1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1705035670SJunchao Zhang #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1805035670SJunchao Zhang #define PETSC_HAVE_DEVICE 1905035670SJunchao Zhang #endif 2005035670SJunchao Zhang 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith /* 442c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 45d382aafbSBarry Smith */ 461ec50b02SJed Brown #if defined(__cplusplus) 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 481ec50b02SJed Brown #else 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 501ec50b02SJed Brown #endif 51d382aafbSBarry Smith 52c5e4d11fSDmitry Karpeev /* ========================================================================== */ 53c5e4d11fSDmitry Karpeev /* 54c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 551cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 561cc8b206SBarry Smith file within an extern "C". 57c5e4d11fSDmitry Karpeev */ 58c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 59c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 60c5e4d11fSDmitry Karpeev #endif 61c5e4d11fSDmitry Karpeev 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ed938b00SJed Brown #if defined(__cplusplus) 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 70ed938b00SJed Brown #else 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 72ed938b00SJed Brown #endif 73ed938b00SJed Brown 7458c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7558c433abSLisandro Dalcin 76ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 77014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 78014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8126703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8226703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8326703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 85014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 86014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 88d382aafbSBarry Smith #else 89014dd563SJed Brown # define PETSC_DLLEXPORT 90014dd563SJed Brown # define PETSC_DLLIMPORT 9121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 92014dd563SJed Brown #endif 93014dd563SJed Brown 94014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 96014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 98014dd563SJed Brown #endif 99014dd563SJed Brown 1001cc8b206SBarry Smith /* 1011cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1021cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1031cc8b206SBarry Smith used from C and are always visible in the shared libraries 1041cc8b206SBarry Smith */ 1052c280183SJed Brown #if defined(__cplusplus) 106014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10821f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 109014dd563SJed Brown #else 110014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 111638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1126258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 113d382aafbSBarry Smith #endif 11427710113SBarry Smith 1152c8e378dSBarry Smith #include <petscversion.h> 116a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 117d382aafbSBarry Smith 118d382aafbSBarry Smith /* ========================================================================== */ 119d382aafbSBarry Smith 120d382aafbSBarry Smith /* 121d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 122d382aafbSBarry Smith 123d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 124d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 125d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 126d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 127d382aafbSBarry Smith mpicxx.h directly in their code 128d382aafbSBarry Smith */ 129fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 130d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 131fa9e63e2SJed Brown #endif 132fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 133d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 134fa9e63e2SJed Brown #endif 135e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 136e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 137e771154cSJed Brown #else 1382c8e378dSBarry Smith # include <mpi.h> 139e771154cSJed Brown #endif 14065013866SBarry Smith 1414e1ad211SJed Brown /*MC 1424e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1434e1ad211SJed Brown 1444e1ad211SJed Brown Notes: 1454e1ad211SJed Brown Typical usage is within normal code, 1464e1ad211SJed Brown 1474e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1484e1ad211SJed Brown 1494e1ad211SJed Brown but can also be used in the preprocessor, 1504e1ad211SJed Brown 1514e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1524e1ad211SJed Brown $ ... 1534e1ad211SJed Brown $ #else 1544e1ad211SJed Brown 1554e1ad211SJed Brown Either way evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1) or undefined. This macro 1564e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1574e1ad211SJed Brown 1584e1ad211SJed Brown Developer Notes: 1594e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1604e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1614e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1624e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1634e1ad211SJed Brown 1644e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1654e1ad211SJed Brown implementation of variadic macros. 1664e1ad211SJed Brown 1674e1ad211SJed Brown Level: developer 1684e1ad211SJed Brown M*/ 1694e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1704e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1714e1ad211SJed Brown # define PetscDefined_arg_ shift, 1724e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1734e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1744e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1754e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1764e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1774e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1784e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1794e1ad211SJed Brown #endif 1804e1ad211SJed Brown 181d382aafbSBarry Smith /* 182a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 183a7886beaSBarry Smith This usually happens because 184a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 185a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 186a7886beaSBarry Smith */ 187a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 188c9b973beSBarry Smith # if !defined(MPIUNI_H) 189a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 190a7886beaSBarry Smith # endif 19141f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 19241f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 19341f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 19441f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 19541f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 19641f4af4cSSatish Balay # endif 19741f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 19841f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 19941f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 20041f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 20141f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 20241f4af4cSSatish Balay # endif 203a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 20441f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 205a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 206ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 207a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 208a7886beaSBarry Smith # endif 209a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 210a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 211a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 212ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 213c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 214a7886beaSBarry Smith # endif 215d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 216d97fd468SStefano Zampini # if !defined(MSMPI_VER) 217d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 218d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 219d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 220d97fd468SStefano Zampini # endif 221d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 222d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 223a7886beaSBarry Smith #endif 224a7886beaSBarry Smith 225a7886beaSBarry Smith /* 2262981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 227d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 228d382aafbSBarry Smith */ 229d382aafbSBarry Smith #include <stdio.h> 230d382aafbSBarry Smith 231d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 232d382aafbSBarry Smith #if !defined(MPIAPI) 233d382aafbSBarry Smith #define MPIAPI 234d382aafbSBarry Smith #endif 235d382aafbSBarry Smith 2361cc8b206SBarry Smith /* 2371cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2381cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2391cc8b206SBarry Smith does not match the actual type of the argument being passed in 2401cc8b206SBarry Smith */ 241c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 242894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 243894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2448ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2458ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 246894dd566SJed Brown # endif 247894dd566SJed Brown #endif 248894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 249894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2508ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2518ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 252894dd566SJed Brown #endif 253b3506946SBarry Smith 2545a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 255df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 256e28ce29aSPatrick Sanan 257e28ce29aSPatrick Sanan /*MC 258e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 259e28ce29aSPatrick Sanan 260e28ce29aSPatrick Sanan Notes: 261e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 262e28ce29aSPatrick Sanan 263e28ce29aSPatrick Sanan Level: beginner 264e28ce29aSPatrick Sanan 265e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 266e28ce29aSPatrick Sanan M*/ 267e28ce29aSPatrick Sanan 26837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 269bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 270a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 271fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 272bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 273a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 274f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 275bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 276a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 277236ed0a3SSatish Balay #else 278bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 279236ed0a3SSatish Balay #endif 280b7b8f77aSBarry Smith 2817cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 282b7b8f77aSBarry Smith 283d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 284bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 285a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 286d382aafbSBarry Smith #else 287d382aafbSBarry Smith # define MPIU_INT MPI_INT 288a05e1a72SSatish Balay # define PetscInt_FMT "d" 289d382aafbSBarry Smith #endif 290d382aafbSBarry Smith 291503cfb0cSBarry Smith /* 292503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 293503cfb0cSBarry Smith */ 294e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 295d382aafbSBarry Smith 296d382aafbSBarry Smith /* 297d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 298d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 299d382aafbSBarry Smith */ 300014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 301d382aafbSBarry Smith 302d382aafbSBarry Smith /* 303d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 304d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 305d382aafbSBarry Smith */ 306014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 307d382aafbSBarry Smith 308d382aafbSBarry Smith /*MC 309d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 310d382aafbSBarry Smith 311d382aafbSBarry Smith Synopsis: 312aaa7dc30SBarry Smith #include <petscsys.h> 313ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 314d382aafbSBarry Smith 315eca87e8dSBarry Smith Not Collective 316eca87e8dSBarry Smith 317d382aafbSBarry Smith Input Parameters: 318d382aafbSBarry Smith . cond - condition or expression 319d382aafbSBarry Smith 320e28ce29aSPatrick Sanan Notes: 321e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 322d382aafbSBarry Smith branch is unlikely. 323d382aafbSBarry Smith 324d382aafbSBarry Smith Level: advanced 325d382aafbSBarry Smith 326cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 327d382aafbSBarry Smith M*/ 328d382aafbSBarry Smith 329d382aafbSBarry Smith /*MC 330d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 331d382aafbSBarry Smith 332d382aafbSBarry Smith Synopsis: 333aaa7dc30SBarry Smith #include <petscsys.h> 33423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 335d382aafbSBarry Smith 336eca87e8dSBarry Smith Not Collective 337eca87e8dSBarry Smith 338d382aafbSBarry Smith Input Parameters: 339d382aafbSBarry Smith . cond - condition or expression 340d382aafbSBarry Smith 341e28ce29aSPatrick Sanan Notes: 342e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 343d382aafbSBarry Smith branch is likely. 344d382aafbSBarry Smith 345d382aafbSBarry Smith Level: advanced 346d382aafbSBarry Smith 347d382aafbSBarry Smith .seealso: PetscUnlikely() 348d382aafbSBarry Smith M*/ 349d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 350d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 351d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 352d382aafbSBarry Smith #else 353cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 354cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 355d382aafbSBarry Smith #endif 356d382aafbSBarry Smith 357cf9c20a2SJed Brown /*MC 358cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 359cf9c20a2SJed Brown 360cf9c20a2SJed Brown Synopsis: 361cf9c20a2SJed Brown #include <petscsys.h> 362cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 363cf9c20a2SJed Brown 364cf9c20a2SJed Brown Not Collective 365cf9c20a2SJed Brown 366cf9c20a2SJed Brown Input Parameters: 367cf9c20a2SJed Brown . cond - condition or expression 368cf9c20a2SJed Brown 369cf9c20a2SJed Brown Notes: 370cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 371cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 372cf9c20a2SJed Brown 373cf9c20a2SJed Brown Level: advanced 374cf9c20a2SJed Brown 375cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 376cf9c20a2SJed Brown M*/ 377cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 378cf9c20a2SJed Brown 379d382aafbSBarry Smith /* 380d382aafbSBarry Smith Declare extern C stuff after including external header files 381d382aafbSBarry Smith */ 382d382aafbSBarry Smith 3836a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 38470b3c8c7SBarry Smith 3858b49ba18SBarry Smith /* 386390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 3878b49ba18SBarry Smith */ 3888b49ba18SBarry Smith #include <petscmath.h> 3898b49ba18SBarry Smith 3906a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 391d382aafbSBarry Smith 392d382aafbSBarry Smith /*MC 3930298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 394d382aafbSBarry Smith 395d382aafbSBarry Smith Level: beginner 396d382aafbSBarry Smith 397e28ce29aSPatrick Sanan Note: 398e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 399d382aafbSBarry Smith some default 400d382aafbSBarry Smith 401e28ce29aSPatrick Sanan Fortran Notes: 402e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 403d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 404d382aafbSBarry Smith 405e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 406d382aafbSBarry Smith 407d382aafbSBarry Smith M*/ 4080298fd71SBarry Smith #define PETSC_IGNORE NULL 409d382aafbSBarry Smith 410c528d872SBarry Smith /* This is deprecated */ 411c528d872SBarry Smith #define PETSC_NULL NULL 412c528d872SBarry Smith 413d382aafbSBarry Smith /*MC 414557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 415557d4da8SBarry Smith where you wish PETSc to use the default. 416557d4da8SBarry Smith 417557d4da8SBarry Smith Level: beginner 418557d4da8SBarry Smith 419e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 420557d4da8SBarry Smith 421557d4da8SBarry Smith M*/ 422557d4da8SBarry Smith #define PETSC_DECIDE -1 423557d4da8SBarry Smith 424557d4da8SBarry Smith /*MC 425d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 426d382aafbSBarry Smith where you wish PETSc to compute the required value. 427d382aafbSBarry Smith 428d382aafbSBarry Smith Level: beginner 429d382aafbSBarry Smith 430e28ce29aSPatrick Sanan Developer Note: 431e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 432557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 433557d4da8SBarry Smith 4340298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 435d382aafbSBarry Smith 436d382aafbSBarry Smith M*/ 437d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 438d382aafbSBarry Smith 439d382aafbSBarry Smith /*MC 440557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 441557d4da8SBarry Smith where you wish PETSc to use the default. 442557d4da8SBarry Smith 443557d4da8SBarry Smith Level: beginner 444557d4da8SBarry Smith 445e28ce29aSPatrick Sanan Fortran Notes: 446e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 447557d4da8SBarry Smith 4480298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 449557d4da8SBarry Smith 450557d4da8SBarry Smith M*/ 451557d4da8SBarry Smith #define PETSC_DEFAULT -2 452557d4da8SBarry Smith 453557d4da8SBarry Smith /*MC 454d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 455ea8fe74dSBarry Smith all the processes that PETSc knows about. 456d382aafbSBarry Smith 457d382aafbSBarry Smith Level: beginner 458d382aafbSBarry Smith 459e28ce29aSPatrick Sanan Notes: 460e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 461d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 462d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 463a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 464a990b902SBarry Smith 465a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 466a990b902SBarry Smith is called because it may not have a valid value yet. 467d382aafbSBarry Smith 468d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 469d382aafbSBarry Smith 470d382aafbSBarry Smith M*/ 471014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 472d382aafbSBarry Smith 473d382aafbSBarry Smith /*MC 474503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 475d382aafbSBarry Smith 476d382aafbSBarry Smith Level: beginner 477d382aafbSBarry Smith 478e28ce29aSPatrick Sanan Notes: 479e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 480a990b902SBarry Smith 481d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 482d382aafbSBarry Smith 483d382aafbSBarry Smith M*/ 484d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 485d382aafbSBarry Smith 4866de5d289SStefano Zampini /*MC 4876de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 4886de5d289SStefano Zampini MPI with MPI_Init_thread. 4896de5d289SStefano Zampini 4906de5d289SStefano Zampini Level: beginner 4916de5d289SStefano Zampini 4926de5d289SStefano Zampini Notes: 4936de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 4946de5d289SStefano Zampini 4956de5d289SStefano Zampini .seealso: PetscInitialize() 4966de5d289SStefano Zampini 4976de5d289SStefano Zampini M*/ 4986de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 4996de5d289SStefano Zampini 500d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5018ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 502014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 503014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5044cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 505d382aafbSBarry Smith 506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 509d382aafbSBarry Smith 5107381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 51105035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 512cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 513*3c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5147381773fSBarry Smith #endif 5157381773fSBarry Smith 51605035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 51705035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 51805035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 519*3c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 52005035670SJunchao Zhang #endif 52105035670SJunchao Zhang 522540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 523540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 524540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 525540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 526540e20f2SPierre Jolivet #endif 527540e20f2SPierre Jolivet 528d382aafbSBarry Smith /*MC 52995dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 530d382aafbSBarry Smith 531eca87e8dSBarry Smith Synopsis: 532aaa7dc30SBarry Smith #include <petscsys.h> 533eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 534eca87e8dSBarry Smith 535eca87e8dSBarry Smith Not Collective 536eca87e8dSBarry Smith 537d382aafbSBarry Smith Input Parameter: 538d382aafbSBarry Smith . m - number of bytes to allocate 539d382aafbSBarry Smith 540d382aafbSBarry Smith Output Parameter: 541d382aafbSBarry Smith . result - memory allocated 542d382aafbSBarry Smith 543d382aafbSBarry Smith Level: beginner 544d382aafbSBarry Smith 54549d7da52SJed Brown Notes: 54649d7da52SJed Brown Memory is always allocated at least double aligned 547d382aafbSBarry Smith 54849d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 549d382aafbSBarry Smith 550d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 551d382aafbSBarry Smith 552d382aafbSBarry Smith M*/ 553071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 554d382aafbSBarry Smith 555d382aafbSBarry Smith /*MC 5563221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5573221ece2SMatthew G. Knepley 5583221ece2SMatthew G. Knepley Synopsis: 5593221ece2SMatthew G. Knepley #include <petscsys.h> 5603221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5613221ece2SMatthew G. Knepley 5623221ece2SMatthew G. Knepley Not Collective 5633221ece2SMatthew G. Knepley 5643221ece2SMatthew G. Knepley Input Parameters: 5653221ece2SMatthew G. Knepley + m - number of bytes to allocate 56692f119d6SBarry Smith - result - previous memory 5673221ece2SMatthew G. Knepley 5683221ece2SMatthew G. Knepley Output Parameter: 5693221ece2SMatthew G. Knepley . result - new memory allocated 5703221ece2SMatthew G. Knepley 5713221ece2SMatthew G. Knepley Level: developer 5723221ece2SMatthew G. Knepley 5733221ece2SMatthew G. Knepley Notes: 5743221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 5753221ece2SMatthew G. Knepley 5763221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 5773221ece2SMatthew G. Knepley 5783221ece2SMatthew G. Knepley M*/ 5793221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 5803221ece2SMatthew G. Knepley 5813221ece2SMatthew G. Knepley /*MC 582503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 583d382aafbSBarry Smith 584d382aafbSBarry Smith Synopsis: 585aaa7dc30SBarry Smith #include <petscsys.h> 586d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 587d382aafbSBarry Smith 588eca87e8dSBarry Smith Not Collective 589eca87e8dSBarry Smith 590eca87e8dSBarry Smith Input Parameters: 591eca87e8dSBarry Smith . addr - address to align (any pointer type) 592eca87e8dSBarry Smith 593d382aafbSBarry Smith Level: developer 594d382aafbSBarry Smith 595d382aafbSBarry Smith .seealso: PetscMallocAlign() 596d382aafbSBarry Smith 597d382aafbSBarry Smith M*/ 598d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 599d382aafbSBarry Smith 600d382aafbSBarry Smith /*MC 601785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 602d382aafbSBarry Smith 603eca87e8dSBarry Smith Synopsis: 604aaa7dc30SBarry Smith #include <petscsys.h> 605785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 606785e854fSJed Brown 607785e854fSJed Brown Not Collective 608785e854fSJed Brown 609785e854fSJed Brown Input Parameter: 610390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 611785e854fSJed Brown 612785e854fSJed Brown Output Parameter: 6131fe1b817SJunchao Zhang . r1 - memory allocated 614785e854fSJed Brown 615e28ce29aSPatrick Sanan Note: 616e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 617390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 618390e1bf2SBarry Smith $ PetscInt *id; 619390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 620390e1bf2SBarry Smith not 621390e1bf2SBarry Smith $ PetscInt *id; 622390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 623390e1bf2SBarry Smith 6241fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 625390e1bf2SBarry Smith 626390e1bf2SBarry Smith Level: beginner 627785e854fSJed Brown 6281795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 629785e854fSJed Brown 630785e854fSJed Brown M*/ 6312553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 632785e854fSJed Brown 633785e854fSJed Brown /*MC 6341795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6351795a4d1SJed Brown 6361795a4d1SJed Brown Synopsis: 637aaa7dc30SBarry Smith #include <petscsys.h> 6381795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6391795a4d1SJed Brown 6401795a4d1SJed Brown Not Collective 6411795a4d1SJed Brown 6421795a4d1SJed Brown Input Parameter: 6431795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6441795a4d1SJed Brown 6451795a4d1SJed Brown Output Parameter: 6461fe1b817SJunchao Zhang . r1 - memory allocated 6471795a4d1SJed Brown 648e28ce29aSPatrick Sanan Notes: 649e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 650390e1bf2SBarry Smith 651390e1bf2SBarry Smith Level: beginner 6521795a4d1SJed Brown 6531795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6541795a4d1SJed Brown 6551795a4d1SJed Brown M*/ 6562553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 6571795a4d1SJed Brown 6581795a4d1SJed Brown /*MC 659dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 660d382aafbSBarry Smith 661eca87e8dSBarry Smith Synopsis: 662aaa7dc30SBarry Smith #include <petscsys.h> 663dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 664eca87e8dSBarry Smith 665eca87e8dSBarry Smith Not Collective 666eca87e8dSBarry Smith 667d382aafbSBarry Smith Input Parameter: 668d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 669dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 670d382aafbSBarry Smith 671d382aafbSBarry Smith Output Parameter: 672d382aafbSBarry Smith + r1 - memory allocated in first chunk 673d382aafbSBarry Smith - r2 - memory allocated in second chunk 674d382aafbSBarry Smith 675d382aafbSBarry Smith Level: developer 676d382aafbSBarry Smith 6771795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 678d382aafbSBarry Smith 679d382aafbSBarry Smith M*/ 6802553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 681d382aafbSBarry Smith 682d382aafbSBarry Smith /*MC 6831795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 684d382aafbSBarry Smith 685eca87e8dSBarry Smith Synopsis: 686aaa7dc30SBarry Smith #include <petscsys.h> 6871795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 688eca87e8dSBarry Smith 689eca87e8dSBarry Smith Not Collective 690eca87e8dSBarry Smith 691d382aafbSBarry Smith Input Parameter: 692d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 6931795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 6941795a4d1SJed Brown 6951795a4d1SJed Brown Output Parameter: 6961795a4d1SJed Brown + r1 - memory allocated in first chunk 6971795a4d1SJed Brown - r2 - memory allocated in second chunk 6981795a4d1SJed Brown 6991795a4d1SJed Brown Level: developer 7001795a4d1SJed Brown 7011795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7021795a4d1SJed Brown 7031795a4d1SJed Brown M*/ 7042553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7051795a4d1SJed Brown 7061795a4d1SJed Brown /*MC 707dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 708d382aafbSBarry Smith 709d382aafbSBarry Smith Synopsis: 710aaa7dc30SBarry Smith #include <petscsys.h> 711dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 712d382aafbSBarry Smith 713d382aafbSBarry Smith Not Collective 714d382aafbSBarry Smith 715d382aafbSBarry Smith Input Parameter: 716d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 717d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 718dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 719d382aafbSBarry Smith 720d382aafbSBarry Smith Output Parameter: 721d382aafbSBarry Smith + r1 - memory allocated in first chunk 722d382aafbSBarry Smith . r2 - memory allocated in second chunk 723d382aafbSBarry Smith - r3 - memory allocated in third chunk 724d382aafbSBarry Smith 725d382aafbSBarry Smith Level: developer 726d382aafbSBarry Smith 7271795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 728d382aafbSBarry Smith 729d382aafbSBarry Smith M*/ 7302553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 731d382aafbSBarry Smith 732d382aafbSBarry Smith /*MC 7331795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 734d382aafbSBarry Smith 735eca87e8dSBarry Smith Synopsis: 736aaa7dc30SBarry Smith #include <petscsys.h> 7371795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 738eca87e8dSBarry Smith 739eca87e8dSBarry Smith Not Collective 740eca87e8dSBarry Smith 741d382aafbSBarry Smith Input Parameter: 742d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 743d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7441795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7451795a4d1SJed Brown 7461795a4d1SJed Brown Output Parameter: 7471795a4d1SJed Brown + r1 - memory allocated in first chunk 7481795a4d1SJed Brown . r2 - memory allocated in second chunk 7491795a4d1SJed Brown - r3 - memory allocated in third chunk 7501795a4d1SJed Brown 7511795a4d1SJed Brown Level: developer 7521795a4d1SJed Brown 7531795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7541795a4d1SJed Brown 7551795a4d1SJed Brown M*/ 7562553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 7571795a4d1SJed Brown 7581795a4d1SJed Brown /*MC 759dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 760d382aafbSBarry Smith 761d382aafbSBarry Smith Synopsis: 762aaa7dc30SBarry Smith #include <petscsys.h> 763dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 764d382aafbSBarry Smith 765d382aafbSBarry Smith Not Collective 766d382aafbSBarry Smith 767d382aafbSBarry Smith Input Parameter: 768d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 769d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 770d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 771dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 772d382aafbSBarry Smith 773d382aafbSBarry Smith Output Parameter: 774d382aafbSBarry Smith + r1 - memory allocated in first chunk 775d382aafbSBarry Smith . r2 - memory allocated in second chunk 776d382aafbSBarry Smith . r3 - memory allocated in third chunk 777d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 778d382aafbSBarry Smith 779d382aafbSBarry Smith Level: developer 780d382aafbSBarry Smith 7811795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 782d382aafbSBarry Smith 783d382aafbSBarry Smith M*/ 7842553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 785d382aafbSBarry Smith 786d382aafbSBarry Smith /*MC 7871795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 788d382aafbSBarry Smith 789eca87e8dSBarry Smith Synopsis: 790aaa7dc30SBarry Smith #include <petscsys.h> 7911795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 792eca87e8dSBarry Smith 793eca87e8dSBarry Smith Not Collective 794eca87e8dSBarry Smith 795e28ce29aSPatrick Sanan Input Parameters: 796d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 797d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 798d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 7991795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8001795a4d1SJed Brown 801e28ce29aSPatrick Sanan Output Parameters: 8021795a4d1SJed Brown + r1 - memory allocated in first chunk 8031795a4d1SJed Brown . r2 - memory allocated in second chunk 8041795a4d1SJed Brown . r3 - memory allocated in third chunk 8051795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8061795a4d1SJed Brown 8071795a4d1SJed Brown Level: developer 8081795a4d1SJed Brown 8091795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8101795a4d1SJed Brown 8111795a4d1SJed Brown M*/ 8122553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8131795a4d1SJed Brown 8141795a4d1SJed Brown /*MC 815dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 816d382aafbSBarry Smith 817d382aafbSBarry Smith Synopsis: 818aaa7dc30SBarry Smith #include <petscsys.h> 819dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 820d382aafbSBarry Smith 821d382aafbSBarry Smith Not Collective 822d382aafbSBarry Smith 823e28ce29aSPatrick Sanan Input Parameters: 824d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 825d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 826d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 827d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 828dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 829d382aafbSBarry Smith 830e28ce29aSPatrick Sanan Output Parameters: 831d382aafbSBarry Smith + r1 - memory allocated in first chunk 832d382aafbSBarry Smith . r2 - memory allocated in second chunk 833d382aafbSBarry Smith . r3 - memory allocated in third chunk 834d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 835d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 836d382aafbSBarry Smith 837d382aafbSBarry Smith Level: developer 838d382aafbSBarry Smith 8391795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 840d382aafbSBarry Smith 841d382aafbSBarry Smith M*/ 8422553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 843d382aafbSBarry Smith 844d382aafbSBarry Smith /*MC 8451795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 846d382aafbSBarry Smith 847eca87e8dSBarry Smith Synopsis: 848aaa7dc30SBarry Smith #include <petscsys.h> 8491795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 850eca87e8dSBarry Smith 851eca87e8dSBarry Smith Not Collective 852eca87e8dSBarry Smith 853e28ce29aSPatrick Sanan Input Parameters: 854d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 855d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 856d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 857d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 8581795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 8591795a4d1SJed Brown 860e28ce29aSPatrick Sanan Output Parameters: 8611795a4d1SJed Brown + r1 - memory allocated in first chunk 8621795a4d1SJed Brown . r2 - memory allocated in second chunk 8631795a4d1SJed Brown . r3 - memory allocated in third chunk 8641795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8651795a4d1SJed Brown - r5 - memory allocated in fifth chunk 8661795a4d1SJed Brown 8671795a4d1SJed Brown Level: developer 8681795a4d1SJed Brown 8691795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 8701795a4d1SJed Brown 8711795a4d1SJed Brown M*/ 8722553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 873d382aafbSBarry Smith 874d382aafbSBarry Smith /*MC 875dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 876d382aafbSBarry Smith 877d382aafbSBarry Smith Synopsis: 878aaa7dc30SBarry Smith #include <petscsys.h> 879dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 880d382aafbSBarry Smith 881d382aafbSBarry Smith Not Collective 882d382aafbSBarry Smith 883e28ce29aSPatrick Sanan Input Parameters: 884d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 885d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 886d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 887d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 888d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 889dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 890d382aafbSBarry Smith 891e28ce29aSPatrick Sanan Output Parameteasr: 892d382aafbSBarry Smith + r1 - memory allocated in first chunk 893d382aafbSBarry Smith . r2 - memory allocated in second chunk 894d382aafbSBarry Smith . r3 - memory allocated in third chunk 895d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 896d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 897d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 898d382aafbSBarry Smith 899d382aafbSBarry Smith Level: developer 900d382aafbSBarry Smith 9011795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 902d382aafbSBarry Smith 903d382aafbSBarry Smith M*/ 9042553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 905d382aafbSBarry Smith 906d382aafbSBarry Smith /*MC 9071795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 908d382aafbSBarry Smith 909eca87e8dSBarry Smith Synopsis: 910aaa7dc30SBarry Smith #include <petscsys.h> 9111795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 912eca87e8dSBarry Smith 913eca87e8dSBarry Smith Not Collective 914eca87e8dSBarry Smith 915e28ce29aSPatrick Sanan Input Parameters: 916d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 917d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 918d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 919d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 920d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9211795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9221795a4d1SJed Brown 923e28ce29aSPatrick Sanan Output Parameters: 9241795a4d1SJed Brown + r1 - memory allocated in first chunk 9251795a4d1SJed Brown . r2 - memory allocated in second chunk 9261795a4d1SJed Brown . r3 - memory allocated in third chunk 9271795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9281795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9291795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9301795a4d1SJed Brown 9311795a4d1SJed Brown Level: developer 9321795a4d1SJed Brown 9331795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9341795a4d1SJed Brown 9351795a4d1SJed Brown M*/ 9362553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9371795a4d1SJed Brown 9381795a4d1SJed Brown /*MC 939dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 940d382aafbSBarry Smith 941d382aafbSBarry Smith Synopsis: 942aaa7dc30SBarry Smith #include <petscsys.h> 943dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 944d382aafbSBarry Smith 945d382aafbSBarry Smith Not Collective 946d382aafbSBarry Smith 947e28ce29aSPatrick Sanan Input Parameters: 948d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 949d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 950d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 951d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 952d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 953d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 954dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 955d382aafbSBarry Smith 956e28ce29aSPatrick Sanan Output Parameters: 957d382aafbSBarry Smith + r1 - memory allocated in first chunk 958d382aafbSBarry Smith . r2 - memory allocated in second chunk 959d382aafbSBarry Smith . r3 - memory allocated in third chunk 960d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 961d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 962d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 963eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 964d382aafbSBarry Smith 965d382aafbSBarry Smith Level: developer 966d382aafbSBarry Smith 9671795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 968d382aafbSBarry Smith 969d382aafbSBarry Smith M*/ 9702553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 971d382aafbSBarry Smith 972d382aafbSBarry Smith /*MC 9731795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 9741795a4d1SJed Brown 9751795a4d1SJed Brown Synopsis: 976aaa7dc30SBarry Smith #include <petscsys.h> 9771795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 9781795a4d1SJed Brown 9791795a4d1SJed Brown Not Collective 9801795a4d1SJed Brown 981e28ce29aSPatrick Sanan Input Parameters: 9821795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 9831795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 9841795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 9851795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 9861795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 9871795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 9881795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 9891795a4d1SJed Brown 990e28ce29aSPatrick Sanan Output Parameters: 9911795a4d1SJed Brown + r1 - memory allocated in first chunk 9921795a4d1SJed Brown . r2 - memory allocated in second chunk 9931795a4d1SJed Brown . r3 - memory allocated in third chunk 9941795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9951795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9961795a4d1SJed Brown . r6 - memory allocated in sixth chunk 9971795a4d1SJed Brown - r7 - memory allocated in seventh chunk 9981795a4d1SJed Brown 9991795a4d1SJed Brown Level: developer 10001795a4d1SJed Brown 10011795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10021795a4d1SJed Brown 10031795a4d1SJed Brown M*/ 10042553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10051795a4d1SJed Brown 10061795a4d1SJed Brown /*MC 1007503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1008d382aafbSBarry Smith 1009eca87e8dSBarry Smith Synopsis: 1010aaa7dc30SBarry Smith #include <petscsys.h> 1011b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1012eca87e8dSBarry Smith 1013eca87e8dSBarry Smith Not Collective 1014eca87e8dSBarry Smith 1015d382aafbSBarry Smith Output Parameter: 1016b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1017d382aafbSBarry Smith 1018d382aafbSBarry Smith Level: beginner 1019d382aafbSBarry Smith 1020390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1021d382aafbSBarry Smith 1022d382aafbSBarry Smith M*/ 1023b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1024ad0619ddSBarry Smith 1025ad0619ddSBarry Smith /*MC 1026b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1027ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1028ad0619ddSBarry Smith 1029ad0619ddSBarry Smith Synopsis: 1030aaa7dc30SBarry Smith #include <petscsys.h> 1031b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1032ad0619ddSBarry Smith 1033ad0619ddSBarry Smith Not Collective 1034ad0619ddSBarry Smith 1035ad0619ddSBarry Smith Input Parameter: 1036b00a9115SJed Brown . obj - object memory is logged to 1037ad0619ddSBarry Smith 1038ad0619ddSBarry Smith Output Parameter: 1039b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1040ad0619ddSBarry Smith 1041ad0619ddSBarry Smith Level: developer 1042ad0619ddSBarry Smith 1043390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1044ad0619ddSBarry Smith 1045ad0619ddSBarry Smith M*/ 1046d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1047d382aafbSBarry Smith 1048d382aafbSBarry Smith /*MC 1049d382aafbSBarry Smith PetscFree - Frees memory 1050d382aafbSBarry Smith 1051eca87e8dSBarry Smith Synopsis: 1052aaa7dc30SBarry Smith #include <petscsys.h> 1053eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1054eca87e8dSBarry Smith 1055eca87e8dSBarry Smith Not Collective 1056eca87e8dSBarry Smith 1057d382aafbSBarry Smith Input Parameter: 10587f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1059d382aafbSBarry Smith 1060d382aafbSBarry Smith Level: beginner 1061d382aafbSBarry Smith 106249d7da52SJed Brown Notes: 1063390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1064390e1bf2SBarry Smith 106549d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1066d382aafbSBarry Smith 1067390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1068d382aafbSBarry Smith 1069d382aafbSBarry Smith M*/ 1070ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1071d382aafbSBarry Smith 1072d382aafbSBarry Smith /*MC 1073d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1074d382aafbSBarry Smith 1075eca87e8dSBarry Smith Synopsis: 1076aaa7dc30SBarry Smith #include <petscsys.h> 1077eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1078eca87e8dSBarry Smith 1079eca87e8dSBarry Smith Not Collective 1080eca87e8dSBarry Smith 1081e28ce29aSPatrick Sanan Input Parameters: 1082d382aafbSBarry Smith + memory1 - memory to free 1083d382aafbSBarry Smith - memory2 - 2nd memory to free 1084d382aafbSBarry Smith 1085d382aafbSBarry Smith Level: developer 1086d382aafbSBarry Smith 108795452b02SPatrick Sanan Notes: 108895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1089d382aafbSBarry Smith 1090d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1091d382aafbSBarry Smith 1092d382aafbSBarry Smith M*/ 1093ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1094d382aafbSBarry Smith 1095d382aafbSBarry Smith /*MC 1096d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1097d382aafbSBarry Smith 1098eca87e8dSBarry Smith Synopsis: 1099aaa7dc30SBarry Smith #include <petscsys.h> 1100eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1101eca87e8dSBarry Smith 1102eca87e8dSBarry Smith Not Collective 1103eca87e8dSBarry Smith 1104e28ce29aSPatrick Sanan Input Parameters: 1105d382aafbSBarry Smith + memory1 - memory to free 1106d382aafbSBarry Smith . memory2 - 2nd memory to free 1107d382aafbSBarry Smith - memory3 - 3rd memory to free 1108d382aafbSBarry Smith 1109d382aafbSBarry Smith Level: developer 1110d382aafbSBarry Smith 111195452b02SPatrick Sanan Notes: 111295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1113d382aafbSBarry Smith 1114d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1115d382aafbSBarry Smith 1116d382aafbSBarry Smith M*/ 1117ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1118d382aafbSBarry Smith 1119d382aafbSBarry Smith /*MC 1120d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1121d382aafbSBarry Smith 1122eca87e8dSBarry Smith Synopsis: 1123aaa7dc30SBarry Smith #include <petscsys.h> 1124eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1125eca87e8dSBarry Smith 1126eca87e8dSBarry Smith Not Collective 1127eca87e8dSBarry Smith 1128e28ce29aSPatrick Sanan Input Parameters: 1129d382aafbSBarry Smith + m1 - memory to free 1130d382aafbSBarry Smith . m2 - 2nd memory to free 1131d382aafbSBarry Smith . m3 - 3rd memory to free 1132d382aafbSBarry Smith - m4 - 4th memory to free 1133d382aafbSBarry Smith 1134d382aafbSBarry Smith Level: developer 1135d382aafbSBarry Smith 113695452b02SPatrick Sanan Notes: 113795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1138d382aafbSBarry Smith 1139d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1140d382aafbSBarry Smith 1141d382aafbSBarry Smith M*/ 1142ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1143d382aafbSBarry Smith 1144d382aafbSBarry Smith /*MC 1145d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1146d382aafbSBarry Smith 1147eca87e8dSBarry Smith Synopsis: 1148aaa7dc30SBarry Smith #include <petscsys.h> 1149eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1150eca87e8dSBarry Smith 1151eca87e8dSBarry Smith Not Collective 1152eca87e8dSBarry Smith 1153e28ce29aSPatrick Sanan Input Parameters: 1154d382aafbSBarry Smith + m1 - memory to free 1155d382aafbSBarry Smith . m2 - 2nd memory to free 1156d382aafbSBarry Smith . m3 - 3rd memory to free 1157d382aafbSBarry Smith . m4 - 4th memory to free 1158d382aafbSBarry Smith - m5 - 5th memory to free 1159d382aafbSBarry Smith 1160d382aafbSBarry Smith Level: developer 1161d382aafbSBarry Smith 116295452b02SPatrick Sanan Notes: 116395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1164d382aafbSBarry Smith 1165d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1166d382aafbSBarry Smith 1167d382aafbSBarry Smith M*/ 1168ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1169d382aafbSBarry Smith 1170d382aafbSBarry Smith /*MC 1171d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1172d382aafbSBarry Smith 1173eca87e8dSBarry Smith Synopsis: 1174aaa7dc30SBarry Smith #include <petscsys.h> 1175eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1176eca87e8dSBarry Smith 1177eca87e8dSBarry Smith Not Collective 1178eca87e8dSBarry Smith 1179e28ce29aSPatrick Sanan Input Parameters: 1180d382aafbSBarry Smith + m1 - memory to free 1181d382aafbSBarry Smith . m2 - 2nd memory to free 1182d382aafbSBarry Smith . m3 - 3rd memory to free 1183d382aafbSBarry Smith . m4 - 4th memory to free 1184d382aafbSBarry Smith . m5 - 5th memory to free 1185d382aafbSBarry Smith - m6 - 6th memory to free 1186d382aafbSBarry Smith 1187d382aafbSBarry Smith 1188d382aafbSBarry Smith Level: developer 1189d382aafbSBarry Smith 119095452b02SPatrick Sanan Notes: 119195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1192d382aafbSBarry Smith 1193d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1194d382aafbSBarry Smith 1195d382aafbSBarry Smith M*/ 1196ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1197d382aafbSBarry Smith 1198d382aafbSBarry Smith /*MC 1199d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1200d382aafbSBarry Smith 1201eca87e8dSBarry Smith Synopsis: 1202aaa7dc30SBarry Smith #include <petscsys.h> 1203eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1204eca87e8dSBarry Smith 1205eca87e8dSBarry Smith Not Collective 1206eca87e8dSBarry Smith 1207e28ce29aSPatrick Sanan Input Parameters: 1208d382aafbSBarry Smith + m1 - memory to free 1209d382aafbSBarry Smith . m2 - 2nd memory to free 1210d382aafbSBarry Smith . m3 - 3rd memory to free 1211d382aafbSBarry Smith . m4 - 4th memory to free 1212d382aafbSBarry Smith . m5 - 5th memory to free 1213d382aafbSBarry Smith . m6 - 6th memory to free 1214d382aafbSBarry Smith - m7 - 7th memory to free 1215d382aafbSBarry Smith 1216d382aafbSBarry Smith 1217d382aafbSBarry Smith Level: developer 1218d382aafbSBarry Smith 121995452b02SPatrick Sanan Notes: 122095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1221d382aafbSBarry Smith 1222d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1223d382aafbSBarry Smith PetscMalloc7() 1224d382aafbSBarry Smith 1225d382aafbSBarry Smith M*/ 1226ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1227d382aafbSBarry Smith 1228ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1229ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1230071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1231efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12323221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1233ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 123492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1236d382aafbSBarry Smith 1237d382aafbSBarry Smith /* 1238c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1239c1706be6SHong Zhang */ 1240c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1241c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 124231f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 124331f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 124431f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 124531f06eaaSHong Zhang #endif 1246c1706be6SHong Zhang 1247a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 124836763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1249a5057860SBarry Smith 1250a5057860SBarry Smith /* 125166d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1252d382aafbSBarry Smith */ 1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 125492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1257e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1258e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 125992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 126092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1261efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 126292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 126392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1264d382aafbSBarry Smith 12656a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 12698e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1270d382aafbSBarry Smith 1271d382aafbSBarry Smith /* 1272d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1273d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1274d382aafbSBarry Smith functionality and/or error checking. 1275d382aafbSBarry Smith */ 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1279d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1287a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 12912f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 12962c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 129947340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13006fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13016991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13026991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1304d382aafbSBarry Smith 1305573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1306573b0fb4SBarry Smith 1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1310d382aafbSBarry Smith 1311e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1312a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1313a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1314a53986e1SJed Brown 1315d382aafbSBarry Smith /* 1316d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1317d382aafbSBarry Smith */ 1318367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1319570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1320014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 13212414b3c7SJed Brown #else 13222414b3c7SJed Brown #define MPIU_SUM MPI_SUM 13232414b3c7SJed Brown #endif 1324570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1325014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1326014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1327d9822059SBarry Smith #else 1328d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1329d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1330d9822059SBarry Smith #endif 1331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1332d382aafbSBarry Smith 1333014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1335eb3f98d2SBarry Smith 133695c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1337d6a4318aSJed Brown 1338639ff905SBarry Smith /* 1339639ff905SBarry Smith Defines PETSc error handling. 1340639ff905SBarry Smith */ 1341639ff905SBarry Smith #include <petscerror.h> 1342d382aafbSBarry Smith 13430700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1344014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1345014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 134781256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 134881256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 134981256985SMatthew G. Knepley 1350d382aafbSBarry Smith 1351d382aafbSBarry Smith /* 1352d382aafbSBarry Smith Routines that get memory usage information from the OS 1353d382aafbSBarry Smith */ 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1357b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1358d382aafbSBarry Smith 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1360d382aafbSBarry Smith 1361d382aafbSBarry Smith /* 1362d382aafbSBarry Smith Initialization of PETSc 1363d382aafbSBarry Smith */ 1364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1374d382aafbSBarry Smith 1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1376607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1377d382aafbSBarry Smith 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1382d382aafbSBarry Smith 1383a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1384a50e088cSMatthew G. Knepley 1385a50e088cSMatthew G. Knepley 1386d382aafbSBarry Smith /* 1387d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 13882981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1389d382aafbSBarry Smith */ 1390638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1391638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1392638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1393d382aafbSBarry Smith 1394d382aafbSBarry Smith /* 1395d382aafbSBarry Smith Functions that can act on any PETSc object. 1396d382aafbSBarry Smith */ 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1415bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1416bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14190eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14200eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1422d382aafbSBarry Smith 1423665c2dedSJed Brown #include <petscviewertypes.h> 1424639ff905SBarry Smith #include <petscoptions.h> 1425639ff905SBarry Smith 14260633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14270633abcbSJed Brown 1428639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1429c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1430dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1431639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14320005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14330005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1441685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 14444099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1446b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1449d382aafbSBarry Smith 1450e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 14517aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1452e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1453e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1454e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1455e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1456e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1457e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1458e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1459e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1460e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 146115681b3cSBarry Smith 1462ec7429eaSBarry Smith #else 14637aab2a10SBarry Smith #define PetscSAWsBlock() 0 1464e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1465e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1466e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1467e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1468e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1469e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1470e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1471e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1472e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 147315681b3cSBarry Smith 1474ec7429eaSBarry Smith #endif 1475b90c6cbeSBarry Smith 147682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 147782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 147882b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 14797d5d4d99SBarry Smith 14805fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1481a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 14825fe58b6fSBarry Smith #endif 14837eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1484a64a8e02SBarry Smith 1485140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1486140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1487140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1488140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1489140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1490140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1491d382aafbSBarry Smith 1492d382aafbSBarry Smith /* 1493503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1494d382aafbSBarry Smith link libraries that will be loaded as needed. 1495d382aafbSBarry Smith */ 1496a240a19fSJed Brown 1497a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1498a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1499140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15001c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15011c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 150244ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1503140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1504140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1505140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1506d382aafbSBarry Smith 1507014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1515d382aafbSBarry Smith 1516d382aafbSBarry Smith /* 1517d382aafbSBarry Smith Useful utility routines 1518d382aafbSBarry Smith */ 1519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1521d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 15266ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 15276ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1528d382aafbSBarry Smith 152964ac3b0dSPatrick Sanan /*MC 1530ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1531503cfb0cSBarry Smith 1532e28ce29aSPatrick Sanan Notes: 1533e28ce29aSPatrick Sanan This is useful in cases like 1534503cfb0cSBarry Smith $ int *a; 1535ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 15361cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 153764ac3b0dSPatrick Sanan 153864ac3b0dSPatrick Sanan Level: beginner 153964ac3b0dSPatrick Sanan 154064ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 154164ac3b0dSPatrick Sanan M*/ 1542d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1543503cfb0cSBarry Smith 1544d382aafbSBarry Smith /*MC 1545d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1546d382aafbSBarry Smith 1547d382aafbSBarry Smith Synopsis: 1548aaa7dc30SBarry Smith #include <petscsys.h> 1549d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1550d382aafbSBarry Smith 1551eca87e8dSBarry Smith Not Collective 1552eca87e8dSBarry Smith 1553d382aafbSBarry Smith Input Parameters: 1554d382aafbSBarry Smith . format - the usual printf() format string 1555d382aafbSBarry Smith 1556d382aafbSBarry Smith Level: developer 1557d382aafbSBarry Smith 1558d382aafbSBarry Smith Fortran Note: 1559d382aafbSBarry Smith This routine is not supported in Fortran. 1560d382aafbSBarry Smith 1561d382aafbSBarry Smith 1562d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1563d382aafbSBarry Smith M*/ 1564014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1565d382aafbSBarry Smith 1566fcfd50ebSBarry Smith /* 1567fcfd50ebSBarry Smith Defines PETSc profiling. 1568fcfd50ebSBarry Smith */ 15692c8e378dSBarry Smith #include <petsclog.h> 1570fcfd50ebSBarry Smith 1571fcfd50ebSBarry Smith /* 1572fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1573fcfd50ebSBarry Smith */ 1574014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 15811b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1582fcfd50ebSBarry Smith 1583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1585014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1586d382aafbSBarry Smith 1587d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1588d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1589d781fa04SBarry Smith 1590d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1592016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 159374ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1594d382aafbSBarry Smith #endif 1595d382aafbSBarry Smith 1596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 15980ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1603d382aafbSBarry Smith 1604014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1610b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1611d382aafbSBarry Smith 1612d382aafbSBarry Smith /* 1613d382aafbSBarry Smith For use in debuggers 1614d382aafbSBarry Smith */ 1615014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1616014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1620d382aafbSBarry Smith 1621a663daf8SBarry Smith #include <stddef.h> 1622a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1623d382aafbSBarry Smith #include <stdlib.h> 16246c7e564aSBarry Smith 16254a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1626d382aafbSBarry Smith #include <xmmintrin.h> 1627d382aafbSBarry Smith #endif 1628d382aafbSBarry Smith 1629d382aafbSBarry Smith /*@C 1630580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1631580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1632580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1633580bdb30SBarry Smith 1634580bdb30SBarry Smith Not Collective 1635580bdb30SBarry Smith 1636580bdb30SBarry Smith Input Parameters: 1637580bdb30SBarry Smith + b - pointer to initial memory space 1638580bdb30SBarry Smith . a - pointer to copy space 1639580bdb30SBarry Smith - n - length (in bytes) of space to copy 1640580bdb30SBarry Smith 1641580bdb30SBarry Smith Level: intermediate 1642580bdb30SBarry Smith 1643580bdb30SBarry Smith Note: 1644857a15f1SBarry Smith PetscArraymove() is preferred 1645580bdb30SBarry Smith This routine is analogous to memmove(). 1646580bdb30SBarry Smith 1647580bdb30SBarry Smith Developers Note: This is inlined for performance 1648580bdb30SBarry Smith 1649580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1650580bdb30SBarry Smith PetscArraymove() 1651580bdb30SBarry Smith @*/ 1652580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1653580bdb30SBarry Smith { 1654580bdb30SBarry Smith PetscFunctionBegin; 1655580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1656580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1657580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1658580bdb30SBarry Smith if (a < b) { 1659580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1660580bdb30SBarry Smith else { 1661580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1662580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1663580bdb30SBarry Smith } 1664580bdb30SBarry Smith } else { 1665580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1666580bdb30SBarry Smith else { 1667580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1668580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1669580bdb30SBarry Smith } 1670580bdb30SBarry Smith } 1671580bdb30SBarry Smith #else 1672580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1673580bdb30SBarry Smith #endif 1674580bdb30SBarry Smith PetscFunctionReturn(0); 1675580bdb30SBarry Smith } 1676580bdb30SBarry Smith 1677d382aafbSBarry Smith /*@C 1678d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1679d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1680d382aafbSBarry Smith PetscMemmove() in that case. 1681d382aafbSBarry Smith 1682d382aafbSBarry Smith Not Collective 1683d382aafbSBarry Smith 1684d382aafbSBarry Smith Input Parameters: 1685d382aafbSBarry Smith + b - pointer to initial memory space 1686d382aafbSBarry Smith - n - length (in bytes) of space to copy 1687d382aafbSBarry Smith 1688d382aafbSBarry Smith Output Parameter: 1689d382aafbSBarry Smith . a - pointer to copy space 1690d382aafbSBarry Smith 1691d382aafbSBarry Smith Level: intermediate 1692d382aafbSBarry Smith 1693d382aafbSBarry Smith Compile Option: 1694d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1695d382aafbSBarry Smith for memory copies on double precision values. 1696d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1697d382aafbSBarry Smith for memory copies on double precision values. 1698d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1699d382aafbSBarry Smith for memory copies on double precision values. 1700d382aafbSBarry Smith 1701d382aafbSBarry Smith Note: 1702580bdb30SBarry Smith Prefer PetscArraycpy() 1703d382aafbSBarry Smith This routine is analogous to memcpy(). 17041fd49c25SBarry Smith Not available from Fortran 17051fd49c25SBarry Smith 1706f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1707f5f57ec0SBarry Smith 1708580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1709d382aafbSBarry Smith 1710d382aafbSBarry Smith @*/ 17117087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1712d382aafbSBarry Smith { 1713d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1714c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1715c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1716a7e36092SMatthew G Knepley PetscFunctionBegin; 1717e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1718e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1719a7e36092SMatthew G Knepley #else 1720d382aafbSBarry Smith PetscFunctionBegin; 1721a7e36092SMatthew G Knepley #endif 1722a47a537aSLisandro Dalcin if (a != b && n > 0) { 1723d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1724e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1725d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1726d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1727d382aafbSBarry Smith #endif 1728d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1729c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1730d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1731d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1732c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1733c5df96a5SBarry Smith PetscErrorCode ierr; 1734c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 17358b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1736d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1737d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1738d382aafbSBarry Smith #else 1739d382aafbSBarry Smith size_t i; 1740d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1741d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1742d382aafbSBarry Smith #endif 1743d382aafbSBarry Smith } else { 1744d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1745d382aafbSBarry Smith } 1746d382aafbSBarry Smith #else 1747d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1748d382aafbSBarry Smith #endif 1749d382aafbSBarry Smith } 1750d382aafbSBarry Smith PetscFunctionReturn(0); 1751d382aafbSBarry Smith } 1752d382aafbSBarry Smith 1753d382aafbSBarry Smith /*@C 1754d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1755d382aafbSBarry Smith 1756d382aafbSBarry Smith Not Collective 1757d382aafbSBarry Smith 1758d382aafbSBarry Smith Input Parameters: 1759d382aafbSBarry Smith + a - pointer to beginning memory location 1760d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1761d382aafbSBarry Smith 1762d382aafbSBarry Smith Level: intermediate 1763d382aafbSBarry Smith 1764d382aafbSBarry Smith Compile Option: 1765d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1766d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1767d382aafbSBarry Smith 17681fd49c25SBarry Smith Not available from Fortran 1769857a15f1SBarry Smith Prefer PetscArrayzero() 17701fd49c25SBarry Smith 1771503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1772503cfb0cSBarry Smith 1773580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1774d382aafbSBarry Smith @*/ 17757087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1776d382aafbSBarry Smith { 1777d382aafbSBarry Smith if (n > 0) { 1778d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 177918703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1780d382aafbSBarry Smith #endif 1781d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1782d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1783d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1784d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1785d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1786d382aafbSBarry Smith } else { 1787d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1788d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1789d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1790d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1791d382aafbSBarry Smith } else { 1792d382aafbSBarry Smith #endif 1793d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1794d382aafbSBarry Smith bzero((char *)a,n); 1795d382aafbSBarry Smith #else 1796d382aafbSBarry Smith memset((char*)a,0,n); 1797d382aafbSBarry Smith #endif 1798d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1799d382aafbSBarry Smith } 1800d382aafbSBarry Smith #endif 1801d382aafbSBarry Smith } 1802d382aafbSBarry Smith return 0; 1803d382aafbSBarry Smith } 1804d382aafbSBarry Smith 1805d382aafbSBarry Smith /*MC 1806580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1807580bdb30SBarry Smith 1808580bdb30SBarry Smith Synopsis: 1809580bdb30SBarry Smith #include <petscsys.h> 1810580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1811580bdb30SBarry Smith 1812580bdb30SBarry Smith Not Collective 1813580bdb30SBarry Smith 1814580bdb30SBarry Smith Input Parameters: 1815580bdb30SBarry Smith + str1 - First array 1816580bdb30SBarry Smith . str2 - Second array 1817580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1818580bdb30SBarry Smith 1819580bdb30SBarry Smith Output Parameters: 1820580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1821580bdb30SBarry Smith 1822580bdb30SBarry Smith Level: intermediate 1823580bdb30SBarry Smith 1824580bdb30SBarry Smith Note: 1825857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1826580bdb30SBarry Smith The arrays must be of the same type 1827580bdb30SBarry Smith 1828580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1829580bdb30SBarry Smith PetscArraymove() 1830580bdb30SBarry Smith M*/ 18319e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1832580bdb30SBarry Smith 18338f8f2f0dSBarry Smith /*MC 1834580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1835580bdb30SBarry Smith do not overlap 1836580bdb30SBarry Smith 1837580bdb30SBarry Smith Synopsis: 1838580bdb30SBarry Smith #include <petscsys.h> 1839580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1840580bdb30SBarry Smith 1841580bdb30SBarry Smith Not Collective 1842580bdb30SBarry Smith 1843580bdb30SBarry Smith Input Parameters: 1844580bdb30SBarry Smith + str1 - First array 1845580bdb30SBarry Smith . str2 - Second array 1846580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1847580bdb30SBarry Smith 1848580bdb30SBarry Smith Level: intermediate 1849580bdb30SBarry Smith 1850580bdb30SBarry Smith Note: 1851857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1852580bdb30SBarry Smith The arrays must be of the same type 1853580bdb30SBarry Smith 1854580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1855580bdb30SBarry Smith M*/ 18569e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1857580bdb30SBarry Smith 18588f8f2f0dSBarry Smith /*MC 1859580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1860580bdb30SBarry Smith 1861580bdb30SBarry Smith Synopsis: 1862580bdb30SBarry Smith #include <petscsys.h> 1863580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1864580bdb30SBarry Smith 1865580bdb30SBarry Smith Not Collective 1866580bdb30SBarry Smith 1867580bdb30SBarry Smith Input Parameters: 1868de25709eSStefano Zampini + str1 - First array (destination) 1869de25709eSStefano Zampini . str2 - Second array (source) 1870580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1871580bdb30SBarry Smith 1872580bdb30SBarry Smith Level: intermediate 1873580bdb30SBarry Smith 1874580bdb30SBarry Smith Note: 1875857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1876580bdb30SBarry Smith The arrays must be of the same type 1877580bdb30SBarry Smith 1878580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1879580bdb30SBarry Smith M*/ 18809e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1881580bdb30SBarry Smith 18828f8f2f0dSBarry Smith /*MC 1883580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1884580bdb30SBarry Smith 1885580bdb30SBarry Smith Synopsis: 1886580bdb30SBarry Smith #include <petscsys.h> 1887580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1888580bdb30SBarry Smith 1889580bdb30SBarry Smith Not Collective 1890580bdb30SBarry Smith 1891580bdb30SBarry Smith Input Parameters: 1892580bdb30SBarry Smith + str1 - array 1893580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1894580bdb30SBarry Smith 1895580bdb30SBarry Smith Level: intermediate 1896580bdb30SBarry Smith 1897580bdb30SBarry Smith Note: 1898857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1899580bdb30SBarry Smith 1900580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1901580bdb30SBarry Smith M*/ 19029e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1903580bdb30SBarry Smith 1904d382aafbSBarry Smith /*MC 1905d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1906d382aafbSBarry Smith 1907eca87e8dSBarry Smith Synopsis: 1908aaa7dc30SBarry Smith #include <petscsys.h> 1909eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1910eca87e8dSBarry Smith 1911d382aafbSBarry Smith Not Collective 1912d382aafbSBarry Smith 1913d382aafbSBarry Smith Input Parameters: 1914d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1915d382aafbSBarry Smith . n - number of elements to fetch 1916d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 191750d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1918d382aafbSBarry Smith 1919d382aafbSBarry Smith Level: developer 1920d382aafbSBarry Smith 1921d382aafbSBarry Smith Notes: 1922d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1923d382aafbSBarry Smith 192450d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 192550d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 192650d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 192763cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 192863cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 192963cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1930d382aafbSBarry Smith 1931d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1932d382aafbSBarry Smith address). 1933d382aafbSBarry Smith 1934d382aafbSBarry Smith M*/ 1935d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1936d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1937d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1938d382aafbSBarry Smith } while (0) 1939d382aafbSBarry Smith 1940d382aafbSBarry Smith /* 1941d382aafbSBarry Smith Determine if some of the kernel computation routines use 1942d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1943d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1944d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1945e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1946d382aafbSBarry Smith */ 1947d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1948d382aafbSBarry Smith 1949d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1950d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1951d382aafbSBarry Smith #endif 1952d382aafbSBarry Smith 19535a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19545a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1955d382aafbSBarry Smith #endif 1956d382aafbSBarry Smith 1957d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1958d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1959d382aafbSBarry Smith #endif 1960d382aafbSBarry Smith 1961d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1962d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1963d382aafbSBarry Smith #endif 1964d382aafbSBarry Smith 1965d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1966d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1967d382aafbSBarry Smith #endif 1968d382aafbSBarry Smith 1969d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1970d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1971d382aafbSBarry Smith #endif 1972d382aafbSBarry Smith 1973d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1974d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1975d382aafbSBarry Smith #endif 1976d382aafbSBarry Smith 1977d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1978d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1979d382aafbSBarry Smith #endif 1980d382aafbSBarry Smith 1981d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1982d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1983d382aafbSBarry Smith #endif 1984d382aafbSBarry Smith 1985d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1986d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1987d382aafbSBarry Smith #endif 1988d382aafbSBarry Smith 1989d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1990d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1991d382aafbSBarry Smith #endif 1992d382aafbSBarry Smith 1993d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1994d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1995d382aafbSBarry Smith #endif 1996d382aafbSBarry Smith 1997d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1998d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1999d382aafbSBarry Smith #endif 2000d382aafbSBarry Smith 2001d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2002d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2003d382aafbSBarry Smith #endif 2004d382aafbSBarry Smith 2005d382aafbSBarry Smith #endif 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith /* 2008d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2009d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2010d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2011d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2012d382aafbSBarry Smith ugly extern "C" {} wrappers. 2013d382aafbSBarry Smith */ 2014d382aafbSBarry Smith #if defined(__cplusplus) 2015d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2016d382aafbSBarry Smith # define EXTERN_C_END } 2017d382aafbSBarry Smith #else 2018d382aafbSBarry Smith # define EXTERN_C_BEGIN 2019d382aafbSBarry Smith # define EXTERN_C_END 2020d382aafbSBarry Smith #endif 2021d382aafbSBarry Smith 2022d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2023d382aafbSBarry Smith 2024d382aafbSBarry Smith /*MC 2025d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2026d382aafbSBarry Smith communication 2027d382aafbSBarry Smith 2028d382aafbSBarry Smith Level: beginner 2029d382aafbSBarry Smith 2030d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2031d382aafbSBarry Smith 2032d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2033d382aafbSBarry Smith M*/ 2034d382aafbSBarry Smith 2035d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2036014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2037014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2038c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2039c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2040c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2041c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2042d382aafbSBarry Smith #endif 2043d382aafbSBarry Smith 2044d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2045d382aafbSBarry Smith 2046d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2047d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2048d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2049d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2050d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2051d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2052d382aafbSBarry Smith 205361b0d812SBarry Smith /*@C 2054c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2055c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2056c73702f5SBarry Smith 2057c73702f5SBarry Smith Not Collective 2058c73702f5SBarry Smith 2059c73702f5SBarry Smith Input Parameter: 2060c73702f5SBarry Smith . a - the PetscInt64 value 2061c73702f5SBarry Smith 2062c73702f5SBarry Smith Output Parameter: 2063c73702f5SBarry Smith . b - the resulting PetscInt value 2064c73702f5SBarry Smith 2065c73702f5SBarry Smith Level: advanced 2066c73702f5SBarry Smith 2067c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2068c73702f5SBarry Smith 2069c73702f5SBarry Smith Not available from Fortran 2070c73702f5SBarry Smith 2071c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast() 2072c73702f5SBarry Smith @*/ 2073c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2074c73702f5SBarry Smith { 2075c73702f5SBarry Smith PetscFunctionBegin; 2076c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2077c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2078c73702f5SBarry Smith #endif 2079c73702f5SBarry Smith *b = (PetscInt)(a); 2080c73702f5SBarry Smith PetscFunctionReturn(0); 2081c73702f5SBarry Smith } 2082c73702f5SBarry Smith 2083c73702f5SBarry Smith /*@C 208461b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 208561b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 208661b0d812SBarry Smith 208761b0d812SBarry Smith Not Collective 208861b0d812SBarry Smith 208961b0d812SBarry Smith Input Parameter: 209061b0d812SBarry Smith . a - the PetscInt value 209161b0d812SBarry Smith 209261b0d812SBarry Smith Output Parameter: 209361b0d812SBarry Smith . b - the resulting PetscBLASInt value 209461b0d812SBarry Smith 209561b0d812SBarry Smith Level: advanced 209661b0d812SBarry Smith 20971fd49c25SBarry Smith Not available from Fortran 20981fd49c25SBarry Smith 2099c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 210061b0d812SBarry Smith @*/ 2101c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2102c5df96a5SBarry Smith { 2103c5df96a5SBarry Smith PetscFunctionBegin; 2104c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 210573f49a0bSSatish Balay *b = 0; 2106c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2107c5df96a5SBarry Smith #endif 2108c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2109c5df96a5SBarry Smith PetscFunctionReturn(0); 2110c5df96a5SBarry Smith } 2111c5df96a5SBarry Smith 211261b0d812SBarry Smith /*@C 211361b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 211461b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 211561b0d812SBarry Smith 211661b0d812SBarry Smith Not Collective 211761b0d812SBarry Smith 211861b0d812SBarry Smith Input Parameter: 211961b0d812SBarry Smith . a - the PetscInt value 212061b0d812SBarry Smith 212161b0d812SBarry Smith Output Parameter: 212261b0d812SBarry Smith . b - the resulting PetscMPIInt value 212361b0d812SBarry Smith 212461b0d812SBarry Smith Level: advanced 212561b0d812SBarry Smith 21261fd49c25SBarry Smith Not available from Fortran 21271fd49c25SBarry Smith 2128c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 212961b0d812SBarry Smith @*/ 21304dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 21314dc2109aSBarry Smith { 21324dc2109aSBarry Smith PetscFunctionBegin; 21334dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 213473f49a0bSSatish Balay *b = 0; 21354dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 21364dc2109aSBarry Smith #endif 2137c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21384dc2109aSBarry Smith PetscFunctionReturn(0); 21394dc2109aSBarry Smith } 21404dc2109aSBarry Smith 2141bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 21422f18eb33SBarry Smith 21432f18eb33SBarry Smith /*@C 21442f18eb33SBarry Smith 21452f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 21462f18eb33SBarry Smith 21472f18eb33SBarry Smith Not Collective 21482f18eb33SBarry Smith 21492f18eb33SBarry Smith Input Parameter: 21502f18eb33SBarry Smith + a - the PetscReal value 21512f18eb33SBarry Smith - b - the second value 21522f18eb33SBarry Smith 2153390e1bf2SBarry Smith Returns: 2154390e1bf2SBarry Smith the result as a PetscInt value 21552f18eb33SBarry Smith 2156bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21572f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 21582f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21592f18eb33SBarry Smith 2160e28ce29aSPatrick Sanan Developers Note: 2161e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21622f18eb33SBarry Smith 21632f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21642f18eb33SBarry Smith 21651fd49c25SBarry Smith Not available from Fortran 21661fd49c25SBarry Smith 21672f18eb33SBarry Smith Level: advanced 21682f18eb33SBarry Smith 2169390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 21702f18eb33SBarry Smith @*/ 21712f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 21722f18eb33SBarry Smith { 2173bafee8b4SSatish Balay PetscInt64 r; 21742f18eb33SBarry Smith 2175bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 21762f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21772f18eb33SBarry Smith return (PetscInt) r; 21782f18eb33SBarry Smith } 21792f18eb33SBarry Smith 21802f18eb33SBarry Smith /*@C 21812f18eb33SBarry Smith 21822f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 21832f18eb33SBarry Smith 21842f18eb33SBarry Smith Not Collective 21852f18eb33SBarry Smith 21862f18eb33SBarry Smith Input Parameter: 21872f18eb33SBarry Smith + a - the PetscInt value 21882f18eb33SBarry Smith - b - the second value 21892f18eb33SBarry Smith 2190390e1bf2SBarry Smith Returns: 2191390e1bf2SBarry Smith the result as a PetscInt value 21922f18eb33SBarry Smith 2193bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21942f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 21952f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21962f18eb33SBarry Smith 21971fd49c25SBarry Smith Not available from Fortran 21981fd49c25SBarry Smith 21992f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22002f18eb33SBarry Smith 22012f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22022f18eb33SBarry Smith 22032f18eb33SBarry Smith Level: advanced 22042f18eb33SBarry Smith 2205390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 22062f18eb33SBarry Smith @*/ 22072f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 22082f18eb33SBarry Smith { 2209bafee8b4SSatish Balay PetscInt64 r; 22102f18eb33SBarry Smith 2211bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22122f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22132f18eb33SBarry Smith return (PetscInt) r; 22142f18eb33SBarry Smith } 22152f18eb33SBarry Smith 2216f91af8c7SBarry Smith /*@C 2217f91af8c7SBarry Smith 2218f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2219f91af8c7SBarry Smith 2220f91af8c7SBarry Smith Not Collective 2221f91af8c7SBarry Smith 2222f91af8c7SBarry Smith Input Parameter: 2223f91af8c7SBarry Smith + a - the PetscInt value 2224f91af8c7SBarry Smith - b - the second value 2225f91af8c7SBarry Smith 2226390e1bf2SBarry Smith Returns: 2227390e1bf2SBarry Smith the result as a PetscInt value 2228f91af8c7SBarry Smith 2229bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2230f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2231f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2232f91af8c7SBarry Smith 2233f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2234f91af8c7SBarry Smith 2235f5f57ec0SBarry Smith Not available from Fortran 2236f5f57ec0SBarry Smith 2237f91af8c7SBarry Smith Level: advanced 2238f91af8c7SBarry Smith 2239390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2240f91af8c7SBarry Smith @*/ 2241f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2242f91af8c7SBarry Smith { 2243bafee8b4SSatish Balay PetscInt64 r; 2244f91af8c7SBarry Smith 2245bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2246f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2247f91af8c7SBarry Smith return (PetscInt) r; 2248f91af8c7SBarry Smith } 2249f91af8c7SBarry Smith 22502f18eb33SBarry Smith /*@C 22512f18eb33SBarry Smith 22522f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 22532f18eb33SBarry Smith 22542f18eb33SBarry Smith Not Collective 22552f18eb33SBarry Smith 22562f18eb33SBarry Smith Input Parameter: 22572f18eb33SBarry Smith + a - the PetscInt value 22582f18eb33SBarry Smith - b - the second value 22592f18eb33SBarry Smith 22602f18eb33SBarry Smith Output Parameter:ma 2261390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 22622f18eb33SBarry Smith 2263bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 22642f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 22652f18eb33SBarry Smith 2266f5f57ec0SBarry Smith Not available from Fortran 2267f5f57ec0SBarry Smith 2268220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 22692f18eb33SBarry Smith 22702f18eb33SBarry Smith Level: advanced 22712f18eb33SBarry Smith 2272220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 22732f18eb33SBarry Smith @*/ 22742f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 22752f18eb33SBarry Smith { 2276bafee8b4SSatish Balay PetscInt64 r; 22772f18eb33SBarry Smith 22782f18eb33SBarry Smith PetscFunctionBegin; 2279bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22802f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22812f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 22822f18eb33SBarry Smith #endif 2283f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2284f91af8c7SBarry Smith PetscFunctionReturn(0); 2285f91af8c7SBarry Smith } 2286f91af8c7SBarry Smith 2287f91af8c7SBarry Smith /*@C 2288f91af8c7SBarry Smith 2289fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2290f91af8c7SBarry Smith 2291f91af8c7SBarry Smith Not Collective 2292f91af8c7SBarry Smith 2293f91af8c7SBarry Smith Input Parameter: 2294f91af8c7SBarry Smith + a - the PetscInt value 2295f91af8c7SBarry Smith - b - the second value 2296f91af8c7SBarry Smith 2297f91af8c7SBarry Smith Output Parameter:ma 2298390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2299f91af8c7SBarry Smith 2300bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2301f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2302f91af8c7SBarry Smith 2303f5f57ec0SBarry Smith Not available from Fortran 2304f5f57ec0SBarry Smith 2305f91af8c7SBarry Smith Level: advanced 2306f91af8c7SBarry Smith 2307390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2308f91af8c7SBarry Smith @*/ 2309f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2310f91af8c7SBarry Smith { 2311bafee8b4SSatish Balay PetscInt64 r; 2312f91af8c7SBarry Smith 2313f91af8c7SBarry Smith PetscFunctionBegin; 2314bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2315f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2316f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2317f91af8c7SBarry Smith #endif 2318f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 23192f18eb33SBarry Smith PetscFunctionReturn(0); 23202f18eb33SBarry Smith } 2321c5df96a5SBarry Smith 2322d382aafbSBarry Smith /* 23232981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2324d382aafbSBarry Smith */ 2325d382aafbSBarry Smith #if defined(hz) 2326d382aafbSBarry Smith # undef hz 2327d382aafbSBarry Smith #endif 2328d382aafbSBarry Smith 232915a5570dSLisandro Dalcin #include <limits.h> 233015a5570dSLisandro Dalcin 233115a5570dSLisandro Dalcin /* The number of bits in a byte */ 233215a5570dSLisandro Dalcin 233315a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 233415a5570dSLisandro Dalcin 2335d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2336d382aafbSBarry Smith # include <sys/types.h> 2337d382aafbSBarry Smith #endif 2338d382aafbSBarry Smith 2339d382aafbSBarry Smith /*MC 2340d382aafbSBarry Smith 234166d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 234266d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 234366d79e26SBarry Smith 234466d79e26SBarry Smith 234566d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 234666d79e26SBarry Smith 234766d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 234866d79e26SBarry Smith 234966d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 235066d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 235166d79e26SBarry Smith 235266d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 235366d79e26SBarry Smith 235466d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 235566d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 235666d79e26SBarry Smith version number (x.y.z). 235766d79e26SBarry Smith 235866d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 235966d79e26SBarry Smith 236066d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 236166d79e26SBarry Smith 236266d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 236366d79e26SBarry Smith 236466d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 236566d79e26SBarry Smith 236666d79e26SBarry Smith Level: intermediate 236766d79e26SBarry Smith 236866d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 236966d79e26SBarry Smith 237066d79e26SBarry Smith M*/ 237166d79e26SBarry Smith 237266d79e26SBarry Smith /*MC 237366d79e26SBarry Smith 23741b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 23751b266c99SBarry Smith of every function and module definition you need something like 2376d382aafbSBarry Smith 2377d382aafbSBarry Smith $ 2378af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 23790f665fc7SPatrick Sanan $ use petscXXX 23801b266c99SBarry Smith 2381692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 23821b266c99SBarry Smith 2383d382aafbSBarry Smith $ XXX variablename 23841b266c99SBarry Smith $ type(tXXX) variablename 23851b266c99SBarry Smith 2386692afcd8SPatrick Sanan For example, 23871b266c99SBarry Smith 2388bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 23891b266c99SBarry Smith $ use petscvec 2390d382aafbSBarry Smith $ 2391692afcd8SPatrick Sanan $ Vec b 2392692afcd8SPatrick Sanan $ type(tVec) x 2393d382aafbSBarry Smith 2394d382aafbSBarry Smith Level: beginner 2395d382aafbSBarry Smith 2396d382aafbSBarry Smith M*/ 2397d382aafbSBarry Smith 2398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 240427710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24055f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2406d382aafbSBarry Smith 24076a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24086a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24096a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2411ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 241222ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2414f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 241560e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2416d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 24206c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 242117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 242217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 24245569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 242617df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 242839f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2430745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 243139f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 24356c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 24366c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2437e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2438d382aafbSBarry Smith 2439ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2440ce605777SToby Isaac 2441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2443d382aafbSBarry Smith 244476bdecfbSBarry Smith /*J 2445d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2446d382aafbSBarry Smith 2447d382aafbSBarry Smith Level: beginner 2448d382aafbSBarry Smith 2449e28ce29aSPatrick Sanan Notes: 2450e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 245125ccb61fSToby Isaac with the option --download-sprng or --download-random123 2452d382aafbSBarry Smith 24538f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 245476bdecfbSBarry Smith J*/ 245519fd82e9SBarry Smith typedef const char* PetscRandomType; 2456d382aafbSBarry Smith #define PETSCRAND "rand" 2457d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2458d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2459c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 246025ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2461d382aafbSBarry Smith 2462d382aafbSBarry Smith /* Logging support */ 2463014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2464d382aafbSBarry Smith 2465607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2466d382aafbSBarry Smith 2467d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2468140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2469d382aafbSBarry Smith 2470bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 247119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 247319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2474fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2476d382aafbSBarry Smith 2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2486d382aafbSBarry Smith 2487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 249497540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24958a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 249697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2497d382aafbSBarry Smith 249830815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 249930815ce0SLisandro Dalcin 25009860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 25019860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2502f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2503f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2511c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2512e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2513c891a504SStefano Zampini #endif 2514d382aafbSBarry Smith 2515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2518d382aafbSBarry Smith 2519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2525d382aafbSBarry Smith 2526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2531cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2532cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2533d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2534d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2535d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2536d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 25376afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 25386afbe7ddSJed Brown MPI_Request**,MPI_Request**, 25396afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 25406afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 25416afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2542d382aafbSBarry Smith 25436145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 25446145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 25456145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 25466145cd65SJed Brown 2547014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2548d382aafbSBarry Smith 2549ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2550ce94432eSBarry Smith 255145487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 255245487dadSJed Brown 2553d382aafbSBarry Smith struct _n_PetscSubcomm { 2554d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2555d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2556306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 255745487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 255845487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2559708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 256045487dadSJed Brown PetscSubcommType type; 2561e5acf8a4SHong Zhang char *subcommprefix; 2562d382aafbSBarry Smith }; 2563d382aafbSBarry Smith 2564c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2565306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 256636be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 257165d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2572053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2573f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2574e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2575a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2576a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2577a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2578d382aafbSBarry Smith 25799962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 25809962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 25819962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 25829962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 25839962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 25849962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25859962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 25869962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 25879962606eSBarry Smith 25885e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25895f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 25905f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25915f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25925f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 25935e71baefSBarry Smith 2594a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2595a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2596a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2597a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2598a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2599a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2600a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2601a32e93adSJunchao Zhang 260213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 26030f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 260413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2605137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2606137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2607137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 260813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 260913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 26100f453b92SJed Brown 26115e71baefSBarry Smith 2612471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2613471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2614471ecdacSJed Brown * possible. */ 26156a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2616d382aafbSBarry Smith 26179de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 26189de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 26199de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 26209de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 26219de0f6ecSBarry Smith 2622ace2fbaeSBarry Smith #include <stdarg.h> 2623ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2624ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2625ace2fbaeSBarry Smith 2626268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2627fbfcfee5SBarry Smith 26281f817a21SBarry Smith /*@C 26291f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26301f817a21SBarry Smith 26311f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 26321f817a21SBarry Smith 26331f817a21SBarry Smith Input Parameters: 26341f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 26351f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 26361f817a21SBarry Smith 2637850545d0SSatish Balay Level: intermediate 2638850545d0SSatish Balay 2639f5f57ec0SBarry Smith Not available from Fortran 2640f5f57ec0SBarry Smith 26411f817a21SBarry Smith Options Database: 2642063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 26431f817a21SBarry Smith @*/ 2644dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2645dff31646SBarry Smith { 2646dff31646SBarry Smith size_t len; 2647dff31646SBarry Smith char *vstring; 2648dff31646SBarry Smith PetscErrorCode ierr; 2649dff31646SBarry Smith 26501f817a21SBarry Smith PetscFunctionBegin; 26518d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2652dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 265335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2654580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2655dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26561f817a21SBarry Smith PetscFunctionReturn(0); 2657dff31646SBarry Smith } 2658dff31646SBarry Smith 2659b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2660fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2661fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2662f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2663fe278a28SBarry Smith 2664f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2665f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2666b967cddfSBarry Smith 26679f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 26689f4d3c52SBarry Smith 266904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2670763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2671dff31646SBarry Smith 267268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 26735dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2674d382aafbSBarry Smith 2675b2566f29SBarry Smith 2676b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2677b2566f29SBarry Smith /* 2678b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2679b2566f29SBarry Smith */ 26808f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 268177a5e07dSBarry Smith 268277a5e07dSBarry Smith /*MC 268377a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 268477a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 268577a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 268677a5e07dSBarry Smith 2687d083f849SBarry Smith Collective 268877a5e07dSBarry Smith 268977a5e07dSBarry Smith Synopsis: 269077a5e07dSBarry Smith #include <petscsys.h> 269177a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 269277a5e07dSBarry Smith 269377a5e07dSBarry Smith Input Parameters: 269477a5e07dSBarry Smith + indata - pointer to the input data to be reduced 269577a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 269677a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 269777a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 269877a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 269977a5e07dSBarry Smith 270077a5e07dSBarry Smith Output Parameter: 270177a5e07dSBarry Smith . outdata - the reduced values 270277a5e07dSBarry Smith 2703e28ce29aSPatrick Sanan Notes: 2704e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 270577a5e07dSBarry Smith 270677a5e07dSBarry Smith Level: developer 270777a5e07dSBarry Smith 270877a5e07dSBarry Smith .seealso: MPI_Allreduce() 270977a5e07dSBarry Smith M*/ 2710fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2711b2566f29SBarry Smith #else 2712b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2713b2566f29SBarry Smith #endif 2714b2566f29SBarry Smith 2715b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 27168198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 27178198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 27182f065d89SBarry Smith #endif 27198198064fSBarry Smith 272012801b39SBarry Smith /* 272112801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 272212801b39SBarry Smith */ 27238ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 27248ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 272512801b39SBarry Smith 2726d382aafbSBarry Smith #endif 2727