1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 73ca90d2dSJacob Faibussowitsch 8d382aafbSBarry Smith /* ========================================================================== */ 9d382aafbSBarry Smith /* 10d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 111c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 121c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 131c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 141cc8b206SBarry Smith directory as the other PETSc include files. 15d382aafbSBarry Smith */ 162c8e378dSBarry Smith #include <petscconf.h> 171c77a0c5SBarry Smith #include <petscconf_poison.h> 182c8e378dSBarry Smith #include <petscfix.h> 19bde483f2SJacob Faibussowitsch #include <petscmacros.h> 2033bb201bSJacob Faibussowitsch 2133bb201bSJacob Faibussowitsch /* placeholder defines */ 2233bb201bSJacob Faibussowitsch #if PetscHasAttribute(format) 2333bb201bSJacob Faibussowitsch # define PETSC_ATTRIBUTE_FORMAT(strIdx,vaArgIdx) 2433bb201bSJacob Faibussowitsch #else 2533bb201bSJacob Faibussowitsch # define PETSC_ATTRIBUTE_FORMAT(strIdx,vaArgIdx) 2633bb201bSJacob Faibussowitsch #endif 2733bb201bSJacob Faibussowitsch 2873fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2973fca5a0SBarry Smith /* 3073fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 3173fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 3273fca5a0SBarry Smith */ 33216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 3473fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 3573fca5a0SBarry Smith # endif 36216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3773fca5a0SBarry Smith # define _BSD_SOURCE 3873fca5a0SBarry Smith # endif 3907f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 4007f00807SSatish Balay # define _DEFAULT_SOURCE 4107f00807SSatish Balay # endif 42ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 43ea0fecefSShri Abhyankar # define _GNU_SOURCE 44ea0fecefSShri Abhyankar # endif 4573fca5a0SBarry Smith #endif 4673fca5a0SBarry Smith 47df4397b0SStefano Zampini #include <petscsystypes.h> 48df4397b0SStefano Zampini 49d382aafbSBarry Smith /* ========================================================================== */ 50d382aafbSBarry Smith 51d382aafbSBarry Smith /* 52d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 53d382aafbSBarry Smith 54d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 55d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 56d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 57d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 58d382aafbSBarry Smith mpicxx.h directly in their code 59d382aafbSBarry Smith */ 60fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 61d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 62fa9e63e2SJed Brown #endif 63fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 64d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 65fa9e63e2SJed Brown #endif 66e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 67e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 68e771154cSJed Brown #else 692c8e378dSBarry Smith # include <mpi.h> 70e771154cSJed Brown #endif 7165013866SBarry Smith 72d382aafbSBarry Smith /* 73a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 74a7886beaSBarry Smith This usually happens because 75a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 76a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 77a7886beaSBarry Smith */ 78a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 79c9b973beSBarry Smith # if !defined(MPIUNI_H) 80a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 81a7886beaSBarry Smith # endif 8241f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 8341f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 8441f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 8541f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 8641f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 8741f4af4cSSatish Balay # endif 8841f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 8941f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 9041f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 9141f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 9241f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 9341f4af4cSSatish Balay # endif 94a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 9541f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 96a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 97ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 98a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 99a7886beaSBarry Smith # endif 100a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 101a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 102a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 103ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 104c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 105a7886beaSBarry Smith # endif 106c93fae50SJacob Faibussowitsch # define PETSC_MPI_COMM_FMT "p" 107c93fae50SJacob Faibussowitsch # define PETSC_MPI_WIN_FMT "p" 108d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 109d97fd468SStefano Zampini # if !defined(MSMPI_VER) 110d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 111d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 112d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 113d97fd468SStefano Zampini # endif 114d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 115d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 116a7886beaSBarry Smith #endif 117a7886beaSBarry Smith 118c93fae50SJacob Faibussowitsch /* Format specifier for printing MPI_Comm (most implementations use 'int' as type) */ 119c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_COMM_FMT) 120c93fae50SJacob Faibussowitsch # define PETSC_MPI_COMM_FMT "d" 121c93fae50SJacob Faibussowitsch #endif 122c93fae50SJacob Faibussowitsch 123c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_WIN_FMT) 124c93fae50SJacob Faibussowitsch # define PETSC_MPI_WIN_FMT "d" 125c93fae50SJacob Faibussowitsch #endif 126c93fae50SJacob Faibussowitsch 127a7886beaSBarry Smith /* 1282981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 129d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 130d382aafbSBarry Smith */ 131d382aafbSBarry Smith #include <stdio.h> 132d382aafbSBarry Smith 133d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 134d382aafbSBarry Smith #if !defined(MPIAPI) 135d382aafbSBarry Smith #define MPIAPI 136d382aafbSBarry Smith #endif 137d382aafbSBarry Smith 1381cc8b206SBarry Smith /* 1391cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1401cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1411cc8b206SBarry Smith does not match the actual type of the argument being passed in 1421cc8b206SBarry Smith */ 143c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 144894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 145894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1468ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1478ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 148894dd566SJed Brown # endif 149894dd566SJed Brown #endif 150894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 151894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 1528ad47952SJed Brown # define PetscAttrMPITypeTag(type) 1538ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 154894dd566SJed Brown #endif 155b3506946SBarry Smith 1565a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 157df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 158e28ce29aSPatrick Sanan 159e28ce29aSPatrick Sanan /*MC 160e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 161e28ce29aSPatrick Sanan 162e28ce29aSPatrick Sanan Notes: 163e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 164e28ce29aSPatrick Sanan 165e28ce29aSPatrick Sanan Level: beginner 166e28ce29aSPatrick Sanan 167e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 168e28ce29aSPatrick Sanan M*/ 169e28ce29aSPatrick Sanan 1707cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 171b7b8f77aSBarry Smith 172d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 173bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 174a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 175d382aafbSBarry Smith #else 176d382aafbSBarry Smith # define MPIU_INT MPI_INT 177a05e1a72SSatish Balay # define PetscInt_FMT "d" 178d382aafbSBarry Smith #endif 179d382aafbSBarry Smith 180503cfb0cSBarry Smith /* 181503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 182503cfb0cSBarry Smith */ 183e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 184d382aafbSBarry Smith 185d382aafbSBarry Smith /* 186d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 187d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 188d382aafbSBarry Smith */ 189014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 190d382aafbSBarry Smith 191d382aafbSBarry Smith /* 192d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 193d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 194d382aafbSBarry Smith */ 195014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 196d382aafbSBarry Smith 197c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 198c8b9133aSSatish Balay 1995c993f7fSStefano Zampini #if defined(__NEC__) 2005c993f7fSStefano Zampini # define PetscPragmaSIMD _Pragma("_NEC ivdep") 2015c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 202c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 2031dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 204c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 205e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 206e5518150SSatish Balay # if defined(_MSC_VER) 207160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 208e5518150SSatish Balay # else 209e5518150SSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 210e5518150SSatish Balay # endif 211c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 212c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 213c8b9133aSSatish Balay #else 214c8b9133aSSatish Balay # define PetscPragmaSIMD 215c8b9133aSSatish Balay #endif 216c8b9133aSSatish Balay 217d382aafbSBarry Smith /* 218d382aafbSBarry Smith Declare extern C stuff after including external header files 219d382aafbSBarry Smith */ 220d382aafbSBarry Smith 2216a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 22270b3c8c7SBarry Smith 2236edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 2248b49ba18SBarry Smith /* 225390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 2268b49ba18SBarry Smith */ 2278b49ba18SBarry Smith #include <petscmath.h> 2288b49ba18SBarry Smith 2296a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 230d382aafbSBarry Smith 231d382aafbSBarry Smith /*MC 2320298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 233d382aafbSBarry Smith 234d382aafbSBarry Smith Level: beginner 235d382aafbSBarry Smith 236e28ce29aSPatrick Sanan Note: 237e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 238d382aafbSBarry Smith some default 239d382aafbSBarry Smith 240e28ce29aSPatrick Sanan Fortran Notes: 241e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 242d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 243d382aafbSBarry Smith 244e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 245d382aafbSBarry Smith 246d382aafbSBarry Smith M*/ 2470298fd71SBarry Smith #define PETSC_IGNORE NULL 248d382aafbSBarry Smith 249c528d872SBarry Smith /* This is deprecated */ 250c528d872SBarry Smith #define PETSC_NULL NULL 251c528d872SBarry Smith 252d382aafbSBarry Smith /*MC 253557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 254557d4da8SBarry Smith where you wish PETSc to use the default. 255557d4da8SBarry Smith 256557d4da8SBarry Smith Level: beginner 257557d4da8SBarry Smith 258e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 259557d4da8SBarry Smith 260557d4da8SBarry Smith M*/ 261557d4da8SBarry Smith #define PETSC_DECIDE -1 262557d4da8SBarry Smith 263557d4da8SBarry Smith /*MC 264d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 265d382aafbSBarry Smith where you wish PETSc to compute the required value. 266d382aafbSBarry Smith 267d382aafbSBarry Smith Level: beginner 268d382aafbSBarry Smith 269e28ce29aSPatrick Sanan Developer Note: 270e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 271557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 272557d4da8SBarry Smith 2730298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 274d382aafbSBarry Smith 275d382aafbSBarry Smith M*/ 276d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 277d382aafbSBarry Smith 278d382aafbSBarry Smith /*MC 279557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 280557d4da8SBarry Smith where you wish PETSc to use the default. 281557d4da8SBarry Smith 282557d4da8SBarry Smith Level: beginner 283557d4da8SBarry Smith 284e28ce29aSPatrick Sanan Fortran Notes: 285e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 286557d4da8SBarry Smith 2870298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 288557d4da8SBarry Smith 289557d4da8SBarry Smith M*/ 290557d4da8SBarry Smith #define PETSC_DEFAULT -2 291557d4da8SBarry Smith 292557d4da8SBarry Smith /*MC 293d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 294ea8fe74dSBarry Smith all the processes that PETSc knows about. 295d382aafbSBarry Smith 296d382aafbSBarry Smith Level: beginner 297d382aafbSBarry Smith 298e28ce29aSPatrick Sanan Notes: 299e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 300d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 301d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 302a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 303a990b902SBarry Smith 304a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 305a990b902SBarry Smith is called because it may not have a valid value yet. 306d382aafbSBarry Smith 307d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 308d382aafbSBarry Smith 309d382aafbSBarry Smith M*/ 310014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 311d382aafbSBarry Smith 312d382aafbSBarry Smith /*MC 313503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 314d382aafbSBarry Smith 315d382aafbSBarry Smith Level: beginner 316d382aafbSBarry Smith 317e28ce29aSPatrick Sanan Notes: 318e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 319a990b902SBarry Smith 320d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 321d382aafbSBarry Smith 322d382aafbSBarry Smith M*/ 323d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 324d382aafbSBarry Smith 3256de5d289SStefano Zampini /*MC 3266de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 3276de5d289SStefano Zampini MPI with MPI_Init_thread. 3286de5d289SStefano Zampini 3296de5d289SStefano Zampini Level: beginner 3306de5d289SStefano Zampini 3316de5d289SStefano Zampini Notes: 3326de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 3336de5d289SStefano Zampini 3346de5d289SStefano Zampini .seealso: PetscInitialize() 3356de5d289SStefano Zampini 3366de5d289SStefano Zampini M*/ 3376de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 3386de5d289SStefano Zampini 339d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 3408ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 341014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 342014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 3434cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 344d382aafbSBarry Smith 345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 34857f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm,MPI_Comm*); 34957f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm,MPI_Comm*); 350d382aafbSBarry Smith 35159e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 35259e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 35359e55d94SJunchao Zhang #endif 35459e55d94SJunchao Zhang 35571438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 35671438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 35771438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 35871438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 35971438e86SJunchao Zhang #endif 36071438e86SJunchao Zhang 361540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 362540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 363540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 364540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 365540e20f2SPierre Jolivet #endif 366540e20f2SPierre Jolivet 367d382aafbSBarry Smith /*MC 36895dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 369d382aafbSBarry Smith 370eca87e8dSBarry Smith Synopsis: 371aaa7dc30SBarry Smith #include <petscsys.h> 372eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 373eca87e8dSBarry Smith 374eca87e8dSBarry Smith Not Collective 375eca87e8dSBarry Smith 376d382aafbSBarry Smith Input Parameter: 377d382aafbSBarry Smith . m - number of bytes to allocate 378d382aafbSBarry Smith 379d382aafbSBarry Smith Output Parameter: 380d382aafbSBarry Smith . result - memory allocated 381d382aafbSBarry Smith 382d382aafbSBarry Smith Level: beginner 383d382aafbSBarry Smith 38449d7da52SJed Brown Notes: 38549d7da52SJed Brown Memory is always allocated at least double aligned 386d382aafbSBarry Smith 38749d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 388d382aafbSBarry Smith 389d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 390d382aafbSBarry Smith 391d382aafbSBarry Smith M*/ 392071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 393d382aafbSBarry Smith 394d382aafbSBarry Smith /*MC 3953221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 3963221ece2SMatthew G. Knepley 3973221ece2SMatthew G. Knepley Synopsis: 3983221ece2SMatthew G. Knepley #include <petscsys.h> 3993221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 4003221ece2SMatthew G. Knepley 4013221ece2SMatthew G. Knepley Not Collective 4023221ece2SMatthew G. Knepley 4033221ece2SMatthew G. Knepley Input Parameters: 4043221ece2SMatthew G. Knepley + m - number of bytes to allocate 40592f119d6SBarry Smith - result - previous memory 4063221ece2SMatthew G. Knepley 4073221ece2SMatthew G. Knepley Output Parameter: 4083221ece2SMatthew G. Knepley . result - new memory allocated 4093221ece2SMatthew G. Knepley 4103221ece2SMatthew G. Knepley Level: developer 4113221ece2SMatthew G. Knepley 4123221ece2SMatthew G. Knepley Notes: 4133221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 4143221ece2SMatthew G. Knepley 4153221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 4163221ece2SMatthew G. Knepley 4173221ece2SMatthew G. Knepley M*/ 4183221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 4193221ece2SMatthew G. Knepley 4203221ece2SMatthew G. Knepley /*MC 421503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 422d382aafbSBarry Smith 423d382aafbSBarry Smith Synopsis: 424aaa7dc30SBarry Smith #include <petscsys.h> 425d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 426d382aafbSBarry Smith 427eca87e8dSBarry Smith Not Collective 428eca87e8dSBarry Smith 429eca87e8dSBarry Smith Input Parameters: 430eca87e8dSBarry Smith . addr - address to align (any pointer type) 431eca87e8dSBarry Smith 432d382aafbSBarry Smith Level: developer 433d382aafbSBarry Smith 434d382aafbSBarry Smith .seealso: PetscMallocAlign() 435d382aafbSBarry Smith 436d382aafbSBarry Smith M*/ 437d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 438d382aafbSBarry Smith 439d382aafbSBarry Smith /*MC 4408f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 4418f51dc47SJunchao Zhang 4428f51dc47SJunchao Zhang Synopsis: 4438f51dc47SJunchao Zhang #include <petscsys.h> 4448f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 4458f51dc47SJunchao Zhang 4468f51dc47SJunchao Zhang Not Collective 4478f51dc47SJunchao Zhang 4488f51dc47SJunchao Zhang Input Parameter: 4498f51dc47SJunchao Zhang . m - number of bytes to allocate 4508f51dc47SJunchao Zhang 4518f51dc47SJunchao Zhang Output Parameter: 4528f51dc47SJunchao Zhang . result - memory allocated 4538f51dc47SJunchao Zhang 4548f51dc47SJunchao Zhang Level: beginner 4558f51dc47SJunchao Zhang 4568f51dc47SJunchao Zhang Notes: 4578f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 4588f51dc47SJunchao Zhang 4598f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 4608f51dc47SJunchao Zhang 4618f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 4628f51dc47SJunchao Zhang 4638f51dc47SJunchao Zhang M*/ 46466122d6dSBarry Smith #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m),(result)) 4658f51dc47SJunchao Zhang 4668f51dc47SJunchao Zhang /*MC 467785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 468d382aafbSBarry Smith 469eca87e8dSBarry Smith Synopsis: 470aaa7dc30SBarry Smith #include <petscsys.h> 471785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 472785e854fSJed Brown 473785e854fSJed Brown Not Collective 474785e854fSJed Brown 475785e854fSJed Brown Input Parameter: 476390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 477785e854fSJed Brown 478785e854fSJed Brown Output Parameter: 4791fe1b817SJunchao Zhang . r1 - memory allocated 480785e854fSJed Brown 481e28ce29aSPatrick Sanan Note: 482e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 483390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 484390e1bf2SBarry Smith $ PetscInt *id; 485390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 486390e1bf2SBarry Smith not 487390e1bf2SBarry Smith $ PetscInt *id; 488390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 489390e1bf2SBarry Smith 4901fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 491390e1bf2SBarry Smith 492390e1bf2SBarry Smith Level: beginner 493785e854fSJed Brown 4941795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 495785e854fSJed Brown 496785e854fSJed Brown M*/ 49766122d6dSBarry Smith #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1)) 498785e854fSJed Brown 499785e854fSJed Brown /*MC 5001795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 5011795a4d1SJed Brown 5021795a4d1SJed Brown Synopsis: 503aaa7dc30SBarry Smith #include <petscsys.h> 5041795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 5051795a4d1SJed Brown 5061795a4d1SJed Brown Not Collective 5071795a4d1SJed Brown 5081795a4d1SJed Brown Input Parameter: 5091795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5101795a4d1SJed Brown 5111795a4d1SJed Brown Output Parameter: 5121fe1b817SJunchao Zhang . r1 - memory allocated 5131795a4d1SJed Brown 514e28ce29aSPatrick Sanan Notes: 515e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 516390e1bf2SBarry Smith 517390e1bf2SBarry Smith Level: beginner 5181795a4d1SJed Brown 5191795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 5201795a4d1SJed Brown 5211795a4d1SJed Brown M*/ 52266122d6dSBarry Smith #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1)) 5231795a4d1SJed Brown 5241795a4d1SJed Brown /*MC 525dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 526d382aafbSBarry Smith 527eca87e8dSBarry Smith Synopsis: 528aaa7dc30SBarry Smith #include <petscsys.h> 529dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 530eca87e8dSBarry Smith 531eca87e8dSBarry Smith Not Collective 532eca87e8dSBarry Smith 533d8d19677SJose E. Roman Input Parameters: 534d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 535dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 536d382aafbSBarry Smith 537d8d19677SJose E. Roman Output Parameters: 538d382aafbSBarry Smith + r1 - memory allocated in first chunk 539d382aafbSBarry Smith - r2 - memory allocated in second chunk 540d382aafbSBarry Smith 541d382aafbSBarry Smith Level: developer 542d382aafbSBarry Smith 5431795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 544d382aafbSBarry Smith 545d382aafbSBarry Smith M*/ 54666122d6dSBarry Smith #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2)) 547d382aafbSBarry Smith 548d382aafbSBarry Smith /*MC 5491795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 550d382aafbSBarry Smith 551eca87e8dSBarry Smith Synopsis: 552aaa7dc30SBarry Smith #include <petscsys.h> 5531795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 554eca87e8dSBarry Smith 555eca87e8dSBarry Smith Not Collective 556eca87e8dSBarry Smith 557d8d19677SJose E. Roman Input Parameters: 558d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5591795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5601795a4d1SJed Brown 561d8d19677SJose E. Roman Output Parameters: 5621795a4d1SJed Brown + r1 - memory allocated in first chunk 5631795a4d1SJed Brown - r2 - memory allocated in second chunk 5641795a4d1SJed Brown 5651795a4d1SJed Brown Level: developer 5661795a4d1SJed Brown 5671795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 5681795a4d1SJed Brown 5691795a4d1SJed Brown M*/ 57066122d6dSBarry Smith #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2)) 5711795a4d1SJed Brown 5721795a4d1SJed Brown /*MC 573dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 574d382aafbSBarry Smith 575d382aafbSBarry Smith Synopsis: 576aaa7dc30SBarry Smith #include <petscsys.h> 577dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 578d382aafbSBarry Smith 579d382aafbSBarry Smith Not Collective 580d382aafbSBarry Smith 581d8d19677SJose E. Roman Input Parameters: 582d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 583d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 584dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 585d382aafbSBarry Smith 586d8d19677SJose E. Roman Output Parameters: 587d382aafbSBarry Smith + r1 - memory allocated in first chunk 588d382aafbSBarry Smith . r2 - memory allocated in second chunk 589d382aafbSBarry Smith - r3 - memory allocated in third chunk 590d382aafbSBarry Smith 591d382aafbSBarry Smith Level: developer 592d382aafbSBarry Smith 5931795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 594d382aafbSBarry Smith 595d382aafbSBarry Smith M*/ 59666122d6dSBarry Smith #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3)) 597d382aafbSBarry Smith 598d382aafbSBarry Smith /*MC 5991795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 600d382aafbSBarry Smith 601eca87e8dSBarry Smith Synopsis: 602aaa7dc30SBarry Smith #include <petscsys.h> 6031795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 604eca87e8dSBarry Smith 605eca87e8dSBarry Smith Not Collective 606eca87e8dSBarry Smith 607d8d19677SJose E. Roman Input Parameters: 608d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 609d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 6101795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 6111795a4d1SJed Brown 612d8d19677SJose E. Roman Output Parameters: 6131795a4d1SJed Brown + r1 - memory allocated in first chunk 6141795a4d1SJed Brown . r2 - memory allocated in second chunk 6151795a4d1SJed Brown - r3 - memory allocated in third chunk 6161795a4d1SJed Brown 6171795a4d1SJed Brown Level: developer 6181795a4d1SJed Brown 6191795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 6201795a4d1SJed Brown 6211795a4d1SJed Brown M*/ 62266122d6dSBarry Smith #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3)) 6231795a4d1SJed Brown 6241795a4d1SJed Brown /*MC 625dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 626d382aafbSBarry Smith 627d382aafbSBarry Smith Synopsis: 628aaa7dc30SBarry Smith #include <petscsys.h> 629dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 630d382aafbSBarry Smith 631d382aafbSBarry Smith Not Collective 632d382aafbSBarry Smith 633d8d19677SJose E. Roman Input Parameters: 634d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 635d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 636d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 637dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 638d382aafbSBarry Smith 639d8d19677SJose E. Roman Output Parameters: 640d382aafbSBarry Smith + r1 - memory allocated in first chunk 641d382aafbSBarry Smith . r2 - memory allocated in second chunk 642d382aafbSBarry Smith . r3 - memory allocated in third chunk 643d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 644d382aafbSBarry Smith 645d382aafbSBarry Smith Level: developer 646d382aafbSBarry Smith 6471795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 648d382aafbSBarry Smith 649d382aafbSBarry Smith M*/ 65066122d6dSBarry Smith #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4)) 651d382aafbSBarry Smith 652d382aafbSBarry Smith /*MC 6531795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 654d382aafbSBarry Smith 655eca87e8dSBarry Smith Synopsis: 656aaa7dc30SBarry Smith #include <petscsys.h> 6571795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 658eca87e8dSBarry Smith 659eca87e8dSBarry Smith Not Collective 660eca87e8dSBarry Smith 661e28ce29aSPatrick Sanan Input Parameters: 662d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 663d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 664d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6651795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6661795a4d1SJed Brown 667e28ce29aSPatrick Sanan Output Parameters: 6681795a4d1SJed Brown + r1 - memory allocated in first chunk 6691795a4d1SJed Brown . r2 - memory allocated in second chunk 6701795a4d1SJed Brown . r3 - memory allocated in third chunk 6711795a4d1SJed Brown - r4 - memory allocated in fourth chunk 6721795a4d1SJed Brown 6731795a4d1SJed Brown Level: developer 6741795a4d1SJed Brown 6751795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 6761795a4d1SJed Brown 6771795a4d1SJed Brown M*/ 67866122d6dSBarry Smith #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4)) 6791795a4d1SJed Brown 6801795a4d1SJed Brown /*MC 681dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 682d382aafbSBarry Smith 683d382aafbSBarry Smith Synopsis: 684aaa7dc30SBarry Smith #include <petscsys.h> 685dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 686d382aafbSBarry Smith 687d382aafbSBarry Smith Not Collective 688d382aafbSBarry Smith 689e28ce29aSPatrick Sanan Input Parameters: 690d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 691d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 692d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 693d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 694dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 695d382aafbSBarry Smith 696e28ce29aSPatrick Sanan Output Parameters: 697d382aafbSBarry Smith + r1 - memory allocated in first chunk 698d382aafbSBarry Smith . r2 - memory allocated in second chunk 699d382aafbSBarry Smith . r3 - memory allocated in third chunk 700d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 701d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 702d382aafbSBarry Smith 703d382aafbSBarry Smith Level: developer 704d382aafbSBarry Smith 7051795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 706d382aafbSBarry Smith 707d382aafbSBarry Smith M*/ 70866122d6dSBarry Smith #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5)) 709d382aafbSBarry Smith 710d382aafbSBarry Smith /*MC 7111795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 712d382aafbSBarry Smith 713eca87e8dSBarry Smith Synopsis: 714aaa7dc30SBarry Smith #include <petscsys.h> 7151795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 716eca87e8dSBarry Smith 717eca87e8dSBarry Smith Not Collective 718eca87e8dSBarry Smith 719e28ce29aSPatrick Sanan Input Parameters: 720d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 721d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 722d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 723d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7241795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7251795a4d1SJed Brown 726e28ce29aSPatrick Sanan Output Parameters: 7271795a4d1SJed Brown + r1 - memory allocated in first chunk 7281795a4d1SJed Brown . r2 - memory allocated in second chunk 7291795a4d1SJed Brown . r3 - memory allocated in third chunk 7301795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7311795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7321795a4d1SJed Brown 7331795a4d1SJed Brown Level: developer 7341795a4d1SJed Brown 7351795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 7361795a4d1SJed Brown 7371795a4d1SJed Brown M*/ 73866122d6dSBarry Smith #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5)) 739d382aafbSBarry Smith 740d382aafbSBarry Smith /*MC 741dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 742d382aafbSBarry Smith 743d382aafbSBarry Smith Synopsis: 744aaa7dc30SBarry Smith #include <petscsys.h> 745dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 746d382aafbSBarry Smith 747d382aafbSBarry Smith Not Collective 748d382aafbSBarry Smith 749e28ce29aSPatrick Sanan Input Parameters: 750d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 751d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 752d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 753d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 754d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 755dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 756d382aafbSBarry Smith 757e28ce29aSPatrick Sanan Output Parameteasr: 758d382aafbSBarry Smith + r1 - memory allocated in first chunk 759d382aafbSBarry Smith . r2 - memory allocated in second chunk 760d382aafbSBarry Smith . r3 - memory allocated in third chunk 761d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 762d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 763d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 764d382aafbSBarry Smith 765d382aafbSBarry Smith Level: developer 766d382aafbSBarry Smith 7671795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 768d382aafbSBarry Smith 769d382aafbSBarry Smith M*/ 77066122d6dSBarry Smith #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6)) 771d382aafbSBarry Smith 772d382aafbSBarry Smith /*MC 7731795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 774d382aafbSBarry Smith 775eca87e8dSBarry Smith Synopsis: 776aaa7dc30SBarry Smith #include <petscsys.h> 7771795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 778eca87e8dSBarry Smith 779eca87e8dSBarry Smith Not Collective 780eca87e8dSBarry Smith 781e28ce29aSPatrick Sanan Input Parameters: 782d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 783d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 784d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 785d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 786d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 7871795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 7881795a4d1SJed Brown 789e28ce29aSPatrick Sanan Output Parameters: 7901795a4d1SJed Brown + r1 - memory allocated in first chunk 7911795a4d1SJed Brown . r2 - memory allocated in second chunk 7921795a4d1SJed Brown . r3 - memory allocated in third chunk 7931795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7941795a4d1SJed Brown . r5 - memory allocated in fifth chunk 7951795a4d1SJed Brown - r6 - memory allocated in sixth chunk 7961795a4d1SJed Brown 7971795a4d1SJed Brown Level: developer 7981795a4d1SJed Brown 7991795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 8001795a4d1SJed Brown 8011795a4d1SJed Brown M*/ 80266122d6dSBarry Smith #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6)) 8031795a4d1SJed Brown 8041795a4d1SJed Brown /*MC 805dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 806d382aafbSBarry Smith 807d382aafbSBarry Smith Synopsis: 808aaa7dc30SBarry Smith #include <petscsys.h> 809dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 810d382aafbSBarry Smith 811d382aafbSBarry Smith Not Collective 812d382aafbSBarry Smith 813e28ce29aSPatrick Sanan Input Parameters: 814d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 815d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 816d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 817d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 818d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 819d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 820dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 821d382aafbSBarry Smith 822e28ce29aSPatrick Sanan Output Parameters: 823d382aafbSBarry Smith + r1 - memory allocated in first chunk 824d382aafbSBarry Smith . r2 - memory allocated in second chunk 825d382aafbSBarry Smith . r3 - memory allocated in third chunk 826d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 827d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 828d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 829eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 830d382aafbSBarry Smith 831d382aafbSBarry Smith Level: developer 832d382aafbSBarry Smith 8331795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 834d382aafbSBarry Smith 835d382aafbSBarry Smith M*/ 83666122d6dSBarry Smith #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6),(size_t)((size_t)m7)*sizeof(**(r7)),(r7)) 837d382aafbSBarry Smith 838d382aafbSBarry Smith /*MC 8391795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 8401795a4d1SJed Brown 8411795a4d1SJed Brown Synopsis: 842aaa7dc30SBarry Smith #include <petscsys.h> 8431795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8441795a4d1SJed Brown 8451795a4d1SJed Brown Not Collective 8461795a4d1SJed Brown 847e28ce29aSPatrick Sanan Input Parameters: 8481795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8491795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8501795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8511795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8521795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8531795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8541795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8551795a4d1SJed Brown 856e28ce29aSPatrick Sanan Output Parameters: 8571795a4d1SJed Brown + r1 - memory allocated in first chunk 8581795a4d1SJed Brown . r2 - memory allocated in second chunk 8591795a4d1SJed Brown . r3 - memory allocated in third chunk 8601795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8611795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8621795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8631795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8641795a4d1SJed Brown 8651795a4d1SJed Brown Level: developer 8661795a4d1SJed Brown 8671795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 8681795a4d1SJed Brown 8691795a4d1SJed Brown M*/ 87066122d6dSBarry Smith #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6),(size_t)((size_t)m7)*sizeof(**(r7)),(r7)) 8711795a4d1SJed Brown 8721795a4d1SJed Brown /*MC 873503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 874d382aafbSBarry Smith 875eca87e8dSBarry Smith Synopsis: 876aaa7dc30SBarry Smith #include <petscsys.h> 877b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 878eca87e8dSBarry Smith 879eca87e8dSBarry Smith Not Collective 880eca87e8dSBarry Smith 881d382aafbSBarry Smith Output Parameter: 882b00a9115SJed Brown . result - memory allocated, sized to match pointer type 883d382aafbSBarry Smith 884d382aafbSBarry Smith Level: beginner 885d382aafbSBarry Smith 886390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 887d382aafbSBarry Smith 888d382aafbSBarry Smith M*/ 889b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 890ad0619ddSBarry Smith 891ad0619ddSBarry Smith /*MC 892b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 893ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 894ad0619ddSBarry Smith 895ad0619ddSBarry Smith Synopsis: 896aaa7dc30SBarry Smith #include <petscsys.h> 897b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 898ad0619ddSBarry Smith 899ad0619ddSBarry Smith Not Collective 900ad0619ddSBarry Smith 901ad0619ddSBarry Smith Input Parameter: 902b00a9115SJed Brown . obj - object memory is logged to 903ad0619ddSBarry Smith 904ad0619ddSBarry Smith Output Parameter: 905b00a9115SJed Brown . result - memory allocated, sized to match pointer type 906ad0619ddSBarry Smith 907ad0619ddSBarry Smith Level: developer 908ad0619ddSBarry Smith 909390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 910ad0619ddSBarry Smith 911ad0619ddSBarry Smith M*/ 912d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 913d382aafbSBarry Smith 914d382aafbSBarry Smith /*MC 915d382aafbSBarry Smith PetscFree - Frees memory 916d382aafbSBarry Smith 917eca87e8dSBarry Smith Synopsis: 918aaa7dc30SBarry Smith #include <petscsys.h> 919eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 920eca87e8dSBarry Smith 921eca87e8dSBarry Smith Not Collective 922eca87e8dSBarry Smith 923d382aafbSBarry Smith Input Parameter: 9247f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 925d382aafbSBarry Smith 926d382aafbSBarry Smith Level: beginner 927d382aafbSBarry Smith 92849d7da52SJed Brown Notes: 929390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 930390e1bf2SBarry Smith 93149d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 932d382aafbSBarry Smith 933390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 934d382aafbSBarry Smith 935d382aafbSBarry Smith M*/ 936ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 937d382aafbSBarry Smith 938d382aafbSBarry Smith /*MC 939d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 940d382aafbSBarry Smith 941eca87e8dSBarry Smith Synopsis: 942aaa7dc30SBarry Smith #include <petscsys.h> 943eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 944eca87e8dSBarry Smith 945eca87e8dSBarry Smith Not Collective 946eca87e8dSBarry Smith 947e28ce29aSPatrick Sanan Input Parameters: 948d382aafbSBarry Smith + memory1 - memory to free 949d382aafbSBarry Smith - memory2 - 2nd memory to free 950d382aafbSBarry Smith 951d382aafbSBarry Smith Level: developer 952d382aafbSBarry Smith 95395452b02SPatrick Sanan Notes: 95495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 955d382aafbSBarry Smith 956d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 957d382aafbSBarry Smith 958d382aafbSBarry Smith M*/ 959ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 960d382aafbSBarry Smith 961d382aafbSBarry Smith /*MC 962d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 963d382aafbSBarry Smith 964eca87e8dSBarry Smith Synopsis: 965aaa7dc30SBarry Smith #include <petscsys.h> 966eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 967eca87e8dSBarry Smith 968eca87e8dSBarry Smith Not Collective 969eca87e8dSBarry Smith 970e28ce29aSPatrick Sanan Input Parameters: 971d382aafbSBarry Smith + memory1 - memory to free 972d382aafbSBarry Smith . memory2 - 2nd memory to free 973d382aafbSBarry Smith - memory3 - 3rd memory to free 974d382aafbSBarry Smith 975d382aafbSBarry Smith Level: developer 976d382aafbSBarry Smith 97795452b02SPatrick Sanan Notes: 97895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 979d382aafbSBarry Smith 980d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 981d382aafbSBarry Smith 982d382aafbSBarry Smith M*/ 983ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 984d382aafbSBarry Smith 985d382aafbSBarry Smith /*MC 986d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 987d382aafbSBarry Smith 988eca87e8dSBarry Smith Synopsis: 989aaa7dc30SBarry Smith #include <petscsys.h> 990eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 991eca87e8dSBarry Smith 992eca87e8dSBarry Smith Not Collective 993eca87e8dSBarry Smith 994e28ce29aSPatrick Sanan Input Parameters: 995d382aafbSBarry Smith + m1 - memory to free 996d382aafbSBarry Smith . m2 - 2nd memory to free 997d382aafbSBarry Smith . m3 - 3rd memory to free 998d382aafbSBarry Smith - m4 - 4th memory to free 999d382aafbSBarry Smith 1000d382aafbSBarry Smith Level: developer 1001d382aafbSBarry Smith 100295452b02SPatrick Sanan Notes: 100395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1004d382aafbSBarry Smith 1005d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1006d382aafbSBarry Smith 1007d382aafbSBarry Smith M*/ 1008ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1009d382aafbSBarry Smith 1010d382aafbSBarry Smith /*MC 1011d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1012d382aafbSBarry Smith 1013eca87e8dSBarry Smith Synopsis: 1014aaa7dc30SBarry Smith #include <petscsys.h> 1015eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1016eca87e8dSBarry Smith 1017eca87e8dSBarry Smith Not Collective 1018eca87e8dSBarry Smith 1019e28ce29aSPatrick Sanan Input Parameters: 1020d382aafbSBarry Smith + m1 - memory to free 1021d382aafbSBarry Smith . m2 - 2nd memory to free 1022d382aafbSBarry Smith . m3 - 3rd memory to free 1023d382aafbSBarry Smith . m4 - 4th memory to free 1024d382aafbSBarry Smith - m5 - 5th memory to free 1025d382aafbSBarry Smith 1026d382aafbSBarry Smith Level: developer 1027d382aafbSBarry Smith 102895452b02SPatrick Sanan Notes: 102995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1030d382aafbSBarry Smith 1031d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1032d382aafbSBarry Smith 1033d382aafbSBarry Smith M*/ 1034ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1035d382aafbSBarry Smith 1036d382aafbSBarry Smith /*MC 1037d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1038d382aafbSBarry Smith 1039eca87e8dSBarry Smith Synopsis: 1040aaa7dc30SBarry Smith #include <petscsys.h> 1041eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1042eca87e8dSBarry Smith 1043eca87e8dSBarry Smith Not Collective 1044eca87e8dSBarry Smith 1045e28ce29aSPatrick Sanan Input Parameters: 1046d382aafbSBarry Smith + m1 - memory to free 1047d382aafbSBarry Smith . m2 - 2nd memory to free 1048d382aafbSBarry Smith . m3 - 3rd memory to free 1049d382aafbSBarry Smith . m4 - 4th memory to free 1050d382aafbSBarry Smith . m5 - 5th memory to free 1051d382aafbSBarry Smith - m6 - 6th memory to free 1052d382aafbSBarry Smith 1053d382aafbSBarry Smith Level: developer 1054d382aafbSBarry Smith 105595452b02SPatrick Sanan Notes: 105695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1057d382aafbSBarry Smith 1058d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1059d382aafbSBarry Smith 1060d382aafbSBarry Smith M*/ 1061ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1062d382aafbSBarry Smith 1063d382aafbSBarry Smith /*MC 1064d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1065d382aafbSBarry Smith 1066eca87e8dSBarry Smith Synopsis: 1067aaa7dc30SBarry Smith #include <petscsys.h> 1068eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1069eca87e8dSBarry Smith 1070eca87e8dSBarry Smith Not Collective 1071eca87e8dSBarry Smith 1072e28ce29aSPatrick Sanan Input Parameters: 1073d382aafbSBarry Smith + m1 - memory to free 1074d382aafbSBarry Smith . m2 - 2nd memory to free 1075d382aafbSBarry Smith . m3 - 3rd memory to free 1076d382aafbSBarry Smith . m4 - 4th memory to free 1077d382aafbSBarry Smith . m5 - 5th memory to free 1078d382aafbSBarry Smith . m6 - 6th memory to free 1079d382aafbSBarry Smith - m7 - 7th memory to free 1080d382aafbSBarry Smith 1081d382aafbSBarry Smith Level: developer 1082d382aafbSBarry Smith 108395452b02SPatrick Sanan Notes: 108495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1085d382aafbSBarry Smith 1086d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1087d382aafbSBarry Smith PetscMalloc7() 1088d382aafbSBarry Smith 1089d382aafbSBarry Smith M*/ 1090ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1091d382aafbSBarry Smith 1092ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1093ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1094071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1095efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 10963221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1097ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 109892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1099014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1100d382aafbSBarry Smith 1101d382aafbSBarry Smith /* 1102c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1103c1706be6SHong Zhang */ 1104c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1105c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 110631f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 110731f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 110831f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 110931f06eaaSHong Zhang #endif 111059af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 111159af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 111259af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 111359af0bd3SScott Kruger #endif 111459af0bd3SScott Kruger 1115a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 111636763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1117a5057860SBarry Smith 1118a5057860SBarry Smith /* 111966d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1120d382aafbSBarry Smith */ 1121014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 112292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1123014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1124014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1125e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1126e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 112792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 112892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1129efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 113092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 113192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1132608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1133608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1134d382aafbSBarry Smith 11356a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 11398e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1140d382aafbSBarry Smith 1141d382aafbSBarry Smith /* 1142d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1143d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1144d382aafbSBarry Smith functionality and/or error checking. 1145d382aafbSBarry Smith */ 1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1148d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1156a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1157014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1158014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11602f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1164014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 11652c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1166014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1167014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 116847340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 11696fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 11706991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 11716991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1172014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1173d382aafbSBarry Smith 1174573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1175573b0fb4SBarry Smith 1176014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1179d382aafbSBarry Smith 1180e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1181a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1182a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1183a53986e1SJed Brown 1184d382aafbSBarry Smith /* 1185d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1186d382aafbSBarry Smith */ 1187367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1188570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1189de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1190014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1191014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1192d9822059SBarry Smith #else 1193de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1194d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1195d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1196d9822059SBarry Smith #endif 1197014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1198d382aafbSBarry Smith 1199014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1200014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1201eb3f98d2SBarry Smith 120295c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1203d6a4318aSJed Brown 1204639ff905SBarry Smith /* 1205639ff905SBarry Smith Defines PETSc error handling. 1206639ff905SBarry Smith */ 1207639ff905SBarry Smith #include <petscerror.h> 1208d382aafbSBarry Smith 12090700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1210014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1211014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1212014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 121381256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 121481256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 121581256985SMatthew G. Knepley 1216d382aafbSBarry Smith /* 1217d382aafbSBarry Smith Routines that get memory usage information from the OS 1218d382aafbSBarry Smith */ 1219014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1220014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1221014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1222b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1223d382aafbSBarry Smith 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1225d382aafbSBarry Smith 1226d382aafbSBarry Smith /* 1227d382aafbSBarry Smith Initialization of PETSc 1228d382aafbSBarry Smith */ 1229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1230014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1231014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1232014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1234014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1239d382aafbSBarry Smith 1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1241607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1242d382aafbSBarry Smith 1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1247d382aafbSBarry Smith 1248a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1249a50e088cSMatthew G. Knepley 1250d382aafbSBarry Smith /* 1251d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12522981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1253d382aafbSBarry Smith */ 1254638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1255638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1256638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1257d382aafbSBarry Smith 1258d382aafbSBarry Smith /* 1259d382aafbSBarry Smith Functions that can act on any PETSc object. 1260d382aafbSBarry Smith */ 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1279bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1280bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 12830eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 12840eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1286d382aafbSBarry Smith 1287665c2dedSJed Brown #include <petscviewertypes.h> 1288639ff905SBarry Smith #include <petscoptions.h> 1289639ff905SBarry Smith 1290608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1291608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1292608c71bfSMatthew G. Knepley 12930633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 12940633abcbSJed Brown 1295c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1296dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1297639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 12980005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 12990005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1307685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 13104099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1312b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1315d382aafbSBarry Smith 1316e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13177aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1318e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1319e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1320e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1321e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1322e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1323e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1324e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1325e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1326e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 132715681b3cSBarry Smith 1328ec7429eaSBarry Smith #else 13297aab2a10SBarry Smith #define PetscSAWsBlock() 0 1330e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1331e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1332e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1333e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1334e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1335e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1336e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1337e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1338e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 133915681b3cSBarry Smith 1340ec7429eaSBarry Smith #endif 1341b90c6cbeSBarry Smith 134282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 134382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 134482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1345258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1346258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1347258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1348258ec3d2SMatthew G. Knepley #endif 13497d5d4d99SBarry Smith 13505fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1351a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 13525fe58b6fSBarry Smith #endif 13537eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1354a64a8e02SBarry Smith 1355140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1356140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1357140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1358140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1359140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1360140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1361d382aafbSBarry Smith 1362d382aafbSBarry Smith /* 1363503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1364d382aafbSBarry Smith link libraries that will be loaded as needed. 1365d382aafbSBarry Smith */ 1366a240a19fSJed Brown 1367a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1368a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1369140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 13701c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 13711c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 137244ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1373140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1374140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1375140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1376d382aafbSBarry Smith 1377014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1385d382aafbSBarry Smith 1386d382aafbSBarry Smith /* 1387d382aafbSBarry Smith Useful utility routines 1388d382aafbSBarry Smith */ 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1391d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1396*58b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,const PetscInt[2],PetscInt[2]); 1397*58b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,const PetscReal[2],PetscReal[2]); 1398d382aafbSBarry Smith 139964ac3b0dSPatrick Sanan /*MC 1400ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1401503cfb0cSBarry Smith 1402e28ce29aSPatrick Sanan Notes: 1403e28ce29aSPatrick Sanan This is useful in cases like 1404503cfb0cSBarry Smith $ int *a; 1405ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 14061cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 140764ac3b0dSPatrick Sanan 140864ac3b0dSPatrick Sanan Level: beginner 140964ac3b0dSPatrick Sanan 141064ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 141164ac3b0dSPatrick Sanan M*/ 1412d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1413503cfb0cSBarry Smith 1414d382aafbSBarry Smith /*MC 1415d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1416d382aafbSBarry Smith 1417d382aafbSBarry Smith Synopsis: 1418aaa7dc30SBarry Smith #include <petscsys.h> 1419659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1420d382aafbSBarry Smith 1421659f7ba0SBarry Smith Collective on comm 1422eca87e8dSBarry Smith 1423d382aafbSBarry Smith Input Parameters: 1424659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1425d382aafbSBarry Smith . format - the usual printf() format string 1426659f7ba0SBarry Smith - args - arguments to be printed 1427d382aafbSBarry Smith 1428d382aafbSBarry Smith Level: developer 1429d382aafbSBarry Smith 1430d382aafbSBarry Smith Fortran Note: 1431d382aafbSBarry Smith This routine is not supported in Fortran. 1432d382aafbSBarry Smith 1433659f7ba0SBarry Smith Note: 1434659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1435659f7ba0SBarry Smith 1436659f7ba0SBarry Smith To use, write your own function, for example, 1437659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1438659f7ba0SBarry Smith ${ 1439659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1440659f7ba0SBarry Smith $} 1441659f7ba0SBarry Smith then do the assigment 1442659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1443659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1444659f7ba0SBarry Smith 1445659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1446d382aafbSBarry Smith 1447d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1448d382aafbSBarry Smith M*/ 14493ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3); 1450d382aafbSBarry Smith 1451fcfd50ebSBarry Smith /* 1452fcfd50ebSBarry Smith Defines PETSc profiling. 1453fcfd50ebSBarry Smith */ 14542c8e378dSBarry Smith #include <petsclog.h> 1455fcfd50ebSBarry Smith 1456fcfd50ebSBarry Smith /* 1457fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1458fcfd50ebSBarry Smith */ 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 14623ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_ATTRIBUTE_FORMAT(3,4); 14633ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3); 14643ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...) PETSC_ATTRIBUTE_FORMAT(3,4); 14653ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...) PETSC_ATTRIBUTE_FORMAT(3,5); 14661b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1467fcfd50ebSBarry Smith 14683ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...) PETSC_ATTRIBUTE_FORMAT(1,2); 14693ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...) PETSC_ATTRIBUTE_FORMAT(1,2); 14703ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...) PETSC_ATTRIBUTE_FORMAT(2,3); 1471d382aafbSBarry Smith 1472d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1473d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1474d781fa04SBarry Smith 1475d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1477016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 147874ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1479d382aafbSBarry Smith #endif 1480d382aafbSBarry Smith 14813ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3); 14823ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_ATTRIBUTE_FORMAT(3,4); 14830ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1488d382aafbSBarry Smith 1489014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1495b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1496d382aafbSBarry Smith 1497d382aafbSBarry Smith /* 1498d382aafbSBarry Smith For use in debuggers 1499d382aafbSBarry Smith */ 1500014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1501014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1505d382aafbSBarry Smith 1506a663daf8SBarry Smith #include <stddef.h> 1507a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1508d382aafbSBarry Smith #include <stdlib.h> 15096c7e564aSBarry Smith 15104a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1511d382aafbSBarry Smith #include <xmmintrin.h> 1512d382aafbSBarry Smith #endif 1513d382aafbSBarry Smith 1514d382aafbSBarry Smith /*@C 1515580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1516580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1517580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1518580bdb30SBarry Smith 1519580bdb30SBarry Smith Not Collective 1520580bdb30SBarry Smith 1521580bdb30SBarry Smith Input Parameters: 1522580bdb30SBarry Smith + b - pointer to initial memory space 1523580bdb30SBarry Smith . a - pointer to copy space 1524580bdb30SBarry Smith - n - length (in bytes) of space to copy 1525580bdb30SBarry Smith 1526580bdb30SBarry Smith Level: intermediate 1527580bdb30SBarry Smith 1528580bdb30SBarry Smith Note: 1529857a15f1SBarry Smith PetscArraymove() is preferred 1530580bdb30SBarry Smith This routine is analogous to memmove(). 1531580bdb30SBarry Smith 1532580bdb30SBarry Smith Developers Note: This is inlined for performance 1533580bdb30SBarry Smith 1534580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1535580bdb30SBarry Smith PetscArraymove() 1536580bdb30SBarry Smith @*/ 15379fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1538580bdb30SBarry Smith { 1539580bdb30SBarry Smith PetscFunctionBegin; 15409a202e32SJacob Faibussowitsch if (n > 0) { 15412c71b3e2SJacob Faibussowitsch PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 15422c71b3e2SJacob Faibussowitsch PetscCheck(b,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 15439a202e32SJacob Faibussowitsch } 1544580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1545580bdb30SBarry Smith if (a < b) { 1546580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1547580bdb30SBarry Smith else { 1548580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1549580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1550580bdb30SBarry Smith } 1551580bdb30SBarry Smith } else { 1552580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1553580bdb30SBarry Smith else { 1554580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1555580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1556580bdb30SBarry Smith } 1557580bdb30SBarry Smith } 1558580bdb30SBarry Smith #else 1559580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1560580bdb30SBarry Smith #endif 1561580bdb30SBarry Smith PetscFunctionReturn(0); 1562580bdb30SBarry Smith } 1563580bdb30SBarry Smith 1564d382aafbSBarry Smith /*@C 1565d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1566d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1567d382aafbSBarry Smith PetscMemmove() in that case. 1568d382aafbSBarry Smith 1569d382aafbSBarry Smith Not Collective 1570d382aafbSBarry Smith 1571d382aafbSBarry Smith Input Parameters: 1572d382aafbSBarry Smith + b - pointer to initial memory space 1573d382aafbSBarry Smith - n - length (in bytes) of space to copy 1574d382aafbSBarry Smith 1575d382aafbSBarry Smith Output Parameter: 1576d382aafbSBarry Smith . a - pointer to copy space 1577d382aafbSBarry Smith 1578d382aafbSBarry Smith Level: intermediate 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith Compile Option: 1581d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1582d382aafbSBarry Smith for memory copies on double precision values. 1583d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1584d382aafbSBarry Smith for memory copies on double precision values. 1585d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1586d382aafbSBarry Smith for memory copies on double precision values. 1587d382aafbSBarry Smith 1588d382aafbSBarry Smith Note: 1589580bdb30SBarry Smith Prefer PetscArraycpy() 1590d382aafbSBarry Smith This routine is analogous to memcpy(). 15911fd49c25SBarry Smith Not available from Fortran 15921fd49c25SBarry Smith 1593f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1594f5f57ec0SBarry Smith 1595580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1596d382aafbSBarry Smith 1597d382aafbSBarry Smith @*/ 15989fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1599d382aafbSBarry Smith { 1600d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1601c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1602c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1603a7e36092SMatthew G Knepley PetscFunctionBegin; 16049a202e32SJacob Faibussowitsch if (n > 0) { 16052c71b3e2SJacob Faibussowitsch PetscCheck(b,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 16062c71b3e2SJacob Faibussowitsch PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 16079a202e32SJacob Faibussowitsch } 1608a7e36092SMatthew G Knepley #else 1609d382aafbSBarry Smith PetscFunctionBegin; 1610a7e36092SMatthew G Knepley #endif 1611a47a537aSLisandro Dalcin if (a != b && n > 0) { 1612d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16132c71b3e2SJacob Faibussowitsch PetscCheck(!((al > bl && (al - bl) < nl) || (bl - al) < nl),PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1614d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1615d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1616d382aafbSBarry Smith #endif 1617d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1618c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1619d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1620d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1621c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1622c5df96a5SBarry Smith PetscErrorCode ierr; 1623c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 16248b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1625d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1626d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1627d382aafbSBarry Smith #else 1628d382aafbSBarry Smith size_t i; 1629d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1630d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1631d382aafbSBarry Smith #endif 1632d382aafbSBarry Smith } else { 1633d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1634d382aafbSBarry Smith } 1635d382aafbSBarry Smith #else 1636d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1637d382aafbSBarry Smith #endif 1638d382aafbSBarry Smith } 1639d382aafbSBarry Smith PetscFunctionReturn(0); 1640d382aafbSBarry Smith } 1641d382aafbSBarry Smith 1642d382aafbSBarry Smith /*@C 1643d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1644d382aafbSBarry Smith 1645d382aafbSBarry Smith Not Collective 1646d382aafbSBarry Smith 1647d382aafbSBarry Smith Input Parameters: 1648d382aafbSBarry Smith + a - pointer to beginning memory location 1649d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1650d382aafbSBarry Smith 1651d382aafbSBarry Smith Level: intermediate 1652d382aafbSBarry Smith 1653d382aafbSBarry Smith Compile Option: 1654d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1655d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1656d382aafbSBarry Smith 16571fd49c25SBarry Smith Not available from Fortran 1658857a15f1SBarry Smith Prefer PetscArrayzero() 16591fd49c25SBarry Smith 1660503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1661503cfb0cSBarry Smith 1662580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1663d382aafbSBarry Smith @*/ 16649fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemzero(void *a,size_t n) 1665d382aafbSBarry Smith { 1666d382aafbSBarry Smith if (n > 0) { 1667d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16682c71b3e2SJacob Faibussowitsch PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1669d382aafbSBarry Smith #endif 1670d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1671d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1672d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1673d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1674d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1675d382aafbSBarry Smith } else { 1676d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1677d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1678d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1679d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1680d382aafbSBarry Smith } else { 1681d382aafbSBarry Smith #endif 1682d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1683d382aafbSBarry Smith bzero((char *)a,n); 1684d382aafbSBarry Smith #else 1685d382aafbSBarry Smith memset((char*)a,0,n); 1686d382aafbSBarry Smith #endif 1687d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1688d382aafbSBarry Smith } 1689d382aafbSBarry Smith #endif 1690d382aafbSBarry Smith } 1691d382aafbSBarry Smith return 0; 1692d382aafbSBarry Smith } 1693d382aafbSBarry Smith 1694d382aafbSBarry Smith /*MC 1695580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1696580bdb30SBarry Smith 1697580bdb30SBarry Smith Synopsis: 1698580bdb30SBarry Smith #include <petscsys.h> 1699580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1700580bdb30SBarry Smith 1701580bdb30SBarry Smith Not Collective 1702580bdb30SBarry Smith 1703580bdb30SBarry Smith Input Parameters: 1704580bdb30SBarry Smith + str1 - First array 1705580bdb30SBarry Smith . str2 - Second array 1706580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1707580bdb30SBarry Smith 1708580bdb30SBarry Smith Output Parameters: 1709580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1710580bdb30SBarry Smith 1711580bdb30SBarry Smith Level: intermediate 1712580bdb30SBarry Smith 1713580bdb30SBarry Smith Note: 1714857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1715580bdb30SBarry Smith The arrays must be of the same type 1716580bdb30SBarry Smith 1717580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1718580bdb30SBarry Smith PetscArraymove() 1719580bdb30SBarry Smith M*/ 17209e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1721580bdb30SBarry Smith 17228f8f2f0dSBarry Smith /*MC 1723580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1724580bdb30SBarry Smith do not overlap 1725580bdb30SBarry Smith 1726580bdb30SBarry Smith Synopsis: 1727580bdb30SBarry Smith #include <petscsys.h> 1728580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1729580bdb30SBarry Smith 1730580bdb30SBarry Smith Not Collective 1731580bdb30SBarry Smith 1732580bdb30SBarry Smith Input Parameters: 1733580bdb30SBarry Smith + str1 - First array 1734580bdb30SBarry Smith . str2 - Second array 1735580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1736580bdb30SBarry Smith 1737580bdb30SBarry Smith Level: intermediate 1738580bdb30SBarry Smith 1739580bdb30SBarry Smith Note: 1740857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1741580bdb30SBarry Smith The arrays must be of the same type 1742580bdb30SBarry Smith 1743580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1744580bdb30SBarry Smith M*/ 17459e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1746580bdb30SBarry Smith 17478f8f2f0dSBarry Smith /*MC 1748580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1749580bdb30SBarry Smith 1750580bdb30SBarry Smith Synopsis: 1751580bdb30SBarry Smith #include <petscsys.h> 1752580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1753580bdb30SBarry Smith 1754580bdb30SBarry Smith Not Collective 1755580bdb30SBarry Smith 1756580bdb30SBarry Smith Input Parameters: 1757de25709eSStefano Zampini + str1 - First array (destination) 1758de25709eSStefano Zampini . str2 - Second array (source) 1759580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1760580bdb30SBarry Smith 1761580bdb30SBarry Smith Level: intermediate 1762580bdb30SBarry Smith 1763580bdb30SBarry Smith Note: 1764857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1765580bdb30SBarry Smith The arrays must be of the same type 1766580bdb30SBarry Smith 1767580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1768580bdb30SBarry Smith M*/ 17699e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1770580bdb30SBarry Smith 17718f8f2f0dSBarry Smith /*MC 1772580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1773580bdb30SBarry Smith 1774580bdb30SBarry Smith Synopsis: 1775580bdb30SBarry Smith #include <petscsys.h> 1776580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1777580bdb30SBarry Smith 1778580bdb30SBarry Smith Not Collective 1779580bdb30SBarry Smith 1780580bdb30SBarry Smith Input Parameters: 1781580bdb30SBarry Smith + str1 - array 1782580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1783580bdb30SBarry Smith 1784580bdb30SBarry Smith Level: intermediate 1785580bdb30SBarry Smith 1786580bdb30SBarry Smith Note: 1787857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1788580bdb30SBarry Smith 1789580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1790580bdb30SBarry Smith M*/ 17919e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1792580bdb30SBarry Smith 1793d382aafbSBarry Smith /*MC 1794d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1795d382aafbSBarry Smith 1796eca87e8dSBarry Smith Synopsis: 1797aaa7dc30SBarry Smith #include <petscsys.h> 1798eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1799eca87e8dSBarry Smith 1800d382aafbSBarry Smith Not Collective 1801d382aafbSBarry Smith 1802d382aafbSBarry Smith Input Parameters: 1803d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1804d382aafbSBarry Smith . n - number of elements to fetch 1805d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 180650d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1807d382aafbSBarry Smith 1808d382aafbSBarry Smith Level: developer 1809d382aafbSBarry Smith 1810d382aafbSBarry Smith Notes: 1811d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1812d382aafbSBarry Smith 181350d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 181450d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 181550d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 181663cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 181763cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 181863cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1819d382aafbSBarry Smith 1820d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1821d382aafbSBarry Smith address). 1822d382aafbSBarry Smith 1823d382aafbSBarry Smith M*/ 1824d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1825d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1826d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1827d382aafbSBarry Smith } while (0) 1828d382aafbSBarry Smith 1829d382aafbSBarry Smith /* 1830d382aafbSBarry Smith Determine if some of the kernel computation routines use 1831d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1832d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1833d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1834e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1835d382aafbSBarry Smith */ 1836d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1837d382aafbSBarry Smith 1838d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1839d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1840d382aafbSBarry Smith #endif 1841d382aafbSBarry Smith 18425a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18435a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1844d382aafbSBarry Smith #endif 1845d382aafbSBarry Smith 1846d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1847d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1848d382aafbSBarry Smith #endif 1849d382aafbSBarry Smith 1850d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1851d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1852d382aafbSBarry Smith #endif 1853d382aafbSBarry Smith 1854d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1855d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1856d382aafbSBarry Smith #endif 1857d382aafbSBarry Smith 1858d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1859d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1860d382aafbSBarry Smith #endif 1861d382aafbSBarry Smith 1862d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1863d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1864d382aafbSBarry Smith #endif 1865d382aafbSBarry Smith 1866d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1867d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1868d382aafbSBarry Smith #endif 1869d382aafbSBarry Smith 1870d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1871d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1872d382aafbSBarry Smith #endif 1873d382aafbSBarry Smith 1874d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1875d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1876d382aafbSBarry Smith #endif 1877d382aafbSBarry Smith 1878d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1879d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1880d382aafbSBarry Smith #endif 1881d382aafbSBarry Smith 1882d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1883d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1884d382aafbSBarry Smith #endif 1885d382aafbSBarry Smith 1886d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1887d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1888d382aafbSBarry Smith #endif 1889d382aafbSBarry Smith 1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1892d382aafbSBarry Smith #endif 1893d382aafbSBarry Smith 1894d382aafbSBarry Smith #endif 1895d382aafbSBarry Smith 1896d382aafbSBarry Smith /* 1897d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1898d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1899d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1900d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1901d382aafbSBarry Smith ugly extern "C" {} wrappers. 1902d382aafbSBarry Smith */ 1903d382aafbSBarry Smith #if defined(__cplusplus) 1904d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 1905d382aafbSBarry Smith # define EXTERN_C_END } 1906d382aafbSBarry Smith #else 1907d382aafbSBarry Smith # define EXTERN_C_BEGIN 1908d382aafbSBarry Smith # define EXTERN_C_END 1909d382aafbSBarry Smith #endif 1910d382aafbSBarry Smith 1911d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1912d382aafbSBarry Smith 1913d382aafbSBarry Smith /*MC 1914d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1915d382aafbSBarry Smith communication 1916d382aafbSBarry Smith 1917d382aafbSBarry Smith Level: beginner 1918d382aafbSBarry Smith 1919d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1920d382aafbSBarry Smith 1921d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1922d382aafbSBarry Smith M*/ 1923d382aafbSBarry Smith 1924d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1925014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1926014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1927c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1928c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1929c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1930c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1931d382aafbSBarry Smith #endif 1932d382aafbSBarry Smith 1933d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1934d382aafbSBarry Smith 1935d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1936d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1937d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1938d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1939d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1940d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1941eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 1942d382aafbSBarry Smith 194361b0d812SBarry Smith /*@C 1944c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 1945c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 1946c73702f5SBarry Smith 1947c73702f5SBarry Smith Not Collective 1948c73702f5SBarry Smith 1949c73702f5SBarry Smith Input Parameter: 1950c73702f5SBarry Smith . a - the PetscInt64 value 1951c73702f5SBarry Smith 1952c73702f5SBarry Smith Output Parameter: 1953c73702f5SBarry Smith . b - the resulting PetscInt value 1954c73702f5SBarry Smith 1955c73702f5SBarry Smith Level: advanced 1956c73702f5SBarry Smith 1957c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1958c73702f5SBarry Smith 1959c73702f5SBarry Smith Not available from Fortran 1960c73702f5SBarry Smith 196161778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 1962c73702f5SBarry Smith @*/ 19639fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 1964c73702f5SBarry Smith { 1965c73702f5SBarry Smith PetscFunctionBegin; 1966c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 19673ca90d2dSJacob Faibussowitsch if (a > PETSC_MAX_INT) { 19683ca90d2dSJacob Faibussowitsch *b = 0; 196998921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); 19703ca90d2dSJacob Faibussowitsch } 1971c73702f5SBarry Smith #endif 1972c73702f5SBarry Smith *b = (PetscInt)(a); 1973c73702f5SBarry Smith PetscFunctionReturn(0); 1974c73702f5SBarry Smith } 1975c73702f5SBarry Smith 1976c73702f5SBarry Smith /*@C 1977981bb840SJunchao Zhang PetscCountCast - casts a PetscCount to a PetscInt (which may be 32 bits in size), generates an 1978981bb840SJunchao Zhang error if the PetscInt is not large enough to hold the number. 1979981bb840SJunchao Zhang 1980981bb840SJunchao Zhang Not Collective 1981981bb840SJunchao Zhang 1982981bb840SJunchao Zhang Input Parameter: 1983981bb840SJunchao Zhang . a - the PetscCount value 1984981bb840SJunchao Zhang 1985981bb840SJunchao Zhang Output Parameter: 1986981bb840SJunchao Zhang . b - the resulting PetscInt value 1987981bb840SJunchao Zhang 1988981bb840SJunchao Zhang Level: advanced 1989981bb840SJunchao Zhang 1990981bb840SJunchao Zhang Notes: 1991981bb840SJunchao Zhang If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1992981bb840SJunchao Zhang 1993981bb840SJunchao Zhang Not available from Fortran 1994981bb840SJunchao Zhang 1995981bb840SJunchao Zhang .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError(), PetscIntCast() 1996981bb840SJunchao Zhang @*/ 1997981bb840SJunchao Zhang static inline PetscErrorCode PetscCountCast(PetscCount a,PetscInt *b) 1998981bb840SJunchao Zhang { 1999981bb840SJunchao Zhang PetscFunctionBegin; 2000981bb840SJunchao Zhang if (sizeof(PetscCount) > sizeof(PetscInt) && a > PETSC_MAX_INT) { 2001981bb840SJunchao Zhang *b = 0; 2002981bb840SJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); 2003981bb840SJunchao Zhang } 2004981bb840SJunchao Zhang *b = (PetscInt)(a); 2005981bb840SJunchao Zhang PetscFunctionReturn(0); 2006981bb840SJunchao Zhang } 2007981bb840SJunchao Zhang 2008981bb840SJunchao Zhang /*@C 200961b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 201061b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 201161b0d812SBarry Smith 201261b0d812SBarry Smith Not Collective 201361b0d812SBarry Smith 201461b0d812SBarry Smith Input Parameter: 201561b0d812SBarry Smith . a - the PetscInt value 201661b0d812SBarry Smith 201761b0d812SBarry Smith Output Parameter: 201861b0d812SBarry Smith . b - the resulting PetscBLASInt value 201961b0d812SBarry Smith 202061b0d812SBarry Smith Level: advanced 202161b0d812SBarry Smith 20220bc7d38cSBarry Smith Notes: 20231fd49c25SBarry Smith Not available from Fortran 2024f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 20251fd49c25SBarry Smith 2026981bb840SJunchao Zhang .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast(), PetscCountCast() 202761b0d812SBarry Smith @*/ 20289fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2029c5df96a5SBarry Smith { 2030c5df96a5SBarry Smith PetscFunctionBegin; 203154c59aa7SJacob Faibussowitsch *b = 0; 203254c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) { 203354c59aa7SJacob Faibussowitsch PetscCheck(a <= PETSC_BLAS_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running",a); 203454c59aa7SJacob Faibussowitsch } 203554c59aa7SJacob Faibussowitsch PetscCheck(a >= 0,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2036c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2037c5df96a5SBarry Smith PetscFunctionReturn(0); 2038c5df96a5SBarry Smith } 2039c5df96a5SBarry Smith 204061b0d812SBarry Smith /*@C 2041eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2042eee0c0a6SToby Isaac 2043eee0c0a6SToby Isaac Not Collective 2044eee0c0a6SToby Isaac 2045eee0c0a6SToby Isaac Input Parameter: 2046eee0c0a6SToby Isaac . a - the PetscInt value 2047eee0c0a6SToby Isaac 2048eee0c0a6SToby Isaac Output Parameter: 2049eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2050eee0c0a6SToby Isaac 2051eee0c0a6SToby Isaac Level: advanced 2052eee0c0a6SToby Isaac 2053eee0c0a6SToby Isaac Notes: 2054eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2055eee0c0a6SToby Isaac 2056eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2057eee0c0a6SToby Isaac @*/ 20589fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscCuBLASInt *b) 2059eee0c0a6SToby Isaac { 2060eee0c0a6SToby Isaac PetscFunctionBegin; 206154c59aa7SJacob Faibussowitsch *b = 0; 206254c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_CUBLAS_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32 bit integers.",a); 206354c59aa7SJacob Faibussowitsch PetscCheck(a >= 0,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); 2064eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2065eee0c0a6SToby Isaac PetscFunctionReturn(0); 2066eee0c0a6SToby Isaac } 2067eee0c0a6SToby Isaac 2068eee0c0a6SToby Isaac /*@C 206961b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 207061b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 207161b0d812SBarry Smith 207261b0d812SBarry Smith Not Collective 207361b0d812SBarry Smith 207461b0d812SBarry Smith Input Parameter: 207561b0d812SBarry Smith . a - the PetscInt value 207661b0d812SBarry Smith 207761b0d812SBarry Smith Output Parameter: 207861b0d812SBarry Smith . b - the resulting PetscMPIInt value 207961b0d812SBarry Smith 208061b0d812SBarry Smith Level: advanced 208161b0d812SBarry Smith 20821fd49c25SBarry Smith Not available from Fortran 20831fd49c25SBarry Smith 2084c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 208561b0d812SBarry Smith @*/ 20869fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 20874dc2109aSBarry Smith { 20884dc2109aSBarry Smith PetscFunctionBegin; 208954c59aa7SJacob Faibussowitsch *b = 0; 209054c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_MPI_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for MPI buffer length. We currently only support 32 bit integers",a); 2091c73702f5SBarry Smith *b = (PetscMPIInt)(a); 20924dc2109aSBarry Smith PetscFunctionReturn(0); 20934dc2109aSBarry Smith } 20944dc2109aSBarry Smith 2095bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 20962f18eb33SBarry Smith 20972f18eb33SBarry Smith /*@C 20982f18eb33SBarry Smith 20992f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 21002f18eb33SBarry Smith 21012f18eb33SBarry Smith Not Collective 21022f18eb33SBarry Smith 2103d8d19677SJose E. Roman Input Parameters: 21042f18eb33SBarry Smith + a - the PetscReal value 21052f18eb33SBarry Smith - b - the second value 21062f18eb33SBarry Smith 2107390e1bf2SBarry Smith Returns: 2108390e1bf2SBarry Smith the result as a PetscInt value 21092f18eb33SBarry Smith 2110bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21112f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 21122f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21132f18eb33SBarry Smith 2114e28ce29aSPatrick Sanan Developers Note: 2115e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21162f18eb33SBarry Smith 21172f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21182f18eb33SBarry Smith 21191fd49c25SBarry Smith Not available from Fortran 21201fd49c25SBarry Smith 21212f18eb33SBarry Smith Level: advanced 21222f18eb33SBarry Smith 212361778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 21242f18eb33SBarry Smith @*/ 21259fbee547SJacob Faibussowitsch static inline PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 21262f18eb33SBarry Smith { 2127bafee8b4SSatish Balay PetscInt64 r; 21282f18eb33SBarry Smith 2129bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 21302f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21312f18eb33SBarry Smith return (PetscInt) r; 21322f18eb33SBarry Smith } 21332f18eb33SBarry Smith 21342f18eb33SBarry Smith /*@C 21352f18eb33SBarry Smith 21362f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 21372f18eb33SBarry Smith 21382f18eb33SBarry Smith Not Collective 21392f18eb33SBarry Smith 2140d8d19677SJose E. Roman Input Parameters: 21412f18eb33SBarry Smith + a - the PetscInt value 21422f18eb33SBarry Smith - b - the second value 21432f18eb33SBarry Smith 2144390e1bf2SBarry Smith Returns: 2145390e1bf2SBarry Smith the result as a PetscInt value 21462f18eb33SBarry Smith 2147bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21482f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 21492f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21502f18eb33SBarry Smith 21511fd49c25SBarry Smith Not available from Fortran 21521fd49c25SBarry Smith 21532f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21542f18eb33SBarry Smith 21552f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21562f18eb33SBarry Smith 21572f18eb33SBarry Smith Level: advanced 21582f18eb33SBarry Smith 215961778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 21602f18eb33SBarry Smith @*/ 21619fbee547SJacob Faibussowitsch static inline PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 21622f18eb33SBarry Smith { 2163bafee8b4SSatish Balay PetscInt64 r; 21642f18eb33SBarry Smith 2165bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 21662f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21672f18eb33SBarry Smith return (PetscInt) r; 21682f18eb33SBarry Smith } 21692f18eb33SBarry Smith 2170f91af8c7SBarry Smith /*@C 2171f91af8c7SBarry Smith 2172f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2173f91af8c7SBarry Smith 2174f91af8c7SBarry Smith Not Collective 2175f91af8c7SBarry Smith 2176d8d19677SJose E. Roman Input Parameters: 2177f91af8c7SBarry Smith + a - the PetscInt value 2178f91af8c7SBarry Smith - b - the second value 2179f91af8c7SBarry Smith 2180390e1bf2SBarry Smith Returns: 2181390e1bf2SBarry Smith the result as a PetscInt value 2182f91af8c7SBarry Smith 2183bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2184f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2185f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2186f91af8c7SBarry Smith 2187f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2188f91af8c7SBarry Smith 2189f5f57ec0SBarry Smith Not available from Fortran 2190f5f57ec0SBarry Smith 2191f91af8c7SBarry Smith Level: advanced 2192f91af8c7SBarry Smith 219361778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2194f91af8c7SBarry Smith @*/ 21959fbee547SJacob Faibussowitsch static inline PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2196f91af8c7SBarry Smith { 2197bafee8b4SSatish Balay PetscInt64 r; 2198f91af8c7SBarry Smith 2199bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2200f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2201f91af8c7SBarry Smith return (PetscInt) r; 2202f91af8c7SBarry Smith } 2203f91af8c7SBarry Smith 22042f18eb33SBarry Smith /*@C 22052f18eb33SBarry Smith 22062f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 22072f18eb33SBarry Smith 22082f18eb33SBarry Smith Not Collective 22092f18eb33SBarry Smith 2210d8d19677SJose E. Roman Input Parameters: 22112f18eb33SBarry Smith + a - the PetscInt value 22122f18eb33SBarry Smith - b - the second value 22132f18eb33SBarry Smith 2214d8d19677SJose E. Roman Output Parameter: 2215390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 22162f18eb33SBarry Smith 2217bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 22182f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 22192f18eb33SBarry Smith 2220f5f57ec0SBarry Smith Not available from Fortran 2221f5f57ec0SBarry Smith 2222220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 22232f18eb33SBarry Smith 22242f18eb33SBarry Smith Level: advanced 22252f18eb33SBarry Smith 2226220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 22272f18eb33SBarry Smith @*/ 22289fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 22292f18eb33SBarry Smith { 2230bafee8b4SSatish Balay PetscInt64 r; 22312f18eb33SBarry Smith 22322f18eb33SBarry Smith PetscFunctionBegin; 2233bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22342f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22352c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT,PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 22362f18eb33SBarry Smith #endif 2237f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2238f91af8c7SBarry Smith PetscFunctionReturn(0); 2239f91af8c7SBarry Smith } 2240f91af8c7SBarry Smith 2241f91af8c7SBarry Smith /*@C 2242f91af8c7SBarry Smith 2243fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2244f91af8c7SBarry Smith 2245f91af8c7SBarry Smith Not Collective 2246f91af8c7SBarry Smith 2247d8d19677SJose E. Roman Input Parameters: 2248f91af8c7SBarry Smith + a - the PetscInt value 2249f91af8c7SBarry Smith - b - the second value 2250f91af8c7SBarry Smith 2251d8d19677SJose E. Roman Output Parameter: 2252390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2253f91af8c7SBarry Smith 2254bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2255f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2256f91af8c7SBarry Smith 2257f5f57ec0SBarry Smith Not available from Fortran 2258f5f57ec0SBarry Smith 2259f91af8c7SBarry Smith Level: advanced 2260f91af8c7SBarry Smith 226161778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2262f91af8c7SBarry Smith @*/ 22639fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2264f91af8c7SBarry Smith { 2265bafee8b4SSatish Balay PetscInt64 r; 2266f91af8c7SBarry Smith 2267f91af8c7SBarry Smith PetscFunctionBegin; 2268bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2269f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22702c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT,PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2271f91af8c7SBarry Smith #endif 2272f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 22732f18eb33SBarry Smith PetscFunctionReturn(0); 22742f18eb33SBarry Smith } 2275c5df96a5SBarry Smith 2276d382aafbSBarry Smith /* 22772981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2278d382aafbSBarry Smith */ 2279d382aafbSBarry Smith #if defined(hz) 2280d382aafbSBarry Smith # undef hz 2281d382aafbSBarry Smith #endif 2282d382aafbSBarry Smith 228315a5570dSLisandro Dalcin #include <limits.h> 228415a5570dSLisandro Dalcin 228515a5570dSLisandro Dalcin /* The number of bits in a byte */ 228615a5570dSLisandro Dalcin 228715a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 228815a5570dSLisandro Dalcin 2289d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2290d382aafbSBarry Smith # include <sys/types.h> 2291d382aafbSBarry Smith #endif 2292d382aafbSBarry Smith 2293d382aafbSBarry Smith /*MC 2294d382aafbSBarry Smith 229566d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 229666d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 229766d79e26SBarry Smith 229866d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 229966d79e26SBarry Smith 230066d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 230166d79e26SBarry Smith 230266d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 230366d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 230466d79e26SBarry Smith 230566d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 230666d79e26SBarry Smith 230766d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 230866d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 230966d79e26SBarry Smith version number (x.y.z). 231066d79e26SBarry Smith 231166d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 231266d79e26SBarry Smith 231366d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 231466d79e26SBarry Smith 231566d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 231666d79e26SBarry Smith 231766d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 231866d79e26SBarry Smith 2319cbc12506SBarry Smith PETSC_VERSION_() is deprecated and will eventually be removed. 232066d79e26SBarry Smith 2321cbc12506SBarry Smith Level: intermediate 232266d79e26SBarry Smith 232366d79e26SBarry Smith M*/ 232466d79e26SBarry Smith 2325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 233127710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 23325f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2333d382aafbSBarry Smith 23346a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 23356a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 23366a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2338ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 233922ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2341f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 234260e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2343d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2347981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount,PetscInt[],PetscCount[]); 23486c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 2349981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount,PetscInt[],PetscInt[],PetscCount[]); 235017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 235117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 23535569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 235517df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 235739f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2359745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 236039f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 23646c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 23656c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2366e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2367ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2368ce605777SToby Isaac 23694d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2370676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2371676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2372676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 23734d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2374676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2375676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2376676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2377676f2a66SJacob Faibussowitsch 2378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2380d382aafbSBarry Smith 238176bdecfbSBarry Smith /*J 2382d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2383d382aafbSBarry Smith 2384d382aafbSBarry Smith Level: beginner 2385d382aafbSBarry Smith 2386e28ce29aSPatrick Sanan Notes: 2387e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 238825ccb61fSToby Isaac with the option --download-sprng or --download-random123 2389d382aafbSBarry Smith 23908f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 239176bdecfbSBarry Smith J*/ 239219fd82e9SBarry Smith typedef const char* PetscRandomType; 2393d382aafbSBarry Smith #define PETSCRAND "rand" 2394d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2395d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2396c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 239725ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2398808ba619SStefano Zampini #define PETSCCURAND "curand" 2399d382aafbSBarry Smith 2400d382aafbSBarry Smith /* Logging support */ 2401014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2402d382aafbSBarry Smith 2403607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2404d382aafbSBarry Smith 2405d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2406140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2407d382aafbSBarry Smith 2408bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 240919fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 241119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2412fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2414d382aafbSBarry Smith 2415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2418808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2419808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2426d382aafbSBarry Smith 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 243497540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24358a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 243697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2437d382aafbSBarry Smith 24389fbee547SJacob Faibussowitsch static inline PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 243930815ce0SLisandro Dalcin 24409860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 24419860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2442f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2443f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2451c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2452e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2453c891a504SStefano Zampini #endif 2454d382aafbSBarry Smith 2455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2458d382aafbSBarry Smith 2459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 24652a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2466d382aafbSBarry Smith 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2472cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2473cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2474d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2475d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2476d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2477d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 24786afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 24796afbe7ddSJed Brown MPI_Request**,MPI_Request**, 24806afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 24816afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 24826afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2483d382aafbSBarry Smith 24846145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 24856145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 24866145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 24876145cd65SJed Brown 2488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2489d382aafbSBarry Smith 2490ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2491ce94432eSBarry Smith 249245487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 249345487dadSJed Brown 2494d382aafbSBarry Smith struct _n_PetscSubcomm { 2495d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2496d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2497306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 249845487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 249945487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2500708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 250145487dadSJed Brown PetscSubcommType type; 2502e5acf8a4SHong Zhang char *subcommprefix; 2503d382aafbSBarry Smith }; 2504d382aafbSBarry Smith 25059fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 25069fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 25079fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 251265d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2513053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2514f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2515e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2516a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2517a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2518a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2519d382aafbSBarry Smith 25209962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 25219962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 25229962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 25239962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 25249962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 25259962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25269962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 25279962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 25289962606eSBarry Smith 25295e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25305f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 25315f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25325f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25335f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 25345e71baefSBarry Smith 2535a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2536a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2537a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2538a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2539a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2540a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2541a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2542a32e93adSJunchao Zhang 254313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 25440f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 254513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2546137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2547137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2548137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 254913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 255013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 25510f453b92SJed Brown 2552471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2553471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2554471ecdacSJed Brown * possible. */ 25559fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2556d382aafbSBarry Smith 25579de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 25589de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 25599de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 25609de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 25619de0f6ecSBarry Smith 2562ace2fbaeSBarry Smith #include <stdarg.h> 2563ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2564ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2565ace2fbaeSBarry Smith 2566268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2567fbfcfee5SBarry Smith 25681f817a21SBarry Smith /*@C 25691f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 25701f817a21SBarry Smith 25711f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 25721f817a21SBarry Smith 25731f817a21SBarry Smith Input Parameters: 25741f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 25751f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 25761f817a21SBarry Smith 2577850545d0SSatish Balay Level: intermediate 2578850545d0SSatish Balay 2579f5f57ec0SBarry Smith Not available from Fortran 2580f5f57ec0SBarry Smith 25811f817a21SBarry Smith Options Database: 2582063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 25831f817a21SBarry Smith @*/ 25849fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2585dff31646SBarry Smith { 2586dff31646SBarry Smith size_t len; 2587dff31646SBarry Smith char *vstring; 2588dff31646SBarry Smith PetscErrorCode ierr; 2589dff31646SBarry Smith 25901f817a21SBarry Smith PetscFunctionBegin; 25918d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2592dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 259335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2594580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2595dff31646SBarry Smith if (set) *set = PETSC_TRUE; 25961f817a21SBarry Smith PetscFunctionReturn(0); 2597dff31646SBarry Smith } 2598dff31646SBarry Smith 2599b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2600fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2601fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2602f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2603fe278a28SBarry Smith 2604f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2605f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2606b967cddfSBarry Smith 26079f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 26089f4d3c52SBarry Smith 260904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2610763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2611dff31646SBarry Smith 261268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 26135dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2614d382aafbSBarry Smith 2615b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 26169fbee547SJacob Faibussowitsch static inline unsigned int PetscStrHash(const char *str) 2617df05ca09SBarry Smith { 2618df05ca09SBarry Smith unsigned int c,hash = 5381; 2619df05ca09SBarry Smith 2620503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2621df05ca09SBarry Smith return hash; 2622df05ca09SBarry Smith } 262377a5e07dSBarry Smith 262477a5e07dSBarry Smith /*MC 262577a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 262677a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 262777a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 262877a5e07dSBarry Smith 2629d083f849SBarry Smith Collective 263077a5e07dSBarry Smith 263177a5e07dSBarry Smith Synopsis: 263277a5e07dSBarry Smith #include <petscsys.h> 263377a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 263477a5e07dSBarry Smith 263577a5e07dSBarry Smith Input Parameters: 2636df05ca09SBarry Smith + a - pointer to the input data to be reduced 2637df05ca09SBarry Smith . c - the number of MPI data items in a and b 2638df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2639df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2640df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 264177a5e07dSBarry Smith 264277a5e07dSBarry Smith Output Parameter: 2643df05ca09SBarry Smith . b - the reduced values 264477a5e07dSBarry Smith 2645e28ce29aSPatrick Sanan Notes: 2646e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 264777a5e07dSBarry Smith 2648df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2649df05ca09SBarry Smith 2650df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2651df05ca09SBarry Smith 265277a5e07dSBarry Smith Level: developer 265377a5e07dSBarry Smith 265477a5e07dSBarry Smith .seealso: MPI_Allreduce() 265577a5e07dSBarry Smith M*/ 2656df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do { \ 2657df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2658df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6]; \ 26593ca90d2dSJacob Faibussowitsch int _mpiu_allreduce_c_int = (int)c; \ 2660df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2661df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2662df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2663df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 26642c71b3e2SJacob Faibussowitsch PetscCheck(-a_b2[0] == a_b2[1],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 26652c71b3e2SJacob Faibussowitsch PetscCheck(-a_b2[2] == a_b2[3],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 26662c71b3e2SJacob Faibussowitsch PetscCheck(-a_b2[4] == a_b2[5],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",_mpiu_allreduce_c_int); \ 2667df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2668df05ca09SBarry Smith } while (0) 2669b2566f29SBarry Smith #else 2670df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2671b2566f29SBarry Smith #endif 2672b2566f29SBarry Smith 2673b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 26748198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 26758198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 26762f065d89SBarry Smith #endif 26778198064fSBarry Smith 2678cd88fca5SStefano Zampini /* this is a vile hack */ 2679cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 2680961fb248SStefano Zampini #if !defined(PETSC_NECMPI_VERSION_MAJOR) || \ 2681961fb248SStefano Zampini !defined(PETSC_NECMPI_VERSION_MINOR) || \ 2682961fb248SStefano Zampini PETSC_NECMPI_VERSION_MAJOR < 2 || \ 2683961fb248SStefano Zampini (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2684cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0); 2685cd88fca5SStefano Zampini #endif 2686961fb248SStefano Zampini #endif 2687cd88fca5SStefano Zampini 268812801b39SBarry Smith /* 268960fbe2beSVaclav Hapla List of external packages and queries on it 269060fbe2beSVaclav Hapla */ 269160fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 269260fbe2beSVaclav Hapla 2693a52b435bSMark Adams /* 2694a52b435bSMark Adams OpenMP support 2695a52b435bSMark Adams */ 2696a52b435bSMark Adams #if defined(_OPENMP) 2697a52b435bSMark Adams #define PetscPragmaOMP(...) _Pragma(PetscStringize(omp __VA_ARGS__)) 2698a52b435bSMark Adams #else // no OpenMP so no threads 2699a52b435bSMark Adams #define PetscPragmaOMP(...) 2700a52b435bSMark Adams #endif 2701a52b435bSMark Adams 2702d382aafbSBarry Smith #endif 2703