xref: /petsc/include/petscsys.h (revision 48703020567bde5ecc167cd0dbab7fae1f2b65a2)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
11d382aafbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE
12d382aafbSBarry Smith */
13d382aafbSBarry Smith #include "petscconf.h"
14d382aafbSBarry Smith #include "petscfix.h"
15d382aafbSBarry Smith 
1673fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1773fca5a0SBarry Smith /*
1873fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
1973fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2073fca5a0SBarry Smith */
2173fca5a0SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L)
2273fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2373fca5a0SBarry Smith #endif
2473fca5a0SBarry Smith #if defined(PETSC__BSD_SOURCE)
2573fca5a0SBarry Smith #define _BSD_SOURCE
2673fca5a0SBarry Smith #endif
2773fca5a0SBarry Smith #endif
2873fca5a0SBarry Smith 
29d382aafbSBarry Smith /* ========================================================================== */
30d382aafbSBarry Smith /*
31d382aafbSBarry Smith    This facilitates using C version of PETSc from C++ and
32e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
33d382aafbSBarry Smith */
34d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
35d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
36d382aafbSBarry Smith #endif
371ec50b02SJed Brown 
381ec50b02SJed Brown #if defined(__cplusplus)
391ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
401ec50b02SJed Brown #else
411ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
421ec50b02SJed Brown #endif
43d382aafbSBarry Smith 
44d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
45d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
46d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
47d382aafbSBarry Smith #else
48d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
49d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
50d382aafbSBarry Smith #endif
51d382aafbSBarry Smith /* ========================================================================== */
52d382aafbSBarry Smith /*
53d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
54d382aafbSBarry Smith     Web page
55d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
56d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
57d382aafbSBarry Smith     src/docs/website/index.html.
58d382aafbSBarry Smith */
59d382aafbSBarry Smith #include "petscversion.h"
60301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
61d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
62301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
63d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
64301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
65d382aafbSBarry Smith #else
66301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
67301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
68d382aafbSBarry Smith #endif
69d382aafbSBarry Smith 
70d382aafbSBarry Smith /*MC
71d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
72d382aafbSBarry Smith 
73d382aafbSBarry Smith     Input Parameter:
74d382aafbSBarry Smith .   len - length of the string
75d382aafbSBarry Smith 
76d382aafbSBarry Smith     Output Parameter:
77d382aafbSBarry Smith .   version - version string
78d382aafbSBarry Smith 
79d382aafbSBarry Smith     Level: developer
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     Usage:
82d382aafbSBarry Smith     char version[256];
83d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
84d382aafbSBarry Smith 
85d382aafbSBarry Smith     Fortran Note:
86d382aafbSBarry Smith     This routine is not supported in Fortran.
87d382aafbSBarry Smith 
88d382aafbSBarry Smith .seealso: PetscGetProgramName()
89d382aafbSBarry Smith 
90d382aafbSBarry Smith M*/
91d382aafbSBarry Smith 
92d382aafbSBarry Smith /* ========================================================================== */
93d382aafbSBarry Smith 
94d382aafbSBarry Smith /*
95d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
96d382aafbSBarry Smith 
97d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
98d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
99d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
100d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
101d382aafbSBarry Smith     mpicxx.h directly in their code
102d382aafbSBarry Smith */
103d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
104d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
105d382aafbSBarry Smith #include "mpi.h"
10665013866SBarry Smith 
107d382aafbSBarry Smith /*
108d382aafbSBarry Smith     Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
109d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
110d382aafbSBarry Smith 
111d382aafbSBarry Smith     The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense.
112d382aafbSBarry Smith */
113d382aafbSBarry Smith #include <stdio.h>
114d382aafbSBarry Smith 
115d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
116d382aafbSBarry Smith #if !defined(MPIAPI)
117d382aafbSBarry Smith #define MPIAPI
118d382aafbSBarry Smith #endif
119d382aafbSBarry Smith 
120b3506946SBarry Smith 
121d382aafbSBarry Smith /*MC
122d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
123d382aafbSBarry Smith 
124d382aafbSBarry Smith     Level: beginner
125d382aafbSBarry Smith 
126d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
127d382aafbSBarry Smith M*/
128d382aafbSBarry Smith typedef int PetscErrorCode;
129d382aafbSBarry Smith 
130d382aafbSBarry Smith /*MC
131d382aafbSBarry Smith 
132503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
133d382aafbSBarry Smith          (internal integer in the data structure used for error
134d382aafbSBarry Smith          checking). These are all defined by an offset from the lowest
1350700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
136d382aafbSBarry Smith 
137d382aafbSBarry Smith     Level: advanced
138d382aafbSBarry Smith 
1390700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
140d382aafbSBarry Smith M*/
1410700a824SBarry Smith typedef int PetscClassId;
142d382aafbSBarry Smith 
143d382aafbSBarry Smith 
144d382aafbSBarry Smith /*MC
145d382aafbSBarry Smith     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
146d382aafbSBarry Smith 
147d382aafbSBarry Smith     Level: intermediate
148d382aafbSBarry Smith 
149d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1503b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
151287e6e24SBarry Smith            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
1523b2a8c54SBarry Smith 
1533b2a8c54SBarry Smith     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1543b2a8c54SBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
1553b2a8c54SBarry Smith 
1563b2a8c54SBarry Smith     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1573b2a8c54SBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
158d382aafbSBarry Smith 
159287e6e24SBarry Smith     Developer Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
160287e6e24SBarry Smith      if you run ./configure with the option
161287e6e24SBarry Smith      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
162287e6e24SBarry Smith      for example, you can change the int below to long int. Since MATLAB uses the MKL (Intel Math Libraries) it is likely one can
163287e6e24SBarry Smith      purchase a 64 bit integer version of the MKL and use that with a  PetscBLASInt of long int.
164287e6e24SBarry Smith 
165287e6e24SBarry Smith      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
166287e6e24SBarry Smith      be used with PETSc if you have set PetscBLASInt to long int.
167287e6e24SBarry Smith 
168d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt
169d382aafbSBarry Smith 
170d382aafbSBarry Smith M*/
171d382aafbSBarry Smith typedef int PetscBLASInt;
172d382aafbSBarry Smith 
173d382aafbSBarry Smith /*MC
174d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
175d382aafbSBarry Smith 
176d382aafbSBarry Smith     Level: intermediate
177d382aafbSBarry Smith 
178d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1793b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
180d382aafbSBarry Smith 
1813b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
182d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
183d382aafbSBarry Smith 
1843b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
185d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
186d382aafbSBarry Smith 
187d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
188d382aafbSBarry Smith 
189d382aafbSBarry Smith M*/
190d382aafbSBarry Smith typedef int PetscMPIInt;
191d382aafbSBarry Smith 
192d382aafbSBarry Smith /*MC
193d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
194d382aafbSBarry Smith 
195d382aafbSBarry Smith     Level: intermediate
196d382aafbSBarry Smith 
197d382aafbSBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
198d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
199d382aafbSBarry Smith 
200d382aafbSBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
201d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
202d382aafbSBarry Smith 
203d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
204d382aafbSBarry Smith M*/
205d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
206d382aafbSBarry Smith 
207d382aafbSBarry Smith /*MC
208d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
2093b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
210d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
211d382aafbSBarry Smith 
212d382aafbSBarry Smith    Level: intermediate
213d382aafbSBarry Smith 
214d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
215d382aafbSBarry Smith M*/
216236ed0a3SSatish Balay #if defined(PETSC_HAVE___INT64)
217236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
218236ed0a3SSatish Balay #else
219236ed0a3SSatish Balay typedef long long Petsc64bitInt;
220236ed0a3SSatish Balay #endif
221d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
222236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
223d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
224d382aafbSBarry Smith #else
225d382aafbSBarry Smith typedef int PetscInt;
226d382aafbSBarry Smith #define MPIU_INT MPI_INT
227d382aafbSBarry Smith #endif
228236ed0a3SSatish Balay 
229d382aafbSBarry Smith 
23058b60935SBarry Smith /*EC
23158b60935SBarry Smith 
23258b60935SBarry Smith     PetscPrecision - indicates what precision the object is using
23358b60935SBarry Smith 
23458b60935SBarry Smith     Level: advanced
23558b60935SBarry Smith 
23658b60935SBarry Smith .seealso: PetscObjectSetPrecision()
23758b60935SBarry Smith E*/
23858b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
23958b60935SBarry Smith extern const char *PetscPrecisions[];
24058b60935SBarry Smith 
24158b60935SBarry Smith 
242503cfb0cSBarry Smith /*
243503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
244503cfb0cSBarry Smith */
245d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
246d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
247d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
248d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
249d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
250d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
251d382aafbSBarry Smith #else
252d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
253d382aafbSBarry Smith #endif
254d382aafbSBarry Smith 
255d382aafbSBarry Smith 
256d382aafbSBarry Smith /*
257d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
258d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
259d382aafbSBarry Smith */
260d382aafbSBarry Smith 
261d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
262d382aafbSBarry Smith 
263d382aafbSBarry Smith /*
264d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
265d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
266d382aafbSBarry Smith */
267d382aafbSBarry Smith extern FILE* PETSC_STDERR;
268d382aafbSBarry Smith 
269d382aafbSBarry Smith /*
270d382aafbSBarry Smith       PETSC_ZOPEFD is used to send data to the PETSc webpage.  It can be used
271d382aafbSBarry Smith     in conjunction with PETSC_STDOUT, or by itself.
272d382aafbSBarry Smith */
273d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD;
274d382aafbSBarry Smith 
275d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
276d382aafbSBarry Smith /*MC
277d382aafbSBarry Smith       PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of
278d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
279d382aafbSBarry Smith 
280d382aafbSBarry Smith    Synopsis:
281d382aafbSBarry Smith    PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function))
282d382aafbSBarry Smith 
283eca87e8dSBarry Smith      Not collective
284eca87e8dSBarry Smith 
285d382aafbSBarry Smith    Level: developer
286d382aafbSBarry Smith 
287d382aafbSBarry Smith     Example:
288d382aafbSBarry Smith       PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine
289d382aafbSBarry Smith            PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r)
290d382aafbSBarry Smith 
291d382aafbSBarry Smith .seealso: PetscPolymorphicFunction()
292d382aafbSBarry Smith 
293d382aafbSBarry Smith M*/
294d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;}
295d382aafbSBarry Smith 
296d382aafbSBarry Smith /*MC
297d382aafbSBarry Smith       PetscPolymorphicScalar - allows defining a C++ polymorphic version of
298d382aafbSBarry Smith             a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument
299d382aafbSBarry Smith 
300d382aafbSBarry Smith    Synopsis:
301d382aafbSBarry Smith    PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function))
302d382aafbSBarry Smith 
303eca87e8dSBarry Smith    Not collective
304eca87e8dSBarry Smith 
305d382aafbSBarry Smith    Level: developer
306d382aafbSBarry Smith 
307d382aafbSBarry Smith     Example:
308d382aafbSBarry Smith       PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine
309d382aafbSBarry Smith            PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);}
310d382aafbSBarry Smith 
311d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine()
312d382aafbSBarry Smith 
313d382aafbSBarry Smith M*/
314d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;}
315d382aafbSBarry Smith 
316d382aafbSBarry Smith /*MC
317d382aafbSBarry Smith       PetscPolymorphicFunction - allows defining a C++ polymorphic version of
318d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
319d382aafbSBarry Smith             and returns the computed value (istead of an error code)
320d382aafbSBarry Smith 
321d382aafbSBarry Smith    Synopsis:
322d382aafbSBarry Smith    PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name)
323d382aafbSBarry Smith 
324eca87e8dSBarry Smith      Not collective
325eca87e8dSBarry Smith 
326d382aafbSBarry Smith    Level: developer
327d382aafbSBarry Smith 
328d382aafbSBarry Smith     Example:
329d382aafbSBarry Smith       PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine
330d382aafbSBarry Smith          PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;}
331d382aafbSBarry Smith 
332d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine()
333d382aafbSBarry Smith 
334d382aafbSBarry Smith M*/
335d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;}
336d382aafbSBarry Smith 
337d382aafbSBarry Smith #else
338d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C)
339d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C)
340d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E)
341d382aafbSBarry Smith #endif
342d382aafbSBarry Smith 
343d382aafbSBarry Smith /*MC
344d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
345d382aafbSBarry Smith 
346d382aafbSBarry Smith     Synopsis:
347ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
348d382aafbSBarry Smith 
349eca87e8dSBarry Smith     Not Collective
350eca87e8dSBarry Smith 
351d382aafbSBarry Smith     Input Parameters:
352d382aafbSBarry Smith .   cond - condition or expression
353d382aafbSBarry Smith 
354d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
355d382aafbSBarry Smith     branch is unlikely.
356d382aafbSBarry Smith 
357d382aafbSBarry Smith     Level: advanced
358d382aafbSBarry Smith 
359d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
360d382aafbSBarry Smith M*/
361d382aafbSBarry Smith 
362d382aafbSBarry Smith /*MC
363d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
364d382aafbSBarry Smith 
365d382aafbSBarry Smith     Synopsis:
366ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
367d382aafbSBarry Smith 
368eca87e8dSBarry Smith     Not Collective
369eca87e8dSBarry Smith 
370d382aafbSBarry Smith     Input Parameters:
371d382aafbSBarry Smith .   cond - condition or expression
372d382aafbSBarry Smith 
373d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
374d382aafbSBarry Smith     branch is likely.
375d382aafbSBarry Smith 
376d382aafbSBarry Smith     Level: advanced
377d382aafbSBarry Smith 
378d382aafbSBarry Smith .seealso: PetscUnlikely()
379d382aafbSBarry Smith M*/
380d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
381d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
382d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
383d382aafbSBarry Smith #else
384cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
385cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
386d382aafbSBarry Smith #endif
387d382aafbSBarry Smith 
388d382aafbSBarry Smith /*
389d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
390d382aafbSBarry Smith */
391d382aafbSBarry Smith #include "petscmath.h"
392d382aafbSBarry Smith 
393d382aafbSBarry Smith /*
394d382aafbSBarry Smith     Declare extern C stuff after including external header files
395d382aafbSBarry Smith */
396d382aafbSBarry Smith 
397d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
398d382aafbSBarry Smith 
399d382aafbSBarry Smith /*
400d382aafbSBarry Smith        Basic PETSc constants
401d382aafbSBarry Smith */
402d382aafbSBarry Smith 
403d382aafbSBarry Smith /*E
404ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
405d382aafbSBarry Smith 
406d382aafbSBarry Smith    Level: beginner
407d382aafbSBarry Smith 
408ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
40934e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
41034e82e7dSBarry Smith 
411d382aafbSBarry Smith E*/
412ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
413ace3abfcSBarry Smith extern const char *PetscBools[];
41470b3c8c7SBarry Smith 
41570b3c8c7SBarry Smith /*E
41670b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
41770b3c8c7SBarry Smith 
41870b3c8c7SBarry Smith    Level: beginner
41970b3c8c7SBarry Smith 
42070b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
42170b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
42270b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
42370b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
42470b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
42570b3c8c7SBarry Smith 
42670b3c8c7SBarry Smith E*/
42770b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
42870b3c8c7SBarry Smith extern const char *PetscCopyModes[];
429d382aafbSBarry Smith 
430d382aafbSBarry Smith /*MC
431ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
432d382aafbSBarry Smith 
433d382aafbSBarry Smith     Level: beginner
434d382aafbSBarry Smith 
435d382aafbSBarry Smith     Note: Zero integer
436d382aafbSBarry Smith 
437ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
438d382aafbSBarry Smith M*/
439d382aafbSBarry Smith 
440d382aafbSBarry Smith /*MC
441ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
442d382aafbSBarry Smith 
443d382aafbSBarry Smith     Level: beginner
444d382aafbSBarry Smith 
445d382aafbSBarry Smith     Note: Nonzero integer
446d382aafbSBarry Smith 
447ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
448d382aafbSBarry Smith M*/
449d382aafbSBarry Smith 
450d382aafbSBarry Smith /*MC
451d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
452d382aafbSBarry Smith 
453d382aafbSBarry Smith    Level: beginner
454d382aafbSBarry Smith 
455d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
456d382aafbSBarry Smith           some default
457d382aafbSBarry Smith 
458d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
459503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
460d382aafbSBarry Smith 
46134e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
46234e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
46334e82e7dSBarry Smith 
464d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
465d382aafbSBarry Smith 
466d382aafbSBarry Smith M*/
467d382aafbSBarry Smith #define PETSC_NULL           0
468d382aafbSBarry Smith 
469d382aafbSBarry Smith /*MC
470d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
471d382aafbSBarry Smith 
472d382aafbSBarry Smith    Level: beginner
473d382aafbSBarry Smith 
474d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
475d382aafbSBarry Smith           some default
476d382aafbSBarry Smith 
477d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
478d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
479d382aafbSBarry Smith 
480d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
481d382aafbSBarry Smith 
482d382aafbSBarry Smith M*/
483d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
484d382aafbSBarry Smith 
485d382aafbSBarry Smith /*MC
486557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
487557d4da8SBarry Smith        where you wish PETSc to use the default.
488557d4da8SBarry Smith 
489557d4da8SBarry Smith    Level: beginner
490557d4da8SBarry Smith 
491557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
492557d4da8SBarry Smith 
493557d4da8SBarry Smith M*/
494557d4da8SBarry Smith #define PETSC_DECIDE  -1
495557d4da8SBarry Smith 
496557d4da8SBarry Smith /*MC
497d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
498d382aafbSBarry Smith        where you wish PETSc to compute the required value.
499d382aafbSBarry Smith 
500d382aafbSBarry Smith    Level: beginner
501d382aafbSBarry Smith 
502557d4da8SBarry Smith 
503557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
504557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
505557d4da8SBarry Smith 
506d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
507d382aafbSBarry Smith 
508d382aafbSBarry Smith M*/
509d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
510d382aafbSBarry Smith 
511d382aafbSBarry Smith /*MC
512557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
513557d4da8SBarry Smith        where you wish PETSc to use the default.
514557d4da8SBarry Smith 
515557d4da8SBarry Smith    Level: beginner
516557d4da8SBarry Smith 
517557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
518557d4da8SBarry Smith 
519557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
520557d4da8SBarry Smith 
521557d4da8SBarry Smith M*/
522557d4da8SBarry Smith #define PETSC_DEFAULT  -2
523557d4da8SBarry Smith 
524557d4da8SBarry Smith /*MC
525d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
526d382aafbSBarry Smith            all the processs that PETSc knows about.
527d382aafbSBarry Smith 
528d382aafbSBarry Smith    Level: beginner
529d382aafbSBarry Smith 
530d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
531d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
532d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
533d382aafbSBarry Smith           PetscInitialize()
534d382aafbSBarry Smith 
535d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
536d382aafbSBarry Smith 
537d382aafbSBarry Smith M*/
538d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
539d382aafbSBarry Smith 
540d382aafbSBarry Smith /*MC
541503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
542d382aafbSBarry Smith 
543d382aafbSBarry Smith    Level: beginner
544d382aafbSBarry Smith 
545d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
546d382aafbSBarry Smith 
547d382aafbSBarry Smith M*/
548d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
549d382aafbSBarry Smith 
5507087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
5517087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
5520fad1ec9SSatish Balay extern PetscBool   synchronizeCUSP;
553d382aafbSBarry Smith 
5547087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
5557087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
5567087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
557d382aafbSBarry Smith 
558d382aafbSBarry Smith /*MC
559d382aafbSBarry Smith    PetscMalloc - Allocates memory
560d382aafbSBarry Smith 
561eca87e8dSBarry Smith    Synopsis:
562eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
563eca87e8dSBarry Smith 
564eca87e8dSBarry Smith    Not Collective
565eca87e8dSBarry Smith 
566d382aafbSBarry Smith    Input Parameter:
567d382aafbSBarry Smith .  m - number of bytes to allocate
568d382aafbSBarry Smith 
569d382aafbSBarry Smith    Output Parameter:
570d382aafbSBarry Smith .  result - memory allocated
571d382aafbSBarry Smith 
572d382aafbSBarry Smith    Level: beginner
573d382aafbSBarry Smith 
574d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
575d382aafbSBarry Smith 
576d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
577d382aafbSBarry Smith           properly handle not freeing the null pointer.
578d382aafbSBarry Smith 
579d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
580d382aafbSBarry Smith 
581d382aafbSBarry Smith   Concepts: memory allocation
582d382aafbSBarry Smith 
583d382aafbSBarry Smith M*/
5842714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
585d382aafbSBarry Smith 
586d382aafbSBarry Smith /*MC
587503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
588d382aafbSBarry Smith 
589d382aafbSBarry Smith    Synopsis:
590d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
591d382aafbSBarry Smith 
592eca87e8dSBarry Smith    Not Collective
593eca87e8dSBarry Smith 
594eca87e8dSBarry Smith    Input Parameters:
595eca87e8dSBarry Smith .  addr - address to align (any pointer type)
596eca87e8dSBarry Smith 
597d382aafbSBarry Smith    Level: developer
598d382aafbSBarry Smith 
599d382aafbSBarry Smith .seealso: PetscMallocAlign()
600d382aafbSBarry Smith 
601d382aafbSBarry Smith   Concepts: memory allocation
602d382aafbSBarry Smith M*/
603d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
604d382aafbSBarry Smith 
605d382aafbSBarry Smith /*MC
606503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
607d382aafbSBarry Smith 
608eca87e8dSBarry Smith    Synopsis:
609eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
610eca87e8dSBarry Smith 
611eca87e8dSBarry Smith    Not Collective
612eca87e8dSBarry Smith 
613d382aafbSBarry Smith    Input Parameter:
614d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
615d382aafbSBarry Smith .  t1 - type of first memory elements
616d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
617d382aafbSBarry Smith -  t2 - type of second memory elements
618d382aafbSBarry Smith 
619d382aafbSBarry Smith    Output Parameter:
620d382aafbSBarry Smith +  r1 - memory allocated in first chunk
621d382aafbSBarry Smith -  r2 - memory allocated in second chunk
622d382aafbSBarry Smith 
623d382aafbSBarry Smith    Level: developer
624d382aafbSBarry Smith 
625d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
626d382aafbSBarry Smith 
627d382aafbSBarry Smith   Concepts: memory allocation
628d382aafbSBarry Smith 
629d382aafbSBarry Smith M*/
630d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
631d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
632d382aafbSBarry Smith #else
6333b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \
634d382aafbSBarry Smith                                          || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
635d382aafbSBarry Smith #endif
636d382aafbSBarry Smith 
637d382aafbSBarry Smith /*MC
638503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
639d382aafbSBarry Smith 
640eca87e8dSBarry Smith    Synopsis:
641eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
642eca87e8dSBarry Smith 
643eca87e8dSBarry Smith    Not Collective
644eca87e8dSBarry Smith 
645d382aafbSBarry Smith    Input Parameter:
646d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
647d382aafbSBarry Smith .  t1 - type of first memory elements
648d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
649d382aafbSBarry Smith .  t2 - type of second memory elements
650d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
651d382aafbSBarry Smith -  t3 - type of third memory elements
652d382aafbSBarry Smith 
653d382aafbSBarry Smith    Output Parameter:
654d382aafbSBarry Smith +  r1 - memory allocated in first chunk
655d382aafbSBarry Smith .  r2 - memory allocated in second chunk
656d382aafbSBarry Smith -  r3 - memory allocated in third chunk
657d382aafbSBarry Smith 
658d382aafbSBarry Smith    Level: developer
659d382aafbSBarry Smith 
660d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
661d382aafbSBarry Smith 
662d382aafbSBarry Smith   Concepts: memory allocation
663d382aafbSBarry Smith 
664d382aafbSBarry Smith M*/
665d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
666d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
667d382aafbSBarry Smith #else
6683b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
669d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
670d382aafbSBarry Smith #endif
671d382aafbSBarry Smith 
672d382aafbSBarry Smith /*MC
673503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
674d382aafbSBarry Smith 
675eca87e8dSBarry Smith    Synopsis:
676eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
677eca87e8dSBarry Smith 
678eca87e8dSBarry Smith    Not Collective
679eca87e8dSBarry Smith 
680d382aafbSBarry Smith    Input Parameter:
681d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
682d382aafbSBarry Smith .  t1 - type of first memory elements
683d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
684d382aafbSBarry Smith .  t2 - type of second memory elements
685d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
686d382aafbSBarry Smith .  t3 - type of third memory elements
687d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
688d382aafbSBarry Smith -  t4 - type of fourth memory elements
689d382aafbSBarry Smith 
690d382aafbSBarry Smith    Output Parameter:
691d382aafbSBarry Smith +  r1 - memory allocated in first chunk
692d382aafbSBarry Smith .  r2 - memory allocated in second chunk
693d382aafbSBarry Smith .  r3 - memory allocated in third chunk
694d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
695d382aafbSBarry Smith 
696d382aafbSBarry Smith    Level: developer
697d382aafbSBarry Smith 
698d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
699d382aafbSBarry Smith 
700d382aafbSBarry Smith   Concepts: memory allocation
701d382aafbSBarry Smith 
702d382aafbSBarry Smith M*/
703d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
704d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
705d382aafbSBarry Smith #else
706d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
7073b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
708d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
709d382aafbSBarry Smith #endif
710d382aafbSBarry Smith 
711d382aafbSBarry Smith /*MC
712503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
713d382aafbSBarry Smith 
714eca87e8dSBarry Smith    Synopsis:
715eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
716eca87e8dSBarry Smith 
717eca87e8dSBarry Smith    Not Collective
718eca87e8dSBarry Smith 
719d382aafbSBarry Smith    Input Parameter:
720d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
721d382aafbSBarry Smith .  t1 - type of first memory elements
722d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
723d382aafbSBarry Smith .  t2 - type of second memory elements
724d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
725d382aafbSBarry Smith .  t3 - type of third memory elements
726d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
727d382aafbSBarry Smith .  t4 - type of fourth memory elements
728d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
729d382aafbSBarry Smith -  t5 - type of fifth memory elements
730d382aafbSBarry Smith 
731d382aafbSBarry Smith    Output Parameter:
732d382aafbSBarry Smith +  r1 - memory allocated in first chunk
733d382aafbSBarry Smith .  r2 - memory allocated in second chunk
734d382aafbSBarry Smith .  r3 - memory allocated in third chunk
735d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
736d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
737d382aafbSBarry Smith 
738d382aafbSBarry Smith    Level: developer
739d382aafbSBarry Smith 
740d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
741d382aafbSBarry Smith 
742d382aafbSBarry Smith   Concepts: memory allocation
743d382aafbSBarry Smith 
744d382aafbSBarry Smith M*/
745d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
746d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
747d382aafbSBarry Smith #else
748d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
7493b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
750d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
751d382aafbSBarry Smith #endif
752d382aafbSBarry Smith 
753d382aafbSBarry Smith 
754d382aafbSBarry Smith /*MC
755503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
756d382aafbSBarry Smith 
757eca87e8dSBarry Smith    Synopsis:
758eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
759eca87e8dSBarry Smith 
760eca87e8dSBarry Smith    Not Collective
761eca87e8dSBarry Smith 
762d382aafbSBarry Smith    Input Parameter:
763d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
764d382aafbSBarry Smith .  t1 - type of first memory elements
765d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
766d382aafbSBarry Smith .  t2 - type of second memory elements
767d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
768d382aafbSBarry Smith .  t3 - type of third memory elements
769d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
770d382aafbSBarry Smith .  t4 - type of fourth memory elements
771d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
772d382aafbSBarry Smith .  t5 - type of fifth memory elements
773d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
774d382aafbSBarry Smith -  t6 - type of sixth memory elements
775d382aafbSBarry Smith 
776d382aafbSBarry Smith    Output Parameter:
777d382aafbSBarry Smith +  r1 - memory allocated in first chunk
778d382aafbSBarry Smith .  r2 - memory allocated in second chunk
779d382aafbSBarry Smith .  r3 - memory allocated in third chunk
780d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
781d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
782d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
783d382aafbSBarry Smith 
784d382aafbSBarry Smith    Level: developer
785d382aafbSBarry Smith 
786d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
787d382aafbSBarry Smith 
788d382aafbSBarry Smith   Concepts: memory allocation
789d382aafbSBarry Smith 
790d382aafbSBarry Smith M*/
791d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
792d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
793d382aafbSBarry Smith #else
794d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7953b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
796d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
797d382aafbSBarry Smith #endif
798d382aafbSBarry Smith 
799d382aafbSBarry Smith /*MC
800503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
801d382aafbSBarry Smith 
802eca87e8dSBarry Smith    Synopsis:
803eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
804eca87e8dSBarry Smith 
805eca87e8dSBarry Smith    Not Collective
806eca87e8dSBarry Smith 
807d382aafbSBarry Smith    Input Parameter:
808d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
809d382aafbSBarry Smith .  t1 - type of first memory elements
810d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
811d382aafbSBarry Smith .  t2 - type of second memory elements
812d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
813d382aafbSBarry Smith .  t3 - type of third memory elements
814d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
815d382aafbSBarry Smith .  t4 - type of fourth memory elements
816d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
817d382aafbSBarry Smith .  t5 - type of fifth memory elements
818d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
819d382aafbSBarry Smith .  t6 - type of sixth memory elements
820d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
821d382aafbSBarry Smith -  t7 - type of sixth memory elements
822d382aafbSBarry Smith 
823d382aafbSBarry Smith    Output Parameter:
824d382aafbSBarry Smith +  r1 - memory allocated in first chunk
825d382aafbSBarry Smith .  r2 - memory allocated in second chunk
826d382aafbSBarry Smith .  r3 - memory allocated in third chunk
827d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
828d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
829d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
830eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
831d382aafbSBarry Smith 
832d382aafbSBarry Smith    Level: developer
833d382aafbSBarry Smith 
834d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
835d382aafbSBarry Smith 
836d382aafbSBarry Smith   Concepts: memory allocation
837d382aafbSBarry Smith 
838d382aafbSBarry Smith M*/
839d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
840d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
841d382aafbSBarry Smith #else
842d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
8433b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
844d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
845d382aafbSBarry Smith #endif
846d382aafbSBarry Smith 
847d382aafbSBarry Smith /*MC
848503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
849d382aafbSBarry Smith 
850eca87e8dSBarry Smith    Synopsis:
851eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
852eca87e8dSBarry Smith 
853eca87e8dSBarry Smith    Not Collective
854eca87e8dSBarry Smith 
855d382aafbSBarry Smith    Input Parameter:
856d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
857d382aafbSBarry Smith 
858d382aafbSBarry Smith    Output Parameter:
859d382aafbSBarry Smith .  result - memory allocated
860d382aafbSBarry Smith 
861d382aafbSBarry Smith    Level: beginner
862d382aafbSBarry Smith 
863ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
864d382aafbSBarry Smith 
865d382aafbSBarry Smith   Concepts: memory allocation
866d382aafbSBarry Smith 
867d382aafbSBarry Smith M*/
868d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
869ad0619ddSBarry Smith 
870ad0619ddSBarry Smith /*MC
871ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
872ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
873ad0619ddSBarry Smith 
874ad0619ddSBarry Smith    Synopsis:
875ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
876ad0619ddSBarry Smith 
877ad0619ddSBarry Smith    Not Collective
878ad0619ddSBarry Smith 
879ad0619ddSBarry Smith    Input Parameter:
880ad0619ddSBarry Smith +  obj - object memory is logged to
881ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
882ad0619ddSBarry Smith 
883ad0619ddSBarry Smith    Output Parameter:
884ad0619ddSBarry Smith .  result - memory allocated
885ad0619ddSBarry Smith 
886ad0619ddSBarry Smith    Level: developer
887ad0619ddSBarry Smith 
888ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
889ad0619ddSBarry Smith 
890ad0619ddSBarry Smith   Concepts: memory allocation
891ad0619ddSBarry Smith 
892ad0619ddSBarry Smith M*/
893d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
894d382aafbSBarry Smith 
895d382aafbSBarry Smith /*MC
896d382aafbSBarry Smith    PetscFree - Frees memory
897d382aafbSBarry Smith 
898eca87e8dSBarry Smith    Synopsis:
899eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
900eca87e8dSBarry Smith 
901eca87e8dSBarry Smith    Not Collective
902eca87e8dSBarry Smith 
903d382aafbSBarry Smith    Input Parameter:
904d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
905d382aafbSBarry Smith 
906d382aafbSBarry Smith    Level: beginner
907d382aafbSBarry Smith 
908d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
909d382aafbSBarry Smith 
910d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
911d382aafbSBarry Smith 
912d382aafbSBarry Smith   Concepts: memory allocation
913d382aafbSBarry Smith 
914d382aafbSBarry Smith M*/
91512537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
916d382aafbSBarry Smith 
917d382aafbSBarry Smith /*MC
918d382aafbSBarry Smith    PetscFreeVoid - Frees memory
919d382aafbSBarry Smith 
920d382aafbSBarry Smith    Synopsis:
921d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
922d382aafbSBarry Smith 
923eca87e8dSBarry Smith    Not Collective
924eca87e8dSBarry Smith 
925eca87e8dSBarry Smith    Input Parameter:
926eca87e8dSBarry Smith .   memory - memory to free
927eca87e8dSBarry Smith 
928d382aafbSBarry Smith    Level: beginner
929d382aafbSBarry Smith 
930d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
931d382aafbSBarry Smith 
932d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
933d382aafbSBarry Smith 
934d382aafbSBarry Smith   Concepts: memory allocation
935d382aafbSBarry Smith 
936d382aafbSBarry Smith M*/
9372714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
938d382aafbSBarry Smith 
939d382aafbSBarry Smith 
940d382aafbSBarry Smith /*MC
941d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
942d382aafbSBarry Smith 
943eca87e8dSBarry Smith    Synopsis:
944eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
945eca87e8dSBarry Smith 
946eca87e8dSBarry Smith    Not Collective
947eca87e8dSBarry Smith 
948d382aafbSBarry Smith    Input Parameter:
949d382aafbSBarry Smith +   memory1 - memory to free
950d382aafbSBarry Smith -   memory2 - 2nd memory to free
951d382aafbSBarry Smith 
952d382aafbSBarry Smith    Level: developer
953d382aafbSBarry Smith 
954d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
955d382aafbSBarry Smith 
956d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
957d382aafbSBarry Smith 
958d382aafbSBarry Smith   Concepts: memory allocation
959d382aafbSBarry Smith 
960d382aafbSBarry Smith M*/
961d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
962d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
963d382aafbSBarry Smith #else
96481dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
965d382aafbSBarry Smith #endif
966d382aafbSBarry Smith 
967d382aafbSBarry Smith /*MC
968d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
969d382aafbSBarry Smith 
970eca87e8dSBarry Smith    Synopsis:
971eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
972eca87e8dSBarry Smith 
973eca87e8dSBarry Smith    Not Collective
974eca87e8dSBarry Smith 
975d382aafbSBarry Smith    Input Parameter:
976d382aafbSBarry Smith +   memory1 - memory to free
977d382aafbSBarry Smith .   memory2 - 2nd memory to free
978d382aafbSBarry Smith -   memory3 - 3rd memory to free
979d382aafbSBarry Smith 
980d382aafbSBarry Smith    Level: developer
981d382aafbSBarry Smith 
982d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
983d382aafbSBarry Smith 
984d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
985d382aafbSBarry Smith 
986d382aafbSBarry Smith   Concepts: memory allocation
987d382aafbSBarry Smith 
988d382aafbSBarry Smith M*/
989d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
990d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
991d382aafbSBarry Smith #else
99281dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
993d382aafbSBarry Smith #endif
994d382aafbSBarry Smith 
995d382aafbSBarry Smith /*MC
996d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
997d382aafbSBarry Smith 
998eca87e8dSBarry Smith    Synopsis:
999eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
1000eca87e8dSBarry Smith 
1001eca87e8dSBarry Smith    Not Collective
1002eca87e8dSBarry Smith 
1003d382aafbSBarry Smith    Input Parameter:
1004d382aafbSBarry Smith +   m1 - memory to free
1005d382aafbSBarry Smith .   m2 - 2nd memory to free
1006d382aafbSBarry Smith .   m3 - 3rd memory to free
1007d382aafbSBarry Smith -   m4 - 4th memory to free
1008d382aafbSBarry Smith 
1009d382aafbSBarry Smith    Level: developer
1010d382aafbSBarry Smith 
1011d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
1012d382aafbSBarry Smith 
1013d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
1014d382aafbSBarry Smith 
1015d382aafbSBarry Smith   Concepts: memory allocation
1016d382aafbSBarry Smith 
1017d382aafbSBarry Smith M*/
1018d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1019d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1020d382aafbSBarry Smith #else
102181dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1022d382aafbSBarry Smith #endif
1023d382aafbSBarry Smith 
1024d382aafbSBarry Smith /*MC
1025d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1026d382aafbSBarry Smith 
1027eca87e8dSBarry Smith    Synopsis:
1028eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1029eca87e8dSBarry Smith 
1030eca87e8dSBarry Smith    Not Collective
1031eca87e8dSBarry Smith 
1032d382aafbSBarry Smith    Input Parameter:
1033d382aafbSBarry Smith +   m1 - memory to free
1034d382aafbSBarry Smith .   m2 - 2nd memory to free
1035d382aafbSBarry Smith .   m3 - 3rd memory to free
1036d382aafbSBarry Smith .   m4 - 4th memory to free
1037d382aafbSBarry Smith -   m5 - 5th memory to free
1038d382aafbSBarry Smith 
1039d382aafbSBarry Smith    Level: developer
1040d382aafbSBarry Smith 
1041d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
1042d382aafbSBarry Smith 
1043d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1044d382aafbSBarry Smith 
1045d382aafbSBarry Smith   Concepts: memory allocation
1046d382aafbSBarry Smith 
1047d382aafbSBarry Smith M*/
1048d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1049d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1050d382aafbSBarry Smith #else
105181dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1052d382aafbSBarry Smith #endif
1053d382aafbSBarry Smith 
1054d382aafbSBarry Smith 
1055d382aafbSBarry Smith /*MC
1056d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1057d382aafbSBarry Smith 
1058eca87e8dSBarry Smith    Synopsis:
1059eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1060eca87e8dSBarry Smith 
1061eca87e8dSBarry Smith    Not Collective
1062eca87e8dSBarry Smith 
1063d382aafbSBarry Smith    Input Parameter:
1064d382aafbSBarry Smith +   m1 - memory to free
1065d382aafbSBarry Smith .   m2 - 2nd memory to free
1066d382aafbSBarry Smith .   m3 - 3rd memory to free
1067d382aafbSBarry Smith .   m4 - 4th memory to free
1068d382aafbSBarry Smith .   m5 - 5th memory to free
1069d382aafbSBarry Smith -   m6 - 6th memory to free
1070d382aafbSBarry Smith 
1071d382aafbSBarry Smith 
1072d382aafbSBarry Smith    Level: developer
1073d382aafbSBarry Smith 
1074d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1075d382aafbSBarry Smith 
1076d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1077d382aafbSBarry Smith 
1078d382aafbSBarry Smith   Concepts: memory allocation
1079d382aafbSBarry Smith 
1080d382aafbSBarry Smith M*/
1081d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1082d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1083d382aafbSBarry Smith #else
108481dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1085d382aafbSBarry Smith #endif
1086d382aafbSBarry Smith 
1087d382aafbSBarry Smith /*MC
1088d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1089d382aafbSBarry Smith 
1090eca87e8dSBarry Smith    Synopsis:
1091eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1092eca87e8dSBarry Smith 
1093eca87e8dSBarry Smith    Not Collective
1094eca87e8dSBarry Smith 
1095d382aafbSBarry Smith    Input Parameter:
1096d382aafbSBarry Smith +   m1 - memory to free
1097d382aafbSBarry Smith .   m2 - 2nd memory to free
1098d382aafbSBarry Smith .   m3 - 3rd memory to free
1099d382aafbSBarry Smith .   m4 - 4th memory to free
1100d382aafbSBarry Smith .   m5 - 5th memory to free
1101d382aafbSBarry Smith .   m6 - 6th memory to free
1102d382aafbSBarry Smith -   m7 - 7th memory to free
1103d382aafbSBarry Smith 
1104d382aafbSBarry Smith 
1105d382aafbSBarry Smith    Level: developer
1106d382aafbSBarry Smith 
1107d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1108d382aafbSBarry Smith 
1109d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1110d382aafbSBarry Smith           PetscMalloc7()
1111d382aafbSBarry Smith 
1112d382aafbSBarry Smith   Concepts: memory allocation
1113d382aafbSBarry Smith 
1114d382aafbSBarry Smith M*/
1115d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1116d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1117d382aafbSBarry Smith #else
111881dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1119d382aafbSBarry Smith #endif
1120d382aafbSBarry Smith 
11217087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
11227087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
11237087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
11247087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1125d382aafbSBarry Smith 
1126d382aafbSBarry Smith /*
112766d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1128d382aafbSBarry Smith */
11297087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
11307087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
11317087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
11327087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
11337087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
11347087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
11357087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
1136d382aafbSBarry Smith 
1137d382aafbSBarry Smith 
1138d382aafbSBarry Smith /*E
1139d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1140d382aafbSBarry Smith 
1141d382aafbSBarry Smith    Level: beginner
1142d382aafbSBarry Smith 
1143d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1144d382aafbSBarry Smith 
1145d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1146d382aafbSBarry Smith           PetscDataTypeGetSize()
1147d382aafbSBarry Smith 
1148d382aafbSBarry Smith E*/
1149d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
115059a34000SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10} PetscDataType;
1151d382aafbSBarry Smith extern const char *PetscDataTypes[];
1152d382aafbSBarry Smith 
1153d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1154d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1155d382aafbSBarry Smith #else
1156ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1157d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
115859a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
115959a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1160d382aafbSBarry Smith #else
1161d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1162d382aafbSBarry Smith #endif
1163d382aafbSBarry Smith #endif
1164ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1165d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
116659a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
116759a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1168d382aafbSBarry Smith #else
1169d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1170d382aafbSBarry Smith #endif
1171d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1172d382aafbSBarry Smith 
11737087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11747087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11757087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1176d382aafbSBarry Smith 
1177d382aafbSBarry Smith /*
1178d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1179d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1180d382aafbSBarry Smith    functionality and/or error checking.
1181d382aafbSBarry Smith */
11827087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11837087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11847087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11857087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11867087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11877087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11887087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11897087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11907087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11917087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11927087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11937087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11947087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
11957087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
11967087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
11977087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
11987087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
11997087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
12007087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
120174722a09SBarry Smith extern PetscErrorCode    PetscStrendswith(const char[],const char[],PetscBool*);
12027ba3a57cSBarry Smith extern PetscErrorCode    PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
12037087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
12047087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1205d382aafbSBarry Smith 
1206d382aafbSBarry Smith /*S
1207d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1208d382aafbSBarry Smith 
1209d382aafbSBarry Smith   Level: intermediate
1210d382aafbSBarry Smith 
1211d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1212d382aafbSBarry Smith S*/
1213d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1214d382aafbSBarry Smith 
12157087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
12167087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
12178c74ee41SBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken*);
1218d382aafbSBarry Smith 
1219d382aafbSBarry Smith /*
1220d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1221d382aafbSBarry Smith */
12227087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
1223ce63c4c1SBarry Smith #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
12247087cfbeSBarry Smith extern  MPI_Op MPIU_SUM;
1225d382aafbSBarry Smith #else
1226d382aafbSBarry Smith #define MPIU_SUM MPI_SUM
1227d382aafbSBarry Smith #endif
1228ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128)
1229d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1230d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1231d9822059SBarry Smith #else
1232d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1233d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1234d9822059SBarry Smith #endif
12357087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1236d382aafbSBarry Smith 
1237eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1238eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1239eb3f98d2SBarry Smith 
1240d382aafbSBarry Smith /*S
1241d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1242d382aafbSBarry Smith 
1243d382aafbSBarry Smith    Level: beginner
1244d382aafbSBarry Smith 
1245d382aafbSBarry Smith    Note: This is the base class from which all objects appear.
1246d382aafbSBarry Smith 
12471890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1248d382aafbSBarry Smith S*/
1249d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1250d382aafbSBarry Smith 
1251d382aafbSBarry Smith /*S
1252d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1253d382aafbSBarry Smith       by string name
1254d382aafbSBarry Smith 
1255d382aafbSBarry Smith    Level: advanced
1256d382aafbSBarry Smith 
1257d382aafbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy()
1258d382aafbSBarry Smith S*/
1259d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1260d382aafbSBarry Smith 
1261e4d1774bSDmitry Karpeev /*S
1262e4d1774bSDmitry Karpeev      PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries,
1263e4d1774bSDmitry Karpeev                     accessed by string op name together with string argument types.
1264e4d1774bSDmitry Karpeev 
1265e4d1774bSDmitry Karpeev    Level: advanced
1266e4d1774bSDmitry Karpeev 
1267e4d1774bSDmitry Karpeev .seealso:  PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy()
1268e4d1774bSDmitry Karpeev S*/
1269e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList;
1270e4d1774bSDmitry Karpeev 
1271d382aafbSBarry Smith /*E
1272d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1273d382aafbSBarry Smith 
1274d382aafbSBarry Smith   Level: beginner
1275d382aafbSBarry Smith 
1276d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1277d382aafbSBarry Smith 
1278d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1279d382aafbSBarry Smith 
1280d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1281d382aafbSBarry Smith 
1282d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1283d382aafbSBarry Smith 
1284d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1285d382aafbSBarry Smith 
1286d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1287d382aafbSBarry Smith E*/
1288d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1289d382aafbSBarry Smith 
1290d382aafbSBarry Smith #include "petscviewer.h"
1291d382aafbSBarry Smith #include "petscoptions.h"
1292d382aafbSBarry Smith 
12930700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12947087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
12957087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
12967087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1297d382aafbSBarry Smith 
1298d382aafbSBarry Smith /*
1299d382aafbSBarry Smith    Routines that get memory usage information from the OS
1300d382aafbSBarry Smith */
13017087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
13027087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
13037087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
13047087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1305d382aafbSBarry Smith 
13067087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
13077087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
13087087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
13097087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1310d382aafbSBarry Smith 
1311d382aafbSBarry Smith /*
1312d382aafbSBarry Smith    Initialization of PETSc
1313d382aafbSBarry Smith */
13147087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
1315d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL))
13167087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
13177087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool  *);
13187087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool  *);
13197087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
132009573ac7SBarry Smith extern PetscErrorCode  PetscInitializeFortran(void);
13217087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
13227087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
13237087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1324d382aafbSBarry Smith 
13257087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
13267087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1327d382aafbSBarry Smith 
1328d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
132985afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
133085afcc9aSBarry Smith extern PetscErrorCode  PetscHMPISpawn(PetscMPIInt);
133185afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFinalize(void);
133285afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
133385afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
133485afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFree(MPI_Comm,void*);
133585afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMalloc(MPI_Comm,size_t,void**);
1336d382aafbSBarry Smith 
13377087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
13387087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
13397087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
13405180491cSLisandro Dalcin extern PetscErrorCode  PetscPythonMonitorSet(PetscObject,const char[]);
1341d382aafbSBarry Smith 
1342d382aafbSBarry Smith /*
1343d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
1344d382aafbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be
1345d382aafbSBarry Smith    C++.
1346d382aafbSBarry Smith */
1347d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1348d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1349d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1350d382aafbSBarry Smith 
1351d382aafbSBarry Smith /*
1352d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1353d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1354503cfb0cSBarry Smith 
1355503cfb0cSBarry Smith    Level: developer
1356503cfb0cSBarry Smith 
1357503cfb0cSBarry Smith .seealso: PetscUseMethod()
1358d382aafbSBarry Smith */
1359d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1360d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1361d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1362d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1363d382aafbSBarry Smith   }
1364503cfb0cSBarry Smith 
1365503cfb0cSBarry Smith /*
1366503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1367503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1368503cfb0cSBarry Smith 
1369503cfb0cSBarry Smith    Level: developer
1370503cfb0cSBarry Smith 
1371503cfb0cSBarry Smith .seealso: PetscTryMethod()
1372503cfb0cSBarry Smith */
1373d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1374d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1375d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1376d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1377703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1378d382aafbSBarry Smith   }
1379503cfb0cSBarry Smith 
1380d382aafbSBarry Smith /*
1381d382aafbSBarry Smith     Functions that can act on any PETSc object.
1382d382aafbSBarry Smith */
1383fcfd50ebSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject*);
13847087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13857087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
1386609db0e0SLisandro Dalcin extern PetscErrorCode  PetscObjectGetClassName(PetscObject,const char *[]);
13877087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13887087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13897087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13907087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13917087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13927087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13937087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13947087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
13957087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
13967087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
13977087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
13987087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
13997087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
14007087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
14017087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
14026ba4bc90SBarry Smith extern PetscErrorCode  PetscObjectRemoveReference(PetscObject,const char[]);
14037087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
14047087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
14057087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
14067087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
14077087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
14087087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
14097087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
14107087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
1411d382aafbSBarry Smith 
1412d382aafbSBarry Smith /*MC
1413d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1414d382aafbSBarry Smith 
1415eca87e8dSBarry Smith     Synopsis:
1416eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1417eca87e8dSBarry Smith 
1418ad4df100SBarry Smith    Logically Collective on PetscObject
1419d382aafbSBarry Smith 
1420d382aafbSBarry Smith    Input Parameters:
1421d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1422d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1423d382aafbSBarry Smith .  name - name associated with the child function
1424d382aafbSBarry Smith .  fname - name of the function
1425d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1426d382aafbSBarry Smith 
1427d382aafbSBarry Smith    Level: advanced
1428d382aafbSBarry Smith 
1429d382aafbSBarry Smith 
1430d382aafbSBarry Smith    Notes:
1431d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1432d382aafbSBarry Smith 
1433d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1434d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1435d382aafbSBarry Smith 
1436d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
143720de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1438d382aafbSBarry Smith    enabled.
1439d382aafbSBarry Smith 
1440d382aafbSBarry Smith    Concepts: objects^composing functions
1441d382aafbSBarry Smith    Concepts: composing functions
1442d382aafbSBarry Smith    Concepts: functions^querying
1443d382aafbSBarry Smith    Concepts: objects^querying
1444d382aafbSBarry Smith    Concepts: querying objects
1445d382aafbSBarry Smith 
1446d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1447d382aafbSBarry Smith M*/
1448d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1449d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1450d382aafbSBarry Smith #else
1451d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1452d382aafbSBarry Smith #endif
1453d382aafbSBarry Smith 
14547087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
14557087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
14567087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
14577087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
14587087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
14597087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
14607087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
14617087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
14627087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
14637087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
14647087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
14657087cfbeSBarry Smith extern PetscErrorCode  PetscTypeCompare(PetscObject,const char[],PetscBool *);
14662b12f010SJed Brown extern PetscErrorCode  PetscTypeCompareAny(PetscObject,PetscBool*,const char[],...);
14677087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
14687087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1469d382aafbSBarry Smith 
1470d382aafbSBarry Smith /*
1471d382aafbSBarry Smith     Defines PETSc error handling.
1472d382aafbSBarry Smith */
1473d382aafbSBarry Smith #include "petscerror.h"
1474d382aafbSBarry Smith 
1475d382aafbSBarry Smith /*S
1476503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1477d382aafbSBarry Smith 
14781d0fab5eSBarry Smith    Level: developer
1479d382aafbSBarry Smith 
14801d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14811d0fab5eSBarry Smith 
14821d0fab5eSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery()
1483d382aafbSBarry Smith S*/
1484d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1485d382aafbSBarry Smith 
1486fcfd50ebSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList*);
14877087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
1488bfec8eecSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
14897087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14906ba4bc90SBarry Smith extern PetscErrorCode  PetscOListRemoveReference(PetscOList *,const char[]);
14917087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1492d382aafbSBarry Smith 
1493d382aafbSBarry Smith /*
1494503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1495d382aafbSBarry Smith   link libraries that will be loaded as needed.
1496d382aafbSBarry Smith */
14977087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
14987087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
14994b91b6eaSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
15007087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1501d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1502d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1503d382aafbSBarry Smith #else
1504d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1505d382aafbSBarry Smith #endif
15067087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
15077087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
15087087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
15097087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1510d382aafbSBarry Smith 
1511*48703020SDmitry Karpeev /*
1512*48703020SDmitry Karpeev     Multiple dispatch operation function lists. Lists of names of routines with corresponding
1513*48703020SDmitry Karpeev     argument type names with function pointers or in dynamic link libraries that will be loaded
1514*48703020SDmitry Karpeev     as needed.  Search on the op name and argument type names.
1515*48703020SDmitry Karpeev */
1516*48703020SDmitry Karpeev typedef void (*PetscOpF)(void);
1517*48703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscOpF, const char[], PetscInt, char*[]);
1518*48703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListDestroy(PetscOpFList*);
1519*48703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListFind(MPI_Comm, PetscOpFList, PetscOpF*, const char[], PetscInt, char*[]);
1520*48703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListView(PetscOpFList,PetscViewer);
1521d382aafbSBarry Smith /*S
1522d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1523d382aafbSBarry Smith 
1524d382aafbSBarry Smith    Level: advanced
1525d382aafbSBarry Smith 
152620de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1527d382aafbSBarry Smith 
1528d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1529d382aafbSBarry Smith S*/
1530d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
15317087cfbeSBarry Smith extern  PetscDLLibrary DLLibrariesLoaded;
15327087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
15337087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
15347087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
15357087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
15367087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
15377087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
15387087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
15397087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1540d382aafbSBarry Smith 
1541d382aafbSBarry Smith /*
154205846914SDmitry Karpeev   PetscFwk support.  Needs to be documented.
154305846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
154405846914SDmitry Karpeev */
154505846914SDmitry Karpeev #include "petscfwk.h"
154605846914SDmitry Karpeev 
154705846914SDmitry Karpeev /*
1548d382aafbSBarry Smith      Useful utility routines
1549d382aafbSBarry Smith */
15507087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
15517087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
15527087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1553d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1))
1554d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1))
15557087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1556d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1))
1557d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1))
15587087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
15597087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1560d382aafbSBarry Smith 
1561503cfb0cSBarry Smith /*
1562ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1563503cfb0cSBarry Smith 
1564503cfb0cSBarry Smith     Notes: This is useful in cases like
1565503cfb0cSBarry Smith $     int        *a;
1566ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1567ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1568503cfb0cSBarry Smith */
1569d382aafbSBarry Smith  #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1570503cfb0cSBarry Smith 
1571d382aafbSBarry Smith /*
1572d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1573d382aafbSBarry Smith */
1574d382aafbSBarry Smith #include "petscdraw.h"
1575d382aafbSBarry Smith 
1576d382aafbSBarry Smith /*
1577d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1578d382aafbSBarry Smith */
1579d382aafbSBarry Smith #include "private/petscimpl.h"
1580503cfb0cSBarry Smith 
1581238ccf28SShri Abhyankar 
1582d382aafbSBarry Smith /*MC
1583d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1584d382aafbSBarry Smith 
1585d382aafbSBarry Smith    Synopsis:
1586d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1587d382aafbSBarry Smith 
1588eca87e8dSBarry Smith     Not Collective
1589eca87e8dSBarry Smith 
1590d382aafbSBarry Smith     Input Parameters:
1591d382aafbSBarry Smith .   format - the usual printf() format string
1592d382aafbSBarry Smith 
1593d382aafbSBarry Smith    Options Database Keys:
1594d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1595d382aafbSBarry Smith          (default) stderr
1596d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1597d382aafbSBarry Smith           error is handled.)
1598d382aafbSBarry Smith 
1599d382aafbSBarry Smith    Notes: Use
1600d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1601d382aafbSBarry Smith $                        error is handled.) and
1602d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1603c9a19010SBarry Smith $        of you can use your own function
1604d382aafbSBarry Smith 
1605d382aafbSBarry Smith           Use
1606d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1607d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1608d382aafbSBarry Smith 
1609d382aafbSBarry Smith           Use
1610d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1611d382aafbSBarry Smith 
1612d382aafbSBarry Smith    Level: developer
1613d382aafbSBarry Smith 
1614d382aafbSBarry Smith     Fortran Note:
1615d382aafbSBarry Smith     This routine is not supported in Fortran.
1616d382aafbSBarry Smith 
1617d382aafbSBarry Smith     Concepts: error messages^printing
1618d382aafbSBarry Smith     Concepts: printing^error messages
1619d382aafbSBarry Smith 
1620c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1621d382aafbSBarry Smith M*/
16227087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1623d382aafbSBarry Smith 
1624d382aafbSBarry Smith /*MC
1625d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1626d382aafbSBarry Smith 
1627d382aafbSBarry Smith    Synopsis:
1628d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1629d382aafbSBarry Smith 
1630eca87e8dSBarry Smith     Not Collective
1631eca87e8dSBarry Smith 
1632d382aafbSBarry Smith     Input Parameters:
1633d382aafbSBarry Smith .   format - the usual printf() format string
1634d382aafbSBarry Smith 
1635d382aafbSBarry Smith    Level: developer
1636d382aafbSBarry Smith 
1637d382aafbSBarry Smith     Fortran Note:
1638d382aafbSBarry Smith     This routine is not supported in Fortran.
1639d382aafbSBarry Smith 
1640d382aafbSBarry Smith     Concepts: help messages^printing
1641d382aafbSBarry Smith     Concepts: printing^help messages
1642d382aafbSBarry Smith 
1643d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1644d382aafbSBarry Smith M*/
16457087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1646d382aafbSBarry Smith 
1647fcfd50ebSBarry Smith /*
1648fcfd50ebSBarry Smith      Defines PETSc profiling.
1649fcfd50ebSBarry Smith */
1650fcfd50ebSBarry Smith #include "petsclog.h"
1651fcfd50ebSBarry Smith 
1652fcfd50ebSBarry Smith /*
1653fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1654fcfd50ebSBarry Smith */
1655fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1656fcfd50ebSBarry Smith extern PetscBool  PetscAMSPublishAll;
1657fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1658fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1659fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1660fcfd50ebSBarry Smith #else
1661fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1662fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1663fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1664fcfd50ebSBarry Smith #endif
1665fcfd50ebSBarry Smith 
1666fcfd50ebSBarry Smith /*
1667fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1668fcfd50ebSBarry Smith */
1669fcfd50ebSBarry Smith extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1670fcfd50ebSBarry Smith extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1671fcfd50ebSBarry Smith extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1672fcfd50ebSBarry Smith extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1673fcfd50ebSBarry Smith extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1674fcfd50ebSBarry Smith extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1675257d2499SJed Brown extern PetscErrorCode   PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1676fcfd50ebSBarry Smith 
1677fcfd50ebSBarry Smith 
1678fcfd50ebSBarry Smith 
1679fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1680fcfd50ebSBarry Smith #include <stdarg.h>
1681fcfd50ebSBarry Smith extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1682fcfd50ebSBarry Smith extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1683fcfd50ebSBarry Smith extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
1684fcfd50ebSBarry Smith 
1685fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1686fcfd50ebSBarry Smith extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1687fcfd50ebSBarry Smith #endif
1688fcfd50ebSBarry Smith 
168909573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
169009573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
169109573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1692d382aafbSBarry Smith 
1693d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16947087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16957087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1696d382aafbSBarry Smith #endif
1697d382aafbSBarry Smith 
16987087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
16997087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
17007087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
17017087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
17027087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
17037087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
17047087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1705d382aafbSBarry Smith 
17067087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1707d382aafbSBarry Smith 
1708d382aafbSBarry Smith /*S
1709d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1710d382aafbSBarry Smith 
1711d382aafbSBarry Smith    Level: advanced
1712d382aafbSBarry Smith 
1713d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1714d382aafbSBarry Smith S*/
17157087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1716d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
17177087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
17187087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
1719fcfd50ebSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer*);
17207087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
17217087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1722d382aafbSBarry Smith 
1723d382aafbSBarry Smith /*
1724d382aafbSBarry Smith    For use in debuggers
1725d382aafbSBarry Smith */
17267087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
17277087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
17287087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
17297087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
17307087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1731d382aafbSBarry Smith 
1732d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1733d382aafbSBarry Smith #include <memory.h>
1734d382aafbSBarry Smith #endif
1735d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1736d382aafbSBarry Smith #include <stdlib.h>
1737d382aafbSBarry Smith #endif
1738d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1739d382aafbSBarry Smith #include <strings.h>
1740d382aafbSBarry Smith #endif
1741d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1742d382aafbSBarry Smith #include <string.h>
1743d382aafbSBarry Smith #endif
17446c7e564aSBarry Smith 
17456c7e564aSBarry Smith 
1746d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H)
1747d382aafbSBarry Smith #include <xmmintrin.h>
1748d382aafbSBarry Smith #endif
1749d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1750d382aafbSBarry Smith #include <stdint.h>
1751d382aafbSBarry Smith #endif
1752d382aafbSBarry Smith 
1753fcfd50ebSBarry Smith #undef __FUNCT__
1754fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1755d382aafbSBarry Smith /*@C
1756d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1757d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1758d382aafbSBarry Smith    PetscMemmove() in that case.
1759d382aafbSBarry Smith 
1760d382aafbSBarry Smith    Not Collective
1761d382aafbSBarry Smith 
1762d382aafbSBarry Smith    Input Parameters:
1763d382aafbSBarry Smith +  b - pointer to initial memory space
1764d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1765d382aafbSBarry Smith 
1766d382aafbSBarry Smith    Output Parameter:
1767d382aafbSBarry Smith .  a - pointer to copy space
1768d382aafbSBarry Smith 
1769d382aafbSBarry Smith    Level: intermediate
1770d382aafbSBarry Smith 
1771d382aafbSBarry Smith    Compile Option:
1772d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1773d382aafbSBarry Smith                                   for memory copies on double precision values.
1774d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1775d382aafbSBarry Smith                                   for memory copies on double precision values.
1776d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1777d382aafbSBarry Smith                                   for memory copies on double precision values.
1778d382aafbSBarry Smith 
1779d382aafbSBarry Smith    Note:
1780d382aafbSBarry Smith    This routine is analogous to memcpy().
1781d382aafbSBarry Smith 
1782503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1783503cfb0cSBarry Smith 
1784d382aafbSBarry Smith   Concepts: memory^copying
1785d382aafbSBarry Smith   Concepts: copying^memory
1786d382aafbSBarry Smith 
1787d382aafbSBarry Smith .seealso: PetscMemmove()
1788d382aafbSBarry Smith 
1789d382aafbSBarry Smith @*/
17907087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1791d382aafbSBarry Smith {
1792d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1793d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1794d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1795a7e36092SMatthew G Knepley   PetscFunctionBegin;
1796e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1797e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1798a7e36092SMatthew G Knepley #else
1799d382aafbSBarry Smith   PetscFunctionBegin;
1800a7e36092SMatthew G Knepley #endif
1801d382aafbSBarry Smith   if (a != b) {
1802d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1803d382aafbSBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl) {
1804e32f2f54SBarry Smith       SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1805d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1806d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1807d382aafbSBarry Smith     }
1808d382aafbSBarry Smith #endif
1809d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1810d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1811d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1812d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1813d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1814d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1815d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1816d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1817d382aafbSBarry Smith #else
1818d382aafbSBarry Smith       size_t      i;
1819d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1820d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1821d382aafbSBarry Smith #endif
1822d382aafbSBarry Smith     } else {
1823d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1824d382aafbSBarry Smith     }
1825d382aafbSBarry Smith #else
1826d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1827d382aafbSBarry Smith #endif
1828d382aafbSBarry Smith   }
1829d382aafbSBarry Smith   PetscFunctionReturn(0);
1830d382aafbSBarry Smith }
1831d382aafbSBarry Smith 
1832d382aafbSBarry Smith /*@C
1833d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1834d382aafbSBarry Smith 
1835d382aafbSBarry Smith    Not Collective
1836d382aafbSBarry Smith 
1837d382aafbSBarry Smith    Input Parameters:
1838d382aafbSBarry Smith +  a - pointer to beginning memory location
1839d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1840d382aafbSBarry Smith 
1841d382aafbSBarry Smith    Level: intermediate
1842d382aafbSBarry Smith 
1843d382aafbSBarry Smith    Compile Option:
1844d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1845d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1846d382aafbSBarry Smith 
1847503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1848503cfb0cSBarry Smith 
1849d382aafbSBarry Smith    Concepts: memory^zeroing
1850d382aafbSBarry Smith    Concepts: zeroing^memory
1851d382aafbSBarry Smith 
1852d382aafbSBarry Smith .seealso: PetscMemcpy()
1853d382aafbSBarry Smith @*/
18547087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1855d382aafbSBarry Smith {
1856d382aafbSBarry Smith   if (n > 0) {
1857d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1858e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1859d382aafbSBarry Smith #endif
1860d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1861d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1862d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1863d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1864d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1865d382aafbSBarry Smith     } else {
1866d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1867d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1868d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1869d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1870d382aafbSBarry Smith     } else {
1871d382aafbSBarry Smith #endif
1872d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1873d382aafbSBarry Smith       bzero((char *)a,n);
1874d382aafbSBarry Smith #else
1875d382aafbSBarry Smith       memset((char*)a,0,n);
1876d382aafbSBarry Smith #endif
1877d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1878d382aafbSBarry Smith     }
1879d382aafbSBarry Smith #endif
1880d382aafbSBarry Smith   }
1881d382aafbSBarry Smith   return 0;
1882d382aafbSBarry Smith }
1883d382aafbSBarry Smith 
1884d382aafbSBarry Smith /*MC
1885d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1886d382aafbSBarry Smith 
1887eca87e8dSBarry Smith    Synopsis:
1888eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1889eca87e8dSBarry Smith 
1890d382aafbSBarry Smith    Not Collective
1891d382aafbSBarry Smith 
1892d382aafbSBarry Smith    Input Parameters:
1893d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1894d382aafbSBarry Smith .  n - number of elements to fetch
1895d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
189650d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1897d382aafbSBarry Smith 
1898d382aafbSBarry Smith    Level: developer
1899d382aafbSBarry Smith 
1900d382aafbSBarry Smith    Notes:
1901d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1902d382aafbSBarry Smith 
190350d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
190450d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
190550d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
190663cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
190763cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
190863cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1909d382aafbSBarry Smith 
1910d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1911d382aafbSBarry Smith    address).
1912d382aafbSBarry Smith 
1913d382aafbSBarry Smith    Concepts: memory
1914d382aafbSBarry Smith M*/
1915d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1916d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1917d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1918d382aafbSBarry Smith   } while (0)
1919d382aafbSBarry Smith 
1920d382aafbSBarry Smith /*
1921e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1922d382aafbSBarry Smith */
1923d382aafbSBarry Smith #include "petscmatlab.h"
1924d382aafbSBarry Smith 
1925d382aafbSBarry Smith /*
1926d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1927d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1928d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1929d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1930e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1931d382aafbSBarry Smith */
1932d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1933d382aafbSBarry Smith 
1934d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1935d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1936d382aafbSBarry Smith #endif
1937d382aafbSBarry Smith 
19385a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
19395a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1940d382aafbSBarry Smith #endif
1941d382aafbSBarry Smith 
1942d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1943d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1944d382aafbSBarry Smith #endif
1945d382aafbSBarry Smith 
1946d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1947d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1948d382aafbSBarry Smith #endif
1949d382aafbSBarry Smith 
1950d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1951d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1952d382aafbSBarry Smith #endif
1953d382aafbSBarry Smith 
1954d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1955d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1956d382aafbSBarry Smith #endif
1957d382aafbSBarry Smith 
1958d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1959d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1960d382aafbSBarry Smith #endif
1961d382aafbSBarry Smith 
1962d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1963d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1964d382aafbSBarry Smith #endif
1965d382aafbSBarry Smith 
1966d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1967d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1968d382aafbSBarry Smith #endif
1969d382aafbSBarry Smith 
1970d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1971d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1972d382aafbSBarry Smith #endif
1973d382aafbSBarry Smith 
1974d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1975d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1976d382aafbSBarry Smith #endif
1977d382aafbSBarry Smith 
1978d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1979d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1980d382aafbSBarry Smith #endif
1981d382aafbSBarry Smith 
1982d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1983d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1984d382aafbSBarry Smith #endif
1985d382aafbSBarry Smith 
1986d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1987d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1988d382aafbSBarry Smith #endif
1989d382aafbSBarry Smith 
1990d382aafbSBarry Smith #endif
1991d382aafbSBarry Smith 
1992d382aafbSBarry Smith /*
1993d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1994d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1995d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1996d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1997d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1998d382aafbSBarry Smith */
1999d382aafbSBarry Smith #if defined(__cplusplus)
2000d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
2001d382aafbSBarry Smith #define EXTERN_C_END }
2002d382aafbSBarry Smith #else
2003d382aafbSBarry Smith #define EXTERN_C_BEGIN
2004d382aafbSBarry Smith #define EXTERN_C_END
2005d382aafbSBarry Smith #endif
2006d382aafbSBarry Smith 
2007d382aafbSBarry Smith /* --------------------------------------------------------------------*/
2008d382aafbSBarry Smith 
2009d382aafbSBarry Smith /*MC
2010d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
2011d382aafbSBarry Smith         communication
2012d382aafbSBarry Smith 
2013d382aafbSBarry Smith    Level: beginner
2014d382aafbSBarry Smith 
2015d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
2016d382aafbSBarry Smith 
2017d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
2018d382aafbSBarry Smith M*/
2019d382aafbSBarry Smith 
2020d382aafbSBarry Smith /*MC
2021d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
2022d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
2023d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
2024d382aafbSBarry Smith 
2025d382aafbSBarry Smith 
2026d382aafbSBarry Smith    Level: beginner
2027d382aafbSBarry Smith 
2028d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
2029d382aafbSBarry Smith M*/
2030d382aafbSBarry Smith 
2031d382aafbSBarry Smith /*MC
2032d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
2033d382aafbSBarry Smith 
2034d382aafbSBarry Smith    Level: beginner
2035d382aafbSBarry Smith 
2036d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
2037d382aafbSBarry Smith M*/
2038d382aafbSBarry Smith 
2039d382aafbSBarry Smith /*MC
2040d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
2041d382aafbSBarry Smith    Level: beginner
2042d382aafbSBarry Smith 
2043d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
2044d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2045d382aafbSBarry Smith 
2046d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
2047d382aafbSBarry Smith M*/
2048d382aafbSBarry Smith 
2049d382aafbSBarry Smith /*MC
2050d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
2051d382aafbSBarry Smith 
2052d382aafbSBarry Smith    Level: beginner
2053d382aafbSBarry Smith 
2054d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
2055d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2056d382aafbSBarry Smith 
2057d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2058d382aafbSBarry Smith M*/
2059d382aafbSBarry Smith 
2060d382aafbSBarry Smith /*MC
2061d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2062d382aafbSBarry Smith 
2063d382aafbSBarry Smith    Level: beginner
2064d382aafbSBarry Smith 
2065d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2066d382aafbSBarry Smith           pass this value
2067d382aafbSBarry Smith 
2068d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2069d382aafbSBarry Smith M*/
2070d382aafbSBarry Smith 
2071d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2072d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2073d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2074d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2075d382aafbSBarry Smith #else
2076d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2077d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2078d382aafbSBarry Smith #endif
2079d382aafbSBarry Smith #endif
2080d382aafbSBarry Smith 
2081d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2082d382aafbSBarry Smith 
2083d382aafbSBarry Smith /* Limit MPI to 32-bits */
2084d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2085d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2086d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2087d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2088d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2089d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2090d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2091d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2092d382aafbSBarry Smith 
2093d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2094e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2095e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2096eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2097eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2098d382aafbSBarry Smith 
2099d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2100e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2101eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2102d382aafbSBarry Smith #else
2103d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2104d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2105d382aafbSBarry Smith #endif
2106d382aafbSBarry Smith 
2107d382aafbSBarry Smith #else
2108d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2109d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2110d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2111d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2112d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2113d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2114d382aafbSBarry Smith #endif
2115d382aafbSBarry Smith 
2116d382aafbSBarry Smith 
2117d382aafbSBarry Smith /*
2118d382aafbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used
2119d382aafbSBarry Smith    as a regular user variable.
2120d382aafbSBarry Smith */
2121d382aafbSBarry Smith #if defined(hz)
2122d382aafbSBarry Smith #undef hz
2123d382aafbSBarry Smith #endif
2124d382aafbSBarry Smith 
2125d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2126d382aafbSBarry Smith 
2127d382aafbSBarry Smith 
2128d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2129d382aafbSBarry Smith #include <limits.h>
2130d382aafbSBarry Smith #endif
2131d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2132d382aafbSBarry Smith #include <sys/param.h>
2133d382aafbSBarry Smith #endif
2134d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2135d382aafbSBarry Smith #include <sys/types.h>
2136d382aafbSBarry Smith #endif
2137d382aafbSBarry Smith #if defined(MAXPATHLEN)
2138d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2139d382aafbSBarry Smith #elif defined(MAX_PATH)
2140d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2141d382aafbSBarry Smith #elif defined(_MAX_PATH)
2142d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2143d382aafbSBarry Smith #else
2144d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2145d382aafbSBarry Smith #endif
2146d382aafbSBarry Smith 
2147d382aafbSBarry Smith /* Special support for C++ */
2148d382aafbSBarry Smith #include "petscsys.hh"
21496c7e564aSBarry Smith 
2150d382aafbSBarry Smith 
2151d382aafbSBarry Smith /*MC
2152d382aafbSBarry Smith 
2153d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2154d382aafbSBarry Smith 
2155d382aafbSBarry Smith $    1) classic Fortran 77 style
2156d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2157d382aafbSBarry Smith $       XXX variablename
2158d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2159d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2160d382aafbSBarry Smith $
2161d382aafbSBarry Smith $    2) classic Fortran 90 style
2162d1716517SSatish Balay $#include "finclude/petscXXX.h"
2163d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2164d382aafbSBarry Smith $       XXX variablename
2165d382aafbSBarry Smith $
2166d382aafbSBarry Smith $    3) Using Fortran modules
2167d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2168d382aafbSBarry Smith $         use petscXXXX
2169d382aafbSBarry Smith $       XXX variablename
2170d382aafbSBarry Smith $
2171d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2172d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2173d382aafbSBarry Smith $         use petscXXXX
2174d382aafbSBarry Smith $       type(XXX) variablename
2175e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2176d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2177d382aafbSBarry Smith 
2178d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2179d382aafbSBarry Smith 
2180d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2181d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2182d382aafbSBarry Smith $        integer variablename
2183d382aafbSBarry Smith $
2184d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2185d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2186d382aafbSBarry Smith 
2187d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2188d382aafbSBarry Smith for only a few PETSc functions.
2189d382aafbSBarry Smith 
2190d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2191d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2192d382aafbSBarry Smith you cannot have something like
2193d382aafbSBarry Smith $      PetscInt row,col
2194d382aafbSBarry Smith $      PetscScalar val
2195d382aafbSBarry Smith $        ...
2196d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2197d382aafbSBarry Smith You must instead have
2198d382aafbSBarry Smith $      PetscInt row(1),col(1)
2199d382aafbSBarry Smith $      PetscScalar val(1)
2200d382aafbSBarry Smith $        ...
2201d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2202d382aafbSBarry Smith 
2203d382aafbSBarry Smith 
2204d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2205d382aafbSBarry Smith 
2206d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2207d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2208d382aafbSBarry Smith 
2209d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2210d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2211d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2212d382aafbSBarry Smith 
2213d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2214e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2215d382aafbSBarry Smith 
2216d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2217d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2218d382aafbSBarry Smith 
2219d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2220d382aafbSBarry Smith      automatically by "make allfortranstubs".
2221d382aafbSBarry Smith 
2222e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2223d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2224d382aafbSBarry Smith      include their predecessors
2225d382aafbSBarry Smith 
2226d382aafbSBarry Smith     Level: beginner
2227d382aafbSBarry Smith 
2228d382aafbSBarry Smith M*/
2229d382aafbSBarry Smith 
22307087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
22317087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
22327087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
22337087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
22347087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
22357087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2236d382aafbSBarry Smith 
22377087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
22387087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
22397087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
22407087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
22417087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2242d7aa01a8SHong Zhang extern PetscErrorCode  PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
22437087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
22447087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
22457087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
22467087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
22477087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
22487087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
22497087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
22509b67c4b3SDmitry Karpeev extern PetscErrorCode  PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2251d382aafbSBarry Smith 
22527087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
22537087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2254d382aafbSBarry Smith 
225576bdecfbSBarry Smith /*J
2256d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2257d382aafbSBarry Smith        with an optional dynamic library name, for example
2258d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2259d382aafbSBarry Smith 
2260d382aafbSBarry Smith    Level: beginner
2261d382aafbSBarry Smith 
2262e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2263d382aafbSBarry Smith    with the option --download-sprng
2264d382aafbSBarry Smith 
2265d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
226676bdecfbSBarry Smith J*/
2267d382aafbSBarry Smith #define PetscRandomType char*
2268d382aafbSBarry Smith #define PETSCRAND       "rand"
2269d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2270d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2271d382aafbSBarry Smith 
2272d382aafbSBarry Smith /* Logging support */
22737087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2274d382aafbSBarry Smith 
22757087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2276d382aafbSBarry Smith 
2277d382aafbSBarry Smith /*S
2278d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2279d382aafbSBarry Smith 
2280d382aafbSBarry Smith    Level: intermediate
2281d382aafbSBarry Smith 
2282d382aafbSBarry Smith   Concepts: random numbers
2283d382aafbSBarry Smith 
2284d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2285d382aafbSBarry Smith S*/
2286d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2287d382aafbSBarry Smith 
2288d382aafbSBarry Smith /* Dynamic creation and loading functions */
2289d382aafbSBarry Smith extern PetscFList PetscRandomList;
2290ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2291d382aafbSBarry Smith 
22927087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22937087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22947087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
22957087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
22967087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
22977087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
22987087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
22997087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2300d382aafbSBarry Smith 
2301d382aafbSBarry Smith /*MC
2302d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2303d382aafbSBarry Smith 
2304d382aafbSBarry Smith   Synopsis:
23051890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2306d382aafbSBarry Smith 
2307d382aafbSBarry Smith   Not Collective
2308d382aafbSBarry Smith 
2309d382aafbSBarry Smith   Input Parameters:
2310d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2311d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2312d382aafbSBarry Smith . func_name   - The name of routine to create method context
2313d382aafbSBarry Smith - create_func - The creation routine itself
2314d382aafbSBarry Smith 
2315d382aafbSBarry Smith   Notes:
2316d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2317d382aafbSBarry Smith 
2318d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2319d382aafbSBarry Smith 
2320d382aafbSBarry Smith   Sample usage:
2321d382aafbSBarry Smith .vb
2322d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2323d382aafbSBarry Smith .ve
2324d382aafbSBarry Smith 
2325d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2326d382aafbSBarry Smith .vb
2327d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2328d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2329d382aafbSBarry Smith .ve
2330d382aafbSBarry Smith    or at runtime via the option
2331d382aafbSBarry Smith .vb
2332d382aafbSBarry Smith     -random_type my_random_name
2333d382aafbSBarry Smith .ve
2334d382aafbSBarry Smith 
2335d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2336d382aafbSBarry Smith 
2337d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2338d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2339d382aafbSBarry Smith 
2340d382aafbSBarry Smith   Level: advanced
2341d382aafbSBarry Smith 
2342d382aafbSBarry Smith .keywords: PetscRandom, register
2343d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2344d382aafbSBarry Smith M*/
2345d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2346d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2347d382aafbSBarry Smith #else
2348d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2349d382aafbSBarry Smith #endif
2350d382aafbSBarry Smith 
23517087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
23527087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
23537087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
23547087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
23557087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
23567087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
23577087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
23587087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
2359fcfd50ebSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom*);
2360d382aafbSBarry Smith 
23617087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
23627087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
23637087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
23647087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
23657087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
23667087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
23677087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2368d382aafbSBarry Smith 
23697087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
23707087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
23717087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
23727087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
23737087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
23747087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
23757087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
23767087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
23777087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
23787087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
23797087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
23807087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
23817087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2382d382aafbSBarry Smith 
2383d382aafbSBarry Smith /*
2384d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2385d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2386d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2387d382aafbSBarry Smith   PetscBinarySeek().
2388d382aafbSBarry Smith */
2389d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2390d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2391d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2392d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2393d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2394d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2395d382aafbSBarry Smith 
2396d382aafbSBarry Smith /*E
2397d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2398d382aafbSBarry Smith 
2399d382aafbSBarry Smith   Level: advanced
2400d382aafbSBarry Smith 
2401d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2402d382aafbSBarry Smith E*/
2403d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
24047087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
24057087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
240646090da6SBarry Smith extern PetscErrorCode  PetscByteSwap(void *,PetscDataType,PetscInt);
2407d382aafbSBarry Smith 
24087087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
24097087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
24107087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
24117087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(char*);
24127087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
24137087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2414d382aafbSBarry Smith 
24157087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
24167087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
24177087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
24187087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
24197087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2420d382aafbSBarry Smith 
24217087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2422d382aafbSBarry Smith 
2423d382aafbSBarry Smith /*E
2424d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2425d382aafbSBarry Smith 
2426d382aafbSBarry Smith   Level: beginner
2427d382aafbSBarry Smith 
2428d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2429d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2430d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2431d382aafbSBarry Smith E*/
243211f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2433d382aafbSBarry Smith 
2434d382aafbSBarry Smith /*MC
2435d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2436d382aafbSBarry Smith 
2437d382aafbSBarry Smith     Level: beginner
2438d382aafbSBarry Smith 
2439d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2440eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2441eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2442d382aafbSBarry Smith 
2443d382aafbSBarry Smith M*/
2444d382aafbSBarry Smith 
2445d382aafbSBarry Smith /*MC
2446d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2447d382aafbSBarry Smith                 value into that location
2448d382aafbSBarry Smith 
2449d382aafbSBarry Smith     Level: beginner
2450d382aafbSBarry Smith 
2451d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2452eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2453eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2454d382aafbSBarry Smith 
2455d382aafbSBarry Smith M*/
2456d382aafbSBarry Smith 
2457d382aafbSBarry Smith /*MC
2458d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2459d382aafbSBarry Smith 
2460d382aafbSBarry Smith     Level: beginner
2461d382aafbSBarry Smith 
2462d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2463d382aafbSBarry Smith 
2464d382aafbSBarry Smith M*/
2465d382aafbSBarry Smith 
2466d382aafbSBarry Smith /*S
2467d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2468d382aafbSBarry Smith 
2469d382aafbSBarry Smith    Level: advanced
2470d382aafbSBarry Smith 
2471d382aafbSBarry Smith    Concepts: communicator, create
2472d382aafbSBarry Smith S*/
2473d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2474d382aafbSBarry Smith 
2475d382aafbSBarry Smith struct _n_PetscSubcomm {
2476d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2477d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2478d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2479d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2480d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2481d382aafbSBarry Smith };
2482d382aafbSBarry Smith 
2483638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2484638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2485638faf0bSHong Zhang 
24867087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2487fcfd50ebSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm*);
24887087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24897087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,const PetscSubcommType);
24907087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2491d382aafbSBarry Smith 
249282a7e548SBarry Smith #include <petscctable.h>
249382a7e548SBarry Smith 
2494d382aafbSBarry Smith PETSC_EXTERN_CXX_END
24956c7e564aSBarry Smith 
24969e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24979e03d832SJed Brown #undef __FUNCT__
24989e03d832SJed Brown #define __FUNCT__ "User provided function"
24999e03d832SJed Brown 
2500d382aafbSBarry Smith #endif
2501