1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith #endif 25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith #define _BSD_SOURCE 2773fca5a0SBarry Smith #endif 2807f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay #define _DEFAULT_SOURCE 3007f00807SSatish Balay #endif 31ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar #define _GNU_SOURCE 33ea0fecefSShri Abhyankar #endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36d382aafbSBarry Smith /* ========================================================================== */ 37d382aafbSBarry Smith /* 382c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 39d382aafbSBarry Smith */ 401ec50b02SJed Brown #if defined(__cplusplus) 411ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 421ec50b02SJed Brown #else 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 441ec50b02SJed Brown #endif 45d382aafbSBarry Smith 46c5e4d11fSDmitry Karpeev /* ========================================================================== */ 47c5e4d11fSDmitry Karpeev /* 48c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 491cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 501cc8b206SBarry Smith file within an extern "C". 51c5e4d11fSDmitry Karpeev */ 52c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 53c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 54c5e4d11fSDmitry Karpeev #endif 55c5e4d11fSDmitry Karpeev 56ed938b00SJed Brown #if defined(__cplusplus) 57ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 58ed938b00SJed Brown #else 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 60ed938b00SJed Brown #endif 61ed938b00SJed Brown 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_STATIC_INLINE PETSC_CXX_STATIC_INLINE 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_STATIC_INLINE PETSC_C_STATIC_INLINE 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 69014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 70014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7226703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7326703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7426703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7526703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 77014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 78014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 80d382aafbSBarry Smith #else 81014dd563SJed Brown # define PETSC_DLLEXPORT 82014dd563SJed Brown # define PETSC_DLLIMPORT 8321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 84014dd563SJed Brown #endif 85014dd563SJed Brown 86014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 87014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 88014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 89014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 90014dd563SJed Brown #endif 91014dd563SJed Brown 921cc8b206SBarry Smith /* 931cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 941cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 951cc8b206SBarry Smith used from C and are always visible in the shared libraries 961cc8b206SBarry Smith */ 972c280183SJed Brown #if defined(__cplusplus) 98014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 99638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C" 10021f66b81SJed Brown #define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 101014dd563SJed Brown #else 102014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 103638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF 1046258c452SJed Brown #define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 105d382aafbSBarry Smith #endif 10627710113SBarry Smith 1072c8e378dSBarry Smith #include <petscversion.h> 108301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 109d382aafbSBarry Smith 110d382aafbSBarry Smith /* ========================================================================== */ 111d382aafbSBarry Smith 112d382aafbSBarry Smith /* 113d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 114d382aafbSBarry Smith 115d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 116d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 117d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 118d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 119d382aafbSBarry Smith mpicxx.h directly in their code 120d382aafbSBarry Smith */ 121fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 122d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 123fa9e63e2SJed Brown #endif 124fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 125d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 126fa9e63e2SJed Brown #endif 127076e11b5SSatish Balay #if !defined(OMPI_WANT_MPI_INTERFACE_WARNING) 128076e11b5SSatish Balay # define OMPI_WANT_MPI_INTERFACE_WARNING 0 129076e11b5SSatish Balay #endif 1302c8e378dSBarry Smith #include <mpi.h> 13165013866SBarry Smith 132d382aafbSBarry Smith /* 133a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 134a7886beaSBarry Smith This usually happens because 135a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 136a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 137a7886beaSBarry Smith */ 138a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 139a7886beaSBarry Smith # if !defined(__MPIUNI_H) 140a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 141a7886beaSBarry Smith # endif 142a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 143a7886beaSBarry Smith # if !defined(MPICH_NUMVERSION) 144a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 145a7886beaSBarry Smith # elif MPICH_NUMVERSION != PETSC_HAVE_MPICH_NUMVERSION 146a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 147a7886beaSBarry Smith # endif 148a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 149a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 150a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 151c3ac57cfSSatish Balay # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION != PETSC_HAVE_OMPI_RELEASE_VERSION) 152c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 153a7886beaSBarry Smith # endif 154a7886beaSBarry Smith #endif 155a7886beaSBarry Smith 156a7886beaSBarry Smith /* 1572981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 158d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 159d382aafbSBarry Smith */ 160d382aafbSBarry Smith #include <stdio.h> 161d382aafbSBarry Smith 162d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 163d382aafbSBarry Smith #if !defined(MPIAPI) 164d382aafbSBarry Smith #define MPIAPI 165d382aafbSBarry Smith #endif 166d382aafbSBarry Smith 1671cc8b206SBarry Smith /* 1681cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1691cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1701cc8b206SBarry Smith does not match the actual type of the argument being passed in 1711cc8b206SBarry Smith */ 172c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 173894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 174894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1758ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1768ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 177894dd566SJed Brown # endif 178894dd566SJed Brown #endif 179894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 180894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 1818ad47952SJed Brown # define PetscAttrMPITypeTag(type) 1828ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 183894dd566SJed Brown #endif 184b3506946SBarry Smith 185d382aafbSBarry Smith /*MC 1861957e957SBarry Smith PetscErrorCode - datatype used for return error code from almost all PETSc functions 187d382aafbSBarry Smith 188d382aafbSBarry Smith Level: beginner 189d382aafbSBarry Smith 190d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 191d382aafbSBarry Smith M*/ 192d382aafbSBarry Smith typedef int PetscErrorCode; 193d382aafbSBarry Smith 194d382aafbSBarry Smith /*MC 195d382aafbSBarry Smith 196503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 197d382aafbSBarry Smith 1981957e957SBarry Smith Notes: Use PetscClassIdRegister() to obtain a new value for a new class being created. Usually 1991957e957SBarry Smith XXXInitializePackage() calls it for each class it defines. 2001957e957SBarry Smith 2011957e957SBarry Smith Developer Notes: Internal integer stored in the _p_PetscObject data structure. 2021957e957SBarry Smith These are all computed by an offset from the lowest one, PETSC_SMALLEST_CLASSID. 2031957e957SBarry Smith 2041957e957SBarry Smith Level: developer 205d382aafbSBarry Smith 2060700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 207d382aafbSBarry Smith M*/ 2080700a824SBarry Smith typedef int PetscClassId; 209d382aafbSBarry Smith 210d382aafbSBarry Smith 211d382aafbSBarry Smith /*MC 212d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 213d382aafbSBarry Smith 214d382aafbSBarry Smith Level: intermediate 215d382aafbSBarry Smith 216d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 2173b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 218d382aafbSBarry Smith 2194dc2109aSBarry Smith PetscMPIIntCast(a,&b) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 2202981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error. 221d382aafbSBarry Smith 2221cc8b206SBarry Smith .seealso: PetscBLASInt, PetscInt, PetscMPIIntCast() 223d382aafbSBarry Smith 224d382aafbSBarry Smith M*/ 225d382aafbSBarry Smith typedef int PetscMPIInt; 226d382aafbSBarry Smith 227d382aafbSBarry Smith /*MC 228d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 229d382aafbSBarry Smith 230d382aafbSBarry Smith Level: intermediate 231d382aafbSBarry Smith 232d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 233d382aafbSBarry Smith M*/ 234d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 2355a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 236d382aafbSBarry Smith 237fab38c73SJed Brown #if defined(PETSC_HAVE_STDINT_H) 238fab38c73SJed Brown #include <stdint.h> 239fab38c73SJed Brown #endif 240a05e1a72SSatish Balay #if defined (PETSC_HAVE_INTTYPES_H) 241a05e1a72SSatish Balay #include <inttypes.h> 242*37354ed4SSatish Balay # if !defined(PRId64) 243*37354ed4SSatish Balay # define PRId64 "ld" 244*37354ed4SSatish Balay # endif 245a05e1a72SSatish Balay #endif 246fab38c73SJed Brown 247d382aafbSBarry Smith /*MC 248d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 2493b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 250d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 251d382aafbSBarry Smith 252d382aafbSBarry Smith Level: intermediate 253d382aafbSBarry Smith 254d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 255d382aafbSBarry Smith M*/ 256*37354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 257fab38c73SJed Brown typedef int64_t Petsc64bitInt; 258bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 259a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 260fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 261f505b413SSatish Balay typedef long long Petsc64bitInt; 262bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 263a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 264f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 265236ed0a3SSatish Balay typedef __int64 Petsc64bitInt; 266bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 267a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 268236ed0a3SSatish Balay #else 269bd84f1cfSSatish Balay #error "cannot determine Petsc64bitInt type" 270236ed0a3SSatish Balay #endif 271d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 272236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt; 273bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64 274a05e1a72SSatish Balay #define PetscInt_FMT PetscInt64_FMT 275d382aafbSBarry Smith #else 276d382aafbSBarry Smith typedef int PetscInt; 277d382aafbSBarry Smith #define MPIU_INT MPI_INT 278a05e1a72SSatish Balay #define PetscInt_FMT "d" 279d382aafbSBarry Smith #endif 280d382aafbSBarry Smith 281702bc34aSSatish Balay /*MC 282702bc34aSSatish Balay PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 283702bc34aSSatish Balay 284702bc34aSSatish Balay Level: intermediate 285702bc34aSSatish Balay 286702bc34aSSatish Balay Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 287702bc34aSSatish Balay standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 288702bc34aSSatish Balay (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below). 289702bc34aSSatish Balay 290c5df96a5SBarry Smith PetscErrorCode PetscBLASIntCast(a,&b) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2912981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error 292702bc34aSSatish Balay 2932981ebdbSBarry Smith Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc, 294702bc34aSSatish Balay if you run ./configure with the option 295702bc34aSSatish Balay --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib] 2962981ebdbSBarry Smith but you need to also use --known-64-bit-blas-indices. 2972981ebdbSBarry Smith 2982981ebdbSBarry Smith MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices 2992981ebdbSBarry Smith 3002981ebdbSBarry Smith Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK. 301702bc34aSSatish Balay 302702bc34aSSatish Balay External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot 303702bc34aSSatish Balay be used with PETSc if you have set PetscBLASInt to long int. 304702bc34aSSatish Balay 3051cc8b206SBarry Smith .seealso: PetscMPIInt, PetscInt, PetscBLASIntCast() 306702bc34aSSatish Balay 307702bc34aSSatish Balay M*/ 308702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES) 309702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt; 310702bc34aSSatish Balay #else 311702bc34aSSatish Balay typedef int PetscBLASInt; 312702bc34aSSatish Balay #endif 313702bc34aSSatish Balay 31458b60935SBarry Smith /*EC 31558b60935SBarry Smith 3162981ebdbSBarry Smith PetscPrecision - indicates what precision the object is using. This is currently not used. 31758b60935SBarry Smith 31858b60935SBarry Smith Level: advanced 31958b60935SBarry Smith 32058b60935SBarry Smith .seealso: PetscObjectSetPrecision() 32158b60935SBarry Smith E*/ 32258b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision; 323014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[]; 32458b60935SBarry Smith 325503cfb0cSBarry Smith /* 326503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 327503cfb0cSBarry Smith */ 328d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 329adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED 330d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 331adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG 332d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 333adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG 334d382aafbSBarry Smith #else 335d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 336d382aafbSBarry Smith #endif 337d382aafbSBarry Smith 338d382aafbSBarry Smith /* 339d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 340d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 341d382aafbSBarry Smith */ 342014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 343d382aafbSBarry Smith 344d382aafbSBarry Smith /* 345d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 346d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 347d382aafbSBarry Smith */ 348014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 349d382aafbSBarry Smith 350d382aafbSBarry Smith /*MC 351d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 352d382aafbSBarry Smith 353d382aafbSBarry Smith Synopsis: 354aaa7dc30SBarry Smith #include <petscsys.h> 355ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 356d382aafbSBarry Smith 357eca87e8dSBarry Smith Not Collective 358eca87e8dSBarry Smith 359d382aafbSBarry Smith Input Parameters: 360d382aafbSBarry Smith . cond - condition or expression 361d382aafbSBarry Smith 362d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 363d382aafbSBarry Smith branch is unlikely. 364d382aafbSBarry Smith 365d382aafbSBarry Smith Level: advanced 366d382aafbSBarry Smith 367d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 368d382aafbSBarry Smith M*/ 369d382aafbSBarry Smith 370d382aafbSBarry Smith /*MC 371d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 372d382aafbSBarry Smith 373d382aafbSBarry Smith Synopsis: 374aaa7dc30SBarry Smith #include <petscsys.h> 375ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 376d382aafbSBarry Smith 377eca87e8dSBarry Smith Not Collective 378eca87e8dSBarry Smith 379d382aafbSBarry Smith Input Parameters: 380d382aafbSBarry Smith . cond - condition or expression 381d382aafbSBarry Smith 382d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 383d382aafbSBarry Smith branch is likely. 384d382aafbSBarry Smith 385d382aafbSBarry Smith Level: advanced 386d382aafbSBarry Smith 387d382aafbSBarry Smith .seealso: PetscUnlikely() 388d382aafbSBarry Smith M*/ 389d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 390d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 391d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 392d382aafbSBarry Smith #else 393cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 394cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 395d382aafbSBarry Smith #endif 396d382aafbSBarry Smith 397d382aafbSBarry Smith /* 398d382aafbSBarry Smith Declare extern C stuff after including external header files 399d382aafbSBarry Smith */ 400d382aafbSBarry Smith 401d382aafbSBarry Smith 402d382aafbSBarry Smith /* 403d382aafbSBarry Smith Basic PETSc constants 404d382aafbSBarry Smith */ 405d382aafbSBarry Smith 406d382aafbSBarry Smith /*E 407ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 408d382aafbSBarry Smith 409d382aafbSBarry Smith Level: beginner 410d382aafbSBarry Smith 411ace3abfcSBarry Smith Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 41234e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 41334e82e7dSBarry Smith 4141cc8b206SBarry Smith .seealso: PETSC_TRUE, PETSC_FALSE, PetscNot() 415d382aafbSBarry Smith E*/ 416ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 4176a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 4185a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 41970b3c8c7SBarry Smith 4208b49ba18SBarry Smith /* 4218b49ba18SBarry Smith Defines some elementary mathematics functions and constants. 4228b49ba18SBarry Smith */ 4238b49ba18SBarry Smith #include <petscmath.h> 4248b49ba18SBarry Smith 42570b3c8c7SBarry Smith /*E 42670b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 42770b3c8c7SBarry Smith 42870b3c8c7SBarry Smith Level: beginner 42970b3c8c7SBarry Smith 43070b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 43170b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 43270b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 43370b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 43470b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 43570b3c8c7SBarry Smith 43670b3c8c7SBarry Smith E*/ 43770b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 4386a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 439d382aafbSBarry Smith 440d382aafbSBarry Smith /*MC 441ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 442d382aafbSBarry Smith 443d382aafbSBarry Smith Level: beginner 444d382aafbSBarry Smith 445d382aafbSBarry Smith Note: Zero integer 446d382aafbSBarry Smith 447ace3abfcSBarry Smith .seealso: PetscBool, PETSC_TRUE 448d382aafbSBarry Smith M*/ 449d382aafbSBarry Smith 450d382aafbSBarry Smith /*MC 451ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 452d382aafbSBarry Smith 453d382aafbSBarry Smith Level: beginner 454d382aafbSBarry Smith 455d382aafbSBarry Smith Note: Nonzero integer 456d382aafbSBarry Smith 457ace3abfcSBarry Smith .seealso: PetscBool, PETSC_FALSE 458d382aafbSBarry Smith M*/ 459d382aafbSBarry Smith 460d382aafbSBarry Smith /*MC 4610298fd71SBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer. This is deprecated in C/C++ simply use NULL 462d382aafbSBarry Smith 463d382aafbSBarry Smith Level: beginner 464d382aafbSBarry Smith 465d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 466d382aafbSBarry Smith some default 467d382aafbSBarry Smith 468d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 469503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 470d382aafbSBarry Smith 471d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 472d382aafbSBarry Smith 473d382aafbSBarry Smith M*/ 4743bcbec90SJed Brown #define PETSC_NULL NULL 475d382aafbSBarry Smith 476d382aafbSBarry Smith /*MC 4770298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 478d382aafbSBarry Smith 479d382aafbSBarry Smith Level: beginner 480d382aafbSBarry Smith 481d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 482d382aafbSBarry Smith some default 483d382aafbSBarry Smith 484d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 485d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 486d382aafbSBarry Smith 487d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 488d382aafbSBarry Smith 489d382aafbSBarry Smith M*/ 4900298fd71SBarry Smith #define PETSC_IGNORE NULL 491d382aafbSBarry Smith 492d382aafbSBarry Smith /*MC 493557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 494557d4da8SBarry Smith where you wish PETSc to use the default. 495557d4da8SBarry Smith 496557d4da8SBarry Smith Level: beginner 497557d4da8SBarry Smith 498557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 499557d4da8SBarry Smith 500557d4da8SBarry Smith M*/ 501557d4da8SBarry Smith #define PETSC_DECIDE -1 502557d4da8SBarry Smith 503557d4da8SBarry Smith /*MC 504d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 505d382aafbSBarry Smith where you wish PETSc to compute the required value. 506d382aafbSBarry Smith 507d382aafbSBarry Smith Level: beginner 508d382aafbSBarry Smith 509557d4da8SBarry Smith Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 510557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 511557d4da8SBarry Smith 5120298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 513d382aafbSBarry Smith 514d382aafbSBarry Smith M*/ 515d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 516d382aafbSBarry Smith 517d382aafbSBarry Smith /*MC 518557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 519557d4da8SBarry Smith where you wish PETSc to use the default. 520557d4da8SBarry Smith 521557d4da8SBarry Smith Level: beginner 522557d4da8SBarry Smith 5232d80014bSBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 524557d4da8SBarry Smith 5250298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 526557d4da8SBarry Smith 527557d4da8SBarry Smith M*/ 528557d4da8SBarry Smith #define PETSC_DEFAULT -2 529557d4da8SBarry Smith 530557d4da8SBarry Smith /*MC 531d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 532d382aafbSBarry Smith all the processs that PETSc knows about. 533d382aafbSBarry Smith 534d382aafbSBarry Smith Level: beginner 535d382aafbSBarry Smith 536d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 537d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 538d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 539a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 540a990b902SBarry Smith 541a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 542a990b902SBarry Smith is called because it may not have a valid value yet. 543d382aafbSBarry Smith 544d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 545d382aafbSBarry Smith 546d382aafbSBarry Smith M*/ 547014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 548d382aafbSBarry Smith 549d382aafbSBarry Smith /*MC 550503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 551d382aafbSBarry Smith 552d382aafbSBarry Smith Level: beginner 553d382aafbSBarry Smith 554a990b902SBarry Smith Notes: Do not USE/access or set this variable before PetscInitialize() has been called. 555a990b902SBarry Smith 556d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 557d382aafbSBarry Smith 558d382aafbSBarry Smith M*/ 559d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 560d382aafbSBarry Smith 561d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 562014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 563014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 564014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize; 5654cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 56682f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 567d382aafbSBarry Smith 568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 571d382aafbSBarry Smith 572d382aafbSBarry Smith /*MC 573854ce69bSBarry Smith PetscMalloc - Allocates memory, One should use PetscMalloc1() or PetscCalloc1() usually instead of this 574d382aafbSBarry Smith 575eca87e8dSBarry Smith Synopsis: 576aaa7dc30SBarry Smith #include <petscsys.h> 577eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 578eca87e8dSBarry Smith 579eca87e8dSBarry Smith Not Collective 580eca87e8dSBarry Smith 581d382aafbSBarry Smith Input Parameter: 582d382aafbSBarry Smith . m - number of bytes to allocate 583d382aafbSBarry Smith 584d382aafbSBarry Smith Output Parameter: 585d382aafbSBarry Smith . result - memory allocated 586d382aafbSBarry Smith 587d382aafbSBarry Smith Level: beginner 588d382aafbSBarry Smith 58949d7da52SJed Brown Notes: 59049d7da52SJed Brown Memory is always allocated at least double aligned 591d382aafbSBarry Smith 59249d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 593d382aafbSBarry Smith 594d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 595d382aafbSBarry Smith 596d382aafbSBarry Smith Concepts: memory allocation 597d382aafbSBarry Smith 598d382aafbSBarry Smith M*/ 59949d7da52SJed Brown #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 600d382aafbSBarry Smith 601d382aafbSBarry Smith /*MC 602503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 603d382aafbSBarry Smith 604d382aafbSBarry Smith Synopsis: 605aaa7dc30SBarry Smith #include <petscsys.h> 606d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 607d382aafbSBarry Smith 608eca87e8dSBarry Smith Not Collective 609eca87e8dSBarry Smith 610eca87e8dSBarry Smith Input Parameters: 611eca87e8dSBarry Smith . addr - address to align (any pointer type) 612eca87e8dSBarry Smith 613d382aafbSBarry Smith Level: developer 614d382aafbSBarry Smith 615d382aafbSBarry Smith .seealso: PetscMallocAlign() 616d382aafbSBarry Smith 617d382aafbSBarry Smith Concepts: memory allocation 618d382aafbSBarry Smith M*/ 619d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 620d382aafbSBarry Smith 621d382aafbSBarry Smith /*MC 622785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 623d382aafbSBarry Smith 624eca87e8dSBarry Smith Synopsis: 625aaa7dc30SBarry Smith #include <petscsys.h> 626785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 627785e854fSJed Brown 628785e854fSJed Brown Not Collective 629785e854fSJed Brown 630785e854fSJed Brown Input Parameter: 631785e854fSJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 632785e854fSJed Brown 633785e854fSJed Brown Output Parameter: 634785e854fSJed Brown . r1 - memory allocated in first chunk 635785e854fSJed Brown 636785e854fSJed Brown Level: developer 637785e854fSJed Brown 6381795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 639785e854fSJed Brown 640785e854fSJed Brown Concepts: memory allocation 641785e854fSJed Brown 642785e854fSJed Brown M*/ 643f0ba7cfcSLisandro Dalcin #define PetscMalloc1(m1,r1) PetscMalloc((m1)*sizeof(**(r1)),r1) 644785e854fSJed Brown 645785e854fSJed Brown /*MC 6461795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6471795a4d1SJed Brown 6481795a4d1SJed Brown Synopsis: 649aaa7dc30SBarry Smith #include <petscsys.h> 6501795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6511795a4d1SJed Brown 6521795a4d1SJed Brown Not Collective 6531795a4d1SJed Brown 6541795a4d1SJed Brown Input Parameter: 6551795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6561795a4d1SJed Brown 6571795a4d1SJed Brown Output Parameter: 6581795a4d1SJed Brown . r1 - memory allocated in first chunk 6591795a4d1SJed Brown 6601795a4d1SJed Brown Level: developer 6611795a4d1SJed Brown 6621795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6631795a4d1SJed Brown 6641795a4d1SJed Brown Concepts: memory allocation 6651795a4d1SJed Brown 6661795a4d1SJed Brown M*/ 6671795a4d1SJed Brown #define PetscCalloc1(m1,r1) (PetscMalloc1((m1),r1) || PetscMemzero(*(r1),(m1)*sizeof(**(r1)))) 6681795a4d1SJed Brown 6691795a4d1SJed Brown /*MC 670dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 671d382aafbSBarry Smith 672eca87e8dSBarry Smith Synopsis: 673aaa7dc30SBarry Smith #include <petscsys.h> 674dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 675eca87e8dSBarry Smith 676eca87e8dSBarry Smith Not Collective 677eca87e8dSBarry Smith 678d382aafbSBarry Smith Input Parameter: 679d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 680dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 681d382aafbSBarry Smith 682d382aafbSBarry Smith Output Parameter: 683d382aafbSBarry Smith + r1 - memory allocated in first chunk 684d382aafbSBarry Smith - r2 - memory allocated in second chunk 685d382aafbSBarry Smith 686d382aafbSBarry Smith Level: developer 687d382aafbSBarry Smith 6881795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 689d382aafbSBarry Smith 690d382aafbSBarry Smith Concepts: memory allocation 691d382aafbSBarry Smith 692d382aafbSBarry Smith M*/ 69320a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 6941d2f33c5SMatthew G. Knepley #define PetscMalloc2(m1,r1,m2,r2) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2))) 695d382aafbSBarry Smith #else 696ceba6b73SMatthew G. Knepley #define PetscMalloc2(m1,r1,m2,r2) ((((m1)+(m2)) ? (*(r2) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(PETSC_MEMALIGN-1),r1)) : 0) \ 697ceba6b73SMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),0) \ 6983589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0)) 699d382aafbSBarry Smith #endif 700d382aafbSBarry Smith 701d382aafbSBarry Smith /*MC 7021795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 703d382aafbSBarry Smith 704eca87e8dSBarry Smith Synopsis: 705aaa7dc30SBarry Smith #include <petscsys.h> 7061795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 707eca87e8dSBarry Smith 708eca87e8dSBarry Smith Not Collective 709eca87e8dSBarry Smith 710d382aafbSBarry Smith Input Parameter: 711d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7121795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7131795a4d1SJed Brown 7141795a4d1SJed Brown Output Parameter: 7151795a4d1SJed Brown + r1 - memory allocated in first chunk 7161795a4d1SJed Brown - r2 - memory allocated in second chunk 7171795a4d1SJed Brown 7181795a4d1SJed Brown Level: developer 7191795a4d1SJed Brown 7201795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7211795a4d1SJed Brown 7221795a4d1SJed Brown Concepts: memory allocation 7231795a4d1SJed Brown M*/ 7241795a4d1SJed Brown #define PetscCalloc2(m1,r1,m2,r2) (PetscMalloc2((m1),(r1),(m2),(r2)) || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2)))) 7251795a4d1SJed Brown 7261795a4d1SJed Brown /*MC 727dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 728d382aafbSBarry Smith 729d382aafbSBarry Smith Synopsis: 730aaa7dc30SBarry Smith #include <petscsys.h> 731dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 732d382aafbSBarry Smith 733d382aafbSBarry Smith Not Collective 734d382aafbSBarry Smith 735d382aafbSBarry Smith Input Parameter: 736d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 737d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 738dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 739d382aafbSBarry Smith 740d382aafbSBarry Smith Output Parameter: 741d382aafbSBarry Smith + r1 - memory allocated in first chunk 742d382aafbSBarry Smith . r2 - memory allocated in second chunk 743d382aafbSBarry Smith - r3 - memory allocated in third chunk 744d382aafbSBarry Smith 745d382aafbSBarry Smith Level: developer 746d382aafbSBarry Smith 7471795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 748d382aafbSBarry Smith 749d382aafbSBarry Smith Concepts: memory allocation 750d382aafbSBarry Smith 751d382aafbSBarry Smith M*/ 75220a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 7531d2f33c5SMatthew G. Knepley #define PetscMalloc3(m1,r1,m2,r2,m3,r3) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3))) 754d382aafbSBarry Smith #else 755ceba6b73SMatthew G. Knepley #define PetscMalloc3(m1,r1,m2,r2,m3,r3) ((((m1)+(m2)+(m3)) ? (*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+2*(PETSC_MEMALIGN-1),r1)) : 0) \ 756278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),0) \ 7573589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0)) 758d382aafbSBarry Smith #endif 759d382aafbSBarry Smith 760d382aafbSBarry Smith /*MC 7611795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 762d382aafbSBarry Smith 763eca87e8dSBarry Smith Synopsis: 764aaa7dc30SBarry Smith #include <petscsys.h> 7651795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 766eca87e8dSBarry Smith 767eca87e8dSBarry Smith Not Collective 768eca87e8dSBarry Smith 769d382aafbSBarry Smith Input Parameter: 770d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 771d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7721795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7731795a4d1SJed Brown 7741795a4d1SJed Brown Output Parameter: 7751795a4d1SJed Brown + r1 - memory allocated in first chunk 7761795a4d1SJed Brown . r2 - memory allocated in second chunk 7771795a4d1SJed Brown - r3 - memory allocated in third chunk 7781795a4d1SJed Brown 7791795a4d1SJed Brown Level: developer 7801795a4d1SJed Brown 7811795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7821795a4d1SJed Brown 7831795a4d1SJed Brown Concepts: memory allocation 7841795a4d1SJed Brown M*/ 7851795a4d1SJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) \ 7861795a4d1SJed Brown (PetscMalloc3((m1),(r1),(m2),(r2),(m3),(r3)) \ 7871795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3)))) 7881795a4d1SJed Brown 7891795a4d1SJed Brown /*MC 790dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 791d382aafbSBarry Smith 792d382aafbSBarry Smith Synopsis: 793aaa7dc30SBarry Smith #include <petscsys.h> 794dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 795d382aafbSBarry Smith 796d382aafbSBarry Smith Not Collective 797d382aafbSBarry Smith 798d382aafbSBarry Smith Input Parameter: 799d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 800d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 801d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 802dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 803d382aafbSBarry Smith 804d382aafbSBarry Smith Output Parameter: 805d382aafbSBarry Smith + r1 - memory allocated in first chunk 806d382aafbSBarry Smith . r2 - memory allocated in second chunk 807d382aafbSBarry Smith . r3 - memory allocated in third chunk 808d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 809d382aafbSBarry Smith 810d382aafbSBarry Smith Level: developer 811d382aafbSBarry Smith 8121795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 813d382aafbSBarry Smith 814d382aafbSBarry Smith Concepts: memory allocation 815d382aafbSBarry Smith 816d382aafbSBarry Smith M*/ 81720a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 8181d2f33c5SMatthew G. Knepley #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4))) 819d382aafbSBarry Smith #else 820dcca6d9dSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \ 821ceba6b73SMatthew G. Knepley ((((m1)+(m2)+(m3)+(m4)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+3*(PETSC_MEMALIGN-1),r1)) : 0) \ 822278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),0) \ 8233589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0) || (!(m4) ? (*(r4) = 0,0) : 0)) 824d382aafbSBarry Smith #endif 825d382aafbSBarry Smith 826d382aafbSBarry Smith /*MC 8271795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 828d382aafbSBarry Smith 829eca87e8dSBarry Smith Synopsis: 830aaa7dc30SBarry Smith #include <petscsys.h> 8311795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 832eca87e8dSBarry Smith 833eca87e8dSBarry Smith Not Collective 834eca87e8dSBarry Smith 835d382aafbSBarry Smith Input Parameter: 836d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 837d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 838d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8391795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8401795a4d1SJed Brown 8411795a4d1SJed Brown Output Parameter: 8421795a4d1SJed Brown + r1 - memory allocated in first chunk 8431795a4d1SJed Brown . r2 - memory allocated in second chunk 8441795a4d1SJed Brown . r3 - memory allocated in third chunk 8451795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8461795a4d1SJed Brown 8471795a4d1SJed Brown Level: developer 8481795a4d1SJed Brown 8491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8501795a4d1SJed Brown 8511795a4d1SJed Brown Concepts: memory allocation 8521795a4d1SJed Brown 8531795a4d1SJed Brown M*/ 8541795a4d1SJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \ 8551795a4d1SJed Brown (PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \ 8561795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \ 8571795a4d1SJed Brown || PetscMemzero(*(r4),(m4)*sizeof(**(r4)))) 8581795a4d1SJed Brown 8591795a4d1SJed Brown /*MC 860dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 861d382aafbSBarry Smith 862d382aafbSBarry Smith Synopsis: 863aaa7dc30SBarry Smith #include <petscsys.h> 864dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 865d382aafbSBarry Smith 866d382aafbSBarry Smith Not Collective 867d382aafbSBarry Smith 868d382aafbSBarry Smith Input Parameter: 869d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 870d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 871d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 872d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 873dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 874d382aafbSBarry Smith 875d382aafbSBarry Smith Output Parameter: 876d382aafbSBarry Smith + r1 - memory allocated in first chunk 877d382aafbSBarry Smith . r2 - memory allocated in second chunk 878d382aafbSBarry Smith . r3 - memory allocated in third chunk 879d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 880d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 881d382aafbSBarry Smith 882d382aafbSBarry Smith Level: developer 883d382aafbSBarry Smith 8841795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 885d382aafbSBarry Smith 886d382aafbSBarry Smith Concepts: memory allocation 887d382aafbSBarry Smith 888d382aafbSBarry Smith M*/ 88920a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 8901d2f33c5SMatthew G. Knepley #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5))) 891d382aafbSBarry Smith #else 892dcca6d9dSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \ 893ceba6b73SMatthew G. Knepley ((((m1)+(m2)+(m3)+(m4)+(m5)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+4*(PETSC_MEMALIGN-1),r1)) : 0) \ 894278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),0) \ 8953589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0) || (!(m4) ? (*(r4) = 0,0) : 0) || (!(m5) ? (*(r5) = 0,0) : 0)) 896d382aafbSBarry Smith #endif 897d382aafbSBarry Smith 898d382aafbSBarry Smith /*MC 8991795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 900d382aafbSBarry Smith 901eca87e8dSBarry Smith Synopsis: 902aaa7dc30SBarry Smith #include <petscsys.h> 9031795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 904eca87e8dSBarry Smith 905eca87e8dSBarry Smith Not Collective 906eca87e8dSBarry Smith 907d382aafbSBarry Smith Input Parameter: 908d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 909d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 910d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 911d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9121795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9131795a4d1SJed Brown 9141795a4d1SJed Brown Output Parameter: 9151795a4d1SJed Brown + r1 - memory allocated in first chunk 9161795a4d1SJed Brown . r2 - memory allocated in second chunk 9171795a4d1SJed Brown . r3 - memory allocated in third chunk 9181795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9191795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9201795a4d1SJed Brown 9211795a4d1SJed Brown Level: developer 9221795a4d1SJed Brown 9231795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9241795a4d1SJed Brown 9251795a4d1SJed Brown Concepts: memory allocation 9261795a4d1SJed Brown 9271795a4d1SJed Brown M*/ 9281795a4d1SJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \ 9291795a4d1SJed Brown (PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \ 9301795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \ 9311795a4d1SJed Brown || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5)))) 932d382aafbSBarry Smith 933d382aafbSBarry Smith /*MC 934dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 935d382aafbSBarry Smith 936d382aafbSBarry Smith Synopsis: 937aaa7dc30SBarry Smith #include <petscsys.h> 938dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 939d382aafbSBarry Smith 940d382aafbSBarry Smith Not Collective 941d382aafbSBarry Smith 942d382aafbSBarry Smith Input Parameter: 943d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 944d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 945d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 946d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 947d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 948dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 949d382aafbSBarry Smith 950d382aafbSBarry Smith Output Parameter: 951d382aafbSBarry Smith + r1 - memory allocated in first chunk 952d382aafbSBarry Smith . r2 - memory allocated in second chunk 953d382aafbSBarry Smith . r3 - memory allocated in third chunk 954d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 955d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 956d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 957d382aafbSBarry Smith 958d382aafbSBarry Smith Level: developer 959d382aafbSBarry Smith 9601795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 961d382aafbSBarry Smith 962d382aafbSBarry Smith Concepts: memory allocation 963d382aafbSBarry Smith 964d382aafbSBarry Smith M*/ 96520a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 9661d2f33c5SMatthew G. Knepley #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5)) || PetscMalloc1((m6),(r6))) 967d382aafbSBarry Smith #else 968dcca6d9dSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \ 969ceba6b73SMatthew G. Knepley ((((m1)+(m2)+(m3)+(m4)+(m5)+(m6)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+(m6)*sizeof(**(r6))+5*(PETSC_MEMALIGN-1),r1)) : 0) \ 970278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),*(void**)(r6) = PetscAddrAlign(*(r5)+(m5)),0) \ 9713589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0) || (!(m4) ? (*(r4) = 0,0) : 0) || (!(m5) ? (*(r5) = 0,0) : 0) || (!(m6) ? (*(r6) = 0,0) : 0)) 972d382aafbSBarry Smith #endif 973d382aafbSBarry Smith 974d382aafbSBarry Smith /*MC 9751795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 976d382aafbSBarry Smith 977eca87e8dSBarry Smith Synopsis: 978aaa7dc30SBarry Smith #include <petscsys.h> 9791795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 980eca87e8dSBarry Smith 981eca87e8dSBarry Smith Not Collective 982eca87e8dSBarry Smith 983d382aafbSBarry Smith Input Parameter: 984d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 985d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 986d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 987d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 988d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9891795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9901795a4d1SJed Brown 9911795a4d1SJed Brown Output Parameter: 9921795a4d1SJed Brown + r1 - memory allocated in first chunk 9931795a4d1SJed Brown . r2 - memory allocated in second chunk 9941795a4d1SJed Brown . r3 - memory allocated in third chunk 9951795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9961795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9971795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9981795a4d1SJed Brown 9991795a4d1SJed Brown Level: developer 10001795a4d1SJed Brown 10011795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 10021795a4d1SJed Brown 10031795a4d1SJed Brown Concepts: memory allocation 10041795a4d1SJed Brown M*/ 10051795a4d1SJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \ 10061795a4d1SJed Brown (PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \ 10071795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \ 10081795a4d1SJed Brown || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5))) || PetscMemzero(*(r6),(m6)*sizeof(**(r6)))) 10091795a4d1SJed Brown 10101795a4d1SJed Brown /*MC 1011dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 1012d382aafbSBarry Smith 1013d382aafbSBarry Smith Synopsis: 1014aaa7dc30SBarry Smith #include <petscsys.h> 1015dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1016d382aafbSBarry Smith 1017d382aafbSBarry Smith Not Collective 1018d382aafbSBarry Smith 1019d382aafbSBarry Smith Input Parameter: 1020d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1021d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1022d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1023d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1024d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1025d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1026dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1027d382aafbSBarry Smith 1028d382aafbSBarry Smith Output Parameter: 1029d382aafbSBarry Smith + r1 - memory allocated in first chunk 1030d382aafbSBarry Smith . r2 - memory allocated in second chunk 1031d382aafbSBarry Smith . r3 - memory allocated in third chunk 1032d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1033d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1034d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1035eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1036d382aafbSBarry Smith 1037d382aafbSBarry Smith Level: developer 1038d382aafbSBarry Smith 10391795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1040d382aafbSBarry Smith 1041d382aafbSBarry Smith Concepts: memory allocation 1042d382aafbSBarry Smith 1043d382aafbSBarry Smith M*/ 104420a89254SJed Brown #if !defined(PETSC_USE_MALLOC_COALESCED) 10451d2f33c5SMatthew G. Knepley #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5)) || PetscMalloc1((m6),(r6)) || PetscMalloc1((m7),(r7))) 1046d382aafbSBarry Smith #else 1047dcca6d9dSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \ 1048ceba6b73SMatthew G. Knepley ((((m1)+(m2)+(m3)+(m4)+(m5)+(m6)+(m7)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+(m6)*sizeof(**(r6))+(m7)*sizeof(**(r7))+6*(PETSC_MEMALIGN-1),r1)) : 0) \ 1049278791cbSMatthew G. Knepley || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),*(void**)(r6) = PetscAddrAlign(*(r5)+(m5)),*(void**)(r7) = PetscAddrAlign(*(r6)+(m6)),0) \ 10503589d31bSMatthew G. Knepley || (!(m1) ? (*(r1) = 0,0) : 0) || (!(m2) ? (*(r2) = 0,0) : 0) || (!(m3) ? (*(r3) = 0,0) : 0) || (!(m4) ? (*(r4) = 0,0) : 0) || (!(m5) ? (*(r5) = 0,0) : 0) || (!(m6) ? (*(r6) = 0,0) : 0) || (!(m7) ? (*(r7) = 0,0) : 0)) 1051d382aafbSBarry Smith #endif 1052d382aafbSBarry Smith 1053d382aafbSBarry Smith /*MC 10541795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10551795a4d1SJed Brown 10561795a4d1SJed Brown Synopsis: 1057aaa7dc30SBarry Smith #include <petscsys.h> 10581795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10591795a4d1SJed Brown 10601795a4d1SJed Brown Not Collective 10611795a4d1SJed Brown 10621795a4d1SJed Brown Input Parameter: 10631795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10641795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10651795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10661795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10671795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10681795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10691795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10701795a4d1SJed Brown 10711795a4d1SJed Brown Output Parameter: 10721795a4d1SJed Brown + r1 - memory allocated in first chunk 10731795a4d1SJed Brown . r2 - memory allocated in second chunk 10741795a4d1SJed Brown . r3 - memory allocated in third chunk 10751795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10761795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10771795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10781795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10791795a4d1SJed Brown 10801795a4d1SJed Brown Level: developer 10811795a4d1SJed Brown 10821795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10831795a4d1SJed Brown 10841795a4d1SJed Brown Concepts: memory allocation 10851795a4d1SJed Brown M*/ 10861795a4d1SJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \ 10877ba0cc92SJed Brown (PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \ 10881795a4d1SJed Brown || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \ 10891795a4d1SJed Brown || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5))) || PetscMemzero(*(r6),(m6)*sizeof(**(r6))) \ 10907ba0cc92SJed Brown || PetscMemzero(*(r7),(m7)*sizeof(**(r7)))) 10911795a4d1SJed Brown 10921795a4d1SJed Brown /*MC 1093503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1094d382aafbSBarry Smith 1095eca87e8dSBarry Smith Synopsis: 1096aaa7dc30SBarry Smith #include <petscsys.h> 1097b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1098eca87e8dSBarry Smith 1099eca87e8dSBarry Smith Not Collective 1100eca87e8dSBarry Smith 1101d382aafbSBarry Smith Output Parameter: 1102b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1103d382aafbSBarry Smith 1104d382aafbSBarry Smith Level: beginner 1105d382aafbSBarry Smith 1106ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog() 1107d382aafbSBarry Smith 1108d382aafbSBarry Smith Concepts: memory allocation 1109d382aafbSBarry Smith 1110d382aafbSBarry Smith M*/ 1111b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1112ad0619ddSBarry Smith 1113ad0619ddSBarry Smith /*MC 1114b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1115ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1116ad0619ddSBarry Smith 1117ad0619ddSBarry Smith Synopsis: 1118aaa7dc30SBarry Smith #include <petscsys.h> 1119b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1120ad0619ddSBarry Smith 1121ad0619ddSBarry Smith Not Collective 1122ad0619ddSBarry Smith 1123ad0619ddSBarry Smith Input Parameter: 1124b00a9115SJed Brown . obj - object memory is logged to 1125ad0619ddSBarry Smith 1126ad0619ddSBarry Smith Output Parameter: 1127b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1128ad0619ddSBarry Smith 1129ad0619ddSBarry Smith Level: developer 1130ad0619ddSBarry Smith 1131ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory() 1132ad0619ddSBarry Smith 1133ad0619ddSBarry Smith Concepts: memory allocation 1134ad0619ddSBarry Smith 1135ad0619ddSBarry Smith M*/ 1136d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1137d382aafbSBarry Smith 1138d382aafbSBarry Smith /*MC 1139d382aafbSBarry Smith PetscFree - Frees memory 1140d382aafbSBarry Smith 1141eca87e8dSBarry Smith Synopsis: 1142aaa7dc30SBarry Smith #include <petscsys.h> 1143eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1144eca87e8dSBarry Smith 1145eca87e8dSBarry Smith Not Collective 1146eca87e8dSBarry Smith 1147d382aafbSBarry Smith Input Parameter: 1148d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 1149d382aafbSBarry Smith 1150d382aafbSBarry Smith Level: beginner 1151d382aafbSBarry Smith 115249d7da52SJed Brown Notes: 115349d7da52SJed Brown Memory must have been obtained with PetscNew() or PetscMalloc(). 115449d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1155d382aafbSBarry Smith 1156d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 1157d382aafbSBarry Smith 1158d382aafbSBarry Smith Concepts: memory allocation 1159d382aafbSBarry Smith 1160d382aafbSBarry Smith M*/ 116149d7da52SJed Brown #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0)) 1162d382aafbSBarry Smith 1163d382aafbSBarry Smith /*MC 1164d382aafbSBarry Smith PetscFreeVoid - Frees memory 1165d382aafbSBarry Smith 1166d382aafbSBarry Smith Synopsis: 1167aaa7dc30SBarry Smith #include <petscsys.h> 1168d382aafbSBarry Smith void PetscFreeVoid(void *memory) 1169d382aafbSBarry Smith 1170eca87e8dSBarry Smith Not Collective 1171eca87e8dSBarry Smith 1172eca87e8dSBarry Smith Input Parameter: 1173eca87e8dSBarry Smith . memory - memory to free 1174eca87e8dSBarry Smith 1175d382aafbSBarry Smith Level: beginner 1176d382aafbSBarry Smith 1177d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 1178d382aafbSBarry Smith 1179d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 1180d382aafbSBarry Smith 1181d382aafbSBarry Smith Concepts: memory allocation 1182d382aafbSBarry Smith 1183d382aafbSBarry Smith M*/ 1184efca3c55SSatish Balay #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__),(a) = 0) 1185d382aafbSBarry Smith 1186d382aafbSBarry Smith 1187d382aafbSBarry Smith /*MC 1188d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1189d382aafbSBarry Smith 1190eca87e8dSBarry Smith Synopsis: 1191aaa7dc30SBarry Smith #include <petscsys.h> 1192eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1193eca87e8dSBarry Smith 1194eca87e8dSBarry Smith Not Collective 1195eca87e8dSBarry Smith 1196d382aafbSBarry Smith Input Parameter: 1197d382aafbSBarry Smith + memory1 - memory to free 1198d382aafbSBarry Smith - memory2 - 2nd memory to free 1199d382aafbSBarry Smith 1200d382aafbSBarry Smith Level: developer 1201d382aafbSBarry Smith 1202d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 1203d382aafbSBarry Smith 1204d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1205d382aafbSBarry Smith 1206d382aafbSBarry Smith Concepts: memory allocation 1207d382aafbSBarry Smith 1208d382aafbSBarry Smith M*/ 1209b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1210d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 1211d382aafbSBarry Smith #else 1212e38f91f2SMatthew G. Knepley #define PetscFree2(m1,m2) ((m1) ? ((m2)=0,PetscFree(m1)) : ((m1)=0,PetscFree(m2))) 1213d382aafbSBarry Smith #endif 1214d382aafbSBarry Smith 1215d382aafbSBarry Smith /*MC 1216d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1217d382aafbSBarry Smith 1218eca87e8dSBarry Smith Synopsis: 1219aaa7dc30SBarry Smith #include <petscsys.h> 1220eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1221eca87e8dSBarry Smith 1222eca87e8dSBarry Smith Not Collective 1223eca87e8dSBarry Smith 1224d382aafbSBarry Smith Input Parameter: 1225d382aafbSBarry Smith + memory1 - memory to free 1226d382aafbSBarry Smith . memory2 - 2nd memory to free 1227d382aafbSBarry Smith - memory3 - 3rd memory to free 1228d382aafbSBarry Smith 1229d382aafbSBarry Smith Level: developer 1230d382aafbSBarry Smith 1231d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 1232d382aafbSBarry Smith 1233d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1234d382aafbSBarry Smith 1235d382aafbSBarry Smith Concepts: memory allocation 1236d382aafbSBarry Smith 1237d382aafbSBarry Smith M*/ 1238b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1239d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1240d382aafbSBarry Smith #else 1241e38f91f2SMatthew G. Knepley #define PetscFree3(m1,m2,m3) ((m1) ? ((m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m3)=0,(m1)=0,PetscFree(m2)) : ((m2)=0,(m1)=0,PetscFree(m3)))) 1242d382aafbSBarry Smith #endif 1243d382aafbSBarry Smith 1244d382aafbSBarry Smith /*MC 1245d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1246d382aafbSBarry Smith 1247eca87e8dSBarry Smith Synopsis: 1248aaa7dc30SBarry Smith #include <petscsys.h> 1249eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1250eca87e8dSBarry Smith 1251eca87e8dSBarry Smith Not Collective 1252eca87e8dSBarry Smith 1253d382aafbSBarry Smith Input Parameter: 1254d382aafbSBarry Smith + m1 - memory to free 1255d382aafbSBarry Smith . m2 - 2nd memory to free 1256d382aafbSBarry Smith . m3 - 3rd memory to free 1257d382aafbSBarry Smith - m4 - 4th memory to free 1258d382aafbSBarry Smith 1259d382aafbSBarry Smith Level: developer 1260d382aafbSBarry Smith 1261d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 1262d382aafbSBarry Smith 1263d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1264d382aafbSBarry Smith 1265d382aafbSBarry Smith Concepts: memory allocation 1266d382aafbSBarry Smith 1267d382aafbSBarry Smith M*/ 1268b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1269d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1270d382aafbSBarry Smith #else 1271e38f91f2SMatthew G. Knepley #define PetscFree4(m1,m2,m3,m4) ((m1) ? ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : ((m3) ? ((m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m3)=0,(m2)=0,(m1)=0,PetscFree(m4))))) 1272d382aafbSBarry Smith #endif 1273d382aafbSBarry Smith 1274d382aafbSBarry Smith /*MC 1275d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1276d382aafbSBarry Smith 1277eca87e8dSBarry Smith Synopsis: 1278aaa7dc30SBarry Smith #include <petscsys.h> 1279eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1280eca87e8dSBarry Smith 1281eca87e8dSBarry Smith Not Collective 1282eca87e8dSBarry Smith 1283d382aafbSBarry Smith Input Parameter: 1284d382aafbSBarry Smith + m1 - memory to free 1285d382aafbSBarry Smith . m2 - 2nd memory to free 1286d382aafbSBarry Smith . m3 - 3rd memory to free 1287d382aafbSBarry Smith . m4 - 4th memory to free 1288d382aafbSBarry Smith - m5 - 5th memory to free 1289d382aafbSBarry Smith 1290d382aafbSBarry Smith Level: developer 1291d382aafbSBarry Smith 1292d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 1293d382aafbSBarry Smith 1294d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1295d382aafbSBarry Smith 1296d382aafbSBarry Smith Concepts: memory allocation 1297d382aafbSBarry Smith 1298d382aafbSBarry Smith M*/ 1299b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1300d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1301d382aafbSBarry Smith #else 1302e38f91f2SMatthew G. Knepley #define PetscFree5(m1,m2,m3,m4,m5) ((m1) ? ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : ((m3) ? ((m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : \ 1303e38f91f2SMatthew G. Knepley ((m4) ? ((m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : ((m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5)))))) 1304d382aafbSBarry Smith #endif 1305d382aafbSBarry Smith 1306d382aafbSBarry Smith 1307d382aafbSBarry Smith /*MC 1308d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1309d382aafbSBarry Smith 1310eca87e8dSBarry Smith Synopsis: 1311aaa7dc30SBarry Smith #include <petscsys.h> 1312eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1313eca87e8dSBarry Smith 1314eca87e8dSBarry Smith Not Collective 1315eca87e8dSBarry Smith 1316d382aafbSBarry Smith Input Parameter: 1317d382aafbSBarry Smith + m1 - memory to free 1318d382aafbSBarry Smith . m2 - 2nd memory to free 1319d382aafbSBarry Smith . m3 - 3rd memory to free 1320d382aafbSBarry Smith . m4 - 4th memory to free 1321d382aafbSBarry Smith . m5 - 5th memory to free 1322d382aafbSBarry Smith - m6 - 6th memory to free 1323d382aafbSBarry Smith 1324d382aafbSBarry Smith 1325d382aafbSBarry Smith Level: developer 1326d382aafbSBarry Smith 1327d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1328d382aafbSBarry Smith 1329d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1330d382aafbSBarry Smith 1331d382aafbSBarry Smith Concepts: memory allocation 1332d382aafbSBarry Smith 1333d382aafbSBarry Smith M*/ 1334b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1335d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1336d382aafbSBarry Smith #else 1337e38f91f2SMatthew G. Knepley #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m1) ? ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : \ 1338e38f91f2SMatthew G. Knepley ((m3) ? ((m6)=0,(m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m4) ? ((m6)=0,(m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : \ 1339e38f91f2SMatthew G. Knepley ((m5) ? ((m6)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5)) : ((m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m6))))))) 1340d382aafbSBarry Smith #endif 1341d382aafbSBarry Smith 1342d382aafbSBarry Smith /*MC 1343d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1344d382aafbSBarry Smith 1345eca87e8dSBarry Smith Synopsis: 1346aaa7dc30SBarry Smith #include <petscsys.h> 1347eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1348eca87e8dSBarry Smith 1349eca87e8dSBarry Smith Not Collective 1350eca87e8dSBarry Smith 1351d382aafbSBarry Smith Input Parameter: 1352d382aafbSBarry Smith + m1 - memory to free 1353d382aafbSBarry Smith . m2 - 2nd memory to free 1354d382aafbSBarry Smith . m3 - 3rd memory to free 1355d382aafbSBarry Smith . m4 - 4th memory to free 1356d382aafbSBarry Smith . m5 - 5th memory to free 1357d382aafbSBarry Smith . m6 - 6th memory to free 1358d382aafbSBarry Smith - m7 - 7th memory to free 1359d382aafbSBarry Smith 1360d382aafbSBarry Smith 1361d382aafbSBarry Smith Level: developer 1362d382aafbSBarry Smith 1363d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1364d382aafbSBarry Smith 1365d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1366d382aafbSBarry Smith PetscMalloc7() 1367d382aafbSBarry Smith 1368d382aafbSBarry Smith Concepts: memory allocation 1369d382aafbSBarry Smith 1370d382aafbSBarry Smith M*/ 1371b4cc1d85SMatthew G. Knepley #if !defined(PETSC_USE_MALLOC_COALESCED) 1372d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1373d382aafbSBarry Smith #else 1374e38f91f2SMatthew G. Knepley #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m1) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : \ 1375e38f91f2SMatthew G. Knepley ((m3) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m4) ? ((m7)=0,(m6)=0,(m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : \ 137606c0a5e5SMatthew G. Knepley ((m5) ? ((m7)=0,(m6)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5)) : ((m6) ? ((m7)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m6)) : \ 1377e38f91f2SMatthew G. Knepley ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m7)))))))) 1378d382aafbSBarry Smith #endif 1379d382aafbSBarry Smith 1380efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**); 1381efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 1382efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[])); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1384d382aafbSBarry Smith 1385d382aafbSBarry Smith /* 1386a5057860SBarry Smith PetscLogDouble variables are used to contain double precision numbers 1387a5057860SBarry Smith that are not used in the numerical computations, but rather in logging, 1388a5057860SBarry Smith timing etc. 1389a5057860SBarry Smith */ 1390a5057860SBarry Smith typedef double PetscLogDouble; 1391a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 1392a5057860SBarry Smith 1393a5057860SBarry Smith /* 139466d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1395d382aafbSBarry Smith */ 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 14010acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*); 1402efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1404574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble); 1405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1406d382aafbSBarry Smith 1407d382aafbSBarry Smith /*E 1408d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1409d382aafbSBarry Smith 1410d382aafbSBarry Smith Level: beginner 1411d382aafbSBarry Smith 1412d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1413d382aafbSBarry Smith 1414d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1415d382aafbSBarry Smith PetscDataTypeGetSize() 1416d382aafbSBarry Smith 1417d382aafbSBarry Smith E*/ 1418d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 14197e97c476SMatthew G. Knepley PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12, PETSC_STRING = 12} PetscDataType; 14206a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1421d382aafbSBarry Smith 1422d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1423d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1424d382aafbSBarry Smith #else 1425ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1426d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 142759a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 142859a34000SBarry Smith #define PETSC_SCALAR PETSC___FLOAT128 1429d382aafbSBarry Smith #else 1430d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1431d382aafbSBarry Smith #endif 1432d382aafbSBarry Smith #endif 1433ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1434d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 143559a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 143659a34000SBarry Smith #define PETSC_REAL PETSC___FLOAT128 1437d382aafbSBarry Smith #else 1438d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1439d382aafbSBarry Smith #endif 1440d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1441d382aafbSBarry Smith 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 14458e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1446d382aafbSBarry Smith 1447d382aafbSBarry Smith /* 1448d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1449d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1450d382aafbSBarry Smith functionality and/or error checking. 1451d382aafbSBarry Smith */ 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1456d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 14682f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 14732c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 147647340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 14776fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 14786991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 14796991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1481d382aafbSBarry Smith 1482573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1483573b0fb4SBarry Smith 1484d382aafbSBarry Smith /*S 1485d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1486d382aafbSBarry Smith 1487d382aafbSBarry Smith Level: intermediate 1488d382aafbSBarry Smith 1489d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1490d382aafbSBarry Smith S*/ 1491d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1492d382aafbSBarry Smith 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1496d382aafbSBarry Smith 1497a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1498a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1499a53986e1SJed Brown 1500d382aafbSBarry Smith /* 1501d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1502d382aafbSBarry Smith */ 1503014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op; 15047c2de775SJed Brown #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) 1505014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 15062414b3c7SJed Brown #else 15072414b3c7SJed Brown #define MPIU_SUM MPI_SUM 15082414b3c7SJed Brown #endif 15092414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128) 1510014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1511014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1512d9822059SBarry Smith #else 1513d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1514d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1515d9822059SBarry Smith #endif 1516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1517d382aafbSBarry Smith 1518014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1519014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1520eb3f98d2SBarry Smith 1521d382aafbSBarry Smith /*S 1522d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1523d382aafbSBarry Smith 1524d382aafbSBarry Smith Level: beginner 1525d382aafbSBarry Smith 15262981ebdbSBarry Smith Note: This is the base class from which all PETSc objects are derived from. 1527d382aafbSBarry Smith 15282b26979fSBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereference() 1529d382aafbSBarry Smith S*/ 1530d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1531d382aafbSBarry Smith 1532270bf2e7SJed Brown /*MC 1533127c8a3bSJed Brown PetscObjectId - unique integer Id for a PetscObject 1534127c8a3bSJed Brown 1535127c8a3bSJed Brown Level: developer 1536127c8a3bSJed Brown 1537127c8a3bSJed Brown Notes: Unlike pointer values, object ids are never reused. 1538127c8a3bSJed Brown 1539127c8a3bSJed Brown .seealso: PetscObjectState, PetscObjectGetId() 1540127c8a3bSJed Brown M*/ 1541127c8a3bSJed Brown typedef Petsc64bitInt PetscObjectId; 1542127c8a3bSJed Brown 1543127c8a3bSJed Brown /*MC 1544270bf2e7SJed Brown PetscObjectState - integer state for a PetscObject 1545270bf2e7SJed Brown 1546270bf2e7SJed Brown Level: developer 1547270bf2e7SJed Brown 1548270bf2e7SJed Brown Notes: 1549270bf2e7SJed Brown Object state is always-increasing and (for objects that track state) can be used to determine if an object has 1550270bf2e7SJed Brown changed since the last time you interacted with it. It is 64-bit so that it will not overflow for a very long time. 1551270bf2e7SJed Brown 15528dcff661SJed Brown .seealso: PetscObjectId, PetscObjectStateGet(), PetscObjectStateIncrease(), PetscObjectStateSet() 1553270bf2e7SJed Brown M*/ 1554270bf2e7SJed Brown typedef Petsc64bitInt PetscObjectState; 1555270bf2e7SJed Brown 1556d382aafbSBarry Smith /*S 1557140e18c1SBarry Smith PetscFunctionList - Linked list of functions, possibly stored in dynamic libraries, accessed 1558d382aafbSBarry Smith by string name 1559d382aafbSBarry Smith 1560d382aafbSBarry Smith Level: advanced 1561d382aafbSBarry Smith 1562140e18c1SBarry Smith .seealso: PetscFunctionListAdd(), PetscFunctionListDestroy(), PetscOpFlist 1563d382aafbSBarry Smith S*/ 1564140e18c1SBarry Smith typedef struct _n_PetscFunctionList *PetscFunctionList; 1565d382aafbSBarry Smith 1566d382aafbSBarry Smith /*E 1567d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1568d382aafbSBarry Smith 1569d382aafbSBarry Smith Level: beginner 1570d382aafbSBarry Smith 15711cc8b206SBarry Smith $ FILE_MODE_READ - open a file at its beginning for reading 15721cc8b206SBarry Smith $ FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 15731cc8b206SBarry Smith $ FILE_MODE_APPEND - open a file at end for writing 15741cc8b206SBarry Smith $ FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 15751cc8b206SBarry Smith $ FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1576d382aafbSBarry Smith 1577d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1578d382aafbSBarry Smith E*/ 1579d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1580d6a4318aSJed Brown extern const char *const PetscFileModes[]; 1581d6a4318aSJed Brown 1582639ff905SBarry Smith /* 1583639ff905SBarry Smith Defines PETSc error handling. 1584639ff905SBarry Smith */ 1585639ff905SBarry Smith #include <petscerror.h> 1586d382aafbSBarry Smith 15870700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1588014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1589014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1591d382aafbSBarry Smith 1592d382aafbSBarry Smith /* 1593d382aafbSBarry Smith Routines that get memory usage information from the OS 1594d382aafbSBarry Smith */ 1595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1598b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1599d382aafbSBarry Smith 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1602d382aafbSBarry Smith 1603d382aafbSBarry Smith /* 1604d382aafbSBarry Smith Initialization of PETSc 1605d382aafbSBarry Smith */ 1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1616d382aafbSBarry Smith 1617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1618607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1619d382aafbSBarry Smith 1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1624d382aafbSBarry Smith 1625d382aafbSBarry Smith /* 1626d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 16272981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1628d382aafbSBarry Smith */ 1629638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1630638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1631638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1632d382aafbSBarry Smith 1633d382aafbSBarry Smith /* 1634d382aafbSBarry Smith Functions that can act on any PETSc object. 1635d382aafbSBarry Smith */ 1636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision); 1642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1643014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1644014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1655bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1656bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 16590eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 16600eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1662d382aafbSBarry Smith 1663665c2dedSJed Brown #include <petscviewertypes.h> 1664639ff905SBarry Smith #include <petscoptions.h> 1665639ff905SBarry Smith 16660633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 16670633abcbSJed Brown 1668639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1669c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1670dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1671639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 16720005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 16730005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1674014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1675014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1676014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1677014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1678014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1679014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1681685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 1684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1686014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1687d382aafbSBarry Smith 1688e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 16897aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1690e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1691e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1692e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1693e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1694e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1695e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1696e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1697e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1698e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 169915681b3cSBarry Smith 1700ec7429eaSBarry Smith #else 17017aab2a10SBarry Smith #define PetscSAWsBlock() 0 1702e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1703e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1704e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1705e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1706e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1707e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1708e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1709e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1710e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 171115681b3cSBarry Smith 1712ec7429eaSBarry Smith #endif 1713b90c6cbeSBarry Smith 17147d5d4d99SBarry Smith typedef void* PetscDLHandle; 1715e4d177b5SBarry Smith typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode; 171682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 171782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 171882b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 17197d5d4d99SBarry Smith 17205fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1721a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 17225fe58b6fSBarry Smith #endif 17237eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1724a64a8e02SBarry Smith 1725d382aafbSBarry Smith /*S 1726140e18c1SBarry Smith PetscObjectList - Linked list of PETSc objects, each accessable by string name 1727d382aafbSBarry Smith 17281d0fab5eSBarry Smith Level: developer 1729d382aafbSBarry Smith 17301d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 17311d0fab5eSBarry Smith 1732140e18c1SBarry Smith .seealso: PetscObjectListAdd(), PetscObjectListDestroy(), PetscObjectListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFunctionList 1733d382aafbSBarry Smith S*/ 1734140e18c1SBarry Smith typedef struct _n_PetscObjectList *PetscObjectList; 1735d382aafbSBarry Smith 1736140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1737140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1738140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1739140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1740140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1741140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1742d382aafbSBarry Smith 1743d382aafbSBarry Smith /* 1744503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1745d382aafbSBarry Smith link libraries that will be loaded as needed. 1746d382aafbSBarry Smith */ 1747a240a19fSJed Brown 1748a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1749a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1750140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 17511c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 17521c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 1753140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]); 1754140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1755140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1756140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1757d382aafbSBarry Smith 1758d382aafbSBarry Smith /*S 1759d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1760d382aafbSBarry Smith 1761d382aafbSBarry Smith Level: advanced 1762d382aafbSBarry Smith 1763d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1764d382aafbSBarry Smith S*/ 1765d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1766014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1767014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1768014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1769014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1770014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1771014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1772014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1773014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1774d382aafbSBarry Smith 1775d382aafbSBarry Smith /* 1776d382aafbSBarry Smith Useful utility routines 1777d382aafbSBarry Smith */ 1778014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1779014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1780014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1781014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1782014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1783014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1784d382aafbSBarry Smith 1785503cfb0cSBarry Smith /* 1786ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1787503cfb0cSBarry Smith 1788503cfb0cSBarry Smith Notes: This is useful in cases like 1789503cfb0cSBarry Smith $ int *a; 1790ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 17911cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1792503cfb0cSBarry Smith */ 1793d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1794503cfb0cSBarry Smith 1795d382aafbSBarry Smith /*MC 1796d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1797d382aafbSBarry Smith 1798d382aafbSBarry Smith Synopsis: 1799aaa7dc30SBarry Smith #include <petscsys.h> 1800d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1801d382aafbSBarry Smith 1802eca87e8dSBarry Smith Not Collective 1803eca87e8dSBarry Smith 1804d382aafbSBarry Smith Input Parameters: 1805d382aafbSBarry Smith . format - the usual printf() format string 1806d382aafbSBarry Smith 1807d382aafbSBarry Smith Level: developer 1808d382aafbSBarry Smith 1809d382aafbSBarry Smith Fortran Note: 1810d382aafbSBarry Smith This routine is not supported in Fortran. 1811d382aafbSBarry Smith 1812d382aafbSBarry Smith Concepts: help messages^printing 1813d382aafbSBarry Smith Concepts: printing^help messages 1814d382aafbSBarry Smith 1815d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1816d382aafbSBarry Smith M*/ 1817014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1818d382aafbSBarry Smith 1819fcfd50ebSBarry Smith /* 1820fcfd50ebSBarry Smith Defines PETSc profiling. 1821fcfd50ebSBarry Smith */ 18222c8e378dSBarry Smith #include <petsclog.h> 1823fcfd50ebSBarry Smith 1824fcfd50ebSBarry Smith /* 1825fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1826fcfd50ebSBarry Smith */ 1827014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1828014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1829014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1830014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1831014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1832014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1833014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 1834fcfd50ebSBarry Smith 1835fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1836fcfd50ebSBarry Smith #include <stdarg.h> 1837014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 1838014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 1839014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list); 1840fcfd50ebSBarry Smith 1841fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE) 1842014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list); 1843fcfd50ebSBarry Smith #endif 1844fcfd50ebSBarry Smith 1845f1d7fe2eSBarry Smith #if defined(PETSC_HAVE_CLOSURES) 1846f1d7fe2eSBarry Smith PETSC_EXTERN PetscErrorCode PetscVFPrintfSetClosure(int (^)(const char*)); 1847f1d7fe2eSBarry Smith #endif 1848f1d7fe2eSBarry Smith 1849014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1850014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1851014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1852d382aafbSBarry Smith 1853d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1854014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 185596a8e8cbSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,int*); 185674ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1857d382aafbSBarry Smith #endif 1858d382aafbSBarry Smith 1859014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1860014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 18610ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1862014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1863014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1864014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1865014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1866d382aafbSBarry Smith 1867014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1868d382aafbSBarry Smith 1869d382aafbSBarry Smith /*S 1870d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1871d382aafbSBarry Smith 1872d382aafbSBarry Smith Level: advanced 1873d382aafbSBarry Smith 1874d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1875d382aafbSBarry Smith S*/ 1876014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1877d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 1878014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1879014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1880014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1881014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1882014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1883d382aafbSBarry Smith 1884d382aafbSBarry Smith /* 1885d382aafbSBarry Smith For use in debuggers 1886d382aafbSBarry Smith */ 1887014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1888014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1889014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1890014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1891014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1892d382aafbSBarry Smith 1893a663daf8SBarry Smith #include <stddef.h> 1894a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1895d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1896d382aafbSBarry Smith #include <stdlib.h> 1897d382aafbSBarry Smith #endif 18986c7e564aSBarry Smith 18994a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1900d382aafbSBarry Smith #include <xmmintrin.h> 1901d382aafbSBarry Smith #endif 1902d382aafbSBarry Smith 1903fcfd50ebSBarry Smith #undef __FUNCT__ 1904fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy" 1905d382aafbSBarry Smith /*@C 1906d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1907d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1908d382aafbSBarry Smith PetscMemmove() in that case. 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith Not Collective 1911d382aafbSBarry Smith 1912d382aafbSBarry Smith Input Parameters: 1913d382aafbSBarry Smith + b - pointer to initial memory space 1914d382aafbSBarry Smith - n - length (in bytes) of space to copy 1915d382aafbSBarry Smith 1916d382aafbSBarry Smith Output Parameter: 1917d382aafbSBarry Smith . a - pointer to copy space 1918d382aafbSBarry Smith 1919d382aafbSBarry Smith Level: intermediate 1920d382aafbSBarry Smith 1921d382aafbSBarry Smith Compile Option: 1922d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1923d382aafbSBarry Smith for memory copies on double precision values. 1924d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1925d382aafbSBarry Smith for memory copies on double precision values. 1926d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1927d382aafbSBarry Smith for memory copies on double precision values. 1928d382aafbSBarry Smith 1929d382aafbSBarry Smith Note: 1930d382aafbSBarry Smith This routine is analogous to memcpy(). 1931d382aafbSBarry Smith 1932503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1933503cfb0cSBarry Smith 1934d382aafbSBarry Smith Concepts: memory^copying 1935d382aafbSBarry Smith Concepts: copying^memory 1936d382aafbSBarry Smith 1937d382aafbSBarry Smith .seealso: PetscMemmove() 1938d382aafbSBarry Smith 1939d382aafbSBarry Smith @*/ 19407087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1941d382aafbSBarry Smith { 1942d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1943c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1944c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1945a7e36092SMatthew G Knepley PetscFunctionBegin; 1946e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1947e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1948a7e36092SMatthew G Knepley #else 1949d382aafbSBarry Smith PetscFunctionBegin; 1950a7e36092SMatthew G Knepley #endif 1951a47a537aSLisandro Dalcin if (a != b && n > 0) { 1952d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1953e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1954d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1955d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1956d382aafbSBarry Smith #endif 1957d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1958c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1959d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1960d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1961c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1962c5df96a5SBarry Smith PetscErrorCode ierr; 1963c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 19648b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1965d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1966d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1967d382aafbSBarry Smith #else 1968d382aafbSBarry Smith size_t i; 1969d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1970d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1971d382aafbSBarry Smith #endif 1972d382aafbSBarry Smith } else { 1973d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1974d382aafbSBarry Smith } 1975d382aafbSBarry Smith #else 1976d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1977d382aafbSBarry Smith #endif 1978d382aafbSBarry Smith } 1979d382aafbSBarry Smith PetscFunctionReturn(0); 1980d382aafbSBarry Smith } 1981d382aafbSBarry Smith 1982d382aafbSBarry Smith /*@C 1983d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1984d382aafbSBarry Smith 1985d382aafbSBarry Smith Not Collective 1986d382aafbSBarry Smith 1987d382aafbSBarry Smith Input Parameters: 1988d382aafbSBarry Smith + a - pointer to beginning memory location 1989d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1990d382aafbSBarry Smith 1991d382aafbSBarry Smith Level: intermediate 1992d382aafbSBarry Smith 1993d382aafbSBarry Smith Compile Option: 1994d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1995d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1996d382aafbSBarry Smith 1997503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1998503cfb0cSBarry Smith 1999d382aafbSBarry Smith Concepts: memory^zeroing 2000d382aafbSBarry Smith Concepts: zeroing^memory 2001d382aafbSBarry Smith 2002d382aafbSBarry Smith .seealso: PetscMemcpy() 2003d382aafbSBarry Smith @*/ 20047087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 2005d382aafbSBarry Smith { 2006d382aafbSBarry Smith if (n > 0) { 2007d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 2008e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 2009d382aafbSBarry Smith #endif 2010d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 2011d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 2012d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 2013d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 2014d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 2015d382aafbSBarry Smith } else { 2016d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 2017d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 2018d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 2019d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 2020d382aafbSBarry Smith } else { 2021d382aafbSBarry Smith #endif 2022d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 2023d382aafbSBarry Smith bzero((char *)a,n); 2024d382aafbSBarry Smith #else 2025d382aafbSBarry Smith memset((char*)a,0,n); 2026d382aafbSBarry Smith #endif 2027d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 2028d382aafbSBarry Smith } 2029d382aafbSBarry Smith #endif 2030d382aafbSBarry Smith } 2031d382aafbSBarry Smith return 0; 2032d382aafbSBarry Smith } 2033d382aafbSBarry Smith 2034d382aafbSBarry Smith /*MC 2035d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 2036d382aafbSBarry Smith 2037eca87e8dSBarry Smith Synopsis: 2038aaa7dc30SBarry Smith #include <petscsys.h> 2039eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 2040eca87e8dSBarry Smith 2041d382aafbSBarry Smith Not Collective 2042d382aafbSBarry Smith 2043d382aafbSBarry Smith Input Parameters: 2044d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 2045d382aafbSBarry Smith . n - number of elements to fetch 2046d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 204750d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2048d382aafbSBarry Smith 2049d382aafbSBarry Smith Level: developer 2050d382aafbSBarry Smith 2051d382aafbSBarry Smith Notes: 2052d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2053d382aafbSBarry Smith 205450d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 205550d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 205650d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 205763cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 205863cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 205963cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2060d382aafbSBarry Smith 2061d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2062d382aafbSBarry Smith address). 2063d382aafbSBarry Smith 2064d382aafbSBarry Smith Concepts: memory 2065d382aafbSBarry Smith M*/ 2066d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2067d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2068d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2069d382aafbSBarry Smith } while (0) 2070d382aafbSBarry Smith 2071d382aafbSBarry Smith /* 2072d382aafbSBarry Smith Determine if some of the kernel computation routines use 2073d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2074d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2075d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2076e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2077d382aafbSBarry Smith */ 2078d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2079d382aafbSBarry Smith 2080d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2081d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2082d382aafbSBarry Smith #endif 2083d382aafbSBarry Smith 20845a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20855a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2086d382aafbSBarry Smith #endif 2087d382aafbSBarry Smith 2088d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2089d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2090d382aafbSBarry Smith #endif 2091d382aafbSBarry Smith 2092d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2093d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2094d382aafbSBarry Smith #endif 2095d382aafbSBarry Smith 2096d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2097d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2098d382aafbSBarry Smith #endif 2099d382aafbSBarry Smith 2100d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2101d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2102d382aafbSBarry Smith #endif 2103d382aafbSBarry Smith 2104d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2105d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2106d382aafbSBarry Smith #endif 2107d382aafbSBarry Smith 2108d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2109d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2110d382aafbSBarry Smith #endif 2111d382aafbSBarry Smith 2112d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2113d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2114d382aafbSBarry Smith #endif 2115d382aafbSBarry Smith 2116d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2117d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2118d382aafbSBarry Smith #endif 2119d382aafbSBarry Smith 2120d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2121d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2122d382aafbSBarry Smith #endif 2123d382aafbSBarry Smith 2124d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2125d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2126d382aafbSBarry Smith #endif 2127d382aafbSBarry Smith 2128d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2129d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2130d382aafbSBarry Smith #endif 2131d382aafbSBarry Smith 2132d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2133d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2134d382aafbSBarry Smith #endif 2135d382aafbSBarry Smith 2136d382aafbSBarry Smith #endif 2137d382aafbSBarry Smith 2138d382aafbSBarry Smith /* 2139d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2140d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2141d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2142d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2143d382aafbSBarry Smith ugly extern "C" {} wrappers. 2144d382aafbSBarry Smith */ 2145d382aafbSBarry Smith #if defined(__cplusplus) 2146d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 2147d382aafbSBarry Smith #define EXTERN_C_END } 2148d382aafbSBarry Smith #else 2149d382aafbSBarry Smith #define EXTERN_C_BEGIN 2150d382aafbSBarry Smith #define EXTERN_C_END 2151d382aafbSBarry Smith #endif 2152d382aafbSBarry Smith 2153d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2154d382aafbSBarry Smith 2155d382aafbSBarry Smith /*MC 2156d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2157d382aafbSBarry Smith communication 2158d382aafbSBarry Smith 2159d382aafbSBarry Smith Level: beginner 2160d382aafbSBarry Smith 2161d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2162d382aafbSBarry Smith 2163d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2164d382aafbSBarry Smith M*/ 2165d382aafbSBarry Smith 2166d382aafbSBarry Smith /*MC 2167d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 2168d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 21691cc8b206SBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,__float128 2170d382aafbSBarry Smith 2171d382aafbSBarry Smith Level: beginner 2172d382aafbSBarry Smith 21731cc8b206SBarry Smith .seealso: PetscReal, MPIU_SCALAR, PetscInt, MPIU_REAL 2174d382aafbSBarry Smith M*/ 2175d382aafbSBarry Smith 2176d382aafbSBarry Smith /*MC 21778619c96cSJed Brown PetscComplex - PETSc type that represents a complex number with precision matching that of PetscReal. 21788619c96cSJed Brown 21798619c96cSJed Brown Synopsis: 21808619c96cSJed Brown #include <petscsys.h> 21818619c96cSJed Brown PetscComplex number = 1. + 2.*PETSC_i; 21828619c96cSJed Brown 21838619c96cSJed Brown Level: beginner 21848619c96cSJed Brown 21858619c96cSJed Brown Note: 21868cd53115SBarry Smith Complex numbers are automatically available if PETSc was able to find a working complex implementation 21878619c96cSJed Brown 21888619c96cSJed Brown .seealso: PetscReal, PetscComplex, MPIU_COMPLEX, PetscInt, PETSC_i 21898619c96cSJed Brown M*/ 21908619c96cSJed Brown 21918619c96cSJed Brown /*MC 2192d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 2193d382aafbSBarry Smith 2194d382aafbSBarry Smith Level: beginner 2195d382aafbSBarry Smith 21961cc8b206SBarry Smith .seealso: PetscScalar 2197d382aafbSBarry Smith M*/ 2198d382aafbSBarry Smith 2199d382aafbSBarry Smith /*MC 2200d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2201d382aafbSBarry Smith 2202d382aafbSBarry Smith Level: beginner 2203d382aafbSBarry Smith 2204d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2205d382aafbSBarry Smith pass this value 2206d382aafbSBarry Smith 22071cc8b206SBarry Smith .seealso: PetscReal, PetscScalar, MPIU_INT 2208d382aafbSBarry Smith M*/ 2209d382aafbSBarry Smith 2210d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2211d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2212014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2213014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2214d382aafbSBarry Smith #else 2215d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2216d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2217d382aafbSBarry Smith #endif 2218d382aafbSBarry Smith #endif 2219d382aafbSBarry Smith 2220d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2221d382aafbSBarry Smith 2222d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2223d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2224d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2225d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2226d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2227d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2228d382aafbSBarry Smith 2229c5df96a5SBarry Smith #undef __FUNCT__ 2230c5df96a5SBarry Smith #define __FUNCT__ "PetscBLASIntCast" 223161b0d812SBarry Smith /*@C 223261b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 223361b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 223461b0d812SBarry Smith 223561b0d812SBarry Smith Not Collective 223661b0d812SBarry Smith 223761b0d812SBarry Smith Input Parameter: 223861b0d812SBarry Smith . a - the PetscInt value 223961b0d812SBarry Smith 224061b0d812SBarry Smith Output Parameter: 224161b0d812SBarry Smith . b - the resulting PetscBLASInt value 224261b0d812SBarry Smith 224361b0d812SBarry Smith Level: advanced 224461b0d812SBarry Smith 224561b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast() 224661b0d812SBarry Smith @*/ 2247c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2248c5df96a5SBarry Smith { 2249c5df96a5SBarry Smith PetscFunctionBegin; 2250ab7117d1SBarry Smith *b = (PetscBLASInt)(a); 2251c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2252c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2253c5df96a5SBarry Smith #endif 2254c5df96a5SBarry Smith PetscFunctionReturn(0); 2255c5df96a5SBarry Smith } 2256c5df96a5SBarry Smith 22574dc2109aSBarry Smith #undef __FUNCT__ 22584dc2109aSBarry Smith #define __FUNCT__ "PetscMPIIntCast" 225961b0d812SBarry Smith /*@C 226061b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 226161b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 226261b0d812SBarry Smith 226361b0d812SBarry Smith Not Collective 226461b0d812SBarry Smith 226561b0d812SBarry Smith Input Parameter: 226661b0d812SBarry Smith . a - the PetscInt value 226761b0d812SBarry Smith 226861b0d812SBarry Smith Output Parameter: 226961b0d812SBarry Smith . b - the resulting PetscMPIInt value 227061b0d812SBarry Smith 227161b0d812SBarry Smith Level: advanced 227261b0d812SBarry Smith 227361b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast() 227461b0d812SBarry Smith @*/ 22754dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22764dc2109aSBarry Smith { 22774dc2109aSBarry Smith PetscFunctionBegin; 2278ab7117d1SBarry Smith *b = (PetscMPIInt)(a); 22794dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 22804dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 22814dc2109aSBarry Smith #endif 22824dc2109aSBarry Smith PetscFunctionReturn(0); 22834dc2109aSBarry Smith } 22844dc2109aSBarry Smith 22852f18eb33SBarry Smith #define PetscIntMult64bit(a,b) ((Petsc64bitInt)(a))*((Petsc64bitInt)(b)) 22862f18eb33SBarry Smith 22872f18eb33SBarry Smith #undef __FUNCT__ 22882f18eb33SBarry Smith #define __FUNCT__ "PetscRealIntMultTruncate" 22892f18eb33SBarry Smith /*@C 22902f18eb33SBarry Smith 22912f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22922f18eb33SBarry Smith 22932f18eb33SBarry Smith Not Collective 22942f18eb33SBarry Smith 22952f18eb33SBarry Smith Input Parameter: 22962f18eb33SBarry Smith + a - the PetscReal value 22972f18eb33SBarry Smith - b - the second value 22982f18eb33SBarry Smith 22992f18eb33SBarry Smith Output Parameter: 23002f18eb33SBarry Smith . c - the result as a PetscInt value 23012f18eb33SBarry Smith 23022f18eb33SBarry Smith Use PetscIntMult64bit() to compute the product of two PetscInt as a Petsc64bitInt 23032f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 23042f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23052f18eb33SBarry Smith 23062f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23072f18eb33SBarry Smith 23082f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23092f18eb33SBarry Smith 23102f18eb33SBarry Smith Level: advanced 23112f18eb33SBarry Smith 23122f18eb33SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64() 23132f18eb33SBarry Smith @*/ 23142f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 23152f18eb33SBarry Smith { 23162f18eb33SBarry Smith Petsc64bitInt r; 23172f18eb33SBarry Smith 23182d4442ebSLisandro Dalcin r = (Petsc64bitInt) (a*(PetscReal)b); 23192f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23202f18eb33SBarry Smith return (PetscInt) r; 23212f18eb33SBarry Smith } 23222f18eb33SBarry Smith 23232f18eb33SBarry Smith #undef __FUNCT__ 23242f18eb33SBarry Smith #define __FUNCT__ "PetscIntMultTruncate" 23252f18eb33SBarry Smith /*@C 23262f18eb33SBarry Smith 23272f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23282f18eb33SBarry Smith 23292f18eb33SBarry Smith Not Collective 23302f18eb33SBarry Smith 23312f18eb33SBarry Smith Input Parameter: 23322f18eb33SBarry Smith + a - the PetscInt value 23332f18eb33SBarry Smith - b - the second value 23342f18eb33SBarry Smith 23352f18eb33SBarry Smith Output Parameter: 23362f18eb33SBarry Smith . c - the result as a PetscInt value 23372f18eb33SBarry Smith 23382f18eb33SBarry Smith Use PetscIntMult64bit() to compute the product of two PetscInt as a Petsc64bitInt 23392f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23402f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23412f18eb33SBarry Smith 23422f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23432f18eb33SBarry Smith 23442f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23452f18eb33SBarry Smith 23462f18eb33SBarry Smith Level: advanced 23472f18eb33SBarry Smith 23482f18eb33SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64() 23492f18eb33SBarry Smith @*/ 23502f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23512f18eb33SBarry Smith { 23522f18eb33SBarry Smith Petsc64bitInt r; 23532f18eb33SBarry Smith 23542f18eb33SBarry Smith r = PetscIntMult64bit(a,b); 23552f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23562f18eb33SBarry Smith return (PetscInt) r; 23572f18eb33SBarry Smith } 23582f18eb33SBarry Smith 23592f18eb33SBarry Smith #undef __FUNCT__ 2360f91af8c7SBarry Smith #define __FUNCT__ "PetscIntSumTruncate" 2361f91af8c7SBarry Smith /*@C 2362f91af8c7SBarry Smith 2363f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2364f91af8c7SBarry Smith 2365f91af8c7SBarry Smith Not Collective 2366f91af8c7SBarry Smith 2367f91af8c7SBarry Smith Input Parameter: 2368f91af8c7SBarry Smith + a - the PetscInt value 2369f91af8c7SBarry Smith - b - the second value 2370f91af8c7SBarry Smith 2371f91af8c7SBarry Smith Output Parameter: 2372f91af8c7SBarry Smith . c - the result as a PetscInt value 2373f91af8c7SBarry Smith 2374f91af8c7SBarry Smith Use PetscIntMult64bit() to compute the product of two PetscInt as a Petsc64bitInt 2375f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2376f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2377f91af8c7SBarry Smith 2378f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2379f91af8c7SBarry Smith 2380f91af8c7SBarry Smith Level: advanced 2381f91af8c7SBarry Smith 2382f91af8c7SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64() 2383f91af8c7SBarry Smith @*/ 2384f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2385f91af8c7SBarry Smith { 2386f91af8c7SBarry Smith Petsc64bitInt r; 2387f91af8c7SBarry Smith 2388f91af8c7SBarry Smith r = ((Petsc64bitInt)a) + ((Petsc64bitInt)b); 2389f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2390f91af8c7SBarry Smith return (PetscInt) r; 2391f91af8c7SBarry Smith } 2392f91af8c7SBarry Smith 2393f91af8c7SBarry Smith #undef __FUNCT__ 23942f18eb33SBarry Smith #define __FUNCT__ "PetscIntMultError" 23952f18eb33SBarry Smith /*@C 23962f18eb33SBarry Smith 23972f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23982f18eb33SBarry Smith 23992f18eb33SBarry Smith Not Collective 24002f18eb33SBarry Smith 24012f18eb33SBarry Smith Input Parameter: 24022f18eb33SBarry Smith + a - the PetscInt value 24032f18eb33SBarry Smith - b - the second value 24042f18eb33SBarry Smith 24052f18eb33SBarry Smith Output Parameter:ma 24062f18eb33SBarry Smith . c - the result as a PetscInt value 24072f18eb33SBarry Smith 24082f18eb33SBarry Smith Use PetscIntMult64bit() to compute the product of two 32 bit PetscInt and store in a Petsc64bitInt 24092f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 24102f18eb33SBarry Smith 24112f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 24122f18eb33SBarry Smith 24132f18eb33SBarry Smith Level: advanced 24142f18eb33SBarry Smith 24152f18eb33SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64() 24162f18eb33SBarry Smith @*/ 24172f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 24182f18eb33SBarry Smith { 24192f18eb33SBarry Smith Petsc64bitInt r; 24202f18eb33SBarry Smith 24212f18eb33SBarry Smith PetscFunctionBegin; 24222f18eb33SBarry Smith r = PetscIntMult64bit(a,b); 24232f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 24242f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 24252f18eb33SBarry Smith #endif 2426f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2427f91af8c7SBarry Smith PetscFunctionReturn(0); 2428f91af8c7SBarry Smith } 2429f91af8c7SBarry Smith 2430f91af8c7SBarry Smith #undef __FUNCT__ 2431f91af8c7SBarry Smith #define __FUNCT__ "PetscIntSumError" 2432f91af8c7SBarry Smith /*@C 2433f91af8c7SBarry Smith 2434f91af8c7SBarry Smith PetscIntSumError - Computes the product of two positive PetscInt and generates an error with overflow. 2435f91af8c7SBarry Smith 2436f91af8c7SBarry Smith Not Collective 2437f91af8c7SBarry Smith 2438f91af8c7SBarry Smith Input Parameter: 2439f91af8c7SBarry Smith + a - the PetscInt value 2440f91af8c7SBarry Smith - b - the second value 2441f91af8c7SBarry Smith 2442f91af8c7SBarry Smith Output Parameter:ma 2443f91af8c7SBarry Smith . c - the result as a PetscInt value 2444f91af8c7SBarry Smith 2445f91af8c7SBarry Smith Use PetscIntMult64bit() to compute the product of two 32 bit PetscInt and store in a Petsc64bitInt 2446f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2447f91af8c7SBarry Smith 2448f91af8c7SBarry Smith Level: advanced 2449f91af8c7SBarry Smith 2450f91af8c7SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64() 2451f91af8c7SBarry Smith @*/ 2452f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2453f91af8c7SBarry Smith { 2454f91af8c7SBarry Smith Petsc64bitInt r; 2455f91af8c7SBarry Smith 2456f91af8c7SBarry Smith PetscFunctionBegin; 2457f91af8c7SBarry Smith r = ((Petsc64bitInt)a) + ((Petsc64bitInt)b); 2458f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2459f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2460f91af8c7SBarry Smith #endif 2461f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 24622f18eb33SBarry Smith PetscFunctionReturn(0); 24632f18eb33SBarry Smith } 2464c5df96a5SBarry Smith 2465d382aafbSBarry Smith /* 24662981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2467d382aafbSBarry Smith */ 2468d382aafbSBarry Smith #if defined(hz) 2469d382aafbSBarry Smith #undef hz 2470d382aafbSBarry Smith #endif 2471d382aafbSBarry Smith 2472d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2473d382aafbSBarry Smith 2474d382aafbSBarry Smith 2475d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2476d382aafbSBarry Smith #include <limits.h> 2477d382aafbSBarry Smith #endif 2478d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2479d382aafbSBarry Smith #include <sys/param.h> 2480d382aafbSBarry Smith #endif 2481d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2482d382aafbSBarry Smith #include <sys/types.h> 2483d382aafbSBarry Smith #endif 2484d382aafbSBarry Smith #if defined(MAXPATHLEN) 2485d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2486d382aafbSBarry Smith #elif defined(MAX_PATH) 2487d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2488d382aafbSBarry Smith #elif defined(_MAX_PATH) 2489d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2490d382aafbSBarry Smith #else 2491d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2492d382aafbSBarry Smith #endif 2493d382aafbSBarry Smith 2494d382aafbSBarry Smith /*MC 2495d382aafbSBarry Smith 2496d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2497d382aafbSBarry Smith 2498d382aafbSBarry Smith $ 1) classic Fortran 77 style 2499af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" to work with material from the XXX component of PETSc 2500d382aafbSBarry Smith $ XXX variablename 2501d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2502d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2503d382aafbSBarry Smith $ 2504d382aafbSBarry Smith $ 2) classic Fortran 90 style 2505af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 2506af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2507d382aafbSBarry Smith $ XXX variablename 2508d382aafbSBarry Smith $ 2509d382aafbSBarry Smith $ 3) Using Fortran modules 2510af0996ceSBarry Smith $#include "petsc/finclude/petscXXXdef.h" 2511d382aafbSBarry Smith $ use petscXXXX 2512d382aafbSBarry Smith $ XXX variablename 2513d382aafbSBarry Smith $ 2514d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2515af0996ceSBarry Smith $#include "petsc/finclude/petscXXXdef.h" 2516d382aafbSBarry Smith $ use petscXXXX 2517d382aafbSBarry Smith $ type(XXX) variablename 2518e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2519d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2520d382aafbSBarry Smith 2521d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2522d382aafbSBarry Smith 2523d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2524d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2525d382aafbSBarry Smith $ integer variablename 2526d382aafbSBarry Smith $ 2527d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2528d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2529d382aafbSBarry Smith 2530d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2531d382aafbSBarry Smith for only a few PETSc functions. 2532d382aafbSBarry Smith 2533d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2534d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2535d382aafbSBarry Smith you cannot have something like 2536d382aafbSBarry Smith $ PetscInt row,col 2537d382aafbSBarry Smith $ PetscScalar val 2538d382aafbSBarry Smith $ ... 2539d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2540d382aafbSBarry Smith You must instead have 2541d382aafbSBarry Smith $ PetscInt row(1),col(1) 2542d382aafbSBarry Smith $ PetscScalar val(1) 2543d382aafbSBarry Smith $ ... 2544d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2545d382aafbSBarry Smith 2546d382aafbSBarry Smith 2547d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2548d382aafbSBarry Smith 2549af0996ceSBarry Smith Developer Notes: The petsc/finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2550af0996ceSBarry Smith automatically include their predecessors; for example petsc/finclude/petscvecdef.h includes petsc/finclude/petscisdef.h 2551d382aafbSBarry Smith 2552af0996ceSBarry Smith The petsc/finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2553af0996ceSBarry Smith their petsc/finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2554af0996ceSBarry Smith petsc/finclude/petscvec.h does NOT automatically include petsc/finclude/petscis.h 2555d382aafbSBarry Smith 2556af0996ceSBarry Smith The petsc/finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2557e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2558d382aafbSBarry Smith 2559af0996ceSBarry Smith The petsc/finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2560d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2561d382aafbSBarry Smith 2562af0996ceSBarry Smith The petsc/finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2563d382aafbSBarry Smith automatically by "make allfortranstubs". 2564d382aafbSBarry Smith 2565af0996ceSBarry Smith The petsc/finclude/petscXXX.h90 includes the custom petsc/finclude/ftn-custom/petscXXX.h90 and if ./configure 2566af0996ceSBarry Smith was run with --with-fortran-interfaces it also includes the petsc/finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2567d382aafbSBarry Smith include their predecessors 2568d382aafbSBarry Smith 2569d382aafbSBarry Smith Level: beginner 2570d382aafbSBarry Smith 2571d382aafbSBarry Smith M*/ 2572d382aafbSBarry Smith 2573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2574014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 257927710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 2580d382aafbSBarry Smith 2581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 258360e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2585014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2586014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*); 258817d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 258917d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 259217df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 2594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2595745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 2596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**); 260021e72a00SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt*,PetscInt,const PetscInt*,PetscInt*,PetscInt**); 2601e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2602d382aafbSBarry Smith 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2605d382aafbSBarry Smith 260676bdecfbSBarry Smith /*J 2607d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2608d382aafbSBarry Smith 2609d382aafbSBarry Smith Level: beginner 2610d382aafbSBarry Smith 2611e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2612d382aafbSBarry Smith with the option --download-sprng 2613d382aafbSBarry Smith 26148f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 261576bdecfbSBarry Smith J*/ 261619fd82e9SBarry Smith typedef const char* PetscRandomType; 2617d382aafbSBarry Smith #define PETSCRAND "rand" 2618d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2619d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2620c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 2621d382aafbSBarry Smith 2622d382aafbSBarry Smith /* Logging support */ 2623014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2624d382aafbSBarry Smith 2625607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2626d382aafbSBarry Smith 2627d382aafbSBarry Smith /*S 2628d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2629d382aafbSBarry Smith 2630d382aafbSBarry Smith Level: intermediate 2631d382aafbSBarry Smith 2632d382aafbSBarry Smith Concepts: random numbers 2633d382aafbSBarry Smith 2634d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2635d382aafbSBarry Smith S*/ 2636d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2637d382aafbSBarry Smith 2638d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2639140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2640d382aafbSBarry Smith 2641bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 264219fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2643014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 264419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2645685405a1SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);} 2646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2647d382aafbSBarry Smith 2648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2655014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2656014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2657d382aafbSBarry Smith 2658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2660014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2662014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2663014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2664014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 266597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 266697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2667d382aafbSBarry Smith 2668014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2669014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2670014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2671014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 2672014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2673014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2674014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2675014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2676014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2677014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2678014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2679e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2680d382aafbSBarry Smith 2681d382aafbSBarry Smith /* 2682d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2683d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2684d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2685d382aafbSBarry Smith PetscBinarySeek(). 2686d382aafbSBarry Smith */ 2687d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2688d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2689d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2690d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2691d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2692d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2693d382aafbSBarry Smith 2694d382aafbSBarry Smith /*E 2695d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2696d382aafbSBarry Smith 2697d382aafbSBarry Smith Level: advanced 2698d382aafbSBarry Smith 2699d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2700d382aafbSBarry Smith E*/ 2701d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2702014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2703014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2704014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2705d382aafbSBarry Smith 2706014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2707014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2708014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2709014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2710014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2711014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2712d382aafbSBarry Smith 2713014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2714014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2715014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2716014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2717014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2718cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2719cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2720d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2721d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2722d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2723d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 27246afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 27256afbe7ddSJed Brown MPI_Request**,MPI_Request**, 27266afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 27276afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 27286afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2729d382aafbSBarry Smith 27306145cd65SJed Brown /*E 27316145cd65SJed Brown PetscBuildTwoSidedType - algorithm for setting up two-sided communication 27326145cd65SJed Brown 27336145cd65SJed Brown $ PETSC_BUILDTWOSIDED_ALLREDUCE - classical algorithm using an MPI_Allreduce with 27346145cd65SJed Brown $ a buffer of length equal to the communicator size. Not memory-scalable due to 27356145cd65SJed Brown $ the large reduction size. Requires only MPI-1. 27366145cd65SJed Brown $ PETSC_BUILDTWOSIDED_IBARRIER - nonblocking algorithm based on MPI_Issend and MPI_Ibarrier. 27376145cd65SJed Brown $ Proved communication-optimal in Hoefler, Siebert, and Lumsdaine (2010). Requires MPI-3. 27381654bf6bSJed Brown $ PETSC_BUILDTWOSIDED_REDSCATTER - similar to above, but use more optimized function 27391654bf6bSJed Brown $ that only communicates the part of the reduction that is necessary. Requires MPI-2. 27406145cd65SJed Brown 27416145cd65SJed Brown Level: developer 27426145cd65SJed Brown 27436145cd65SJed Brown .seealso: PetscCommBuildTwoSided(), PetscCommBuildTwoSidedSetType(), PetscCommBuildTwoSidedGetType() 27446145cd65SJed Brown E*/ 27456145cd65SJed Brown typedef enum { 27466145cd65SJed Brown PETSC_BUILDTWOSIDED_NOTSET = -1, 27476145cd65SJed Brown PETSC_BUILDTWOSIDED_ALLREDUCE = 0, 27481654bf6bSJed Brown PETSC_BUILDTWOSIDED_IBARRIER = 1, 274912af867fSJed Brown PETSC_BUILDTWOSIDED_REDSCATTER = 2 27506145cd65SJed Brown /* Updates here must be accompanied by updates in finclude/petscsys.h and the string array in mpits.c */ 27516145cd65SJed Brown } PetscBuildTwoSidedType; 27526145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 27536145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 27546145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 27556145cd65SJed Brown 2756014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2757d382aafbSBarry Smith 2758d382aafbSBarry Smith /*E 2759d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2760d382aafbSBarry Smith 2761d382aafbSBarry Smith Level: beginner 2762d382aafbSBarry Smith 2763d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2764d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2765d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2766d382aafbSBarry Smith E*/ 27676fbadbe2SMatthew G Knepley typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode; 2768d382aafbSBarry Smith 2769d382aafbSBarry Smith /*MC 2770d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2771d382aafbSBarry Smith 2772d382aafbSBarry Smith Level: beginner 2773d382aafbSBarry Smith 2774d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2775eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2776eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2777d382aafbSBarry Smith 2778d382aafbSBarry Smith M*/ 2779d382aafbSBarry Smith 2780d382aafbSBarry Smith /*MC 2781d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2782d382aafbSBarry Smith value into that location 2783d382aafbSBarry Smith 2784d382aafbSBarry Smith Level: beginner 2785d382aafbSBarry Smith 2786d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2787eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2788eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2789d382aafbSBarry Smith 2790d382aafbSBarry Smith M*/ 2791d382aafbSBarry Smith 2792d382aafbSBarry Smith /*MC 2793d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2794d382aafbSBarry Smith 2795d382aafbSBarry Smith Level: beginner 2796d382aafbSBarry Smith 2797d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2798d382aafbSBarry Smith 2799d382aafbSBarry Smith M*/ 2800d382aafbSBarry Smith 2801ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2802ce94432eSBarry Smith 280345487dadSJed Brown typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 280445487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 280545487dadSJed Brown 2806d382aafbSBarry Smith /*S 2807306c2d5bSBarry Smith PetscSubcomm - A decomposition of an MPI communicator into subcommunicators 2808306c2d5bSBarry Smith 2809306c2d5bSBarry Smith Notes: After a call to PetscSubcommSetType(), PetscSubcommSetTypeGeneral(), or PetscSubcommSetFromOptions() one may call 2810306c2d5bSBarry Smith $ PetscSubcommChild() returns the associated subcommunicator on this process 281136be1a5eSBarry Smith $ PetscSubcommContiguousParent() returns a parent communitor but with all child of the same subcommunicator having contiquous rank 2812306c2d5bSBarry Smith 2813306c2d5bSBarry Smith Sample Usage: 2814306c2d5bSBarry Smith PetscSubcommCreate() 2815306c2d5bSBarry Smith PetscSubcommSetNumber() 2816306c2d5bSBarry Smith PetscSubcommSetType(PETSC_SUBCOMM_INTERLACED); 2817306c2d5bSBarry Smith ccomm = PetscSubcommChild() 2818306c2d5bSBarry Smith PetscSubcommDestroy() 2819d382aafbSBarry Smith 2820d382aafbSBarry Smith Level: advanced 2821d382aafbSBarry Smith 2822d382aafbSBarry Smith Concepts: communicator, create 2823306c2d5bSBarry Smith 2824306c2d5bSBarry Smith Notes: 2825306c2d5bSBarry Smith $ PETSC_SUBCOMM_GENERAL - similar to MPI_Comm_split() each process sets the new communicator (color) they will belong to and the order within that communicator 2826306c2d5bSBarry Smith $ PETSC_SUBCOMM_CONTIGUOUS - each new communicator contains a set of process with contiquous ranks in the original MPI communicator 2827306c2d5bSBarry Smith $ PETSC_SUBCOMM_INTERLACED - each new communictor contains a set of processes equally far apart in rank from the others in that new communicator 2828306c2d5bSBarry Smith 2829306c2d5bSBarry Smith Examaple: Consider a communicator with six processes split into 3 subcommunicators. 2830306c2d5bSBarry Smith $ PETSC_SUBCOMM_CONTIGUOUS - the first communicator contains rank 0,1 the second rank 2,3 and the third rank 4,5 in the original ordering of the original communicator 2831306c2d5bSBarry Smith $ PETSC_SUBCOMM_INTERLACED - the first communicator contains rank 0,3, the second 1,4 and the third 2,5 2832306c2d5bSBarry Smith 2833306c2d5bSBarry Smith Developer Notes: This is used in objects such as PCREDUNDANT() to manage the subcommunicators on which the redundant computations 2834306c2d5bSBarry Smith are performed. 2835306c2d5bSBarry Smith 2836306c2d5bSBarry Smith 2837306c2d5bSBarry Smith .seealso: PetscSubcommCreate(), PetscSubcommSetNumber(), PetscSubcommSetType(), PetscSubcommView(), PetscSubcommSetFromOptions() 2838306c2d5bSBarry Smith 2839d382aafbSBarry Smith S*/ 2840d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2841d382aafbSBarry Smith 2842d382aafbSBarry Smith struct _n_PetscSubcomm { 2843d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2844d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2845306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 284645487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 284745487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2848708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 284945487dadSJed Brown PetscSubcommType type; 2850e5acf8a4SHong Zhang char *subcommprefix; 2851d382aafbSBarry Smith }; 2852d382aafbSBarry Smith 2853c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2854306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 285536be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2856014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2857014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2858014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2859014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 286065d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2861053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2862f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2863e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2864d382aafbSBarry Smith 28650f453b92SJed Brown /*S 28660f453b92SJed Brown PetscSegBuffer - a segmented extendable buffer 28670f453b92SJed Brown 28680f453b92SJed Brown Level: developer 28690f453b92SJed Brown 28700f453b92SJed Brown .seealso: PetscSegBufferCreate(), PetscSegBufferGet(), PetscSegBufferExtract(), PetscSegBufferDestroy() 28710f453b92SJed Brown S*/ 28720f453b92SJed Brown typedef struct _n_PetscSegBuffer *PetscSegBuffer; 287313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 28740f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 287513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2876137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2877137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2878137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 287913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 288013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 28810f453b92SJed Brown 2882471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2883471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2884471ecdacSJed Brown * possible. */ 288535005c2bSLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,(size_t)count,(void**)slot);} 2886d382aafbSBarry Smith 28879de0f6ecSBarry Smith typedef struct _n_PetscOptionsHelpPrinted *PetscOptionsHelpPrinted; 28889de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 28899de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 28909de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 28919de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 28929de0f6ecSBarry Smith 2893268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 28941f817a21SBarry Smith #undef __FUNCT__ 28951f817a21SBarry Smith #define __FUNCT__ "PetscCitationsRegister" 28961f817a21SBarry Smith /*@C 28971f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 28981f817a21SBarry Smith 28991f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 29001f817a21SBarry Smith 29011f817a21SBarry Smith Input Parameters: 29021f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 29031f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 29041f817a21SBarry Smith 2905850545d0SSatish Balay Level: intermediate 2906850545d0SSatish Balay 29071f817a21SBarry Smith Options Database: 29081f817a21SBarry Smith . -citations [filenmae] - print out the bibtex entries for the given computation 29091f817a21SBarry Smith @*/ 2910dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2911dff31646SBarry Smith { 2912dff31646SBarry Smith size_t len; 2913dff31646SBarry Smith char *vstring; 2914dff31646SBarry Smith PetscErrorCode ierr; 2915dff31646SBarry Smith 29161f817a21SBarry Smith PetscFunctionBegin; 29178d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2918dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 291935005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2920dff31646SBarry Smith ierr = PetscMemcpy(vstring,cit,len);CHKERRQ(ierr); 2921dff31646SBarry Smith if (set) *set = PETSC_TRUE; 29221f817a21SBarry Smith PetscFunctionReturn(0); 2923dff31646SBarry Smith } 2924dff31646SBarry Smith 2925b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2926fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2927fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2928f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2929fe278a28SBarry Smith 2930f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2931f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2932b967cddfSBarry Smith 293304102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2934dff31646SBarry Smith 293568e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 29365dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2937d382aafbSBarry Smith 2938b2566f29SBarry Smith 2939b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2940b2566f29SBarry Smith /* 2941b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2942b2566f29SBarry Smith */ 29438f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 2944b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,__FUNCT__,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2945b2566f29SBarry Smith #else 2946b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2947b2566f29SBarry Smith #endif 2948b2566f29SBarry Smith 2949d382aafbSBarry Smith /* Reset __FUNCT__ in case the user does not define it themselves */ 2950d382aafbSBarry Smith #undef __FUNCT__ 2951d382aafbSBarry Smith #define __FUNCT__ "User provided function" 2952d382aafbSBarry Smith 2953d382aafbSBarry Smith #endif 2954