382aafbSBarry Smith 780d382aafbSBarry Smith /*MC 781dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 782d382aafbSBarry Smith 783d382aafbSBarry Smith Synopsis: 784aaa7dc30SBarry Smith #include <petscsys.h> 785dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 786d382aafbSBarry Smith 787d382aafbSBarry Smith Not Collective 788d382aafbSBarry Smith 789e28ce29aSPatrick Sanan Input Parameters: 790d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 791d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 792d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 793d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 794d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 795dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 796d382aafbSBarry Smith 797e28ce29aSPatrick Sanan Output Parameteasr: 798d382aafbSBarry Smith + r1 - memory allocated in first chunk 799d382aafbSBarry Smith . r2 - memory allocated in second chunk 800d382aafbSBarry Smith . r3 - memory allocated in third chunk 801d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 802d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 803d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 804d382aafbSBarry Smith 805d382aafbSBarry Smith Level: developer 806d382aafbSBarry Smith 8071795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 808d382aafbSBarry Smith 809d382aafbSBarry Smith M*/ 8102553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 811d382aafbSBarry Smith 812d382aafbSBarry Smith /*MC 8131795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 814d382aafbSBarry Smith 815eca87e8dSBarry Smith Synopsis: 816aaa7dc30SBarry Smith #include <petscsys.h> 8171795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 818eca87e8dSBarry Smith 819eca87e8dSBarry Smith Not Collective 820eca87e8dSBarry Smith 821e28ce29aSPatrick Sanan Input Parameters: 822d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 823d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 824d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 825d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 826d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 8271795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 8281795a4d1SJed Brown 829e28ce29aSPatrick Sanan Output Parameters: 8301795a4d1SJed Brown + r1 - memory allocated in first chunk 8311795a4d1SJed Brown . r2 - memory allocated in second chunk 8321795a4d1SJed Brown . r3 - memory allocated in third chunk 8331795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8341795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8351795a4d1SJed Brown - r6 - memory allocated in sixth chunk 8361795a4d1SJed Brown 8371795a4d1SJed Brown Level: developer 8381795a4d1SJed Brown 8391795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 8401795a4d1SJed Brown 8411795a4d1SJed Brown M*/ 8422553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 8431795a4d1SJed Brown 8441795a4d1SJed Brown /*MC 845dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 846d382aafbSBarry Smith 847d382aafbSBarry Smith Synopsis: 848aaa7dc30SBarry Smith #include <petscsys.h> 849dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 850d382aafbSBarry Smith 851d382aafbSBarry Smith Not Collective 852d382aafbSBarry Smith 853e28ce29aSPatrick Sanan Input Parameters: 854d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 855d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 856d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 857d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 858d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 859d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 860dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 861d382aafbSBarry Smith 862e28ce29aSPatrick Sanan Output Parameters: 863d382aafbSBarry Smith + r1 - memory allocated in first chunk 864d382aafbSBarry Smith . r2 - memory allocated in second chunk 865d382aafbSBarry Smith . r3 - memory allocated in third chunk 866d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 867d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 868d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 869eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 870d382aafbSBarry Smith 871d382aafbSBarry Smith Level: developer 872d382aafbSBarry Smith 8731795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 874d382aafbSBarry Smith 875d382aafbSBarry Smith M*/ 8762553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 877d382aafbSBarry Smith 878d382aafbSBarry Smith /*MC 8791795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 8801795a4d1SJed Brown 8811795a4d1SJed Brown Synopsis: 882aaa7dc30SBarry Smith #include <petscsys.h> 8831795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8841795a4d1SJed Brown 8851795a4d1SJed Brown Not Collective 8861795a4d1SJed Brown 887e28ce29aSPatrick Sanan Input Parameters: 8881795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8891795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8901795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8911795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8921795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8931795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8941795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8951795a4d1SJed Brown 896e28ce29aSPatrick Sanan Output Parameters: 8971795a4d1SJed Brown + r1 - memory allocated in first chunk 8981795a4d1SJed Brown . r2 - memory allocated in second chunk 8991795a4d1SJed Brown . r3 - memory allocated in third chunk 9001795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9011795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9021795a4d1SJed Brown . r6 - memory allocated in sixth chunk 9031795a4d1SJed Brown - r7 - memory allocated in seventh chunk 9041795a4d1SJed Brown 9051795a4d1SJed Brown Level: developer 9061795a4d1SJed Brown 9071795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 9081795a4d1SJed Brown 9091795a4d1SJed Brown M*/ 9102553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 9111795a4d1SJed Brown 9121795a4d1SJed Brown /*MC 913503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 914d382aafbSBarry Smith 915eca87e8dSBarry Smith Synopsis: 916aaa7dc30SBarry Smith #include <petscsys.h> 917b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 918eca87e8dSBarry Smith 919eca87e8dSBarry Smith Not Collective 920eca87e8dSBarry Smith 921d382aafbSBarry Smith Output Parameter: 922b00a9115SJed Brown . result - memory allocated, sized to match pointer type 923d382aafbSBarry Smith 924d382aafbSBarry Smith Level: beginner 925d382aafbSBarry Smith 926390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 927d382aafbSBarry Smith 928d382aafbSBarry Smith M*/ 929b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 930ad0619ddSBarry Smith 931ad0619ddSBarry Smith /*MC 932b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 933ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 934ad0619ddSBarry Smith 935ad0619ddSBarry Smith Synopsis: 936aaa7dc30SBarry Smith #include <petscsys.h> 937b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 938ad0619ddSBarry Smith 939ad0619ddSBarry Smith Not Collective 940ad0619ddSBarry Smith 941ad0619ddSBarry Smith Input Parameter: 942b00a9115SJed Brown . obj - object memory is logged to 943ad0619ddSBarry Smith 944ad0619ddSBarry Smith Output Parameter: 945b00a9115SJed Brown . result - memory allocated, sized to match pointer type 946ad0619ddSBarry Smith 947ad0619ddSBarry Smith Level: developer 948ad0619ddSBarry Smith 949390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 950ad0619ddSBarry Smith 951ad0619ddSBarry Smith M*/ 952d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 953d382aafbSBarry Smith 954d382aafbSBarry Smith /*MC 955d382aafbSBarry Smith PetscFree - Frees memory 956d382aafbSBarry Smith 957eca87e8dSBarry Smith Synopsis: 958aaa7dc30SBarry Smith #include <petscsys.h> 959eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 960eca87e8dSBarry Smith 961eca87e8dSBarry Smith Not Collective 962eca87e8dSBarry Smith 963d382aafbSBarry Smith Input Parameter: 9647f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 965d382aafbSBarry Smith 966d382aafbSBarry Smith Level: beginner 967d382aafbSBarry Smith 96849d7da52SJed Brown Notes: 969390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 970390e1bf2SBarry Smith 97149d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 972d382aafbSBarry Smith 973390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 974d382aafbSBarry Smith 975d382aafbSBarry Smith M*/ 976ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 977d382aafbSBarry Smith 978d382aafbSBarry Smith /*MC 979d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 980d382aafbSBarry Smith 981eca87e8dSBarry Smith Synopsis: 982aaa7dc30SBarry Smith #include <petscsys.h> 983eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 984eca87e8dSBarry Smith 985eca87e8dSBarry Smith Not Collective 986eca87e8dSBarry Smith 987e28ce29aSPatrick Sanan Input Parameters: 988d382aafbSBarry Smith + memory1 - memory to free 989d382aafbSBarry Smith - memory2 - 2nd memory to free 990d382aafbSBarry Smith 991d382aafbSBarry Smith Level: developer 992d382aafbSBarry Smith 99395452b02SPatrick Sanan Notes: 99495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 995d382aafbSBarry Smith 996d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 997d382aafbSBarry Smith 998d382aafbSBarry Smith M*/ 999ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1000d382aafbSBarry Smith 1001d382aafbSBarry Smith /*MC 1002d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1003d382aafbSBarry Smith 1004eca87e8dSBarry Smith Synopsis: 1005aaa7dc30SBarry Smith #include <petscsys.h> 1006eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1007eca87e8dSBarry Smith 1008eca87e8dSBarry Smith Not Collective 1009eca87e8dSBarry Smith 1010e28ce29aSPatrick Sanan Input Parameters: 1011d382aafbSBarry Smith + memory1 - memory to free 1012d382aafbSBarry Smith . memory2 - 2nd memory to free 1013d382aafbSBarry Smith - memory3 - 3rd memory to free 1014d382aafbSBarry Smith 1015d382aafbSBarry Smith Level: developer 1016d382aafbSBarry Smith 101795452b02SPatrick Sanan Notes: 101895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1019d382aafbSBarry Smith 1020d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1021d382aafbSBarry Smith 1022d382aafbSBarry Smith M*/ 1023ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1024d382aafbSBarry Smith 1025d382aafbSBarry Smith /*MC 1026d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1027d382aafbSBarry Smith 1028eca87e8dSBarry Smith Synopsis: 1029aaa7dc30SBarry Smith #include <petscsys.h> 1030eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1031eca87e8dSBarry Smith 1032eca87e8dSBarry Smith Not Collective 1033eca87e8dSBarry Smith 1034e28ce29aSPatrick Sanan Input Parameters: 1035d382aafbSBarry Smith + m1 - memory to free 1036d382aafbSBarry Smith . m2 - 2nd memory to free 1037d382aafbSBarry Smith . m3 - 3rd memory to free 1038d382aafbSBarry Smith - m4 - 4th memory to free 1039d382aafbSBarry Smith 1040d382aafbSBarry Smith Level: developer 1041d382aafbSBarry Smith 104295452b02SPatrick Sanan Notes: 104395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1044d382aafbSBarry Smith 1045d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1046d382aafbSBarry Smith 1047d382aafbSBarry Smith M*/ 1048ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1049d382aafbSBarry Smith 1050d382aafbSBarry Smith /*MC 1051d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1052d382aafbSBarry Smith 1053eca87e8dSBarry Smith Synopsis: 1054aaa7dc30SBarry Smith #include <petscsys.h> 1055eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1056eca87e8dSBarry Smith 1057eca87e8dSBarry Smith Not Collective 1058eca87e8dSBarry Smith 1059e28ce29aSPatrick Sanan Input Parameters: 1060d382aafbSBarry Smith + m1 - memory to free 1061d382aafbSBarry Smith . m2 - 2nd memory to free 1062d382aafbSBarry Smith . m3 - 3rd memory to free 1063d382aafbSBarry Smith . m4 - 4th memory to free 1064d382aafbSBarry Smith - m5 - 5th memory to free 1065d382aafbSBarry Smith 1066d382aafbSBarry Smith Level: developer 1067d382aafbSBarry Smith 106895452b02SPatrick Sanan Notes: 106995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1070d382aafbSBarry Smith 1071d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1072d382aafbSBarry Smith 1073d382aafbSBarry Smith M*/ 1074ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1075d382aafbSBarry Smith 1076d382aafbSBarry Smith /*MC 1077d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1078d382aafbSBarry Smith 1079eca87e8dSBarry Smith Synopsis: 1080aaa7dc30SBarry Smith #include <petscsys.h> 1081eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1082eca87e8dSBarry Smith 1083eca87e8dSBarry Smith Not Collective 1084eca87e8dSBarry Smith 1085e28ce29aSPatrick Sanan Input Parameters: 1086d382aafbSBarry Smith + m1 - memory to free 1087d382aafbSBarry Smith . m2 - 2nd memory to free 1088d382aafbSBarry Smith . m3 - 3rd memory to free 1089d382aafbSBarry Smith . m4 - 4th memory to free 1090d382aafbSBarry Smith . m5 - 5th memory to free 1091d382aafbSBarry Smith - m6 - 6th memory to free 1092d382aafbSBarry Smith 1093d382aafbSBarry Smith 1094d382aafbSBarry Smith Level: developer 1095d382aafbSBarry Smith 109695452b02SPatrick Sanan Notes: 109795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1098d382aafbSBarry Smith 1099d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1100d382aafbSBarry Smith 1101d382aafbSBarry Smith M*/ 1102ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1103d382aafbSBarry Smith 1104d382aafbSBarry Smith /*MC 1105d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1106d382aafbSBarry Smith 1107eca87e8dSBarry Smith Synopsis: 1108aaa7dc30SBarry Smith #include <petscsys.h> 1109eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1110eca87e8dSBarry Smith 1111eca87e8dSBarry Smith Not Collective 1112eca87e8dSBarry Smith 1113e28ce29aSPatrick Sanan Input Parameters: 1114d382aafbSBarry Smith + m1 - memory to free 1115d382aafbSBarry Smith . m2 - 2nd memory to free 1116d382aafbSBarry Smith . m3 - 3rd memory to free 1117d382aafbSBarry Smith . m4 - 4th memory to free 1118d382aafbSBarry Smith . m5 - 5th memory to free 1119d382aafbSBarry Smith . m6 - 6th memory to free 1120d382aafbSBarry Smith - m7 - 7th memory to free 1121d382aafbSBarry Smith 1122d382aafbSBarry Smith 1123d382aafbSBarry Smith Level: developer 1124d382aafbSBarry Smith 112595452b02SPatrick Sanan Notes: 112695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1127d382aafbSBarry Smith 1128d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1129d382aafbSBarry Smith PetscMalloc7() 1130d382aafbSBarry Smith 1131d382aafbSBarry Smith M*/ 1132ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1133d382aafbSBarry Smith 1134ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1135ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1136071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1137efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 11383221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1139ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 114092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1142d382aafbSBarry Smith 1143d382aafbSBarry Smith /* 1144c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1145c1706be6SHong Zhang */ 1146c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1147c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 1148*31f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 1149*31f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 1150*31f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 1151*31f06eaaSHong Zhang #endif 1152c1706be6SHong Zhang 1153a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 115436763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1155a5057860SBarry Smith 1156a5057860SBarry Smith /* 115766d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1158d382aafbSBarry Smith */ 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 116092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1163e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1164e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 116592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 116692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1167efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 116892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 116992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1170d382aafbSBarry Smith 11716a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1172014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1174014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 11758e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1176d382aafbSBarry Smith 1177d382aafbSBarry Smith /* 1178d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1179d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1180d382aafbSBarry Smith functionality and/or error checking. 1181d382aafbSBarry Smith */ 1182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1184014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1185d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1188014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1190014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1191014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1193a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1194014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1195014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1196014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11972f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1198014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1199014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1200014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1201014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 12022c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1203014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1204014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 120547340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 12066fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 12076991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 12086991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1209014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1210d382aafbSBarry Smith 1211573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1212573b0fb4SBarry Smith 1213014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1214014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1215014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 12168e81d068SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1217d382aafbSBarry Smith 1218a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1219a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1220a53986e1SJed Brown 1221d382aafbSBarry Smith /* 1222d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1223d382aafbSBarry Smith */ 1224367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1225570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1226014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 12272414b3c7SJed Brown #else 12282414b3c7SJed Brown #define MPIU_SUM MPI_SUM 12292414b3c7SJed Brown #endif 1230570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1231014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1232014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1233d9822059SBarry Smith #else 1234d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1235d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1236d9822059SBarry Smith #endif 1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1238d382aafbSBarry Smith 1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1241eb3f98d2SBarry Smith 124295c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1243d6a4318aSJed Brown 1244639ff905SBarry Smith /* 1245639ff905SBarry Smith Defines PETSc error handling. 1246639ff905SBarry Smith */ 1247639ff905SBarry Smith #include <petscerror.h> 1248d382aafbSBarry Smith 12490700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1250014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1251014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 125381256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 125481256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 125581256985SMatthew G. Knepley 1256d382aafbSBarry Smith 1257d382aafbSBarry Smith /* 1258d382aafbSBarry Smith Routines that get memory usage information from the OS 1259d382aafbSBarry Smith */ 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1263b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1264d382aafbSBarry Smith 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1267d382aafbSBarry Smith 1268d382aafbSBarry Smith /* 1269d382aafbSBarry Smith Initialization of PETSc 1270d382aafbSBarry Smith */ 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1281d382aafbSBarry Smith 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1283607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1284d382aafbSBarry Smith 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1289d382aafbSBarry Smith 1290a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1291a50e088cSMatthew G. Knepley 1292a50e088cSMatthew G. Knepley 1293d382aafbSBarry Smith /* 1294d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12952981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1296d382aafbSBarry Smith */ 1297638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1298638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1299638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1300d382aafbSBarry Smith 1301d382aafbSBarry Smith /* 1302d382aafbSBarry Smith Functions that can act on any PETSc object. 1303d382aafbSBarry Smith */ 1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1322bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1323bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 13260eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 13270eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1329d382aafbSBarry Smith 1330665c2dedSJed Brown #include <petscviewertypes.h> 1331639ff905SBarry Smith #include <petscoptions.h> 1332639ff905SBarry Smith 13330633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 13340633abcbSJed Brown 1335639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1336c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1337dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1338639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 13390005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 13400005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1348685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 13514099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1353b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1356d382aafbSBarry Smith 1357e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13587aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1359e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1360e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1361e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1362e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1363e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1364e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1365e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1366e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1367e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 136815681b3cSBarry Smith 1369ec7429eaSBarry Smith #else 13707aab2a10SBarry Smith #define PetscSAWsBlock() 0 1371e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1372e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1373e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1374e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1375e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1376e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1377e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1378e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1379e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 138015681b3cSBarry Smith 1381ec7429eaSBarry Smith #endif 1382b90c6cbeSBarry Smith 138382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 138482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 138582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 13867d5d4d99SBarry Smith 13875fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1388a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 13895fe58b6fSBarry Smith #endif 13907eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1391a64a8e02SBarry Smith 1392140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1393140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1394140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1395140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1396140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1397140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1398d382aafbSBarry Smith 1399d382aafbSBarry Smith /* 1400503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1401d382aafbSBarry Smith link libraries that will be loaded as needed. 1402d382aafbSBarry Smith */ 1403a240a19fSJed Brown 1404a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1405a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1406140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 14071c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 14081c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 140944ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1410140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1411140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1412140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1413d382aafbSBarry Smith 1414014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1422d382aafbSBarry Smith 1423d382aafbSBarry Smith /* 1424d382aafbSBarry Smith Useful utility routines 1425d382aafbSBarry Smith */ 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 14326ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 14336ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1434d382aafbSBarry Smith 143564ac3b0dSPatrick Sanan /*MC 1436ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1437503cfb0cSBarry Smith 1438e28ce29aSPatrick Sanan Notes: 1439e28ce29aSPatrick Sanan This is useful in cases like 1440503cfb0cSBarry Smith $ int *a; 1441ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 14421cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 144364ac3b0dSPatrick Sanan 144464ac3b0dSPatrick Sanan Level: beginner 144564ac3b0dSPatrick Sanan 144664ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 144764ac3b0dSPatrick Sanan M*/ 1448d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1449503cfb0cSBarry Smith 1450d382aafbSBarry Smith /*MC 1451d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1452d382aafbSBarry Smith 1453d382aafbSBarry Smith Synopsis: 1454aaa7dc30SBarry Smith #include <petscsys.h> 1455d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1456d382aafbSBarry Smith 1457eca87e8dSBarry Smith Not Collective 1458eca87e8dSBarry Smith 1459d382aafbSBarry Smith Input Parameters: 1460d382aafbSBarry Smith . format - the usual printf() format string 1461d382aafbSBarry Smith 1462d382aafbSBarry Smith Level: developer 1463d382aafbSBarry Smith 1464d382aafbSBarry Smith Fortran Note: 1465d382aafbSBarry Smith This routine is not supported in Fortran. 1466d382aafbSBarry Smith 1467d382aafbSBarry Smith 1468d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1469d382aafbSBarry Smith M*/ 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1471d382aafbSBarry Smith 1472fcfd50ebSBarry Smith /* 1473fcfd50ebSBarry Smith Defines PETSc profiling. 1474fcfd50ebSBarry Smith */ 14752c8e378dSBarry Smith #include <petsclog.h> 1476fcfd50ebSBarry Smith 1477fcfd50ebSBarry Smith /* 1478fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1479fcfd50ebSBarry Smith */ 1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 14871b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1488fcfd50ebSBarry Smith 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1492d382aafbSBarry Smith 1493d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1494d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1495d781fa04SBarry Smith 1496d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1498016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 149974ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1500d382aafbSBarry Smith #endif 1501d382aafbSBarry Smith 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 15040ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1509d382aafbSBarry Smith 1510014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1516b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1517d382aafbSBarry Smith 1518d382aafbSBarry Smith /* 1519d382aafbSBarry Smith For use in debuggers 1520d382aafbSBarry Smith */ 1521014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1522014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1526d382aafbSBarry Smith 1527a663daf8SBarry Smith #include <stddef.h> 1528a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1529d382aafbSBarry Smith #include <stdlib.h> 15306c7e564aSBarry Smith 15314a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1532d382aafbSBarry Smith #include <xmmintrin.h> 1533d382aafbSBarry Smith #endif 1534d382aafbSBarry Smith 1535d382aafbSBarry Smith /*@C 1536580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1537580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1538580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1539580bdb30SBarry Smith 1540580bdb30SBarry Smith Not Collective 1541580bdb30SBarry Smith 1542580bdb30SBarry Smith Input Parameters: 1543580bdb30SBarry Smith + b - pointer to initial memory space 1544580bdb30SBarry Smith . a - pointer to copy space 1545580bdb30SBarry Smith - n - length (in bytes) of space to copy 1546580bdb30SBarry Smith 1547580bdb30SBarry Smith Level: intermediate 1548580bdb30SBarry Smith 1549580bdb30SBarry Smith Note: 1550857a15f1SBarry Smith PetscArraymove() is preferred 1551580bdb30SBarry Smith This routine is analogous to memmove(). 1552580bdb30SBarry Smith 1553580bdb30SBarry Smith Developers Note: This is inlined for performance 1554580bdb30SBarry Smith 1555580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1556580bdb30SBarry Smith PetscArraymove() 1557580bdb30SBarry Smith @*/ 1558580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1559580bdb30SBarry Smith { 1560580bdb30SBarry Smith PetscFunctionBegin; 1561580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1562580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1563580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1564580bdb30SBarry Smith if (a < b) { 1565580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1566580bdb30SBarry Smith else { 1567580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1568580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1569580bdb30SBarry Smith } 1570580bdb30SBarry Smith } else { 1571580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1572580bdb30SBarry Smith else { 1573580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1574580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1575580bdb30SBarry Smith } 1576580bdb30SBarry Smith } 1577580bdb30SBarry Smith #else 1578580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1579580bdb30SBarry Smith #endif 1580580bdb30SBarry Smith PetscFunctionReturn(0); 1581580bdb30SBarry Smith } 1582580bdb30SBarry Smith 1583d382aafbSBarry Smith /*@C 1584d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1585d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1586d382aafbSBarry Smith PetscMemmove() in that case. 1587d382aafbSBarry Smith 1588d382aafbSBarry Smith Not Collective 1589d382aafbSBarry Smith 1590d382aafbSBarry Smith Input Parameters: 1591d382aafbSBarry Smith + b - pointer to initial memory space 1592d382aafbSBarry Smith - n - length (in bytes) of space to copy 1593d382aafbSBarry Smith 1594d382aafbSBarry Smith Output Parameter: 1595d382aafbSBarry Smith . a - pointer to copy space 1596d382aafbSBarry Smith 1597d382aafbSBarry Smith Level: intermediate 1598d382aafbSBarry Smith 1599d382aafbSBarry Smith Compile Option: 1600d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1601d382aafbSBarry Smith for memory copies on double precision values. 1602d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1603d382aafbSBarry Smith for memory copies on double precision values. 1604d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1605d382aafbSBarry Smith for memory copies on double precision values. 1606d382aafbSBarry Smith 1607d382aafbSBarry Smith Note: 1608580bdb30SBarry Smith Prefer PetscArraycpy() 1609d382aafbSBarry Smith This routine is analogous to memcpy(). 16101fd49c25SBarry Smith Not available from Fortran 16111fd49c25SBarry Smith 1612f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1613f5f57ec0SBarry Smith 1614580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1615d382aafbSBarry Smith 1616d382aafbSBarry Smith @*/ 16177087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1618d382aafbSBarry Smith { 1619d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1620c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1621c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1622a7e36092SMatthew G Knepley PetscFunctionBegin; 1623e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1624e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1625a7e36092SMatthew G Knepley #else 1626d382aafbSBarry Smith PetscFunctionBegin; 1627a7e36092SMatthew G Knepley #endif 1628a47a537aSLisandro Dalcin if (a != b && n > 0) { 1629d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1630e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1631d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1632d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1633d382aafbSBarry Smith #endif 1634d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1635c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1636d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1637d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1638c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1639c5df96a5SBarry Smith PetscErrorCode ierr; 1640c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 16418b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1642d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1643d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1644d382aafbSBarry Smith #else 1645d382aafbSBarry Smith size_t i; 1646d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1647d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1648d382aafbSBarry Smith #endif 1649d382aafbSBarry Smith } else { 1650d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1651d382aafbSBarry Smith } 1652d382aafbSBarry Smith #else 1653d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1654d382aafbSBarry Smith #endif 1655d382aafbSBarry Smith } 1656d382aafbSBarry Smith PetscFunctionReturn(0); 1657d382aafbSBarry Smith } 1658d382aafbSBarry Smith 1659d382aafbSBarry Smith /*@C 1660d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1661d382aafbSBarry Smith 1662d382aafbSBarry Smith Not Collective 1663d382aafbSBarry Smith 1664d382aafbSBarry Smith Input Parameters: 1665d382aafbSBarry Smith + a - pointer to beginning memory location 1666d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1667d382aafbSBarry Smith 1668d382aafbSBarry Smith Level: intermediate 1669d382aafbSBarry Smith 1670d382aafbSBarry Smith Compile Option: 1671d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1672d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1673d382aafbSBarry Smith 16741fd49c25SBarry Smith Not available from Fortran 1675857a15f1SBarry Smith Prefer PetscArrayzero() 16761fd49c25SBarry Smith 1677503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1678503cfb0cSBarry Smith 1679580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1680d382aafbSBarry Smith @*/ 16817087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1682d382aafbSBarry Smith { 1683d382aafbSBarry Smith if (n > 0) { 1684d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1685e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1686d382aafbSBarry Smith #endif 1687d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1688d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1689d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1690d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1691d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1692d382aafbSBarry Smith } else { 1693d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1694d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1695d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1696d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1697d382aafbSBarry Smith } else { 1698d382aafbSBarry Smith #endif 1699d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1700d382aafbSBarry Smith bzero((char *)a,n); 1701d382aafbSBarry Smith #else 1702d382aafbSBarry Smith memset((char*)a,0,n); 1703d382aafbSBarry Smith #endif 1704d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1705d382aafbSBarry Smith } 1706d382aafbSBarry Smith #endif 1707d382aafbSBarry Smith } 1708d382aafbSBarry Smith return 0; 1709d382aafbSBarry Smith } 1710d382aafbSBarry Smith 1711d382aafbSBarry Smith /*MC 1712580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1713580bdb30SBarry Smith 1714580bdb30SBarry Smith Synopsis: 1715580bdb30SBarry Smith #include <petscsys.h> 1716580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1717580bdb30SBarry Smith 1718580bdb30SBarry Smith Not Collective 1719580bdb30SBarry Smith 1720580bdb30SBarry Smith Input Parameters: 1721580bdb30SBarry Smith + str1 - First array 1722580bdb30SBarry Smith . str2 - Second array 1723580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1724580bdb30SBarry Smith 1725580bdb30SBarry Smith Output Parameters: 1726580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1727580bdb30SBarry Smith 1728580bdb30SBarry Smith Level: intermediate 1729580bdb30SBarry Smith 1730580bdb30SBarry Smith Note: 1731857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1732580bdb30SBarry Smith The arrays must be of the same type 1733580bdb30SBarry Smith 1734580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1735580bdb30SBarry Smith PetscArraymove() 1736580bdb30SBarry Smith M*/ 17379e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1738580bdb30SBarry Smith 17398f8f2f0dSBarry Smith /*MC 1740580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1741580bdb30SBarry Smith do not overlap 1742580bdb30SBarry Smith 1743580bdb30SBarry Smith Synopsis: 1744580bdb30SBarry Smith #include <petscsys.h> 1745580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1746580bdb30SBarry Smith 1747580bdb30SBarry Smith Not Collective 1748580bdb30SBarry Smith 1749580bdb30SBarry Smith Input Parameters: 1750580bdb30SBarry Smith + str1 - First array 1751580bdb30SBarry Smith . str2 - Second array 1752580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1753580bdb30SBarry Smith 1754580bdb30SBarry Smith Level: intermediate 1755580bdb30SBarry Smith 1756580bdb30SBarry Smith Note: 1757857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1758580bdb30SBarry Smith The arrays must be of the same type 1759580bdb30SBarry Smith 1760580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1761580bdb30SBarry Smith M*/ 17629e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1763580bdb30SBarry Smith 17648f8f2f0dSBarry Smith /*MC 1765580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1766580bdb30SBarry Smith 1767580bdb30SBarry Smith Synopsis: 1768580bdb30SBarry Smith #include <petscsys.h> 1769580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1770580bdb30SBarry Smith 1771580bdb30SBarry Smith Not Collective 1772580bdb30SBarry Smith 1773580bdb30SBarry Smith Input Parameters: 1774de25709eSStefano Zampini + str1 - First array (destination) 1775de25709eSStefano Zampini . str2 - Second array (source) 1776580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1777580bdb30SBarry Smith 1778580bdb30SBarry Smith Level: intermediate 1779580bdb30SBarry Smith 1780580bdb30SBarry Smith Note: 1781857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1782580bdb30SBarry Smith The arrays must be of the same type 1783580bdb30SBarry Smith 1784580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1785580bdb30SBarry Smith M*/ 17869e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1787580bdb30SBarry Smith 17888f8f2f0dSBarry Smith /*MC 1789580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1790580bdb30SBarry Smith 1791580bdb30SBarry Smith Synopsis: 1792580bdb30SBarry Smith #include <petscsys.h> 1793580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1794580bdb30SBarry Smith 1795580bdb30SBarry Smith Not Collective 1796580bdb30SBarry Smith 1797580bdb30SBarry Smith Input Parameters: 1798580bdb30SBarry Smith + str1 - array 1799580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1800580bdb30SBarry Smith 1801580bdb30SBarry Smith Level: intermediate 1802580bdb30SBarry Smith 1803580bdb30SBarry Smith Note: 1804857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1805580bdb30SBarry Smith 1806580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1807580bdb30SBarry Smith M*/ 18089e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1809580bdb30SBarry Smith 1810d382aafbSBarry Smith /*MC 1811d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1812d382aafbSBarry Smith 1813eca87e8dSBarry Smith Synopsis: 1814aaa7dc30SBarry Smith #include <petscsys.h> 1815eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1816eca87e8dSBarry Smith 1817d382aafbSBarry Smith Not Collective 1818d382aafbSBarry Smith 1819d382aafbSBarry Smith Input Parameters: 1820d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1821d382aafbSBarry Smith . n - number of elements to fetch 1822d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 182350d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1824d382aafbSBarry Smith 1825d382aafbSBarry Smith Level: developer 1826d382aafbSBarry Smith 1827d382aafbSBarry Smith Notes: 1828d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1829d382aafbSBarry Smith 183050d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 183150d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 183250d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 183363cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 183463cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 183563cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1836d382aafbSBarry Smith 1837d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1838d382aafbSBarry Smith address). 1839d382aafbSBarry Smith 1840d382aafbSBarry Smith M*/ 1841d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1842d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1843d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1844d382aafbSBarry Smith } while (0) 1845d382aafbSBarry Smith 1846d382aafbSBarry Smith /* 1847d382aafbSBarry Smith Determine if some of the kernel computation routines use 1848d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1849d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1850d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1851e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1852d382aafbSBarry Smith */ 1853d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1854d382aafbSBarry Smith 1855d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1856d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1857d382aafbSBarry Smith #endif 1858d382aafbSBarry Smith 18595a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18605a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1861d382aafbSBarry Smith #endif 1862d382aafbSBarry Smith 1863d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1864d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1865d382aafbSBarry Smith #endif 1866d382aafbSBarry Smith 1867d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1868d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1869d382aafbSBarry Smith #endif 1870d382aafbSBarry Smith 1871d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1872d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1873d382aafbSBarry Smith #endif 1874d382aafbSBarry Smith 1875d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1876d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1877d382aafbSBarry Smith #endif 1878d382aafbSBarry Smith 1879d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1880d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1881d382aafbSBarry Smith #endif 1882d382aafbSBarry Smith 1883d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1884d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1885d382aafbSBarry Smith #endif 1886d382aafbSBarry Smith 1887d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1888d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1889d382aafbSBarry Smith #endif 1890d382aafbSBarry Smith 1891d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1892d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1893d382aafbSBarry Smith #endif 1894d382aafbSBarry Smith 1895d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1896d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1897d382aafbSBarry Smith #endif 1898d382aafbSBarry Smith 1899d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1900d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1901d382aafbSBarry Smith #endif 1902d382aafbSBarry Smith 1903d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1904d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1905d382aafbSBarry Smith #endif 1906d382aafbSBarry Smith 1907d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1908d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1909d382aafbSBarry Smith #endif 1910d382aafbSBarry Smith 1911d382aafbSBarry Smith #endif 1912d382aafbSBarry Smith 1913d382aafbSBarry Smith /* 1914d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1915d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1916d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1917d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1918d382aafbSBarry Smith ugly extern "C" {} wrappers. 1919d382aafbSBarry Smith */ 1920d382aafbSBarry Smith #if defined(__cplusplus) 1921d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 1922d382aafbSBarry Smith # define EXTERN_C_END } 1923d382aafbSBarry Smith #else 1924d382aafbSBarry Smith # define EXTERN_C_BEGIN 1925d382aafbSBarry Smith # define EXTERN_C_END 1926d382aafbSBarry Smith #endif 1927d382aafbSBarry Smith 1928d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1929d382aafbSBarry Smith 1930d382aafbSBarry Smith /*MC 1931d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1932d382aafbSBarry Smith communication 1933d382aafbSBarry Smith 1934d382aafbSBarry Smith Level: beginner 1935d382aafbSBarry Smith 1936d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1937d382aafbSBarry Smith 1938d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1939d382aafbSBarry Smith M*/ 1940d382aafbSBarry Smith 1941d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1942014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1943014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1944c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1945c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1946c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1947c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1948d382aafbSBarry Smith #endif 1949d382aafbSBarry Smith 1950d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1951d382aafbSBarry Smith 1952d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1953d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1954d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1955d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1956d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1957d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1958d382aafbSBarry Smith 195961b0d812SBarry Smith /*@C 1960c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 1961c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 1962c73702f5SBarry Smith 1963c73702f5SBarry Smith Not Collective 1964c73702f5SBarry Smith 1965c73702f5SBarry Smith Input Parameter: 1966c73702f5SBarry Smith . a - the PetscInt64 value 1967c73702f5SBarry Smith 1968c73702f5SBarry Smith Output Parameter: 1969c73702f5SBarry Smith . b - the resulting PetscInt value 1970c73702f5SBarry Smith 1971c73702f5SBarry Smith Level: advanced 1972c73702f5SBarry Smith 1973c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1974c73702f5SBarry Smith 1975c73702f5SBarry Smith Not available from Fortran 1976c73702f5SBarry Smith 1977c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast() 1978c73702f5SBarry Smith @*/ 1979c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 1980c73702f5SBarry Smith { 1981c73702f5SBarry Smith PetscFunctionBegin; 1982c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 1983c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 1984c73702f5SBarry Smith #endif 1985c73702f5SBarry Smith *b = (PetscInt)(a); 1986c73702f5SBarry Smith PetscFunctionReturn(0); 1987c73702f5SBarry Smith } 1988c73702f5SBarry Smith 1989c73702f5SBarry Smith /*@C 199061b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 199161b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 199261b0d812SBarry Smith 199361b0d812SBarry Smith Not Collective 199461b0d812SBarry Smith 199561b0d812SBarry Smith Input Parameter: 199661b0d812SBarry Smith . a - the PetscInt value 199761b0d812SBarry Smith 199861b0d812SBarry Smith Output Parameter: 199961b0d812SBarry Smith . b - the resulting PetscBLASInt value 200061b0d812SBarry Smith 200161b0d812SBarry Smith Level: advanced 200261b0d812SBarry Smith 20031fd49c25SBarry Smith Not available from Fortran 20041fd49c25SBarry Smith 2005c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 200661b0d812SBarry Smith @*/ 2007c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2008c5df96a5SBarry Smith { 2009c5df96a5SBarry Smith PetscFunctionBegin; 2010c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 201173f49a0bSSatish Balay *b = 0; 2012c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2013c5df96a5SBarry Smith #endif 2014c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2015c5df96a5SBarry Smith PetscFunctionReturn(0); 2016c5df96a5SBarry Smith } 2017c5df96a5SBarry Smith 201861b0d812SBarry Smith /*@C 201961b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 202061b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 202161b0d812SBarry Smith 202261b0d812SBarry Smith Not Collective 202361b0d812SBarry Smith 202461b0d812SBarry Smith Input Parameter: 202561b0d812SBarry Smith . a - the PetscInt value 202661b0d812SBarry Smith 202761b0d812SBarry Smith Output Parameter: 202861b0d812SBarry Smith . b - the resulting PetscMPIInt value 202961b0d812SBarry Smith 203061b0d812SBarry Smith Level: advanced 203161b0d812SBarry Smith 20321fd49c25SBarry Smith Not available from Fortran 20331fd49c25SBarry Smith 2034c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 203561b0d812SBarry Smith @*/ 20364dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 20374dc2109aSBarry Smith { 20384dc2109aSBarry Smith PetscFunctionBegin; 20394dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 204073f49a0bSSatish Balay *b = 0; 20414dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 20424dc2109aSBarry Smith #endif 2043c73702f5SBarry Smith *b = (PetscMPIInt)(a); 20444dc2109aSBarry Smith PetscFunctionReturn(0); 20454dc2109aSBarry Smith } 20464dc2109aSBarry Smith 2047bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 20482f18eb33SBarry Smith 20492f18eb33SBarry Smith /*@C 20502f18eb33SBarry Smith 20512f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 20522f18eb33SBarry Smith 20532f18eb33SBarry Smith Not Collective 20542f18eb33SBarry Smith 20552f18eb33SBarry Smith Input Parameter: 20562f18eb33SBarry Smith + a - the PetscReal value 20572f18eb33SBarry Smith - b - the second value 20582f18eb33SBarry Smith 2059390e1bf2SBarry Smith Returns: 2060390e1bf2SBarry Smith the result as a PetscInt value 20612f18eb33SBarry Smith 2062bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 20632f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 20642f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 20652f18eb33SBarry Smith 2066e28ce29aSPatrick Sanan Developers Note: 2067e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 20682f18eb33SBarry Smith 20692f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 20702f18eb33SBarry Smith 20711fd49c25SBarry Smith Not available from Fortran 20721fd49c25SBarry Smith 20732f18eb33SBarry Smith Level: advanced 20742f18eb33SBarry Smith 2075390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 20762f18eb33SBarry Smith @*/ 20772f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 20782f18eb33SBarry Smith { 2079bafee8b4SSatish Balay PetscInt64 r; 20802f18eb33SBarry Smith 2081bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 20822f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 20832f18eb33SBarry Smith return (PetscInt) r; 20842f18eb33SBarry Smith } 20852f18eb33SBarry Smith 20862f18eb33SBarry Smith /*@C 20872f18eb33SBarry Smith 20882f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 20892f18eb33SBarry Smith 20902f18eb33SBarry Smith Not Collective 20912f18eb33SBarry Smith 20922f18eb33SBarry Smith Input Parameter: 20932f18eb33SBarry Smith + a - the PetscInt value 20942f18eb33SBarry Smith - b - the second value 20952f18eb33SBarry Smith 2096390e1bf2SBarry Smith Returns: 2097390e1bf2SBarry Smith the result as a PetscInt value 20982f18eb33SBarry Smith 2099bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21002f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 21012f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21022f18eb33SBarry Smith 21031fd49c25SBarry Smith Not available from Fortran 21041fd49c25SBarry Smith 21052f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21062f18eb33SBarry Smith 21072f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21082f18eb33SBarry Smith 21092f18eb33SBarry Smith Level: advanced 21102f18eb33SBarry Smith 2111390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 21122f18eb33SBarry Smith @*/ 21132f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 21142f18eb33SBarry Smith { 2115bafee8b4SSatish Balay PetscInt64 r; 21162f18eb33SBarry Smith 2117bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 21182f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21192f18eb33SBarry Smith return (PetscInt) r; 21202f18eb33SBarry Smith } 21212f18eb33SBarry Smith 2122f91af8c7SBarry Smith /*@C 2123f91af8c7SBarry Smith 2124f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2125f91af8c7SBarry Smith 2126f91af8c7SBarry Smith Not Collective 2127f91af8c7SBarry Smith 2128f91af8c7SBarry Smith Input Parameter: 2129f91af8c7SBarry Smith + a - the PetscInt value 2130f91af8c7SBarry Smith - b - the second value 2131f91af8c7SBarry Smith 2132390e1bf2SBarry Smith Returns: 2133390e1bf2SBarry Smith the result as a PetscInt value 2134f91af8c7SBarry Smith 2135bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2136f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2137f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2138f91af8c7SBarry Smith 2139f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2140f91af8c7SBarry Smith 2141f5f57ec0SBarry Smith Not available from Fortran 2142f5f57ec0SBarry Smith 2143f91af8c7SBarry Smith Level: advanced 2144f91af8c7SBarry Smith 2145390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2146f91af8c7SBarry Smith @*/ 2147f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2148f91af8c7SBarry Smith { 2149bafee8b4SSatish Balay PetscInt64 r; 2150f91af8c7SBarry Smith 2151bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2152f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2153f91af8c7SBarry Smith return (PetscInt) r; 2154f91af8c7SBarry Smith } 2155f91af8c7SBarry Smith 21562f18eb33SBarry Smith /*@C 21572f18eb33SBarry Smith 21582f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 21592f18eb33SBarry Smith 21602f18eb33SBarry Smith Not Collective 21612f18eb33SBarry Smith 21622f18eb33SBarry Smith Input Parameter: 21632f18eb33SBarry Smith + a - the PetscInt value 21642f18eb33SBarry Smith - b - the second value 21652f18eb33SBarry Smith 21662f18eb33SBarry Smith Output Parameter:ma 2167390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 21682f18eb33SBarry Smith 2169bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 21702f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 21712f18eb33SBarry Smith 2172f5f57ec0SBarry Smith Not available from Fortran 2173f5f57ec0SBarry Smith 2174220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 21752f18eb33SBarry Smith 21762f18eb33SBarry Smith Level: advanced 21772f18eb33SBarry Smith 2178220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 21792f18eb33SBarry Smith @*/ 21802f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 21812f18eb33SBarry Smith { 2182bafee8b4SSatish Balay PetscInt64 r; 21832f18eb33SBarry Smith 21842f18eb33SBarry Smith PetscFunctionBegin; 2185bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 21862f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 21872f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 21882f18eb33SBarry Smith #endif 2189f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2190f91af8c7SBarry Smith PetscFunctionReturn(0); 2191f91af8c7SBarry Smith } 2192f91af8c7SBarry Smith 2193f91af8c7SBarry Smith /*@C 2194f91af8c7SBarry Smith 2195fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2196f91af8c7SBarry Smith 2197f91af8c7SBarry Smith Not Collective 2198f91af8c7SBarry Smith 2199f91af8c7SBarry Smith Input Parameter: 2200f91af8c7SBarry Smith + a - the PetscInt value 2201f91af8c7SBarry Smith - b - the second value 2202f91af8c7SBarry Smith 2203f91af8c7SBarry Smith Output Parameter:ma 2204390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2205f91af8c7SBarry Smith 2206bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2207f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2208f91af8c7SBarry Smith 2209f5f57ec0SBarry Smith Not available from Fortran 2210f5f57ec0SBarry Smith 2211f91af8c7SBarry Smith Level: advanced 2212f91af8c7SBarry Smith 2213390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2214f91af8c7SBarry Smith @*/ 2215f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2216f91af8c7SBarry Smith { 2217bafee8b4SSatish Balay PetscInt64 r; 2218f91af8c7SBarry Smith 2219f91af8c7SBarry Smith PetscFunctionBegin; 2220bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2221f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2222f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2223f91af8c7SBarry Smith #endif 2224f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 22252f18eb33SBarry Smith PetscFunctionReturn(0); 22262f18eb33SBarry Smith } 2227c5df96a5SBarry Smith 2228d382aafbSBarry Smith /* 22292981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2230d382aafbSBarry Smith */ 2231d382aafbSBarry Smith #if defined(hz) 2232d382aafbSBarry Smith # undef hz 2233d382aafbSBarry Smith #endif 2234d382aafbSBarry Smith 223515a5570dSLisandro Dalcin #include <limits.h> 223615a5570dSLisandro Dalcin 223715a5570dSLisandro Dalcin /* The number of bits in a byte */ 223815a5570dSLisandro Dalcin 223915a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 224015a5570dSLisandro Dalcin 2241d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2242d382aafbSBarry Smith 2243d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2244d382aafbSBarry Smith # include <sys/param.h> 2245d382aafbSBarry Smith #endif 2246d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2247d382aafbSBarry Smith # include <sys/types.h> 2248d382aafbSBarry Smith #endif 2249d382aafbSBarry Smith #if defined(MAXPATHLEN) 2250d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2251d382aafbSBarry Smith #elif defined(MAX_PATH) 2252d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2253d382aafbSBarry Smith #elif defined(_MAX_PATH) 2254d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2255d382aafbSBarry Smith #else 2256d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2257d382aafbSBarry Smith #endif 2258d382aafbSBarry Smith 2259d382aafbSBarry Smith /*MC 2260d382aafbSBarry Smith 226166d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 226266d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 226366d79e26SBarry Smith 226466d79e26SBarry Smith 226566d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 226666d79e26SBarry Smith 226766d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 226866d79e26SBarry Smith 226966d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 227066d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 227166d79e26SBarry Smith 227266d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 227366d79e26SBarry Smith 227466d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 227566d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 227666d79e26SBarry Smith version number (x.y.z). 227766d79e26SBarry Smith 227866d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 227966d79e26SBarry Smith 228066d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 228166d79e26SBarry Smith 228266d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 228366d79e26SBarry Smith 228466d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 228566d79e26SBarry Smith 228666d79e26SBarry Smith Level: intermediate 228766d79e26SBarry Smith 228866d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 228966d79e26SBarry Smith 229066d79e26SBarry Smith M*/ 229166d79e26SBarry Smith 229266d79e26SBarry Smith /*MC 229366d79e26SBarry Smith 22941b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 22951b266c99SBarry Smith of every function and module definition you need something like 2296d382aafbSBarry Smith 2297d382aafbSBarry Smith $ 2298af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 22990f665fc7SPatrick Sanan $ use petscXXX 23001b266c99SBarry Smith 2301692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 23021b266c99SBarry Smith 2303d382aafbSBarry Smith $ XXX variablename 23041b266c99SBarry Smith $ type(tXXX) variablename 23051b266c99SBarry Smith 2306692afcd8SPatrick Sanan For example, 23071b266c99SBarry Smith 2308bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 23091b266c99SBarry Smith $ use petscvec 2310d382aafbSBarry Smith $ 2311692afcd8SPatrick Sanan $ Vec b 2312692afcd8SPatrick Sanan $ type(tVec) x 2313d382aafbSBarry Smith 2314d382aafbSBarry Smith Level: beginner 2315d382aafbSBarry Smith 2316d382aafbSBarry Smith M*/ 2317d382aafbSBarry Smith 2318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 232427710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 23255f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2326d382aafbSBarry Smith 23276a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 23286a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 23296a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2331ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 233222ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2333014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2334f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 233560e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2336d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 23406c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 234117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 234217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 23445569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 234617df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 234839f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2350745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 235139f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 23556c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 23566c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2357e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2358d382aafbSBarry Smith 2359ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2360ce605777SToby Isaac 2361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2363d382aafbSBarry Smith 236476bdecfbSBarry Smith /*J 2365d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2366d382aafbSBarry Smith 2367d382aafbSBarry Smith Level: beginner 2368d382aafbSBarry Smith 2369e28ce29aSPatrick Sanan Notes: 2370e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 237125ccb61fSToby Isaac with the option --download-sprng or --download-random123 2372d382aafbSBarry Smith 23738f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 237476bdecfbSBarry Smith J*/ 237519fd82e9SBarry Smith typedef const char* PetscRandomType; 2376d382aafbSBarry Smith #define PETSCRAND "rand" 2377d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2378d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2379c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 238025ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2381d382aafbSBarry Smith 2382d382aafbSBarry Smith /* Logging support */ 2383014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2384d382aafbSBarry Smith 2385607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2386d382aafbSBarry Smith 2387d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2388140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2389d382aafbSBarry Smith 2390bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 239119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 239319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2394fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2396d382aafbSBarry Smith 2397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2406d382aafbSBarry Smith 2407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 241497540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24158a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 241697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2417d382aafbSBarry Smith 241830815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 241930815ce0SLisandro Dalcin 24209860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 24219860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool); 24239860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool); 2424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2431c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2432e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2433c891a504SStefano Zampini #endif 2434d382aafbSBarry Smith 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2438d382aafbSBarry Smith 2439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2445d382aafbSBarry Smith 2446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2451cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2452cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2453d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2454d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2455d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2456d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 24576afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 24586afbe7ddSJed Brown MPI_Request**,MPI_Request**, 24596afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 24606afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 24616afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2462d382aafbSBarry Smith 24636145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 24646145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 24656145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 24666145cd65SJed Brown 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2468d382aafbSBarry Smith 2469ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2470ce94432eSBarry Smith 247145487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 247245487dadSJed Brown 2473d382aafbSBarry Smith struct _n_PetscSubcomm { 2474d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2475d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2476306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 247745487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 247845487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2479708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 248045487dadSJed Brown PetscSubcommType type; 2481e5acf8a4SHong Zhang char *subcommprefix; 2482d382aafbSBarry Smith }; 2483d382aafbSBarry Smith 2484c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2485306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 248636be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 249165d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2492053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2493f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2494e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2495a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2496a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2497a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2498d382aafbSBarry Smith 24999962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 25009962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 25019962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 25029962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 25039962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 25049962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25059962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 25069962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 25079962606eSBarry Smith 25085e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25095f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 25105f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25115f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25125f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 25135e71baefSBarry Smith 2514a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2515a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2516a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2517a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2518a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2519a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2520a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2521a32e93adSJunchao Zhang 252213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 25230f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 252413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2525137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2526137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2527137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 252813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 252913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 25300f453b92SJed Brown 25315e71baefSBarry Smith 2532471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2533471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2534471ecdacSJed Brown * possible. */ 25356a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2536d382aafbSBarry Smith 25379de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 25389de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 25399de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 25409de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 25419de0f6ecSBarry Smith 2542ace2fbaeSBarry Smith #include <stdarg.h> 2543ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2544ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2545ace2fbaeSBarry Smith 2546268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2547fbfcfee5SBarry Smith 25481f817a21SBarry Smith /*@C 25491f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 25501f817a21SBarry Smith 25511f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 25521f817a21SBarry Smith 25531f817a21SBarry Smith Input Parameters: 25541f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 25551f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 25561f817a21SBarry Smith 2557850545d0SSatish Balay Level: intermediate 2558850545d0SSatish Balay 2559f5f57ec0SBarry Smith Not available from Fortran 2560f5f57ec0SBarry Smith 25611f817a21SBarry Smith Options Database: 2562063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 25631f817a21SBarry Smith @*/ 2564dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2565dff31646SBarry Smith { 2566dff31646SBarry Smith size_t len; 2567dff31646SBarry Smith char *vstring; 2568dff31646SBarry Smith PetscErrorCode ierr; 2569dff31646SBarry Smith 25701f817a21SBarry Smith PetscFunctionBegin; 25718d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2572dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 257335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2574580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2575dff31646SBarry Smith if (set) *set = PETSC_TRUE; 25761f817a21SBarry Smith PetscFunctionReturn(0); 2577dff31646SBarry Smith } 2578dff31646SBarry Smith 2579b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2580fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2581fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2582f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2583fe278a28SBarry Smith 2584f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2585f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2586b967cddfSBarry Smith 25879f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 25889f4d3c52SBarry Smith 258904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2590763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2591dff31646SBarry Smith 259268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 25935dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2594d382aafbSBarry Smith 2595b2566f29SBarry Smith 2596b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2597b2566f29SBarry Smith /* 2598b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2599b2566f29SBarry Smith */ 26008f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 260177a5e07dSBarry Smith 260277a5e07dSBarry Smith /*MC 260377a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 260477a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 260577a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 260677a5e07dSBarry Smith 2607d083f849SBarry Smith Collective 260877a5e07dSBarry Smith 260977a5e07dSBarry Smith Synopsis: 261077a5e07dSBarry Smith #include <petscsys.h> 261177a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 261277a5e07dSBarry Smith 261377a5e07dSBarry Smith Input Parameters: 261477a5e07dSBarry Smith + indata - pointer to the input data to be reduced 261577a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 261677a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 261777a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 261877a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 261977a5e07dSBarry Smith 262077a5e07dSBarry Smith Output Parameter: 262177a5e07dSBarry Smith . outdata - the reduced values 262277a5e07dSBarry Smith 2623e28ce29aSPatrick Sanan Notes: 2624e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 262577a5e07dSBarry Smith 262677a5e07dSBarry Smith Level: developer 262777a5e07dSBarry Smith 262877a5e07dSBarry Smith .seealso: MPI_Allreduce() 262977a5e07dSBarry Smith M*/ 2630fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2631b2566f29SBarry Smith #else 2632b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2633b2566f29SBarry Smith #endif 2634b2566f29SBarry Smith 2635b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 26368198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 26378198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 26382f065d89SBarry Smith #endif 26398198064fSBarry Smith 264012801b39SBarry Smith /* 264112801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 264212801b39SBarry Smith */ 26438ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 26448ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 264512801b39SBarry Smith 2646d382aafbSBarry Smith #endif 2647