1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 111c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 121c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 131cc8b206SBarry Smith directory as the other PETSc include files. 14d382aafbSBarry Smith */ 152c8e378dSBarry Smith #include <petscconf.h> 161c77a0c5SBarry Smith #include <petscconf_poison.h> 172c8e378dSBarry Smith #include <petscfix.h> 18d382aafbSBarry Smith 19*33bb201bSJacob Faibussowitsch /*MC 20*33bb201bSJacob Faibussowitsch PetscHasAttribute - determine whether a particular __attribute__ is supported by the compiler 21*33bb201bSJacob Faibussowitsch 22*33bb201bSJacob Faibussowitsch Synopsis: 23*33bb201bSJacob Faibussowitsch #include <petscsys.h> 24*33bb201bSJacob Faibussowitsch boolean PetscHasAttribute(name) 25*33bb201bSJacob Faibussowitsch 26*33bb201bSJacob Faibussowitsch Input Parameter: 27*33bb201bSJacob Faibussowitsch . name - the name of the attribute to test 28*33bb201bSJacob Faibussowitsch 29*33bb201bSJacob Faibussowitsch Notes: 30*33bb201bSJacob Faibussowitsch name should be identical to what you might pass to the __attribute__ declaration itself -- 31*33bb201bSJacob Faibussowitsch plain, unbroken text. 32*33bb201bSJacob Faibussowitsch 33*33bb201bSJacob Faibussowitsch As PetscHasAttribute() is wrapper over the function-like macro __has_attribute(), the exact 34*33bb201bSJacob Faibussowitsch type and value returned is implementation defined. In practice however, it usually returns 35*33bb201bSJacob Faibussowitsch the integer literal 1 if the attribute is supported, and integer literal 0 if the attribute 36*33bb201bSJacob Faibussowitsch is not supported. 37*33bb201bSJacob Faibussowitsch 38*33bb201bSJacob Faibussowitsch Sample usage: 39*33bb201bSJacob Faibussowitsch Typical usage is usually using the preprocessor 40*33bb201bSJacob Faibussowitsch 41*33bb201bSJacob Faibussowitsch .vb 42*33bb201bSJacob Faibussowitsch #if PetscHasAttribute(always_inline) 43*33bb201bSJacob Faibussowitsch # define MY_ALWAYS_INLINE __attribute__((always_inline)) 44*33bb201bSJacob Faibussowitsch #else 45*33bb201bSJacob Faibussowitsch # define MY_ALWAYS_INLINE 46*33bb201bSJacob Faibussowitsch #endif 47*33bb201bSJacob Faibussowitsch 48*33bb201bSJacob Faibussowitsch void foo(void) MY_ALWAYS_INLINE; 49*33bb201bSJacob Faibussowitsch .ve 50*33bb201bSJacob Faibussowitsch 51*33bb201bSJacob Faibussowitsch but can also be used in regular code 52*33bb201bSJacob Faibussowitsch 53*33bb201bSJacob Faibussowitsch .vb 54*33bb201bSJacob Faibussowitsch if (PetscHasAttribute(some_attribute)) { 55*33bb201bSJacob Faibussowitsch foo(); 56*33bb201bSJacob Faibussowitsch } else { 57*33bb201bSJacob Faibussowitsch bar(); 58*33bb201bSJacob Faibussowitsch } 59*33bb201bSJacob Faibussowitsch .ve 60*33bb201bSJacob Faibussowitsch 61*33bb201bSJacob Faibussowitsch Level: advanced 62*33bb201bSJacob Faibussowitsch 63*33bb201bSJacob Faibussowitsch .seealso: PetscDefined(), PetscLikely(), PetscUnlikely() 64*33bb201bSJacob Faibussowitsch M*/ 65*33bb201bSJacob Faibussowitsch #if defined(__has_attribute) 66*33bb201bSJacob Faibussowitsch # define PetscHasAttribute(x) __has_attribute(x) 67*33bb201bSJacob Faibussowitsch #else 68*33bb201bSJacob Faibussowitsch # define PetscHasAttribute(x) 0 69*33bb201bSJacob Faibussowitsch #endif 70*33bb201bSJacob Faibussowitsch 71*33bb201bSJacob Faibussowitsch /* placeholder defines */ 72*33bb201bSJacob Faibussowitsch #if PetscHasAttribute(format) 73*33bb201bSJacob Faibussowitsch # define PETSC_ATTRIBUTE_FORMAT(strIdx,vaArgIdx) 74*33bb201bSJacob Faibussowitsch #else 75*33bb201bSJacob Faibussowitsch # define PETSC_ATTRIBUTE_FORMAT(strIdx,vaArgIdx) 76*33bb201bSJacob Faibussowitsch #endif 77*33bb201bSJacob Faibussowitsch 7873fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 7973fca5a0SBarry Smith /* 8073fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 8173fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 8273fca5a0SBarry Smith */ 83216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 8473fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 8573fca5a0SBarry Smith # endif 86216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 8773fca5a0SBarry Smith # define _BSD_SOURCE 8873fca5a0SBarry Smith # endif 8907f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 9007f00807SSatish Balay # define _DEFAULT_SOURCE 9107f00807SSatish Balay # endif 92ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 93ea0fecefSShri Abhyankar # define _GNU_SOURCE 94ea0fecefSShri Abhyankar # endif 9573fca5a0SBarry Smith #endif 9673fca5a0SBarry Smith 97df4397b0SStefano Zampini #include <petscsystypes.h> 98df4397b0SStefano Zampini 99d382aafbSBarry Smith /* ========================================================================== */ 100d382aafbSBarry Smith /* 1012c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 102d382aafbSBarry Smith */ 1031ec50b02SJed Brown #if defined(__cplusplus) 1041ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 1051ec50b02SJed Brown #else 1061ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 1071ec50b02SJed Brown #endif 108d382aafbSBarry Smith 109c5e4d11fSDmitry Karpeev /* ========================================================================== */ 110c5e4d11fSDmitry Karpeev /* 111c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 1121cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 1131cc8b206SBarry Smith file within an extern "C". 114c5e4d11fSDmitry Karpeev */ 115c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 116c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 117c5e4d11fSDmitry Karpeev #endif 118c5e4d11fSDmitry Karpeev 119ed938b00SJed Brown #if defined(__cplusplus) 120ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 121ed938b00SJed Brown #else 122ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 123ed938b00SJed Brown #endif 124ed938b00SJed Brown 125ed938b00SJed Brown #if defined(__cplusplus) 12658c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 127ed938b00SJed Brown #else 12858c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 129ed938b00SJed Brown #endif 130ed938b00SJed Brown 13158c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 13258c433abSLisandro Dalcin 133ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 134014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 135014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 13621f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 13726703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 13826703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 13926703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 14026703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 14126703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 142014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 143014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 14421f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 145d382aafbSBarry Smith #else 146014dd563SJed Brown # define PETSC_DLLEXPORT 147014dd563SJed Brown # define PETSC_DLLIMPORT 14821f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 149014dd563SJed Brown #endif 150014dd563SJed Brown 151014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 152014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 153014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 154014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 155014dd563SJed Brown #endif 156014dd563SJed Brown 1571cc8b206SBarry Smith /* 1581cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1591cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1601cc8b206SBarry Smith used from C and are always visible in the shared libraries 1611cc8b206SBarry Smith */ 1622c280183SJed Brown #if defined(__cplusplus) 163014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 164638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 16521f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 166014dd563SJed Brown #else 167014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 168638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1696258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 170d382aafbSBarry Smith #endif 17127710113SBarry Smith 172193d546dSJacob Faibussowitsch #if defined(PETSC_USE_SINGLE_LIBRARY) 173193d546dSJacob Faibussowitsch # define PETSC_SINGLE_LIBRARY_INTERN PETSC_INTERN 174193d546dSJacob Faibussowitsch #else 175193d546dSJacob Faibussowitsch # define PETSC_SINGLE_LIBRARY_INTERN PETSC_EXTERN 176193d546dSJacob Faibussowitsch #endif 177193d546dSJacob Faibussowitsch 1780609f53bSJacob Faibussowitsch /* C++11 features */ 179030f984aSJacob Faibussowitsch #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX11) 180030f984aSJacob Faibussowitsch # define PETSC_NULLPTR nullptr 181030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR constexpr 182030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT noexcept 183030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) noexcept(cond_) 184030f984aSJacob Faibussowitsch #else 185030f984aSJacob Faibussowitsch # define PETSC_NULLPTR NULL 186030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR 187030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT 188030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) 1890609f53bSJacob Faibussowitsch #endif /* __cplusplus && PETSC_HAVE_CXX_DIALECT_CXX11 */ 1900609f53bSJacob Faibussowitsch 1910609f53bSJacob Faibussowitsch /* C++14 features */ 1920609f53bSJacob Faibussowitsch #if defined(PETSC_HAVE_CXX_DIALECT_CXX14) 1930609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_14 PETSC_CONSTEXPR 1940609f53bSJacob Faibussowitsch #else 1950609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_14 196030f984aSJacob Faibussowitsch #endif 197030f984aSJacob Faibussowitsch 1980609f53bSJacob Faibussowitsch /* C++17 features */ 1990a996781SJunchao Zhang /* We met cases that the host CXX compiler (say mpicxx) supports C++17, but nvcc does not agree, even with -ccbin mpicxx! */ 2000a996781SJunchao Zhang #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX17) && (!defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_CUDA_DIALECT_CXX17)) 201030f984aSJacob Faibussowitsch # define PETSC_NODISCARD [[nodiscard]] 2020609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_17 PETSC_CONSTEXPR 203030f984aSJacob Faibussowitsch #else 204030f984aSJacob Faibussowitsch # define PETSC_NODISCARD 2050609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_17 206030f984aSJacob Faibussowitsch #endif 207030f984aSJacob Faibussowitsch 2082c8e378dSBarry Smith #include <petscversion.h> 209a17b96a8SKyle Gerard Felker #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://petsc.org/\n" 210d382aafbSBarry Smith 211d382aafbSBarry Smith /* ========================================================================== */ 212d382aafbSBarry Smith 213d382aafbSBarry Smith /* 214d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 215d382aafbSBarry Smith 216d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 217d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 218d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 219d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 220d382aafbSBarry Smith mpicxx.h directly in their code 221d382aafbSBarry Smith */ 222fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 223d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 224fa9e63e2SJed Brown #endif 225fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 226d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 227fa9e63e2SJed Brown #endif 228e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 229e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 230e771154cSJed Brown #else 2312c8e378dSBarry Smith # include <mpi.h> 232e771154cSJed Brown #endif 23365013866SBarry Smith 2344e1ad211SJed Brown /*MC 2354e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 2364e1ad211SJed Brown 2374e1ad211SJed Brown Notes: 2381393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 2391393a3abSPatrick Sanan 2404e1ad211SJed Brown Typical usage is within normal code, 2414e1ad211SJed Brown 2424e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 2434e1ad211SJed Brown 2444e1ad211SJed Brown but can also be used in the preprocessor, 2454e1ad211SJed Brown 2464e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 2474e1ad211SJed Brown $ ... 2484e1ad211SJed Brown $ #else 2494e1ad211SJed Brown 2501393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 2514e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 2524e1ad211SJed Brown 2531393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 2541393a3abSPatrick Sanan 2551393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 2561393a3abSPatrick Sanan 2574e1ad211SJed Brown Developer Notes: 2584e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 2594e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 2604e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 2614e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 2624e1ad211SJed Brown 2634e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 2644e1ad211SJed Brown implementation of variadic macros. 2654e1ad211SJed Brown 2664e1ad211SJed Brown Level: developer 267*33bb201bSJacob Faibussowitsch .seealso: PetscHasAttribute(), PetscUnlikely(), PetscLikely() 2684e1ad211SJed Brown M*/ 2694e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 2704e1ad211SJed Brown # define PetscDefined_arg_1 shift, 2714e1ad211SJed Brown # define PetscDefined_arg_ shift, 2724e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 2734e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 2744e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 275c7faf32eSJacob Faibussowitsch # define PetscDefined____(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 276c7faf32eSJacob Faibussowitsch # define PetscDefined___(value) PetscDefined____(PetscDefined_arg_ ## value) 277c7faf32eSJacob Faibussowitsch # define PetscDefined__(d) PetscDefined___(d) 278c7faf32eSJacob Faibussowitsch # define PetscDefined_(d) PetscDefined__(PETSC_ ## d) 279c7faf32eSJacob Faibussowitsch # define PetscDefined(d) PetscDefined_(d) 2804e1ad211SJed Brown #endif 2814e1ad211SJed Brown 282d382aafbSBarry Smith /* 283a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 284a7886beaSBarry Smith This usually happens because 285a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 286a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 287a7886beaSBarry Smith */ 288a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 289c9b973beSBarry Smith # if !defined(MPIUNI_H) 290a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 291a7886beaSBarry Smith # endif 29241f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 29341f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 29441f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 29541f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 29641f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 29741f4af4cSSatish Balay # endif 29841f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 29941f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 30041f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 30141f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 30241f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 30341f4af4cSSatish Balay # endif 304a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 30541f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 306a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 307ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 308a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 309a7886beaSBarry Smith # endif 310a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 311a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 312a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 313ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 314c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 315a7886beaSBarry Smith # endif 316c93fae50SJacob Faibussowitsch # define PETSC_MPI_COMM_FMT "p" 317c93fae50SJacob Faibussowitsch # define PETSC_MPI_WIN_FMT "p" 318d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 319d97fd468SStefano Zampini # if !defined(MSMPI_VER) 320d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 321d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 322d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 323d97fd468SStefano Zampini # endif 324d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 325d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 326a7886beaSBarry Smith #endif 327a7886beaSBarry Smith 328c93fae50SJacob Faibussowitsch /* Format specifier for printing MPI_Comm (most implementations use 'int' as type) */ 329c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_COMM_FMT) 330c93fae50SJacob Faibussowitsch # define PETSC_MPI_COMM_FMT "d" 331c93fae50SJacob Faibussowitsch #endif 332c93fae50SJacob Faibussowitsch 333c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_WIN_FMT) 334c93fae50SJacob Faibussowitsch # define PETSC_MPI_WIN_FMT "d" 335c93fae50SJacob Faibussowitsch #endif 336c93fae50SJacob Faibussowitsch 337a7886beaSBarry Smith /* 3382981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 339d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 340d382aafbSBarry Smith */ 341d382aafbSBarry Smith #include <stdio.h> 342d382aafbSBarry Smith 343d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 344d382aafbSBarry Smith #if !defined(MPIAPI) 345d382aafbSBarry Smith #define MPIAPI 346d382aafbSBarry Smith #endif 347d382aafbSBarry Smith 3481cc8b206SBarry Smith /* 3491cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 3501cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 3511cc8b206SBarry Smith does not match the actual type of the argument being passed in 3521cc8b206SBarry Smith */ 353c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 354894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 355894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 3568ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 3578ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 358894dd566SJed Brown # endif 359894dd566SJed Brown #endif 360894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 361894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 3628ad47952SJed Brown # define PetscAttrMPITypeTag(type) 3638ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 364894dd566SJed Brown #endif 365b3506946SBarry Smith 3665a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 367df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 368e28ce29aSPatrick Sanan 369e28ce29aSPatrick Sanan /*MC 370e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 371e28ce29aSPatrick Sanan 372e28ce29aSPatrick Sanan Notes: 373e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 374e28ce29aSPatrick Sanan 375e28ce29aSPatrick Sanan Level: beginner 376e28ce29aSPatrick Sanan 377e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 378e28ce29aSPatrick Sanan M*/ 379e28ce29aSPatrick Sanan 3807cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 381b7b8f77aSBarry Smith 382d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 383bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 384a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 385d382aafbSBarry Smith #else 386d382aafbSBarry Smith # define MPIU_INT MPI_INT 387a05e1a72SSatish Balay # define PetscInt_FMT "d" 388d382aafbSBarry Smith #endif 389d382aafbSBarry Smith 390503cfb0cSBarry Smith /* 391503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 392503cfb0cSBarry Smith */ 393e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 394d382aafbSBarry Smith 395d382aafbSBarry Smith /* 396d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 397d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 398d382aafbSBarry Smith */ 399014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 400d382aafbSBarry Smith 401d382aafbSBarry Smith /* 402d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 403d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 404d382aafbSBarry Smith */ 405014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 406d382aafbSBarry Smith 407d382aafbSBarry Smith /*MC 408d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 409d382aafbSBarry Smith 410d382aafbSBarry Smith Synopsis: 411aaa7dc30SBarry Smith #include <petscsys.h> 412ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 413d382aafbSBarry Smith 414eca87e8dSBarry Smith Not Collective 415eca87e8dSBarry Smith 416d382aafbSBarry Smith Input Parameters: 417d382aafbSBarry Smith . cond - condition or expression 418d382aafbSBarry Smith 419e28ce29aSPatrick Sanan Notes: 420e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 421d382aafbSBarry Smith branch is unlikely. 422d382aafbSBarry Smith 423d382aafbSBarry Smith Level: advanced 424d382aafbSBarry Smith 425*33bb201bSJacob Faibussowitsch .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ, PetscDefined(), PetscHasAttribute() 426d382aafbSBarry Smith M*/ 427d382aafbSBarry Smith 428d382aafbSBarry Smith /*MC 429d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 430d382aafbSBarry Smith 431d382aafbSBarry Smith Synopsis: 432aaa7dc30SBarry Smith #include <petscsys.h> 43323072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 434d382aafbSBarry Smith 435eca87e8dSBarry Smith Not Collective 436eca87e8dSBarry Smith 437d382aafbSBarry Smith Input Parameters: 438d382aafbSBarry Smith . cond - condition or expression 439d382aafbSBarry Smith 440e28ce29aSPatrick Sanan Notes: 441e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 442d382aafbSBarry Smith branch is likely. 443d382aafbSBarry Smith 444d382aafbSBarry Smith Level: advanced 445d382aafbSBarry Smith 446*33bb201bSJacob Faibussowitsch .seealso: PetscUnlikely(), PetscDefined(), PetscHasAttribute() 447d382aafbSBarry Smith M*/ 448d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 449d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 450d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 451d382aafbSBarry Smith #else 452cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 453cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 454d382aafbSBarry Smith #endif 455d382aafbSBarry Smith 456cf9c20a2SJed Brown /*MC 457cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 458cf9c20a2SJed Brown 459cf9c20a2SJed Brown Synopsis: 460cf9c20a2SJed Brown #include <petscsys.h> 461cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 462cf9c20a2SJed Brown 463cf9c20a2SJed Brown Not Collective 464cf9c20a2SJed Brown 465cf9c20a2SJed Brown Input Parameters: 466cf9c20a2SJed Brown . cond - condition or expression 467cf9c20a2SJed Brown 468cf9c20a2SJed Brown Notes: 469cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 470cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 471cf9c20a2SJed Brown 472cf9c20a2SJed Brown Level: advanced 473cf9c20a2SJed Brown 474cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 475cf9c20a2SJed Brown M*/ 476cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 477cf9c20a2SJed Brown 478c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 479c8b9133aSSatish Balay 4805c993f7fSStefano Zampini #if defined(__NEC__) 4815c993f7fSStefano Zampini # define PetscPragmaSIMD _Pragma("_NEC ivdep") 4825c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 483c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 4841dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 485c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 486160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 487c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 488160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 489160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 490c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 491c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 492c8b9133aSSatish Balay #else 493c8b9133aSSatish Balay # define PetscPragmaSIMD 494c8b9133aSSatish Balay #endif 495c8b9133aSSatish Balay 496d382aafbSBarry Smith /* 497d382aafbSBarry Smith Declare extern C stuff after including external header files 498d382aafbSBarry Smith */ 499d382aafbSBarry Smith 5006a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 50170b3c8c7SBarry Smith 5026edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 5038b49ba18SBarry Smith /* 504390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 5058b49ba18SBarry Smith */ 5068b49ba18SBarry Smith #include <petscmath.h> 5078b49ba18SBarry Smith 5086a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 509d382aafbSBarry Smith 510d382aafbSBarry Smith /*MC 5110298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 512d382aafbSBarry Smith 513d382aafbSBarry Smith Level: beginner 514d382aafbSBarry Smith 515e28ce29aSPatrick Sanan Note: 516e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 517d382aafbSBarry Smith some default 518d382aafbSBarry Smith 519e28ce29aSPatrick Sanan Fortran Notes: 520e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 521d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 522d382aafbSBarry Smith 523e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 524d382aafbSBarry Smith 525d382aafbSBarry Smith M*/ 5260298fd71SBarry Smith #define PETSC_IGNORE NULL 527d382aafbSBarry Smith 528c528d872SBarry Smith /* This is deprecated */ 529c528d872SBarry Smith #define PETSC_NULL NULL 530c528d872SBarry Smith 531d382aafbSBarry Smith /*MC 532557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 533557d4da8SBarry Smith where you wish PETSc to use the default. 534557d4da8SBarry Smith 535557d4da8SBarry Smith Level: beginner 536557d4da8SBarry Smith 537e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 538557d4da8SBarry Smith 539557d4da8SBarry Smith M*/ 540557d4da8SBarry Smith #define PETSC_DECIDE -1 541557d4da8SBarry Smith 542557d4da8SBarry Smith /*MC 543d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 544d382aafbSBarry Smith where you wish PETSc to compute the required value. 545d382aafbSBarry Smith 546d382aafbSBarry Smith Level: beginner 547d382aafbSBarry Smith 548e28ce29aSPatrick Sanan Developer Note: 549e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 550557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 551557d4da8SBarry Smith 5520298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 553d382aafbSBarry Smith 554d382aafbSBarry Smith M*/ 555d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 556d382aafbSBarry Smith 557d382aafbSBarry Smith /*MC 558557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 559557d4da8SBarry Smith where you wish PETSc to use the default. 560557d4da8SBarry Smith 561557d4da8SBarry Smith Level: beginner 562557d4da8SBarry Smith 563e28ce29aSPatrick Sanan Fortran Notes: 564e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 565557d4da8SBarry Smith 5660298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 567557d4da8SBarry Smith 568557d4da8SBarry Smith M*/ 569557d4da8SBarry Smith #define PETSC_DEFAULT -2 570557d4da8SBarry Smith 571557d4da8SBarry Smith /*MC 572d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 573ea8fe74dSBarry Smith all the processes that PETSc knows about. 574d382aafbSBarry Smith 575d382aafbSBarry Smith Level: beginner 576d382aafbSBarry Smith 577e28ce29aSPatrick Sanan Notes: 578e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 579d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 580d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 581a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 582a990b902SBarry Smith 583a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 584a990b902SBarry Smith is called because it may not have a valid value yet. 585d382aafbSBarry Smith 586d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 587d382aafbSBarry Smith 588d382aafbSBarry Smith M*/ 589014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 590d382aafbSBarry Smith 591d382aafbSBarry Smith /*MC 592503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 593d382aafbSBarry Smith 594d382aafbSBarry Smith Level: beginner 595d382aafbSBarry Smith 596e28ce29aSPatrick Sanan Notes: 597e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 598a990b902SBarry Smith 599d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 600d382aafbSBarry Smith 601d382aafbSBarry Smith M*/ 602d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 603d382aafbSBarry Smith 6046de5d289SStefano Zampini /*MC 6056de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 6066de5d289SStefano Zampini MPI with MPI_Init_thread. 6076de5d289SStefano Zampini 6086de5d289SStefano Zampini Level: beginner 6096de5d289SStefano Zampini 6106de5d289SStefano Zampini Notes: 6116de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 6126de5d289SStefano Zampini 6136de5d289SStefano Zampini .seealso: PetscInitialize() 6146de5d289SStefano Zampini 6156de5d289SStefano Zampini M*/ 6166de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 6176de5d289SStefano Zampini 618d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 6198ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 620014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 621014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 6224cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 623d382aafbSBarry Smith 624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 627d382aafbSBarry Smith 62859e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 62959e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 63059e55d94SJunchao Zhang #endif 63159e55d94SJunchao Zhang 63271438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 63371438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 63471438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 63571438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 63671438e86SJunchao Zhang #endif 63771438e86SJunchao Zhang 638540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 639540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 640540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 641540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 642540e20f2SPierre Jolivet #endif 643540e20f2SPierre Jolivet 644d382aafbSBarry Smith /*MC 64595dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 646d382aafbSBarry Smith 647eca87e8dSBarry Smith Synopsis: 648aaa7dc30SBarry Smith #include <petscsys.h> 649eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 650eca87e8dSBarry Smith 651eca87e8dSBarry Smith Not Collective 652eca87e8dSBarry Smith 653d382aafbSBarry Smith Input Parameter: 654d382aafbSBarry Smith . m - number of bytes to allocate 655d382aafbSBarry Smith 656d382aafbSBarry Smith Output Parameter: 657d382aafbSBarry Smith . result - memory allocated 658d382aafbSBarry Smith 659d382aafbSBarry Smith Level: beginner 660d382aafbSBarry Smith 66149d7da52SJed Brown Notes: 66249d7da52SJed Brown Memory is always allocated at least double aligned 663d382aafbSBarry Smith 66449d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 665d382aafbSBarry Smith 666d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 667d382aafbSBarry Smith 668d382aafbSBarry Smith M*/ 669071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 670d382aafbSBarry Smith 671d382aafbSBarry Smith /*MC 6723221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 6733221ece2SMatthew G. Knepley 6743221ece2SMatthew G. Knepley Synopsis: 6753221ece2SMatthew G. Knepley #include <petscsys.h> 6763221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 6773221ece2SMatthew G. Knepley 6783221ece2SMatthew G. Knepley Not Collective 6793221ece2SMatthew G. Knepley 6803221ece2SMatthew G. Knepley Input Parameters: 6813221ece2SMatthew G. Knepley + m - number of bytes to allocate 68292f119d6SBarry Smith - result - previous memory 6833221ece2SMatthew G. Knepley 6843221ece2SMatthew G. Knepley Output Parameter: 6853221ece2SMatthew G. Knepley . result - new memory allocated 6863221ece2SMatthew G. Knepley 6873221ece2SMatthew G. Knepley Level: developer 6883221ece2SMatthew G. Knepley 6893221ece2SMatthew G. Knepley Notes: 6903221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6913221ece2SMatthew G. Knepley 6923221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6933221ece2SMatthew G. Knepley 6943221ece2SMatthew G. Knepley M*/ 6953221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6963221ece2SMatthew G. Knepley 6973221ece2SMatthew G. Knepley /*MC 698503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 699d382aafbSBarry Smith 700d382aafbSBarry Smith Synopsis: 701aaa7dc30SBarry Smith #include <petscsys.h> 702d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 703d382aafbSBarry Smith 704eca87e8dSBarry Smith Not Collective 705eca87e8dSBarry Smith 706eca87e8dSBarry Smith Input Parameters: 707eca87e8dSBarry Smith . addr - address to align (any pointer type) 708eca87e8dSBarry Smith 709d382aafbSBarry Smith Level: developer 710d382aafbSBarry Smith 711d382aafbSBarry Smith .seealso: PetscMallocAlign() 712d382aafbSBarry Smith 713d382aafbSBarry Smith M*/ 714d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 715d382aafbSBarry Smith 716d382aafbSBarry Smith /*MC 7178f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 7188f51dc47SJunchao Zhang 7198f51dc47SJunchao Zhang Synopsis: 7208f51dc47SJunchao Zhang #include <petscsys.h> 7218f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 7228f51dc47SJunchao Zhang 7238f51dc47SJunchao Zhang Not Collective 7248f51dc47SJunchao Zhang 7258f51dc47SJunchao Zhang Input Parameter: 7268f51dc47SJunchao Zhang . m - number of bytes to allocate 7278f51dc47SJunchao Zhang 7288f51dc47SJunchao Zhang Output Parameter: 7298f51dc47SJunchao Zhang . result - memory allocated 7308f51dc47SJunchao Zhang 7318f51dc47SJunchao Zhang Level: beginner 7328f51dc47SJunchao Zhang 7338f51dc47SJunchao Zhang Notes: 7348f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 7358f51dc47SJunchao Zhang 7368f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 7378f51dc47SJunchao Zhang 7388f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 7398f51dc47SJunchao Zhang 7408f51dc47SJunchao Zhang M*/ 7418f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 7428f51dc47SJunchao Zhang 7438f51dc47SJunchao Zhang /*MC 744785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 745d382aafbSBarry Smith 746eca87e8dSBarry Smith Synopsis: 747aaa7dc30SBarry Smith #include <petscsys.h> 748785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 749785e854fSJed Brown 750785e854fSJed Brown Not Collective 751785e854fSJed Brown 752785e854fSJed Brown Input Parameter: 753390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 754785e854fSJed Brown 755785e854fSJed Brown Output Parameter: 7561fe1b817SJunchao Zhang . r1 - memory allocated 757785e854fSJed Brown 758e28ce29aSPatrick Sanan Note: 759e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 760390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 761390e1bf2SBarry Smith $ PetscInt *id; 762390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 763390e1bf2SBarry Smith not 764390e1bf2SBarry Smith $ PetscInt *id; 765390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 766390e1bf2SBarry Smith 7671fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 768390e1bf2SBarry Smith 769390e1bf2SBarry Smith Level: beginner 770785e854fSJed Brown 7711795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 772785e854fSJed Brown 773785e854fSJed Brown M*/ 7742553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 775785e854fSJed Brown 776785e854fSJed Brown /*MC 7771795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 7781795a4d1SJed Brown 7791795a4d1SJed Brown Synopsis: 780aaa7dc30SBarry Smith #include <petscsys.h> 7811795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 7821795a4d1SJed Brown 7831795a4d1SJed Brown Not Collective 7841795a4d1SJed Brown 7851795a4d1SJed Brown Input Parameter: 7861795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7871795a4d1SJed Brown 7881795a4d1SJed Brown Output Parameter: 7891fe1b817SJunchao Zhang . r1 - memory allocated 7901795a4d1SJed Brown 791e28ce29aSPatrick Sanan Notes: 792e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 793390e1bf2SBarry Smith 794390e1bf2SBarry Smith Level: beginner 7951795a4d1SJed Brown 7961795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7971795a4d1SJed Brown 7981795a4d1SJed Brown M*/ 7992553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 8001795a4d1SJed Brown 8011795a4d1SJed Brown /*MC 802dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 803d382aafbSBarry Smith 804eca87e8dSBarry Smith Synopsis: 805aaa7dc30SBarry Smith #include <petscsys.h> 806dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 807eca87e8dSBarry Smith 808eca87e8dSBarry Smith Not Collective 809eca87e8dSBarry Smith 810d8d19677SJose E. Roman Input Parameters: 811d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 812dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 813d382aafbSBarry Smith 814d8d19677SJose E. Roman Output Parameters: 815d382aafbSBarry Smith + r1 - memory allocated in first chunk 816d382aafbSBarry Smith - r2 - memory allocated in second chunk 817d382aafbSBarry Smith 818d382aafbSBarry Smith Level: developer 819d382aafbSBarry Smith 8201795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 821d382aafbSBarry Smith 822d382aafbSBarry Smith M*/ 8232553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 824d382aafbSBarry Smith 825d382aafbSBarry Smith /*MC 8261795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 827d382aafbSBarry Smith 828eca87e8dSBarry Smith Synopsis: 829aaa7dc30SBarry Smith #include <petscsys.h> 8301795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 831eca87e8dSBarry Smith 832eca87e8dSBarry Smith Not Collective 833eca87e8dSBarry Smith 834d8d19677SJose E. Roman Input Parameters: 835d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 8361795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 8371795a4d1SJed Brown 838d8d19677SJose E. Roman Output Parameters: 8391795a4d1SJed Brown + r1 - memory allocated in first chunk 8401795a4d1SJed Brown - r2 - memory allocated in second chunk 8411795a4d1SJed Brown 8421795a4d1SJed Brown Level: developer 8431795a4d1SJed Brown 8441795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 8451795a4d1SJed Brown 8461795a4d1SJed Brown M*/ 8472553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 8481795a4d1SJed Brown 8491795a4d1SJed Brown /*MC 850dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 851d382aafbSBarry Smith 852d382aafbSBarry Smith Synopsis: 853aaa7dc30SBarry Smith #include <petscsys.h> 854dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 855d382aafbSBarry Smith 856d382aafbSBarry Smith Not Collective 857d382aafbSBarry Smith 858d8d19677SJose E. Roman Input Parameters: 859d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 860d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 861dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 862d382aafbSBarry Smith 863d8d19677SJose E. Roman Output Parameters: 864d382aafbSBarry Smith + r1 - memory allocated in first chunk 865d382aafbSBarry Smith . r2 - memory allocated in second chunk 866d382aafbSBarry Smith - r3 - memory allocated in third chunk 867d382aafbSBarry Smith 868d382aafbSBarry Smith Level: developer 869d382aafbSBarry Smith 8701795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 871d382aafbSBarry Smith 872d382aafbSBarry Smith M*/ 8732553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 874d382aafbSBarry Smith 875d382aafbSBarry Smith /*MC 8761795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 877d382aafbSBarry Smith 878eca87e8dSBarry Smith Synopsis: 879aaa7dc30SBarry Smith #include <petscsys.h> 8801795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 881eca87e8dSBarry Smith 882eca87e8dSBarry Smith Not Collective 883eca87e8dSBarry Smith 884d8d19677SJose E. Roman Input Parameters: 885d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 886d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8871795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8881795a4d1SJed Brown 889d8d19677SJose E. Roman Output Parameters: 8901795a4d1SJed Brown + r1 - memory allocated in first chunk 8911795a4d1SJed Brown . r2 - memory allocated in second chunk 8921795a4d1SJed Brown - r3 - memory allocated in third chunk 8931795a4d1SJed Brown 8941795a4d1SJed Brown Level: developer 8951795a4d1SJed Brown 8961795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8971795a4d1SJed Brown 8981795a4d1SJed Brown M*/ 8992553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 9001795a4d1SJed Brown 9011795a4d1SJed Brown /*MC 902dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 903d382aafbSBarry Smith 904d382aafbSBarry Smith Synopsis: 905aaa7dc30SBarry Smith #include <petscsys.h> 906dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 907d382aafbSBarry Smith 908d382aafbSBarry Smith Not Collective 909d382aafbSBarry Smith 910d8d19677SJose E. Roman Input Parameters: 911d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 912d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 913d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 914dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 915d382aafbSBarry Smith 916d8d19677SJose E. Roman Output Parameters: 917d382aafbSBarry Smith + r1 - memory allocated in first chunk 918d382aafbSBarry Smith . r2 - memory allocated in second chunk 919d382aafbSBarry Smith . r3 - memory allocated in third chunk 920d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 921d382aafbSBarry Smith 922d382aafbSBarry Smith Level: developer 923d382aafbSBarry Smith 9241795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 925d382aafbSBarry Smith 926d382aafbSBarry Smith M*/ 9272553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 928d382aafbSBarry Smith 929d382aafbSBarry Smith /*MC 9301795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 931d382aafbSBarry Smith 932eca87e8dSBarry Smith Synopsis: 933aaa7dc30SBarry Smith #include <petscsys.h> 9341795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 935eca87e8dSBarry Smith 936eca87e8dSBarry Smith Not Collective 937eca87e8dSBarry Smith 938e28ce29aSPatrick Sanan Input Parameters: 939d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 940d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 941d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 9421795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 9431795a4d1SJed Brown 944e28ce29aSPatrick Sanan Output Parameters: 9451795a4d1SJed Brown + r1 - memory allocated in first chunk 9461795a4d1SJed Brown . r2 - memory allocated in second chunk 9471795a4d1SJed Brown . r3 - memory allocated in third chunk 9481795a4d1SJed Brown - r4 - memory allocated in fourth chunk 9491795a4d1SJed Brown 9501795a4d1SJed Brown Level: developer 9511795a4d1SJed Brown 9521795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 9531795a4d1SJed Brown 9541795a4d1SJed Brown M*/ 9552553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 9561795a4d1SJed Brown 9571795a4d1SJed Brown /*MC 958dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 959d382aafbSBarry Smith 960d382aafbSBarry Smith Synopsis: 961aaa7dc30SBarry Smith #include <petscsys.h> 962dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 963d382aafbSBarry Smith 964d382aafbSBarry Smith Not Collective 965d382aafbSBarry Smith 966e28ce29aSPatrick Sanan Input Parameters: 967d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 968d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 969d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 970d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 971dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 972d382aafbSBarry Smith 973e28ce29aSPatrick Sanan Output Parameters: 974d382aafbSBarry Smith + r1 - memory allocated in first chunk 975d382aafbSBarry Smith . r2 - memory allocated in second chunk 976d382aafbSBarry Smith . r3 - memory allocated in third chunk 977d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 978d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 979d382aafbSBarry Smith 980d382aafbSBarry Smith Level: developer 981d382aafbSBarry Smith 9821795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 983d382aafbSBarry Smith 984d382aafbSBarry Smith M*/ 9852553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 986d382aafbSBarry Smith 987d382aafbSBarry Smith /*MC 9881795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 989d382aafbSBarry Smith 990eca87e8dSBarry Smith Synopsis: 991aaa7dc30SBarry Smith #include <petscsys.h> 9921795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 993eca87e8dSBarry Smith 994eca87e8dSBarry Smith Not Collective 995eca87e8dSBarry Smith 996e28ce29aSPatrick Sanan Input Parameters: 997d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 998d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 999d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1000d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 10011795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 10021795a4d1SJed Brown 1003e28ce29aSPatrick Sanan Output Parameters: 10041795a4d1SJed Brown + r1 - memory allocated in first chunk 10051795a4d1SJed Brown . r2 - memory allocated in second chunk 10061795a4d1SJed Brown . r3 - memory allocated in third chunk 10071795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10081795a4d1SJed Brown - r5 - memory allocated in fifth chunk 10091795a4d1SJed Brown 10101795a4d1SJed Brown Level: developer 10111795a4d1SJed Brown 10121795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 10131795a4d1SJed Brown 10141795a4d1SJed Brown M*/ 10152553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 1016d382aafbSBarry Smith 1017d382aafbSBarry Smith /*MC 1018dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 1019d382aafbSBarry Smith 1020d382aafbSBarry Smith Synopsis: 1021aaa7dc30SBarry Smith #include <petscsys.h> 1022dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 1023d382aafbSBarry Smith 1024d382aafbSBarry Smith Not Collective 1025d382aafbSBarry Smith 1026e28ce29aSPatrick Sanan Input Parameters: 1027d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1028d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1029d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1030d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1031d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1032dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 1033d382aafbSBarry Smith 1034e28ce29aSPatrick Sanan Output Parameteasr: 1035d382aafbSBarry Smith + r1 - memory allocated in first chunk 1036d382aafbSBarry Smith . r2 - memory allocated in second chunk 1037d382aafbSBarry Smith . r3 - memory allocated in third chunk 1038d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1039d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1040d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 1041d382aafbSBarry Smith 1042d382aafbSBarry Smith Level: developer 1043d382aafbSBarry Smith 10441795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 1045d382aafbSBarry Smith 1046d382aafbSBarry Smith M*/ 10472553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 1048d382aafbSBarry Smith 1049d382aafbSBarry Smith /*MC 10501795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 1051d382aafbSBarry Smith 1052eca87e8dSBarry Smith Synopsis: 1053aaa7dc30SBarry Smith #include <petscsys.h> 10541795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 1055eca87e8dSBarry Smith 1056eca87e8dSBarry Smith Not Collective 1057eca87e8dSBarry Smith 1058e28ce29aSPatrick Sanan Input Parameters: 1059d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1060d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1061d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1062d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1063d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 10641795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 10651795a4d1SJed Brown 1066e28ce29aSPatrick Sanan Output Parameters: 10671795a4d1SJed Brown + r1 - memory allocated in first chunk 10681795a4d1SJed Brown . r2 - memory allocated in second chunk 10691795a4d1SJed Brown . r3 - memory allocated in third chunk 10701795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10711795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10721795a4d1SJed Brown - r6 - memory allocated in sixth chunk 10731795a4d1SJed Brown 10741795a4d1SJed Brown Level: developer 10751795a4d1SJed Brown 10761795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 10771795a4d1SJed Brown 10781795a4d1SJed Brown M*/ 10792553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 10801795a4d1SJed Brown 10811795a4d1SJed Brown /*MC 1082dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 1083d382aafbSBarry Smith 1084d382aafbSBarry Smith Synopsis: 1085aaa7dc30SBarry Smith #include <petscsys.h> 1086dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1087d382aafbSBarry Smith 1088d382aafbSBarry Smith Not Collective 1089d382aafbSBarry Smith 1090e28ce29aSPatrick Sanan Input Parameters: 1091d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1092d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1093d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1094d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1095d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1096d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1097dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1098d382aafbSBarry Smith 1099e28ce29aSPatrick Sanan Output Parameters: 1100d382aafbSBarry Smith + r1 - memory allocated in first chunk 1101d382aafbSBarry Smith . r2 - memory allocated in second chunk 1102d382aafbSBarry Smith . r3 - memory allocated in third chunk 1103d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1104d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1105d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1106eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1107d382aafbSBarry Smith 1108d382aafbSBarry Smith Level: developer 1109d382aafbSBarry Smith 11101795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1111d382aafbSBarry Smith 1112d382aafbSBarry Smith M*/ 11132553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1114d382aafbSBarry Smith 1115d382aafbSBarry Smith /*MC 11161795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 11171795a4d1SJed Brown 11181795a4d1SJed Brown Synopsis: 1119aaa7dc30SBarry Smith #include <petscsys.h> 11201795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 11211795a4d1SJed Brown 11221795a4d1SJed Brown Not Collective 11231795a4d1SJed Brown 1124e28ce29aSPatrick Sanan Input Parameters: 11251795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 11261795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 11271795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 11281795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 11291795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 11301795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 11311795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 11321795a4d1SJed Brown 1133e28ce29aSPatrick Sanan Output Parameters: 11341795a4d1SJed Brown + r1 - memory allocated in first chunk 11351795a4d1SJed Brown . r2 - memory allocated in second chunk 11361795a4d1SJed Brown . r3 - memory allocated in third chunk 11371795a4d1SJed Brown . r4 - memory allocated in fourth chunk 11381795a4d1SJed Brown . r5 - memory allocated in fifth chunk 11391795a4d1SJed Brown . r6 - memory allocated in sixth chunk 11401795a4d1SJed Brown - r7 - memory allocated in seventh chunk 11411795a4d1SJed Brown 11421795a4d1SJed Brown Level: developer 11431795a4d1SJed Brown 11441795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 11451795a4d1SJed Brown 11461795a4d1SJed Brown M*/ 11472553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 11481795a4d1SJed Brown 11491795a4d1SJed Brown /*MC 1150503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1151d382aafbSBarry Smith 1152eca87e8dSBarry Smith Synopsis: 1153aaa7dc30SBarry Smith #include <petscsys.h> 1154b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1155eca87e8dSBarry Smith 1156eca87e8dSBarry Smith Not Collective 1157eca87e8dSBarry Smith 1158d382aafbSBarry Smith Output Parameter: 1159b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1160d382aafbSBarry Smith 1161d382aafbSBarry Smith Level: beginner 1162d382aafbSBarry Smith 1163390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1164d382aafbSBarry Smith 1165d382aafbSBarry Smith M*/ 1166b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1167ad0619ddSBarry Smith 1168ad0619ddSBarry Smith /*MC 1169b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1170ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1171ad0619ddSBarry Smith 1172ad0619ddSBarry Smith Synopsis: 1173aaa7dc30SBarry Smith #include <petscsys.h> 1174b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1175ad0619ddSBarry Smith 1176ad0619ddSBarry Smith Not Collective 1177ad0619ddSBarry Smith 1178ad0619ddSBarry Smith Input Parameter: 1179b00a9115SJed Brown . obj - object memory is logged to 1180ad0619ddSBarry Smith 1181ad0619ddSBarry Smith Output Parameter: 1182b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1183ad0619ddSBarry Smith 1184ad0619ddSBarry Smith Level: developer 1185ad0619ddSBarry Smith 1186390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1187ad0619ddSBarry Smith 1188ad0619ddSBarry Smith M*/ 1189d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1190d382aafbSBarry Smith 1191d382aafbSBarry Smith /*MC 1192d382aafbSBarry Smith PetscFree - Frees memory 1193d382aafbSBarry Smith 1194eca87e8dSBarry Smith Synopsis: 1195aaa7dc30SBarry Smith #include <petscsys.h> 1196eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1197eca87e8dSBarry Smith 1198eca87e8dSBarry Smith Not Collective 1199eca87e8dSBarry Smith 1200d382aafbSBarry Smith Input Parameter: 12017f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1202d382aafbSBarry Smith 1203d382aafbSBarry Smith Level: beginner 1204d382aafbSBarry Smith 120549d7da52SJed Brown Notes: 1206390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1207390e1bf2SBarry Smith 120849d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1209d382aafbSBarry Smith 1210390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1211d382aafbSBarry Smith 1212d382aafbSBarry Smith M*/ 1213ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1214d382aafbSBarry Smith 1215d382aafbSBarry Smith /*MC 1216d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1217d382aafbSBarry Smith 1218eca87e8dSBarry Smith Synopsis: 1219aaa7dc30SBarry Smith #include <petscsys.h> 1220eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1221eca87e8dSBarry Smith 1222eca87e8dSBarry Smith Not Collective 1223eca87e8dSBarry Smith 1224e28ce29aSPatrick Sanan Input Parameters: 1225d382aafbSBarry Smith + memory1 - memory to free 1226d382aafbSBarry Smith - memory2 - 2nd memory to free 1227d382aafbSBarry Smith 1228d382aafbSBarry Smith Level: developer 1229d382aafbSBarry Smith 123095452b02SPatrick Sanan Notes: 123195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1232d382aafbSBarry Smith 1233d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1234d382aafbSBarry Smith 1235d382aafbSBarry Smith M*/ 1236ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1237d382aafbSBarry Smith 1238d382aafbSBarry Smith /*MC 1239d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1240d382aafbSBarry Smith 1241eca87e8dSBarry Smith Synopsis: 1242aaa7dc30SBarry Smith #include <petscsys.h> 1243eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1244eca87e8dSBarry Smith 1245eca87e8dSBarry Smith Not Collective 1246eca87e8dSBarry Smith 1247e28ce29aSPatrick Sanan Input Parameters: 1248d382aafbSBarry Smith + memory1 - memory to free 1249d382aafbSBarry Smith . memory2 - 2nd memory to free 1250d382aafbSBarry Smith - memory3 - 3rd memory to free 1251d382aafbSBarry Smith 1252d382aafbSBarry Smith Level: developer 1253d382aafbSBarry Smith 125495452b02SPatrick Sanan Notes: 125595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1256d382aafbSBarry Smith 1257d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1258d382aafbSBarry Smith 1259d382aafbSBarry Smith M*/ 1260ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1261d382aafbSBarry Smith 1262d382aafbSBarry Smith /*MC 1263d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1264d382aafbSBarry Smith 1265eca87e8dSBarry Smith Synopsis: 1266aaa7dc30SBarry Smith #include <petscsys.h> 1267eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1268eca87e8dSBarry Smith 1269eca87e8dSBarry Smith Not Collective 1270eca87e8dSBarry Smith 1271e28ce29aSPatrick Sanan Input Parameters: 1272d382aafbSBarry Smith + m1 - memory to free 1273d382aafbSBarry Smith . m2 - 2nd memory to free 1274d382aafbSBarry Smith . m3 - 3rd memory to free 1275d382aafbSBarry Smith - m4 - 4th memory to free 1276d382aafbSBarry Smith 1277d382aafbSBarry Smith Level: developer 1278d382aafbSBarry Smith 127995452b02SPatrick Sanan Notes: 128095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1281d382aafbSBarry Smith 1282d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1283d382aafbSBarry Smith 1284d382aafbSBarry Smith M*/ 1285ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1286d382aafbSBarry Smith 1287d382aafbSBarry Smith /*MC 1288d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1289d382aafbSBarry Smith 1290eca87e8dSBarry Smith Synopsis: 1291aaa7dc30SBarry Smith #include <petscsys.h> 1292eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1293eca87e8dSBarry Smith 1294eca87e8dSBarry Smith Not Collective 1295eca87e8dSBarry Smith 1296e28ce29aSPatrick Sanan Input Parameters: 1297d382aafbSBarry Smith + m1 - memory to free 1298d382aafbSBarry Smith . m2 - 2nd memory to free 1299d382aafbSBarry Smith . m3 - 3rd memory to free 1300d382aafbSBarry Smith . m4 - 4th memory to free 1301d382aafbSBarry Smith - m5 - 5th memory to free 1302d382aafbSBarry Smith 1303d382aafbSBarry Smith Level: developer 1304d382aafbSBarry Smith 130595452b02SPatrick Sanan Notes: 130695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1307d382aafbSBarry Smith 1308d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1309d382aafbSBarry Smith 1310d382aafbSBarry Smith M*/ 1311ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1312d382aafbSBarry Smith 1313d382aafbSBarry Smith /*MC 1314d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1315d382aafbSBarry Smith 1316eca87e8dSBarry Smith Synopsis: 1317aaa7dc30SBarry Smith #include <petscsys.h> 1318eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1319eca87e8dSBarry Smith 1320eca87e8dSBarry Smith Not Collective 1321eca87e8dSBarry Smith 1322e28ce29aSPatrick Sanan Input Parameters: 1323d382aafbSBarry Smith + m1 - memory to free 1324d382aafbSBarry Smith . m2 - 2nd memory to free 1325d382aafbSBarry Smith . m3 - 3rd memory to free 1326d382aafbSBarry Smith . m4 - 4th memory to free 1327d382aafbSBarry Smith . m5 - 5th memory to free 1328d382aafbSBarry Smith - m6 - 6th memory to free 1329d382aafbSBarry Smith 1330d382aafbSBarry Smith Level: developer 1331d382aafbSBarry Smith 133295452b02SPatrick Sanan Notes: 133395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1334d382aafbSBarry Smith 1335d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1336d382aafbSBarry Smith 1337d382aafbSBarry Smith M*/ 1338ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1339d382aafbSBarry Smith 1340d382aafbSBarry Smith /*MC 1341d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1342d382aafbSBarry Smith 1343eca87e8dSBarry Smith Synopsis: 1344aaa7dc30SBarry Smith #include <petscsys.h> 1345eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1346eca87e8dSBarry Smith 1347eca87e8dSBarry Smith Not Collective 1348eca87e8dSBarry Smith 1349e28ce29aSPatrick Sanan Input Parameters: 1350d382aafbSBarry Smith + m1 - memory to free 1351d382aafbSBarry Smith . m2 - 2nd memory to free 1352d382aafbSBarry Smith . m3 - 3rd memory to free 1353d382aafbSBarry Smith . m4 - 4th memory to free 1354d382aafbSBarry Smith . m5 - 5th memory to free 1355d382aafbSBarry Smith . m6 - 6th memory to free 1356d382aafbSBarry Smith - m7 - 7th memory to free 1357d382aafbSBarry Smith 1358d382aafbSBarry Smith Level: developer 1359d382aafbSBarry Smith 136095452b02SPatrick Sanan Notes: 136195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1362d382aafbSBarry Smith 1363d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1364d382aafbSBarry Smith PetscMalloc7() 1365d382aafbSBarry Smith 1366d382aafbSBarry Smith M*/ 1367ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1368d382aafbSBarry Smith 1369ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1370ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1371071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1372efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 13733221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1374ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 137592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1377d382aafbSBarry Smith 1378d382aafbSBarry Smith /* 1379c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1380c1706be6SHong Zhang */ 1381c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1382c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 138331f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 138431f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 138531f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 138631f06eaaSHong Zhang #endif 138759af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 138859af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 138959af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 139059af0bd3SScott Kruger #endif 139159af0bd3SScott Kruger 1392a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 139336763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1394a5057860SBarry Smith 1395a5057860SBarry Smith /* 139666d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1397d382aafbSBarry Smith */ 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 139992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1402e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1403e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 140492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 140592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1406efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 140792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 140892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1409608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1410608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1411d382aafbSBarry Smith 14126a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 14168e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1417d382aafbSBarry Smith 1418d382aafbSBarry Smith /* 1419d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1420d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1421d382aafbSBarry Smith functionality and/or error checking. 1422d382aafbSBarry Smith */ 1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1425d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1433a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 14372f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 14422c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 144547340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 14466fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 14476991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 14486991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1450d382aafbSBarry Smith 1451573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1452573b0fb4SBarry Smith 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1456d382aafbSBarry Smith 1457e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1458a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1459a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1460a53986e1SJed Brown 1461d382aafbSBarry Smith /* 1462d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1463d382aafbSBarry Smith */ 1464367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1465570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1466de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1467014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1468014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1469d9822059SBarry Smith #else 1470de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1471d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1472d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1473d9822059SBarry Smith #endif 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1475d382aafbSBarry Smith 1476014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1477014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1478eb3f98d2SBarry Smith 147995c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1480d6a4318aSJed Brown 1481639ff905SBarry Smith /* 1482639ff905SBarry Smith Defines PETSc error handling. 1483639ff905SBarry Smith */ 1484639ff905SBarry Smith #include <petscerror.h> 1485d382aafbSBarry Smith 14860700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1487014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1488014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 149081256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 149181256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 149281256985SMatthew G. Knepley 1493d382aafbSBarry Smith /* 1494d382aafbSBarry Smith Routines that get memory usage information from the OS 1495d382aafbSBarry Smith */ 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1499b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1500d382aafbSBarry Smith 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1502d382aafbSBarry Smith 1503d382aafbSBarry Smith /* 1504d382aafbSBarry Smith Initialization of PETSc 1505d382aafbSBarry Smith */ 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1516d382aafbSBarry Smith 1517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1518607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1519d382aafbSBarry Smith 1520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1524d382aafbSBarry Smith 1525a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1526a50e088cSMatthew G. Knepley 1527d382aafbSBarry Smith /* 1528d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 15292981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1530d382aafbSBarry Smith */ 1531638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1532638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1533638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1534d382aafbSBarry Smith 1535d382aafbSBarry Smith /* 1536d382aafbSBarry Smith Functions that can act on any PETSc object. 1537d382aafbSBarry Smith */ 1538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1546014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1547014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1554014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1555014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1556bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1557bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 15600eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 15610eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1562014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1563d382aafbSBarry Smith 1564665c2dedSJed Brown #include <petscviewertypes.h> 1565639ff905SBarry Smith #include <petscoptions.h> 1566639ff905SBarry Smith 1567608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1568608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1569608c71bfSMatthew G. Knepley 15700633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 15710633abcbSJed Brown 1572c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1573dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1574639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 15750005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 15760005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1584685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1585014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1586014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15874099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1589b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1592d382aafbSBarry Smith 1593e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15947aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1595e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1596e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1597e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1598e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1599e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1600e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1601e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1602e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1603e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 160415681b3cSBarry Smith 1605ec7429eaSBarry Smith #else 16067aab2a10SBarry Smith #define PetscSAWsBlock() 0 1607e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1608e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1609e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1610e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1611e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1612e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1613e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1614e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1615e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 161615681b3cSBarry Smith 1617ec7429eaSBarry Smith #endif 1618b90c6cbeSBarry Smith 161982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 162082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 162182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1622258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1623258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1624258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1625258ec3d2SMatthew G. Knepley #endif 16267d5d4d99SBarry Smith 16275fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1628a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 16295fe58b6fSBarry Smith #endif 16307eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1631a64a8e02SBarry Smith 1632140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1633140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1634140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1635140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1636140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1637140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1638d382aafbSBarry Smith 1639d382aafbSBarry Smith /* 1640503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1641d382aafbSBarry Smith link libraries that will be loaded as needed. 1642d382aafbSBarry Smith */ 1643a240a19fSJed Brown 1644a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1645a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1646140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 16471c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 16481c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 164944ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1650140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1651140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1652140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1653d382aafbSBarry Smith 1654014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1655014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1656014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1660014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1662d382aafbSBarry Smith 1663d382aafbSBarry Smith /* 1664d382aafbSBarry Smith Useful utility routines 1665d382aafbSBarry Smith */ 1666014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1667014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1668d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1669014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1670014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1671014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1672014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1673dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[2],PetscInt[2]); 1674dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[2],PetscReal[2]); 1675d382aafbSBarry Smith 167664ac3b0dSPatrick Sanan /*MC 1677ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1678503cfb0cSBarry Smith 1679e28ce29aSPatrick Sanan Notes: 1680e28ce29aSPatrick Sanan This is useful in cases like 1681503cfb0cSBarry Smith $ int *a; 1682ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 16831cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 168464ac3b0dSPatrick Sanan 168564ac3b0dSPatrick Sanan Level: beginner 168664ac3b0dSPatrick Sanan 168764ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 168864ac3b0dSPatrick Sanan M*/ 1689d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1690503cfb0cSBarry Smith 1691d382aafbSBarry Smith /*MC 1692d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1693d382aafbSBarry Smith 1694d382aafbSBarry Smith Synopsis: 1695aaa7dc30SBarry Smith #include <petscsys.h> 1696659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1697d382aafbSBarry Smith 1698659f7ba0SBarry Smith Collective on comm 1699eca87e8dSBarry Smith 1700d382aafbSBarry Smith Input Parameters: 1701659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1702d382aafbSBarry Smith . format - the usual printf() format string 1703659f7ba0SBarry Smith - args - arguments to be printed 1704d382aafbSBarry Smith 1705d382aafbSBarry Smith Level: developer 1706d382aafbSBarry Smith 1707d382aafbSBarry Smith Fortran Note: 1708d382aafbSBarry Smith This routine is not supported in Fortran. 1709d382aafbSBarry Smith 1710659f7ba0SBarry Smith Note: 1711659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1712659f7ba0SBarry Smith 1713659f7ba0SBarry Smith To use, write your own function, for example, 1714659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1715659f7ba0SBarry Smith ${ 1716659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1717659f7ba0SBarry Smith $} 1718659f7ba0SBarry Smith then do the assigment 1719659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1720659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1721659f7ba0SBarry Smith 1722659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1723d382aafbSBarry Smith 1724d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1725d382aafbSBarry Smith M*/ 1726014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1727d382aafbSBarry Smith 1728fcfd50ebSBarry Smith /* 1729fcfd50ebSBarry Smith Defines PETSc profiling. 1730fcfd50ebSBarry Smith */ 17312c8e378dSBarry Smith #include <petsclog.h> 1732fcfd50ebSBarry Smith 1733fcfd50ebSBarry Smith /* 1734fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1735fcfd50ebSBarry Smith */ 1736014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1737014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1738014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1739014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1740014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1741014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1742014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 17431b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1744fcfd50ebSBarry Smith 1745014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1746014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1747014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1748d382aafbSBarry Smith 1749d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1750d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1751d781fa04SBarry Smith 1752d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1753014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1754016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 175574ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1756d382aafbSBarry Smith #endif 1757d382aafbSBarry Smith 1758014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1759014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 17600ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1761014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1762014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1763014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1764014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1765d382aafbSBarry Smith 1766014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1767014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1768014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1769014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1770014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1771014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1772b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1773d382aafbSBarry Smith 1774d382aafbSBarry Smith /* 1775d382aafbSBarry Smith For use in debuggers 1776d382aafbSBarry Smith */ 1777014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1778014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1779014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1780014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1781014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1782d382aafbSBarry Smith 1783a663daf8SBarry Smith #include <stddef.h> 1784a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1785d382aafbSBarry Smith #include <stdlib.h> 17866c7e564aSBarry Smith 17874a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1788d382aafbSBarry Smith #include <xmmintrin.h> 1789d382aafbSBarry Smith #endif 1790d382aafbSBarry Smith 1791d382aafbSBarry Smith /*@C 1792580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1793580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1794580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1795580bdb30SBarry Smith 1796580bdb30SBarry Smith Not Collective 1797580bdb30SBarry Smith 1798580bdb30SBarry Smith Input Parameters: 1799580bdb30SBarry Smith + b - pointer to initial memory space 1800580bdb30SBarry Smith . a - pointer to copy space 1801580bdb30SBarry Smith - n - length (in bytes) of space to copy 1802580bdb30SBarry Smith 1803580bdb30SBarry Smith Level: intermediate 1804580bdb30SBarry Smith 1805580bdb30SBarry Smith Note: 1806857a15f1SBarry Smith PetscArraymove() is preferred 1807580bdb30SBarry Smith This routine is analogous to memmove(). 1808580bdb30SBarry Smith 1809580bdb30SBarry Smith Developers Note: This is inlined for performance 1810580bdb30SBarry Smith 1811580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1812580bdb30SBarry Smith PetscArraymove() 1813580bdb30SBarry Smith @*/ 1814580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1815580bdb30SBarry Smith { 1816580bdb30SBarry Smith PetscFunctionBegin; 1817580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1818580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1819580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1820580bdb30SBarry Smith if (a < b) { 1821580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1822580bdb30SBarry Smith else { 1823580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1824580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1825580bdb30SBarry Smith } 1826580bdb30SBarry Smith } else { 1827580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1828580bdb30SBarry Smith else { 1829580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1830580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1831580bdb30SBarry Smith } 1832580bdb30SBarry Smith } 1833580bdb30SBarry Smith #else 1834580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1835580bdb30SBarry Smith #endif 1836580bdb30SBarry Smith PetscFunctionReturn(0); 1837580bdb30SBarry Smith } 1838580bdb30SBarry Smith 1839d382aafbSBarry Smith /*@C 1840d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1841d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1842d382aafbSBarry Smith PetscMemmove() in that case. 1843d382aafbSBarry Smith 1844d382aafbSBarry Smith Not Collective 1845d382aafbSBarry Smith 1846d382aafbSBarry Smith Input Parameters: 1847d382aafbSBarry Smith + b - pointer to initial memory space 1848d382aafbSBarry Smith - n - length (in bytes) of space to copy 1849d382aafbSBarry Smith 1850d382aafbSBarry Smith Output Parameter: 1851d382aafbSBarry Smith . a - pointer to copy space 1852d382aafbSBarry Smith 1853d382aafbSBarry Smith Level: intermediate 1854d382aafbSBarry Smith 1855d382aafbSBarry Smith Compile Option: 1856d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1857d382aafbSBarry Smith for memory copies on double precision values. 1858d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1859d382aafbSBarry Smith for memory copies on double precision values. 1860d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1861d382aafbSBarry Smith for memory copies on double precision values. 1862d382aafbSBarry Smith 1863d382aafbSBarry Smith Note: 1864580bdb30SBarry Smith Prefer PetscArraycpy() 1865d382aafbSBarry Smith This routine is analogous to memcpy(). 18661fd49c25SBarry Smith Not available from Fortran 18671fd49c25SBarry Smith 1868f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1869f5f57ec0SBarry Smith 1870580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1871d382aafbSBarry Smith 1872d382aafbSBarry Smith @*/ 18737087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1874d382aafbSBarry Smith { 1875d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1876c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1877c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1878a7e36092SMatthew G Knepley PetscFunctionBegin; 1879e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1880e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1881a7e36092SMatthew G Knepley #else 1882d382aafbSBarry Smith PetscFunctionBegin; 1883a7e36092SMatthew G Knepley #endif 1884a47a537aSLisandro Dalcin if (a != b && n > 0) { 1885d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1886e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1887d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1888d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1889d382aafbSBarry Smith #endif 1890d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1891c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1892d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1893d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1894c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1895c5df96a5SBarry Smith PetscErrorCode ierr; 1896c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18978b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1898d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1899d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1900d382aafbSBarry Smith #else 1901d382aafbSBarry Smith size_t i; 1902d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1903d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1904d382aafbSBarry Smith #endif 1905d382aafbSBarry Smith } else { 1906d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1907d382aafbSBarry Smith } 1908d382aafbSBarry Smith #else 1909d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1910d382aafbSBarry Smith #endif 1911d382aafbSBarry Smith } 1912d382aafbSBarry Smith PetscFunctionReturn(0); 1913d382aafbSBarry Smith } 1914d382aafbSBarry Smith 1915d382aafbSBarry Smith /*@C 1916d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1917d382aafbSBarry Smith 1918d382aafbSBarry Smith Not Collective 1919d382aafbSBarry Smith 1920d382aafbSBarry Smith Input Parameters: 1921d382aafbSBarry Smith + a - pointer to beginning memory location 1922d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1923d382aafbSBarry Smith 1924d382aafbSBarry Smith Level: intermediate 1925d382aafbSBarry Smith 1926d382aafbSBarry Smith Compile Option: 1927d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1928d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1929d382aafbSBarry Smith 19301fd49c25SBarry Smith Not available from Fortran 1931857a15f1SBarry Smith Prefer PetscArrayzero() 19321fd49c25SBarry Smith 1933503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1934503cfb0cSBarry Smith 1935580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1936d382aafbSBarry Smith @*/ 19377087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1938d382aafbSBarry Smith { 1939d382aafbSBarry Smith if (n > 0) { 1940d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 194118703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1942d382aafbSBarry Smith #endif 1943d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1944d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1945d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1946d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1947d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1948d382aafbSBarry Smith } else { 1949d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1950d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1951d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1952d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1953d382aafbSBarry Smith } else { 1954d382aafbSBarry Smith #endif 1955d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1956d382aafbSBarry Smith bzero((char *)a,n); 1957d382aafbSBarry Smith #else 1958d382aafbSBarry Smith memset((char*)a,0,n); 1959d382aafbSBarry Smith #endif 1960d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1961d382aafbSBarry Smith } 1962d382aafbSBarry Smith #endif 1963d382aafbSBarry Smith } 1964d382aafbSBarry Smith return 0; 1965d382aafbSBarry Smith } 1966d382aafbSBarry Smith 1967d382aafbSBarry Smith /*MC 1968580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1969580bdb30SBarry Smith 1970580bdb30SBarry Smith Synopsis: 1971580bdb30SBarry Smith #include <petscsys.h> 1972580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1973580bdb30SBarry Smith 1974580bdb30SBarry Smith Not Collective 1975580bdb30SBarry Smith 1976580bdb30SBarry Smith Input Parameters: 1977580bdb30SBarry Smith + str1 - First array 1978580bdb30SBarry Smith . str2 - Second array 1979580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1980580bdb30SBarry Smith 1981580bdb30SBarry Smith Output Parameters: 1982580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1983580bdb30SBarry Smith 1984580bdb30SBarry Smith Level: intermediate 1985580bdb30SBarry Smith 1986580bdb30SBarry Smith Note: 1987857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1988580bdb30SBarry Smith The arrays must be of the same type 1989580bdb30SBarry Smith 1990580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1991580bdb30SBarry Smith PetscArraymove() 1992580bdb30SBarry Smith M*/ 19939e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1994580bdb30SBarry Smith 19958f8f2f0dSBarry Smith /*MC 1996580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1997580bdb30SBarry Smith do not overlap 1998580bdb30SBarry Smith 1999580bdb30SBarry Smith Synopsis: 2000580bdb30SBarry Smith #include <petscsys.h> 2001580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 2002580bdb30SBarry Smith 2003580bdb30SBarry Smith Not Collective 2004580bdb30SBarry Smith 2005580bdb30SBarry Smith Input Parameters: 2006580bdb30SBarry Smith + str1 - First array 2007580bdb30SBarry Smith . str2 - Second array 2008580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 2009580bdb30SBarry Smith 2010580bdb30SBarry Smith Level: intermediate 2011580bdb30SBarry Smith 2012580bdb30SBarry Smith Note: 2013857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 2014580bdb30SBarry Smith The arrays must be of the same type 2015580bdb30SBarry Smith 2016580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 2017580bdb30SBarry Smith M*/ 20189e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 2019580bdb30SBarry Smith 20208f8f2f0dSBarry Smith /*MC 2021580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 2022580bdb30SBarry Smith 2023580bdb30SBarry Smith Synopsis: 2024580bdb30SBarry Smith #include <petscsys.h> 2025580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 2026580bdb30SBarry Smith 2027580bdb30SBarry Smith Not Collective 2028580bdb30SBarry Smith 2029580bdb30SBarry Smith Input Parameters: 2030de25709eSStefano Zampini + str1 - First array (destination) 2031de25709eSStefano Zampini . str2 - Second array (source) 2032580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 2033580bdb30SBarry Smith 2034580bdb30SBarry Smith Level: intermediate 2035580bdb30SBarry Smith 2036580bdb30SBarry Smith Note: 2037857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 2038580bdb30SBarry Smith The arrays must be of the same type 2039580bdb30SBarry Smith 2040580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 2041580bdb30SBarry Smith M*/ 20429e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 2043580bdb30SBarry Smith 20448f8f2f0dSBarry Smith /*MC 2045580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 2046580bdb30SBarry Smith 2047580bdb30SBarry Smith Synopsis: 2048580bdb30SBarry Smith #include <petscsys.h> 2049580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 2050580bdb30SBarry Smith 2051580bdb30SBarry Smith Not Collective 2052580bdb30SBarry Smith 2053580bdb30SBarry Smith Input Parameters: 2054580bdb30SBarry Smith + str1 - array 2055580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 2056580bdb30SBarry Smith 2057580bdb30SBarry Smith Level: intermediate 2058580bdb30SBarry Smith 2059580bdb30SBarry Smith Note: 2060857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 2061580bdb30SBarry Smith 2062580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 2063580bdb30SBarry Smith M*/ 20649e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 2065580bdb30SBarry Smith 2066d382aafbSBarry Smith /*MC 2067d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 2068d382aafbSBarry Smith 2069eca87e8dSBarry Smith Synopsis: 2070aaa7dc30SBarry Smith #include <petscsys.h> 2071eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 2072eca87e8dSBarry Smith 2073d382aafbSBarry Smith Not Collective 2074d382aafbSBarry Smith 2075d382aafbSBarry Smith Input Parameters: 2076d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 2077d382aafbSBarry Smith . n - number of elements to fetch 2078d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 207950d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2080d382aafbSBarry Smith 2081d382aafbSBarry Smith Level: developer 2082d382aafbSBarry Smith 2083d382aafbSBarry Smith Notes: 2084d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2085d382aafbSBarry Smith 208650d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 208750d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 208850d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 208963cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 209063cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 209163cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2092d382aafbSBarry Smith 2093d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2094d382aafbSBarry Smith address). 2095d382aafbSBarry Smith 2096d382aafbSBarry Smith M*/ 2097d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2098d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2099d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2100d382aafbSBarry Smith } while (0) 2101d382aafbSBarry Smith 2102d382aafbSBarry Smith /* 2103d382aafbSBarry Smith Determine if some of the kernel computation routines use 2104d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2105d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2106d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2107e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2108d382aafbSBarry Smith */ 2109d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2110d382aafbSBarry Smith 2111d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2112d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2113d382aafbSBarry Smith #endif 2114d382aafbSBarry Smith 21155a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 21165a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2117d382aafbSBarry Smith #endif 2118d382aafbSBarry Smith 2119d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2120d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2121d382aafbSBarry Smith #endif 2122d382aafbSBarry Smith 2123d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2124d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2125d382aafbSBarry Smith #endif 2126d382aafbSBarry Smith 2127d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2128d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2129d382aafbSBarry Smith #endif 2130d382aafbSBarry Smith 2131d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2132d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2133d382aafbSBarry Smith #endif 2134d382aafbSBarry Smith 2135d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2136d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2137d382aafbSBarry Smith #endif 2138d382aafbSBarry Smith 2139d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2140d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2141d382aafbSBarry Smith #endif 2142d382aafbSBarry Smith 2143d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2144d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2145d382aafbSBarry Smith #endif 2146d382aafbSBarry Smith 2147d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2148d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2149d382aafbSBarry Smith #endif 2150d382aafbSBarry Smith 2151d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2152d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2153d382aafbSBarry Smith #endif 2154d382aafbSBarry Smith 2155d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2156d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2157d382aafbSBarry Smith #endif 2158d382aafbSBarry Smith 2159d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2160d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2161d382aafbSBarry Smith #endif 2162d382aafbSBarry Smith 2163d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2164d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2165d382aafbSBarry Smith #endif 2166d382aafbSBarry Smith 2167d382aafbSBarry Smith #endif 2168d382aafbSBarry Smith 2169d382aafbSBarry Smith /* 2170d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2171d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2172d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2173d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2174d382aafbSBarry Smith ugly extern "C" {} wrappers. 2175d382aafbSBarry Smith */ 2176d382aafbSBarry Smith #if defined(__cplusplus) 2177d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2178d382aafbSBarry Smith # define EXTERN_C_END } 2179d382aafbSBarry Smith #else 2180d382aafbSBarry Smith # define EXTERN_C_BEGIN 2181d382aafbSBarry Smith # define EXTERN_C_END 2182d382aafbSBarry Smith #endif 2183d382aafbSBarry Smith 2184d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2185d382aafbSBarry Smith 2186d382aafbSBarry Smith /*MC 2187d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2188d382aafbSBarry Smith communication 2189d382aafbSBarry Smith 2190d382aafbSBarry Smith Level: beginner 2191d382aafbSBarry Smith 2192d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2193d382aafbSBarry Smith 2194d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2195d382aafbSBarry Smith M*/ 2196d382aafbSBarry Smith 2197d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2198014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2199014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2200c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2201c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2202c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2203c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2204d382aafbSBarry Smith #endif 2205d382aafbSBarry Smith 2206d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2207d382aafbSBarry Smith 2208d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2209d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2210d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2211d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2212d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2213d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2214eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 2215d382aafbSBarry Smith 221661b0d812SBarry Smith /*@C 2217c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2218c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2219c73702f5SBarry Smith 2220c73702f5SBarry Smith Not Collective 2221c73702f5SBarry Smith 2222c73702f5SBarry Smith Input Parameter: 2223c73702f5SBarry Smith . a - the PetscInt64 value 2224c73702f5SBarry Smith 2225c73702f5SBarry Smith Output Parameter: 2226c73702f5SBarry Smith . b - the resulting PetscInt value 2227c73702f5SBarry Smith 2228c73702f5SBarry Smith Level: advanced 2229c73702f5SBarry Smith 2230c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2231c73702f5SBarry Smith 2232c73702f5SBarry Smith Not available from Fortran 2233c73702f5SBarry Smith 223461778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2235c73702f5SBarry Smith @*/ 2236c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2237c73702f5SBarry Smith { 2238c73702f5SBarry Smith PetscFunctionBegin; 2239c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2240e9e21dffSJose E. Roman if (a > PETSC_MAX_INT) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); } 2241c73702f5SBarry Smith #endif 2242c73702f5SBarry Smith *b = (PetscInt)(a); 2243c73702f5SBarry Smith PetscFunctionReturn(0); 2244c73702f5SBarry Smith } 2245c73702f5SBarry Smith 2246c73702f5SBarry Smith /*@C 224761b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 224861b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 224961b0d812SBarry Smith 225061b0d812SBarry Smith Not Collective 225161b0d812SBarry Smith 225261b0d812SBarry Smith Input Parameter: 225361b0d812SBarry Smith . a - the PetscInt value 225461b0d812SBarry Smith 225561b0d812SBarry Smith Output Parameter: 225661b0d812SBarry Smith . b - the resulting PetscBLASInt value 225761b0d812SBarry Smith 225861b0d812SBarry Smith Level: advanced 225961b0d812SBarry Smith 22600bc7d38cSBarry Smith Notes: 22611fd49c25SBarry Smith Not available from Fortran 2262f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 22631fd49c25SBarry Smith 2264c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 226561b0d812SBarry Smith @*/ 2266c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2267c5df96a5SBarry Smith { 2268c5df96a5SBarry Smith PetscFunctionBegin; 2269c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2270e9e21dffSJose E. Roman if (a > PETSC_BLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running",a); } 2271c5df96a5SBarry Smith #endif 2272e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); } 2273c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2274c5df96a5SBarry Smith PetscFunctionReturn(0); 2275c5df96a5SBarry Smith } 2276c5df96a5SBarry Smith 227761b0d812SBarry Smith /*@C 2278eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2279eee0c0a6SToby Isaac 2280eee0c0a6SToby Isaac Not Collective 2281eee0c0a6SToby Isaac 2282eee0c0a6SToby Isaac Input Parameter: 2283eee0c0a6SToby Isaac . a - the PetscInt value 2284eee0c0a6SToby Isaac 2285eee0c0a6SToby Isaac Output Parameter: 2286eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2287eee0c0a6SToby Isaac 2288eee0c0a6SToby Isaac Level: advanced 2289eee0c0a6SToby Isaac 2290eee0c0a6SToby Isaac Notes: 2291eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2292eee0c0a6SToby Isaac 2293eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2294eee0c0a6SToby Isaac @*/ 2295ae77d22fSJunchao Zhang PETSC_STATIC_INLINE PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscCuBLASInt *b) 2296eee0c0a6SToby Isaac { 2297eee0c0a6SToby Isaac PetscFunctionBegin; 2298eee0c0a6SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 2299e9e21dffSJose E. Roman if (a > PETSC_CUBLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for cuBLAS, which is restricted to 32 bit integers.",a); } 2300eee0c0a6SToby Isaac #endif 2301e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); } 2302eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2303eee0c0a6SToby Isaac PetscFunctionReturn(0); 2304eee0c0a6SToby Isaac } 2305eee0c0a6SToby Isaac 2306eee0c0a6SToby Isaac /*@C 230761b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 230861b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 230961b0d812SBarry Smith 231061b0d812SBarry Smith Not Collective 231161b0d812SBarry Smith 231261b0d812SBarry Smith Input Parameter: 231361b0d812SBarry Smith . a - the PetscInt value 231461b0d812SBarry Smith 231561b0d812SBarry Smith Output Parameter: 231661b0d812SBarry Smith . b - the resulting PetscMPIInt value 231761b0d812SBarry Smith 231861b0d812SBarry Smith Level: advanced 231961b0d812SBarry Smith 23201fd49c25SBarry Smith Not available from Fortran 23211fd49c25SBarry Smith 2322c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 232361b0d812SBarry Smith @*/ 23244dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 23254dc2109aSBarry Smith { 23264dc2109aSBarry Smith PetscFunctionBegin; 23274dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2328e9e21dffSJose E. Roman if (a > PETSC_MPI_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for MPI buffer length. We currently only support 32 bit integers",a); } 23294dc2109aSBarry Smith #endif 2330c73702f5SBarry Smith *b = (PetscMPIInt)(a); 23314dc2109aSBarry Smith PetscFunctionReturn(0); 23324dc2109aSBarry Smith } 23334dc2109aSBarry Smith 2334bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 23352f18eb33SBarry Smith 23362f18eb33SBarry Smith /*@C 23372f18eb33SBarry Smith 23382f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 23392f18eb33SBarry Smith 23402f18eb33SBarry Smith Not Collective 23412f18eb33SBarry Smith 2342d8d19677SJose E. Roman Input Parameters: 23432f18eb33SBarry Smith + a - the PetscReal value 23442f18eb33SBarry Smith - b - the second value 23452f18eb33SBarry Smith 2346390e1bf2SBarry Smith Returns: 2347390e1bf2SBarry Smith the result as a PetscInt value 23482f18eb33SBarry Smith 2349bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23502f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 23512f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23522f18eb33SBarry Smith 2353e28ce29aSPatrick Sanan Developers Note: 2354e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23552f18eb33SBarry Smith 23562f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23572f18eb33SBarry Smith 23581fd49c25SBarry Smith Not available from Fortran 23591fd49c25SBarry Smith 23602f18eb33SBarry Smith Level: advanced 23612f18eb33SBarry Smith 236261778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23632f18eb33SBarry Smith @*/ 23642f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 23652f18eb33SBarry Smith { 2366bafee8b4SSatish Balay PetscInt64 r; 23672f18eb33SBarry Smith 2368bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 23692f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23702f18eb33SBarry Smith return (PetscInt) r; 23712f18eb33SBarry Smith } 23722f18eb33SBarry Smith 23732f18eb33SBarry Smith /*@C 23742f18eb33SBarry Smith 23752f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23762f18eb33SBarry Smith 23772f18eb33SBarry Smith Not Collective 23782f18eb33SBarry Smith 2379d8d19677SJose E. Roman Input Parameters: 23802f18eb33SBarry Smith + a - the PetscInt value 23812f18eb33SBarry Smith - b - the second value 23822f18eb33SBarry Smith 2383390e1bf2SBarry Smith Returns: 2384390e1bf2SBarry Smith the result as a PetscInt value 23852f18eb33SBarry Smith 2386bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23872f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23882f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23892f18eb33SBarry Smith 23901fd49c25SBarry Smith Not available from Fortran 23911fd49c25SBarry Smith 23922f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23932f18eb33SBarry Smith 23942f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23952f18eb33SBarry Smith 23962f18eb33SBarry Smith Level: advanced 23972f18eb33SBarry Smith 239861778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23992f18eb33SBarry Smith @*/ 24002f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 24012f18eb33SBarry Smith { 2402bafee8b4SSatish Balay PetscInt64 r; 24032f18eb33SBarry Smith 2404bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 24052f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 24062f18eb33SBarry Smith return (PetscInt) r; 24072f18eb33SBarry Smith } 24082f18eb33SBarry Smith 2409f91af8c7SBarry Smith /*@C 2410f91af8c7SBarry Smith 2411f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2412f91af8c7SBarry Smith 2413f91af8c7SBarry Smith Not Collective 2414f91af8c7SBarry Smith 2415d8d19677SJose E. Roman Input Parameters: 2416f91af8c7SBarry Smith + a - the PetscInt value 2417f91af8c7SBarry Smith - b - the second value 2418f91af8c7SBarry Smith 2419390e1bf2SBarry Smith Returns: 2420390e1bf2SBarry Smith the result as a PetscInt value 2421f91af8c7SBarry Smith 2422bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2423f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2424f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2425f91af8c7SBarry Smith 2426f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2427f91af8c7SBarry Smith 2428f5f57ec0SBarry Smith Not available from Fortran 2429f5f57ec0SBarry Smith 2430f91af8c7SBarry Smith Level: advanced 2431f91af8c7SBarry Smith 243261778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2433f91af8c7SBarry Smith @*/ 2434f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2435f91af8c7SBarry Smith { 2436bafee8b4SSatish Balay PetscInt64 r; 2437f91af8c7SBarry Smith 2438bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2439f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2440f91af8c7SBarry Smith return (PetscInt) r; 2441f91af8c7SBarry Smith } 2442f91af8c7SBarry Smith 24432f18eb33SBarry Smith /*@C 24442f18eb33SBarry Smith 24452f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 24462f18eb33SBarry Smith 24472f18eb33SBarry Smith Not Collective 24482f18eb33SBarry Smith 2449d8d19677SJose E. Roman Input Parameters: 24502f18eb33SBarry Smith + a - the PetscInt value 24512f18eb33SBarry Smith - b - the second value 24522f18eb33SBarry Smith 2453d8d19677SJose E. Roman Output Parameter: 2454390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 24552f18eb33SBarry Smith 2456bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 24572f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 24582f18eb33SBarry Smith 2459f5f57ec0SBarry Smith Not available from Fortran 2460f5f57ec0SBarry Smith 2461220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 24622f18eb33SBarry Smith 24632f18eb33SBarry Smith Level: advanced 24642f18eb33SBarry Smith 2465220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 24662f18eb33SBarry Smith @*/ 24672f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 24682f18eb33SBarry Smith { 2469bafee8b4SSatish Balay PetscInt64 r; 24702f18eb33SBarry Smith 24712f18eb33SBarry Smith PetscFunctionBegin; 2472bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 24732f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 247461778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 24752f18eb33SBarry Smith #endif 2476f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2477f91af8c7SBarry Smith PetscFunctionReturn(0); 2478f91af8c7SBarry Smith } 2479f91af8c7SBarry Smith 2480f91af8c7SBarry Smith /*@C 2481f91af8c7SBarry Smith 2482fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2483f91af8c7SBarry Smith 2484f91af8c7SBarry Smith Not Collective 2485f91af8c7SBarry Smith 2486d8d19677SJose E. Roman Input Parameters: 2487f91af8c7SBarry Smith + a - the PetscInt value 2488f91af8c7SBarry Smith - b - the second value 2489f91af8c7SBarry Smith 2490d8d19677SJose E. Roman Output Parameter: 2491390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2492f91af8c7SBarry Smith 2493bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2494f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2495f91af8c7SBarry Smith 2496f5f57ec0SBarry Smith Not available from Fortran 2497f5f57ec0SBarry Smith 2498f91af8c7SBarry Smith Level: advanced 2499f91af8c7SBarry Smith 250061778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2501f91af8c7SBarry Smith @*/ 2502f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2503f91af8c7SBarry Smith { 2504bafee8b4SSatish Balay PetscInt64 r; 2505f91af8c7SBarry Smith 2506f91af8c7SBarry Smith PetscFunctionBegin; 2507bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2508f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 250961778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2510f91af8c7SBarry Smith #endif 2511f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 25122f18eb33SBarry Smith PetscFunctionReturn(0); 25132f18eb33SBarry Smith } 2514c5df96a5SBarry Smith 2515d382aafbSBarry Smith /* 25162981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2517d382aafbSBarry Smith */ 2518d382aafbSBarry Smith #if defined(hz) 2519d382aafbSBarry Smith # undef hz 2520d382aafbSBarry Smith #endif 2521d382aafbSBarry Smith 252215a5570dSLisandro Dalcin #include <limits.h> 252315a5570dSLisandro Dalcin 252415a5570dSLisandro Dalcin /* The number of bits in a byte */ 252515a5570dSLisandro Dalcin 252615a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 252715a5570dSLisandro Dalcin 2528d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2529d382aafbSBarry Smith # include <sys/types.h> 2530d382aafbSBarry Smith #endif 2531d382aafbSBarry Smith 2532d382aafbSBarry Smith /*MC 2533d382aafbSBarry Smith 253466d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 253566d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 253666d79e26SBarry Smith 253766d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 253866d79e26SBarry Smith 253966d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 254066d79e26SBarry Smith 254166d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 254266d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 254366d79e26SBarry Smith 254466d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 254566d79e26SBarry Smith 254666d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 254766d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 254866d79e26SBarry Smith version number (x.y.z). 254966d79e26SBarry Smith 255066d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 255166d79e26SBarry Smith 255266d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 255366d79e26SBarry Smith 255466d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 255566d79e26SBarry Smith 255666d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 255766d79e26SBarry Smith 2558cbc12506SBarry Smith PETSC_VERSION_() is deprecated and will eventually be removed. 255966d79e26SBarry Smith 2560cbc12506SBarry Smith Level: intermediate 256166d79e26SBarry Smith 256266d79e26SBarry Smith M*/ 256366d79e26SBarry Smith 2564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2565014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 257027710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 25715f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2572d382aafbSBarry Smith 25736a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 25746a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 25756a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2577ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 257822ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2580f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 258160e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2582d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2585014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 25866c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 258717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 258817d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25905569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 259217df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 259439f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2596745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 259739f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 26016c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 26026c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2603e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2604ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2605ce605777SToby Isaac 26064d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2607676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2608676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2609676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 26104d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2611676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2612676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2613676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2614676f2a66SJacob Faibussowitsch 2615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2617d382aafbSBarry Smith 261876bdecfbSBarry Smith /*J 2619d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2620d382aafbSBarry Smith 2621d382aafbSBarry Smith Level: beginner 2622d382aafbSBarry Smith 2623e28ce29aSPatrick Sanan Notes: 2624e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 262525ccb61fSToby Isaac with the option --download-sprng or --download-random123 2626d382aafbSBarry Smith 26278f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 262876bdecfbSBarry Smith J*/ 262919fd82e9SBarry Smith typedef const char* PetscRandomType; 2630d382aafbSBarry Smith #define PETSCRAND "rand" 2631d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2632d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2633c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 263425ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2635808ba619SStefano Zampini #define PETSCCURAND "curand" 2636d382aafbSBarry Smith 2637d382aafbSBarry Smith /* Logging support */ 2638014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2639d382aafbSBarry Smith 2640607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2641d382aafbSBarry Smith 2642d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2643140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2644d382aafbSBarry Smith 2645bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 264619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 264819fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2649fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2651d382aafbSBarry Smith 2652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2655808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2656808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2660014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2662014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2663d382aafbSBarry Smith 2664014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2665014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2666014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2667014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2668014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2669014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2670014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 267197540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 26728a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 267397540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2674d382aafbSBarry Smith 267530815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 267630815ce0SLisandro Dalcin 26779860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 26789860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2679f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2680f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2686014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2687014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2688c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2689e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2690c891a504SStefano Zampini #endif 2691d382aafbSBarry Smith 2692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2693014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2694014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2695d382aafbSBarry Smith 2696014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2697014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2698014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2699014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2700014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2701014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 27022a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2703d382aafbSBarry Smith 2704014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2705014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2706014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2707014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2708014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2709cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2710cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2711d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2712d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2713d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2714d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 27156afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 27166afbe7ddSJed Brown MPI_Request**,MPI_Request**, 27176afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 27186afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 27196afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2720d382aafbSBarry Smith 27216145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 27226145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 27236145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 27246145cd65SJed Brown 2725014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2726d382aafbSBarry Smith 2727ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2728ce94432eSBarry Smith 272945487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 273045487dadSJed Brown 2731d382aafbSBarry Smith struct _n_PetscSubcomm { 2732d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2733d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2734306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 273545487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 273645487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2737708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 273845487dadSJed Brown PetscSubcommType type; 2739e5acf8a4SHong Zhang char *subcommprefix; 2740d382aafbSBarry Smith }; 2741d382aafbSBarry Smith 2742c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2743306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 274436be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2745014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2746014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2747014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2748014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 274965d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2750053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2751f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2752e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2753a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2754a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2755a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2756d382aafbSBarry Smith 27579962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 27589962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 27599962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 27609962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 27619962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 27629962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 27639962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 27649962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 27659962606eSBarry Smith 27665e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 27675f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 27685f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27695f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27705f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 27715e71baefSBarry Smith 2772a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2773a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2774a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2775a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2776a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2777a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2778a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2779a32e93adSJunchao Zhang 278013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 27810f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 278213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2783137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2784137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2785137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 278613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 278713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 27880f453b92SJed Brown 2789471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2790471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2791471ecdacSJed Brown * possible. */ 27926a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2793d382aafbSBarry Smith 27949de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27959de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27969de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27979de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27989de0f6ecSBarry Smith 2799ace2fbaeSBarry Smith #include <stdarg.h> 2800ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2801ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2802ace2fbaeSBarry Smith 2803268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2804fbfcfee5SBarry Smith 28051f817a21SBarry Smith /*@C 28061f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 28071f817a21SBarry Smith 28081f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 28091f817a21SBarry Smith 28101f817a21SBarry Smith Input Parameters: 28111f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 28121f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 28131f817a21SBarry Smith 2814850545d0SSatish Balay Level: intermediate 2815850545d0SSatish Balay 2816f5f57ec0SBarry Smith Not available from Fortran 2817f5f57ec0SBarry Smith 28181f817a21SBarry Smith Options Database: 2819063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 28201f817a21SBarry Smith @*/ 2821dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2822dff31646SBarry Smith { 2823dff31646SBarry Smith size_t len; 2824dff31646SBarry Smith char *vstring; 2825dff31646SBarry Smith PetscErrorCode ierr; 2826dff31646SBarry Smith 28271f817a21SBarry Smith PetscFunctionBegin; 28288d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2829dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 283035005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2831580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2832dff31646SBarry Smith if (set) *set = PETSC_TRUE; 28331f817a21SBarry Smith PetscFunctionReturn(0); 2834dff31646SBarry Smith } 2835dff31646SBarry Smith 2836b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2837fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2838fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2839f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2840fe278a28SBarry Smith 2841f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2842f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2843b967cddfSBarry Smith 28449f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 28459f4d3c52SBarry Smith 284604102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2847763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2848dff31646SBarry Smith 284968e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 28505dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2851d382aafbSBarry Smith 2852b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2853503e1a2cSLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscStrHash(const char *str) 2854df05ca09SBarry Smith { 2855df05ca09SBarry Smith unsigned int c,hash = 5381; 2856df05ca09SBarry Smith 2857503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2858df05ca09SBarry Smith return hash; 2859df05ca09SBarry Smith } 286077a5e07dSBarry Smith 286177a5e07dSBarry Smith /*MC 286277a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 286377a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 286477a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 286577a5e07dSBarry Smith 2866d083f849SBarry Smith Collective 286777a5e07dSBarry Smith 286877a5e07dSBarry Smith Synopsis: 286977a5e07dSBarry Smith #include <petscsys.h> 287077a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 287177a5e07dSBarry Smith 287277a5e07dSBarry Smith Input Parameters: 2873df05ca09SBarry Smith + a - pointer to the input data to be reduced 2874df05ca09SBarry Smith . c - the number of MPI data items in a and b 2875df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2876df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2877df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 287877a5e07dSBarry Smith 287977a5e07dSBarry Smith Output Parameter: 2880df05ca09SBarry Smith . b - the reduced values 288177a5e07dSBarry Smith 2882e28ce29aSPatrick Sanan Notes: 2883e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 288477a5e07dSBarry Smith 2885df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2886df05ca09SBarry Smith 2887df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2888df05ca09SBarry Smith 288977a5e07dSBarry Smith Level: developer 289077a5e07dSBarry Smith 289177a5e07dSBarry Smith .seealso: MPI_Allreduce() 289277a5e07dSBarry Smith M*/ 2893df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do {\ 2894df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2895df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6];\ 2896df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2897df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2898df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2899df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 2900df05ca09SBarry Smith if (-a_b2[0] != a_b2[1]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 2901df05ca09SBarry Smith if (-a_b2[2] != a_b2[3]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 2902df05ca09SBarry Smith if (-a_b2[4] != a_b2[5]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",c);\ 2903df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2904df05ca09SBarry Smith } while (0) 2905b2566f29SBarry Smith #else 2906df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2907b2566f29SBarry Smith #endif 2908b2566f29SBarry Smith 2909b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 29108198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 29118198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 29122f065d89SBarry Smith #endif 29138198064fSBarry Smith 2914cd88fca5SStefano Zampini /* this is a vile hack */ 2915cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 2916961fb248SStefano Zampini #if !defined(PETSC_NECMPI_VERSION_MAJOR) || \ 2917961fb248SStefano Zampini !defined(PETSC_NECMPI_VERSION_MINOR) || \ 2918961fb248SStefano Zampini PETSC_NECMPI_VERSION_MAJOR < 2 || \ 2919961fb248SStefano Zampini (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2920cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0); 2921cd88fca5SStefano Zampini #endif 2922961fb248SStefano Zampini #endif 2923cd88fca5SStefano Zampini 292412801b39SBarry Smith /* 292560fbe2beSVaclav Hapla List of external packages and queries on it 292660fbe2beSVaclav Hapla */ 292760fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 292860fbe2beSVaclav Hapla 2929d382aafbSBarry Smith #endif 2930