1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1720c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 1805035670SJunchao Zhang #define PETSC_HAVE_DEVICE 1905035670SJunchao Zhang #endif 2005035670SJunchao Zhang 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith /* 442c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 45d382aafbSBarry Smith */ 461ec50b02SJed Brown #if defined(__cplusplus) 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 481ec50b02SJed Brown #else 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 501ec50b02SJed Brown #endif 51d382aafbSBarry Smith 52c5e4d11fSDmitry Karpeev /* ========================================================================== */ 53c5e4d11fSDmitry Karpeev /* 54c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 551cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 561cc8b206SBarry Smith file within an extern "C". 57c5e4d11fSDmitry Karpeev */ 58c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 59c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 60c5e4d11fSDmitry Karpeev #endif 61c5e4d11fSDmitry Karpeev 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ed938b00SJed Brown #if defined(__cplusplus) 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 70ed938b00SJed Brown #else 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 72ed938b00SJed Brown #endif 73ed938b00SJed Brown 7458c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7558c433abSLisandro Dalcin 76ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 77014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 78014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8126703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8226703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8326703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 85014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 86014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 88d382aafbSBarry Smith #else 89014dd563SJed Brown # define PETSC_DLLEXPORT 90014dd563SJed Brown # define PETSC_DLLIMPORT 9121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 92014dd563SJed Brown #endif 93014dd563SJed Brown 94014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 96014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 98014dd563SJed Brown #endif 99014dd563SJed Brown 1001cc8b206SBarry Smith /* 1011cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1021cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1031cc8b206SBarry Smith used from C and are always visible in the shared libraries 1041cc8b206SBarry Smith */ 1052c280183SJed Brown #if defined(__cplusplus) 106014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10821f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 109014dd563SJed Brown #else 110014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 111638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1126258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 113d382aafbSBarry Smith #endif 11427710113SBarry Smith 1152c8e378dSBarry Smith #include <petscversion.h> 116a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 117d382aafbSBarry Smith 118d382aafbSBarry Smith /* ========================================================================== */ 119d382aafbSBarry Smith 120d382aafbSBarry Smith /* 121d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 122d382aafbSBarry Smith 123d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 124d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 125d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 126d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 127d382aafbSBarry Smith mpicxx.h directly in their code 128d382aafbSBarry Smith */ 129fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 130d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 131fa9e63e2SJed Brown #endif 132fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 133d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 134fa9e63e2SJed Brown #endif 135e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 136e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 137e771154cSJed Brown #else 1382c8e378dSBarry Smith # include <mpi.h> 139e771154cSJed Brown #endif 14065013866SBarry Smith 1414e1ad211SJed Brown /*MC 1424e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1434e1ad211SJed Brown 1444e1ad211SJed Brown Notes: 1454e1ad211SJed Brown Typical usage is within normal code, 1464e1ad211SJed Brown 1474e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1484e1ad211SJed Brown 1494e1ad211SJed Brown but can also be used in the preprocessor, 1504e1ad211SJed Brown 1514e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1524e1ad211SJed Brown $ ... 1534e1ad211SJed Brown $ #else 1544e1ad211SJed Brown 1554e1ad211SJed Brown Either way evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1) or undefined. This macro 1564e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1574e1ad211SJed Brown 1584e1ad211SJed Brown Developer Notes: 1594e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1604e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1614e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1624e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1634e1ad211SJed Brown 1644e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1654e1ad211SJed Brown implementation of variadic macros. 1664e1ad211SJed Brown 1674e1ad211SJed Brown Level: developer 1684e1ad211SJed Brown M*/ 1694e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1704e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1714e1ad211SJed Brown # define PetscDefined_arg_ shift, 1724e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1734e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1744e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1754e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1764e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1774e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1784e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1794e1ad211SJed Brown #endif 1804e1ad211SJed Brown 181d382aafbSBarry Smith /* 182a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 183a7886beaSBarry Smith This usually happens because 184a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 185a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 186a7886beaSBarry Smith */ 187a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 188c9b973beSBarry Smith # if !defined(MPIUNI_H) 189a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 190a7886beaSBarry Smith # endif 19141f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 19241f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 19341f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 19441f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 19541f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 19641f4af4cSSatish Balay # endif 19741f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 19841f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 19941f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 20041f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 20141f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 20241f4af4cSSatish Balay # endif 203a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 20441f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 205a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 206ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 207a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 208a7886beaSBarry Smith # endif 209a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 210a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 211a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 212ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 213c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 214a7886beaSBarry Smith # endif 215d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 216d97fd468SStefano Zampini # if !defined(MSMPI_VER) 217d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 218d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 219d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 220d97fd468SStefano Zampini # endif 221d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 222d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 223a7886beaSBarry Smith #endif 224a7886beaSBarry Smith 225a7886beaSBarry Smith /* 2262981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 227d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 228d382aafbSBarry Smith */ 229d382aafbSBarry Smith #include <stdio.h> 230d382aafbSBarry Smith 231d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 232d382aafbSBarry Smith #if !defined(MPIAPI) 233d382aafbSBarry Smith #define MPIAPI 234d382aafbSBarry Smith #endif 235d382aafbSBarry Smith 2361cc8b206SBarry Smith /* 2371cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2381cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2391cc8b206SBarry Smith does not match the actual type of the argument being passed in 2401cc8b206SBarry Smith */ 241c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 242894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 243894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2448ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2458ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 246894dd566SJed Brown # endif 247894dd566SJed Brown #endif 248894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 249894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2508ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2518ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 252894dd566SJed Brown #endif 253b3506946SBarry Smith 2545a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 255df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 256e28ce29aSPatrick Sanan 257e28ce29aSPatrick Sanan /*MC 258e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 259e28ce29aSPatrick Sanan 260e28ce29aSPatrick Sanan Notes: 261e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 262e28ce29aSPatrick Sanan 263e28ce29aSPatrick Sanan Level: beginner 264e28ce29aSPatrick Sanan 265e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 266e28ce29aSPatrick Sanan M*/ 267e28ce29aSPatrick Sanan 26837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 269bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 270a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 271fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 272bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 273a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 274f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 275bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 276a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 277236ed0a3SSatish Balay #else 278bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 279236ed0a3SSatish Balay #endif 280b7b8f77aSBarry Smith 2817cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 282b7b8f77aSBarry Smith 283d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 284bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 285a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 286d382aafbSBarry Smith #else 287d382aafbSBarry Smith # define MPIU_INT MPI_INT 288a05e1a72SSatish Balay # define PetscInt_FMT "d" 289d382aafbSBarry Smith #endif 290d382aafbSBarry Smith 291503cfb0cSBarry Smith /* 292503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 293503cfb0cSBarry Smith */ 294e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 295d382aafbSBarry Smith 296d382aafbSBarry Smith /* 297d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 298d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 299d382aafbSBarry Smith */ 300014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 301d382aafbSBarry Smith 302d382aafbSBarry Smith /* 303d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 304d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 305d382aafbSBarry Smith */ 306014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 307d382aafbSBarry Smith 308d382aafbSBarry Smith /*MC 309d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 310d382aafbSBarry Smith 311d382aafbSBarry Smith Synopsis: 312aaa7dc30SBarry Smith #include <petscsys.h> 313ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 314d382aafbSBarry Smith 315eca87e8dSBarry Smith Not Collective 316eca87e8dSBarry Smith 317d382aafbSBarry Smith Input Parameters: 318d382aafbSBarry Smith . cond - condition or expression 319d382aafbSBarry Smith 320e28ce29aSPatrick Sanan Notes: 321e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 322d382aafbSBarry Smith branch is unlikely. 323d382aafbSBarry Smith 324d382aafbSBarry Smith Level: advanced 325d382aafbSBarry Smith 326cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 327d382aafbSBarry Smith M*/ 328d382aafbSBarry Smith 329d382aafbSBarry Smith /*MC 330d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 331d382aafbSBarry Smith 332d382aafbSBarry Smith Synopsis: 333aaa7dc30SBarry Smith #include <petscsys.h> 33423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 335d382aafbSBarry Smith 336eca87e8dSBarry Smith Not Collective 337eca87e8dSBarry Smith 338d382aafbSBarry Smith Input Parameters: 339d382aafbSBarry Smith . cond - condition or expression 340d382aafbSBarry Smith 341e28ce29aSPatrick Sanan Notes: 342e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 343d382aafbSBarry Smith branch is likely. 344d382aafbSBarry Smith 345d382aafbSBarry Smith Level: advanced 346d382aafbSBarry Smith 347d382aafbSBarry Smith .seealso: PetscUnlikely() 348d382aafbSBarry Smith M*/ 349d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 350d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 351d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 352d382aafbSBarry Smith #else 353cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 354cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 355d382aafbSBarry Smith #endif 356d382aafbSBarry Smith 357cf9c20a2SJed Brown /*MC 358cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 359cf9c20a2SJed Brown 360cf9c20a2SJed Brown Synopsis: 361cf9c20a2SJed Brown #include <petscsys.h> 362cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 363cf9c20a2SJed Brown 364cf9c20a2SJed Brown Not Collective 365cf9c20a2SJed Brown 366cf9c20a2SJed Brown Input Parameters: 367cf9c20a2SJed Brown . cond - condition or expression 368cf9c20a2SJed Brown 369cf9c20a2SJed Brown Notes: 370cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 371cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 372cf9c20a2SJed Brown 373cf9c20a2SJed Brown Level: advanced 374cf9c20a2SJed Brown 375cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 376cf9c20a2SJed Brown M*/ 377cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 378cf9c20a2SJed Brown 379c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 380c8b9133aSSatish Balay 381c8b9133aSSatish Balay #if defined(__INTEL_COMPILER) && !defined(_WIN32) 382c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 383c8b9133aSSatish Balay #elif defined(__GNUC__) && __GNUC__ >= 5 384c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 385c8b9133aSSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 386c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 387c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 388c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 389c8b9133aSSatish Balay #else 390c8b9133aSSatish Balay # define PetscPragmaSIMD 391c8b9133aSSatish Balay #endif 392c8b9133aSSatish Balay 393d382aafbSBarry Smith /* 394d382aafbSBarry Smith Declare extern C stuff after including external header files 395d382aafbSBarry Smith */ 396d382aafbSBarry Smith 3976a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 39870b3c8c7SBarry Smith 3998b49ba18SBarry Smith /* 400390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4018b49ba18SBarry Smith */ 4028b49ba18SBarry Smith #include <petscmath.h> 4038b49ba18SBarry Smith 4046a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 405d382aafbSBarry Smith 406d382aafbSBarry Smith /*MC 4070298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 408d382aafbSBarry Smith 409d382aafbSBarry Smith Level: beginner 410d382aafbSBarry Smith 411e28ce29aSPatrick Sanan Note: 412e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 413d382aafbSBarry Smith some default 414d382aafbSBarry Smith 415e28ce29aSPatrick Sanan Fortran Notes: 416e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 417d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 418d382aafbSBarry Smith 419e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 420d382aafbSBarry Smith 421d382aafbSBarry Smith M*/ 4220298fd71SBarry Smith #define PETSC_IGNORE NULL 423d382aafbSBarry Smith 424c528d872SBarry Smith /* This is deprecated */ 425c528d872SBarry Smith #define PETSC_NULL NULL 426c528d872SBarry Smith 427d382aafbSBarry Smith /*MC 428557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 429557d4da8SBarry Smith where you wish PETSc to use the default. 430557d4da8SBarry Smith 431557d4da8SBarry Smith Level: beginner 432557d4da8SBarry Smith 433e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 434557d4da8SBarry Smith 435557d4da8SBarry Smith M*/ 436557d4da8SBarry Smith #define PETSC_DECIDE -1 437557d4da8SBarry Smith 438557d4da8SBarry Smith /*MC 439d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 440d382aafbSBarry Smith where you wish PETSc to compute the required value. 441d382aafbSBarry Smith 442d382aafbSBarry Smith Level: beginner 443d382aafbSBarry Smith 444e28ce29aSPatrick Sanan Developer Note: 445e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 446557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 447557d4da8SBarry Smith 4480298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 449d382aafbSBarry Smith 450d382aafbSBarry Smith M*/ 451d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 452d382aafbSBarry Smith 453d382aafbSBarry Smith /*MC 454557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 455557d4da8SBarry Smith where you wish PETSc to use the default. 456557d4da8SBarry Smith 457557d4da8SBarry Smith Level: beginner 458557d4da8SBarry Smith 459e28ce29aSPatrick Sanan Fortran Notes: 460e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 461557d4da8SBarry Smith 4620298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 463557d4da8SBarry Smith 464557d4da8SBarry Smith M*/ 465557d4da8SBarry Smith #define PETSC_DEFAULT -2 466557d4da8SBarry Smith 467557d4da8SBarry Smith /*MC 468d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 469ea8fe74dSBarry Smith all the processes that PETSc knows about. 470d382aafbSBarry Smith 471d382aafbSBarry Smith Level: beginner 472d382aafbSBarry Smith 473e28ce29aSPatrick Sanan Notes: 474e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 475d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 476d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 477a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 478a990b902SBarry Smith 479a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 480a990b902SBarry Smith is called because it may not have a valid value yet. 481d382aafbSBarry Smith 482d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 483d382aafbSBarry Smith 484d382aafbSBarry Smith M*/ 485014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 486d382aafbSBarry Smith 487d382aafbSBarry Smith /*MC 488503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 489d382aafbSBarry Smith 490d382aafbSBarry Smith Level: beginner 491d382aafbSBarry Smith 492e28ce29aSPatrick Sanan Notes: 493e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 494a990b902SBarry Smith 495d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 496d382aafbSBarry Smith 497d382aafbSBarry Smith M*/ 498d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 499d382aafbSBarry Smith 5006de5d289SStefano Zampini /*MC 5016de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5026de5d289SStefano Zampini MPI with MPI_Init_thread. 5036de5d289SStefano Zampini 5046de5d289SStefano Zampini Level: beginner 5056de5d289SStefano Zampini 5066de5d289SStefano Zampini Notes: 5076de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5086de5d289SStefano Zampini 5096de5d289SStefano Zampini .seealso: PetscInitialize() 5106de5d289SStefano Zampini 5116de5d289SStefano Zampini M*/ 5126de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5136de5d289SStefano Zampini 514d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5158ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 516014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 517014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5184cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 519d382aafbSBarry Smith 520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 523d382aafbSBarry Smith 5247381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 52505035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 526cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5273c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5287381773fSBarry Smith #endif 5297381773fSBarry Smith 53005035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 53105035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 53205035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5333c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 53405035670SJunchao Zhang #endif 53505035670SJunchao Zhang 536*59e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 537*59e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 538*59e55d94SJunchao Zhang #endif 539*59e55d94SJunchao Zhang 540540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 541540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 542540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 543540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 544540e20f2SPierre Jolivet #endif 545540e20f2SPierre Jolivet 546d382aafbSBarry Smith /*MC 54795dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 548d382aafbSBarry Smith 549eca87e8dSBarry Smith Synopsis: 550aaa7dc30SBarry Smith #include <petscsys.h> 551eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 552eca87e8dSBarry Smith 553eca87e8dSBarry Smith Not Collective 554eca87e8dSBarry Smith 555d382aafbSBarry Smith Input Parameter: 556d382aafbSBarry Smith . m - number of bytes to allocate 557d382aafbSBarry Smith 558d382aafbSBarry Smith Output Parameter: 559d382aafbSBarry Smith . result - memory allocated 560d382aafbSBarry Smith 561d382aafbSBarry Smith Level: beginner 562d382aafbSBarry Smith 56349d7da52SJed Brown Notes: 56449d7da52SJed Brown Memory is always allocated at least double aligned 565d382aafbSBarry Smith 56649d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 567d382aafbSBarry Smith 568d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 569d382aafbSBarry Smith 570d382aafbSBarry Smith M*/ 571071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 572d382aafbSBarry Smith 573d382aafbSBarry Smith /*MC 5743221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5753221ece2SMatthew G. Knepley 5763221ece2SMatthew G. Knepley Synopsis: 5773221ece2SMatthew G. Knepley #include <petscsys.h> 5783221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5793221ece2SMatthew G. Knepley 5803221ece2SMatthew G. Knepley Not Collective 5813221ece2SMatthew G. Knepley 5823221ece2SMatthew G. Knepley Input Parameters: 5833221ece2SMatthew G. Knepley + m - number of bytes to allocate 58492f119d6SBarry Smith - result - previous memory 5853221ece2SMatthew G. Knepley 5863221ece2SMatthew G. Knepley Output Parameter: 5873221ece2SMatthew G. Knepley . result - new memory allocated 5883221ece2SMatthew G. Knepley 5893221ece2SMatthew G. Knepley Level: developer 5903221ece2SMatthew G. Knepley 5913221ece2SMatthew G. Knepley Notes: 5923221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 5933221ece2SMatthew G. Knepley 5943221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 5953221ece2SMatthew G. Knepley 5963221ece2SMatthew G. Knepley M*/ 5973221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 5983221ece2SMatthew G. Knepley 5993221ece2SMatthew G. Knepley /*MC 600503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 601d382aafbSBarry Smith 602d382aafbSBarry Smith Synopsis: 603aaa7dc30SBarry Smith #include <petscsys.h> 604d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 605d382aafbSBarry Smith 606eca87e8dSBarry Smith Not Collective 607eca87e8dSBarry Smith 608eca87e8dSBarry Smith Input Parameters: 609eca87e8dSBarry Smith . addr - address to align (any pointer type) 610eca87e8dSBarry Smith 611d382aafbSBarry Smith Level: developer 612d382aafbSBarry Smith 613d382aafbSBarry Smith .seealso: PetscMallocAlign() 614d382aafbSBarry Smith 615d382aafbSBarry Smith M*/ 616d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 617d382aafbSBarry Smith 618d382aafbSBarry Smith /*MC 619785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 620d382aafbSBarry Smith 621eca87e8dSBarry Smith Synopsis: 622aaa7dc30SBarry Smith #include <petscsys.h> 623785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 624785e854fSJed Brown 625785e854fSJed Brown Not Collective 626785e854fSJed Brown 627785e854fSJed Brown Input Parameter: 628390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 629785e854fSJed Brown 630785e854fSJed Brown Output Parameter: 6311fe1b817SJunchao Zhang . r1 - memory allocated 632785e854fSJed Brown 633e28ce29aSPatrick Sanan Note: 634e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 635390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 636390e1bf2SBarry Smith $ PetscInt *id; 637390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 638390e1bf2SBarry Smith not 639390e1bf2SBarry Smith $ PetscInt *id; 640390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 641390e1bf2SBarry Smith 6421fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 643390e1bf2SBarry Smith 644390e1bf2SBarry Smith Level: beginner 645785e854fSJed Brown 6461795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 647785e854fSJed Brown 648785e854fSJed Brown M*/ 6492553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 650785e854fSJed Brown 651785e854fSJed Brown /*MC 6521795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6531795a4d1SJed Brown 6541795a4d1SJed Brown Synopsis: 655aaa7dc30SBarry Smith #include <petscsys.h> 6561795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6571795a4d1SJed Brown 6581795a4d1SJed Brown Not Collective 6591795a4d1SJed Brown 6601795a4d1SJed Brown Input Parameter: 6611795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6621795a4d1SJed Brown 6631795a4d1SJed Brown Output Parameter: 6641fe1b817SJunchao Zhang . r1 - memory allocated 6651795a4d1SJed Brown 666e28ce29aSPatrick Sanan Notes: 667e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 668390e1bf2SBarry Smith 669390e1bf2SBarry Smith Level: beginner 6701795a4d1SJed Brown 6711795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6721795a4d1SJed Brown 6731795a4d1SJed Brown M*/ 6742553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 6751795a4d1SJed Brown 6761795a4d1SJed Brown /*MC 677dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 678d382aafbSBarry Smith 679eca87e8dSBarry Smith Synopsis: 680aaa7dc30SBarry Smith #include <petscsys.h> 681dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 682eca87e8dSBarry Smith 683eca87e8dSBarry Smith Not Collective 684eca87e8dSBarry Smith 685d382aafbSBarry Smith Input Parameter: 686d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 687dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 688d382aafbSBarry Smith 689d382aafbSBarry Smith Output Parameter: 690d382aafbSBarry Smith + r1 - memory allocated in first chunk 691d382aafbSBarry Smith - r2 - memory allocated in second chunk 692d382aafbSBarry Smith 693d382aafbSBarry Smith Level: developer 694d382aafbSBarry Smith 6951795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 696d382aafbSBarry Smith 697d382aafbSBarry Smith M*/ 6982553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 699d382aafbSBarry Smith 700d382aafbSBarry Smith /*MC 7011795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 702d382aafbSBarry Smith 703eca87e8dSBarry Smith Synopsis: 704aaa7dc30SBarry Smith #include <petscsys.h> 7051795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 706eca87e8dSBarry Smith 707eca87e8dSBarry Smith Not Collective 708eca87e8dSBarry Smith 709d382aafbSBarry Smith Input Parameter: 710d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7111795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7121795a4d1SJed Brown 7131795a4d1SJed Brown Output Parameter: 7141795a4d1SJed Brown + r1 - memory allocated in first chunk 7151795a4d1SJed Brown - r2 - memory allocated in second chunk 7161795a4d1SJed Brown 7171795a4d1SJed Brown Level: developer 7181795a4d1SJed Brown 7191795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7201795a4d1SJed Brown 7211795a4d1SJed Brown M*/ 7222553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7231795a4d1SJed Brown 7241795a4d1SJed Brown /*MC 725dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 726d382aafbSBarry Smith 727d382aafbSBarry Smith Synopsis: 728aaa7dc30SBarry Smith #include <petscsys.h> 729dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 730d382aafbSBarry Smith 731d382aafbSBarry Smith Not Collective 732d382aafbSBarry Smith 733d382aafbSBarry Smith Input Parameter: 734d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 735d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 736dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 737d382aafbSBarry Smith 738d382aafbSBarry Smith Output Parameter: 739d382aafbSBarry Smith + r1 - memory allocated in first chunk 740d382aafbSBarry Smith . r2 - memory allocated in second chunk 741d382aafbSBarry Smith - r3 - memory allocated in third chunk 742d382aafbSBarry Smith 743d382aafbSBarry Smith Level: developer 744d382aafbSBarry Smith 7451795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 746d382aafbSBarry Smith 747d382aafbSBarry Smith M*/ 7482553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 749d382aafbSBarry Smith 750d382aafbSBarry Smith /*MC 7511795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 752d382aafbSBarry Smith 753eca87e8dSBarry Smith Synopsis: 754aaa7dc30SBarry Smith #include <petscsys.h> 7551795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 756eca87e8dSBarry Smith 757eca87e8dSBarry Smith Not Collective 758eca87e8dSBarry Smith 759d382aafbSBarry Smith Input Parameter: 760d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 761d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7621795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7631795a4d1SJed Brown 7641795a4d1SJed Brown Output Parameter: 7651795a4d1SJed Brown + r1 - memory allocated in first chunk 7661795a4d1SJed Brown . r2 - memory allocated in second chunk 7671795a4d1SJed Brown - r3 - memory allocated in third chunk 7681795a4d1SJed Brown 7691795a4d1SJed Brown Level: developer 7701795a4d1SJed Brown 7711795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7721795a4d1SJed Brown 7731795a4d1SJed Brown M*/ 7742553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 7751795a4d1SJed Brown 7761795a4d1SJed Brown /*MC 777dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 778d382aafbSBarry Smith 779d382aafbSBarry Smith Synopsis: 780aaa7dc30SBarry Smith #include <petscsys.h> 781dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 782d382aafbSBarry Smith 783d382aafbSBarry Smith Not Collective 784d382aafbSBarry Smith 785d382aafbSBarry Smith Input Parameter: 786d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 787d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 788d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 789dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 790d382aafbSBarry Smith 791d382aafbSBarry Smith Output Parameter: 792d382aafbSBarry Smith + r1 - memory allocated in first chunk 793d382aafbSBarry Smith . r2 - memory allocated in second chunk 794d382aafbSBarry Smith . r3 - memory allocated in third chunk 795d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 796d382aafbSBarry Smith 797d382aafbSBarry Smith Level: developer 798d382aafbSBarry Smith 7991795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 800d382aafbSBarry Smith 801d382aafbSBarry Smith M*/ 8022553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 803d382aafbSBarry Smith 804d382aafbSBarry Smith /*MC 8051795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 806d382aafbSBarry Smith 807eca87e8dSBarry Smith Synopsis: 808aaa7dc30SBarry Smith #include <petscsys.h> 8091795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 810eca87e8dSBarry Smith 811eca87e8dSBarry Smith Not Collective 812eca87e8dSBarry Smith 813e28ce29aSPatrick Sanan Input Parameters: 814d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 815d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 816d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8171795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8181795a4d1SJed Brown 819e28ce29aSPatrick Sanan Output Parameters: 8201795a4d1SJed Brown + r1 - memory allocated in first chunk 8211795a4d1SJed Brown . r2 - memory allocated in second chunk 8221795a4d1SJed Brown . r3 - memory allocated in third chunk 8231795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8241795a4d1SJed Brown 8251795a4d1SJed Brown Level: developer 8261795a4d1SJed Brown 8271795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8281795a4d1SJed Brown 8291795a4d1SJed Brown M*/ 8302553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8311795a4d1SJed Brown 8321795a4d1SJed Brown /*MC 833dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 834d382aafbSBarry Smith 835d382aafbSBarry Smith Synopsis: 836aaa7dc30SBarry Smith #include <petscsys.h> 837dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 838d382aafbSBarry Smith 839d382aafbSBarry Smith Not Collective 840d382aafbSBarry Smith 841e28ce29aSPatrick Sanan Input Parameters: 842d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 843d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 844d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 845d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 846dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 847d382aafbSBarry Smith 848e28ce29aSPatrick Sanan Output Parameters: 849d382aafbSBarry Smith + r1 - memory allocated in first chunk 850d382aafbSBarry Smith . r2 - memory allocated in second chunk 851d382aafbSBarry Smith . r3 - memory allocated in third chunk 852d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 853d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 854d382aafbSBarry Smith 855d382aafbSBarry Smith Level: developer 856d382aafbSBarry Smith 8571795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 858d382aafbSBarry Smith 859d382aafbSBarry Smith M*/ 8602553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 861d382aafbSBarry Smith 862d382aafbSBarry Smith /*MC 8631795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 864d382aafbSBarry Smith 865eca87e8dSBarry Smith Synopsis: 866aaa7dc30SBarry Smith #include <petscsys.h> 8671795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 868eca87e8dSBarry Smith 869eca87e8dSBarry Smith Not Collective 870eca87e8dSBarry Smith 871e28ce29aSPatrick Sanan Input Parameters: 872d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 873d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 874d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 875d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 8761795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 8771795a4d1SJed Brown 878e28ce29aSPatrick Sanan Output Parameters: 8791795a4d1SJed Brown + r1 - memory allocated in first chunk 8801795a4d1SJed Brown . r2 - memory allocated in second chunk 8811795a4d1SJed Brown . r3 - memory allocated in third chunk 8821795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8831795a4d1SJed Brown - r5 - memory allocated in fifth chunk 8841795a4d1SJed Brown 8851795a4d1SJed Brown Level: developer 8861795a4d1SJed Brown 8871795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 8881795a4d1SJed Brown 8891795a4d1SJed Brown M*/ 8902553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 891d382aafbSBarry Smith 892d382aafbSBarry Smith /*MC 893dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 894d382aafbSBarry Smith 895d382aafbSBarry Smith Synopsis: 896aaa7dc30SBarry Smith #include <petscsys.h> 897dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 898d382aafbSBarry Smith 899d382aafbSBarry Smith Not Collective 900d382aafbSBarry Smith 901e28ce29aSPatrick Sanan Input Parameters: 902d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 903d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 904d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 905d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 906d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 907dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 908d382aafbSBarry Smith 909e28ce29aSPatrick Sanan Output Parameteasr: 910d382aafbSBarry Smith + r1 - memory allocated in first chunk 911d382aafbSBarry Smith . r2 - memory allocated in second chunk 912d382aafbSBarry Smith . r3 - memory allocated in third chunk 913d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 914d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 915d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 916d382aafbSBarry Smith 917d382aafbSBarry Smith Level: developer 918d382aafbSBarry Smith 9191795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 920d382aafbSBarry Smith 921d382aafbSBarry Smith M*/ 9222553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 923d382aafbSBarry Smith 924d382aafbSBarry Smith /*MC 9251795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 926d382aafbSBarry Smith 927eca87e8dSBarry Smith Synopsis: 928aaa7dc30SBarry Smith #include <petscsys.h> 9291795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 930eca87e8dSBarry Smith 931eca87e8dSBarry Smith Not Collective 932eca87e8dSBarry Smith 933e28ce29aSPatrick Sanan Input Parameters: 934d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 935d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 936d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 937d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 938d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9391795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9401795a4d1SJed Brown 941e28ce29aSPatrick Sanan Output Parameters: 9421795a4d1SJed Brown + r1 - memory allocated in first chunk 9431795a4d1SJed Brown . r2 - memory allocated in second chunk 9441795a4d1SJed Brown . r3 - memory allocated in third chunk 9451795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9461795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9471795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9481795a4d1SJed Brown 9491795a4d1SJed Brown Level: developer 9501795a4d1SJed Brown 9511795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9521795a4d1SJed Brown 9531795a4d1SJed Brown M*/ 9542553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9551795a4d1SJed Brown 9561795a4d1SJed Brown /*MC 957dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 958d382aafbSBarry Smith 959d382aafbSBarry Smith Synopsis: 960aaa7dc30SBarry Smith #include <petscsys.h> 961dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 962d382aafbSBarry Smith 963d382aafbSBarry Smith Not Collective 964d382aafbSBarry Smith 965e28ce29aSPatrick Sanan Input Parameters: 966d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 967d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 968d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 969d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 970d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 971d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 972dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 973d382aafbSBarry Smith 974e28ce29aSPatrick Sanan Output Parameters: 975d382aafbSBarry Smith + r1 - memory allocated in first chunk 976d382aafbSBarry Smith . r2 - memory allocated in second chunk 977d382aafbSBarry Smith . r3 - memory allocated in third chunk 978d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 979d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 980d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 981eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 982d382aafbSBarry Smith 983d382aafbSBarry Smith Level: developer 984d382aafbSBarry Smith 9851795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 986d382aafbSBarry Smith 987d382aafbSBarry Smith M*/ 9882553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 989d382aafbSBarry Smith 990d382aafbSBarry Smith /*MC 9911795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 9921795a4d1SJed Brown 9931795a4d1SJed Brown Synopsis: 994aaa7dc30SBarry Smith #include <petscsys.h> 9951795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 9961795a4d1SJed Brown 9971795a4d1SJed Brown Not Collective 9981795a4d1SJed Brown 999e28ce29aSPatrick Sanan Input Parameters: 10001795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10011795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10021795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10031795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10041795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10051795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10061795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10071795a4d1SJed Brown 1008e28ce29aSPatrick Sanan Output Parameters: 10091795a4d1SJed Brown + r1 - memory allocated in first chunk 10101795a4d1SJed Brown . r2 - memory allocated in second chunk 10111795a4d1SJed Brown . r3 - memory allocated in third chunk 10121795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10131795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10141795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10151795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10161795a4d1SJed Brown 10171795a4d1SJed Brown Level: developer 10181795a4d1SJed Brown 10191795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10201795a4d1SJed Brown 10211795a4d1SJed Brown M*/ 10222553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10231795a4d1SJed Brown 10241795a4d1SJed Brown /*MC 1025503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1026d382aafbSBarry Smith 1027eca87e8dSBarry Smith Synopsis: 1028aaa7dc30SBarry Smith #include <petscsys.h> 1029b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1030eca87e8dSBarry Smith 1031eca87e8dSBarry Smith Not Collective 1032eca87e8dSBarry Smith 1033d382aafbSBarry Smith Output Parameter: 1034b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1035d382aafbSBarry Smith 1036d382aafbSBarry Smith Level: beginner 1037d382aafbSBarry Smith 1038390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1039d382aafbSBarry Smith 1040d382aafbSBarry Smith M*/ 1041b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1042ad0619ddSBarry Smith 1043ad0619ddSBarry Smith /*MC 1044b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1045ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1046ad0619ddSBarry Smith 1047ad0619ddSBarry Smith Synopsis: 1048aaa7dc30SBarry Smith #include <petscsys.h> 1049b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1050ad0619ddSBarry Smith 1051ad0619ddSBarry Smith Not Collective 1052ad0619ddSBarry Smith 1053ad0619ddSBarry Smith Input Parameter: 1054b00a9115SJed Brown . obj - object memory is logged to 1055ad0619ddSBarry Smith 1056ad0619ddSBarry Smith Output Parameter: 1057b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1058ad0619ddSBarry Smith 1059ad0619ddSBarry Smith Level: developer 1060ad0619ddSBarry Smith 1061390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1062ad0619ddSBarry Smith 1063ad0619ddSBarry Smith M*/ 1064d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1065d382aafbSBarry Smith 1066d382aafbSBarry Smith /*MC 1067d382aafbSBarry Smith PetscFree - Frees memory 1068d382aafbSBarry Smith 1069eca87e8dSBarry Smith Synopsis: 1070aaa7dc30SBarry Smith #include <petscsys.h> 1071eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1072eca87e8dSBarry Smith 1073eca87e8dSBarry Smith Not Collective 1074eca87e8dSBarry Smith 1075d382aafbSBarry Smith Input Parameter: 10767f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1077d382aafbSBarry Smith 1078d382aafbSBarry Smith Level: beginner 1079d382aafbSBarry Smith 108049d7da52SJed Brown Notes: 1081390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1082390e1bf2SBarry Smith 108349d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1084d382aafbSBarry Smith 1085390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1086d382aafbSBarry Smith 1087d382aafbSBarry Smith M*/ 1088ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1089d382aafbSBarry Smith 1090d382aafbSBarry Smith /*MC 1091d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1092d382aafbSBarry Smith 1093eca87e8dSBarry Smith Synopsis: 1094aaa7dc30SBarry Smith #include <petscsys.h> 1095eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1096eca87e8dSBarry Smith 1097eca87e8dSBarry Smith Not Collective 1098eca87e8dSBarry Smith 1099e28ce29aSPatrick Sanan Input Parameters: 1100d382aafbSBarry Smith + memory1 - memory to free 1101d382aafbSBarry Smith - memory2 - 2nd memory to free 1102d382aafbSBarry Smith 1103d382aafbSBarry Smith Level: developer 1104d382aafbSBarry Smith 110595452b02SPatrick Sanan Notes: 110695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1107d382aafbSBarry Smith 1108d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1109d382aafbSBarry Smith 1110d382aafbSBarry Smith M*/ 1111ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1112d382aafbSBarry Smith 1113d382aafbSBarry Smith /*MC 1114d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1115d382aafbSBarry Smith 1116eca87e8dSBarry Smith Synopsis: 1117aaa7dc30SBarry Smith #include <petscsys.h> 1118eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1119eca87e8dSBarry Smith 1120eca87e8dSBarry Smith Not Collective 1121eca87e8dSBarry Smith 1122e28ce29aSPatrick Sanan Input Parameters: 1123d382aafbSBarry Smith + memory1 - memory to free 1124d382aafbSBarry Smith . memory2 - 2nd memory to free 1125d382aafbSBarry Smith - memory3 - 3rd memory to free 1126d382aafbSBarry Smith 1127d382aafbSBarry Smith Level: developer 1128d382aafbSBarry Smith 112995452b02SPatrick Sanan Notes: 113095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1131d382aafbSBarry Smith 1132d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1133d382aafbSBarry Smith 1134d382aafbSBarry Smith M*/ 1135ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1136d382aafbSBarry Smith 1137d382aafbSBarry Smith /*MC 1138d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1139d382aafbSBarry Smith 1140eca87e8dSBarry Smith Synopsis: 1141aaa7dc30SBarry Smith #include <petscsys.h> 1142eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1143eca87e8dSBarry Smith 1144eca87e8dSBarry Smith Not Collective 1145eca87e8dSBarry Smith 1146e28ce29aSPatrick Sanan Input Parameters: 1147d382aafbSBarry Smith + m1 - memory to free 1148d382aafbSBarry Smith . m2 - 2nd memory to free 1149d382aafbSBarry Smith . m3 - 3rd memory to free 1150d382aafbSBarry Smith - m4 - 4th memory to free 1151d382aafbSBarry Smith 1152d382aafbSBarry Smith Level: developer 1153d382aafbSBarry Smith 115495452b02SPatrick Sanan Notes: 115595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1156d382aafbSBarry Smith 1157d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1158d382aafbSBarry Smith 1159d382aafbSBarry Smith M*/ 1160ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1161d382aafbSBarry Smith 1162d382aafbSBarry Smith /*MC 1163d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1164d382aafbSBarry Smith 1165eca87e8dSBarry Smith Synopsis: 1166aaa7dc30SBarry Smith #include <petscsys.h> 1167eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1168eca87e8dSBarry Smith 1169eca87e8dSBarry Smith Not Collective 1170eca87e8dSBarry Smith 1171e28ce29aSPatrick Sanan Input Parameters: 1172d382aafbSBarry Smith + m1 - memory to free 1173d382aafbSBarry Smith . m2 - 2nd memory to free 1174d382aafbSBarry Smith . m3 - 3rd memory to free 1175d382aafbSBarry Smith . m4 - 4th memory to free 1176d382aafbSBarry Smith - m5 - 5th memory to free 1177d382aafbSBarry Smith 1178d382aafbSBarry Smith Level: developer 1179d382aafbSBarry Smith 118095452b02SPatrick Sanan Notes: 118195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1182d382aafbSBarry Smith 1183d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1184d382aafbSBarry Smith 1185d382aafbSBarry Smith M*/ 1186ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1187d382aafbSBarry Smith 1188d382aafbSBarry Smith /*MC 1189d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1190d382aafbSBarry Smith 1191eca87e8dSBarry Smith Synopsis: 1192aaa7dc30SBarry Smith #include <petscsys.h> 1193eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1194eca87e8dSBarry Smith 1195eca87e8dSBarry Smith Not Collective 1196eca87e8dSBarry Smith 1197e28ce29aSPatrick Sanan Input Parameters: 1198d382aafbSBarry Smith + m1 - memory to free 1199d382aafbSBarry Smith . m2 - 2nd memory to free 1200d382aafbSBarry Smith . m3 - 3rd memory to free 1201d382aafbSBarry Smith . m4 - 4th memory to free 1202d382aafbSBarry Smith . m5 - 5th memory to free 1203d382aafbSBarry Smith - m6 - 6th memory to free 1204d382aafbSBarry Smith 1205d382aafbSBarry Smith 1206d382aafbSBarry Smith Level: developer 1207d382aafbSBarry Smith 120895452b02SPatrick Sanan Notes: 120995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1210d382aafbSBarry Smith 1211d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1212d382aafbSBarry Smith 1213d382aafbSBarry Smith M*/ 1214ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1215d382aafbSBarry Smith 1216d382aafbSBarry Smith /*MC 1217d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1218d382aafbSBarry Smith 1219eca87e8dSBarry Smith Synopsis: 1220aaa7dc30SBarry Smith #include <petscsys.h> 1221eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1222eca87e8dSBarry Smith 1223eca87e8dSBarry Smith Not Collective 1224eca87e8dSBarry Smith 1225e28ce29aSPatrick Sanan Input Parameters: 1226d382aafbSBarry Smith + m1 - memory to free 1227d382aafbSBarry Smith . m2 - 2nd memory to free 1228d382aafbSBarry Smith . m3 - 3rd memory to free 1229d382aafbSBarry Smith . m4 - 4th memory to free 1230d382aafbSBarry Smith . m5 - 5th memory to free 1231d382aafbSBarry Smith . m6 - 6th memory to free 1232d382aafbSBarry Smith - m7 - 7th memory to free 1233d382aafbSBarry Smith 1234d382aafbSBarry Smith 1235d382aafbSBarry Smith Level: developer 1236d382aafbSBarry Smith 123795452b02SPatrick Sanan Notes: 123895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1239d382aafbSBarry Smith 1240d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1241d382aafbSBarry Smith PetscMalloc7() 1242d382aafbSBarry Smith 1243d382aafbSBarry Smith M*/ 1244ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1245d382aafbSBarry Smith 1246ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1247ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1248071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1249efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12503221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1251ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 125292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1254d382aafbSBarry Smith 1255d382aafbSBarry Smith /* 1256c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1257c1706be6SHong Zhang */ 1258c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1259c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 126031f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 126131f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 126231f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 126331f06eaaSHong Zhang #endif 1264c1706be6SHong Zhang 1265a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 126636763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1267a5057860SBarry Smith 1268a5057860SBarry Smith /* 126966d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1270d382aafbSBarry Smith */ 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 127292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1275e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1276e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 127792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 127892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1279efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 128092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 128192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1282608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1283608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1284d382aafbSBarry Smith 12856a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 12898e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1290d382aafbSBarry Smith 1291d382aafbSBarry Smith /* 1292d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1293d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1294d382aafbSBarry Smith functionality and/or error checking. 1295d382aafbSBarry Smith */ 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1298d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1306a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13102f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13152c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 131847340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13196fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13206991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13216991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1323d382aafbSBarry Smith 1324573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1325573b0fb4SBarry Smith 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1329d382aafbSBarry Smith 1330e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1331a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1332a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1333a53986e1SJed Brown 1334d382aafbSBarry Smith /* 1335d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1336d382aafbSBarry Smith */ 1337367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1338570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1339014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 13402414b3c7SJed Brown #else 13412414b3c7SJed Brown #define MPIU_SUM MPI_SUM 13422414b3c7SJed Brown #endif 1343570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1344014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1345014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1346d9822059SBarry Smith #else 1347d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1348d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1349d9822059SBarry Smith #endif 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1351d382aafbSBarry Smith 1352014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1354eb3f98d2SBarry Smith 135595c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1356d6a4318aSJed Brown 1357639ff905SBarry Smith /* 1358639ff905SBarry Smith Defines PETSc error handling. 1359639ff905SBarry Smith */ 1360639ff905SBarry Smith #include <petscerror.h> 1361d382aafbSBarry Smith 13620700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1363014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1364014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 136681256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 136781256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 136881256985SMatthew G. Knepley 1369d382aafbSBarry Smith 1370d382aafbSBarry Smith /* 1371d382aafbSBarry Smith Routines that get memory usage information from the OS 1372d382aafbSBarry Smith */ 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1376b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1377d382aafbSBarry Smith 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1379d382aafbSBarry Smith 1380d382aafbSBarry Smith /* 1381d382aafbSBarry Smith Initialization of PETSc 1382d382aafbSBarry Smith */ 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1393d382aafbSBarry Smith 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1395607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1396d382aafbSBarry Smith 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1401d382aafbSBarry Smith 1402a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1403a50e088cSMatthew G. Knepley 1404a50e088cSMatthew G. Knepley 1405d382aafbSBarry Smith /* 1406d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14072981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1408d382aafbSBarry Smith */ 1409638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1410638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1411638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1412d382aafbSBarry Smith 1413d382aafbSBarry Smith /* 1414d382aafbSBarry Smith Functions that can act on any PETSc object. 1415d382aafbSBarry Smith */ 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1434bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1435bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14380eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14390eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1441d382aafbSBarry Smith 1442665c2dedSJed Brown #include <petscviewertypes.h> 1443639ff905SBarry Smith #include <petscoptions.h> 1444639ff905SBarry Smith 1445608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1446608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1447608c71bfSMatthew G. Knepley 14480633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14490633abcbSJed Brown 1450639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1451c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1452dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1453639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14540005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14550005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1463685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 14664099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1468b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1471d382aafbSBarry Smith 1472e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 14737aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1474e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1475e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1476e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1477e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1478e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1479e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1480e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1481e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1482e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 148315681b3cSBarry Smith 1484ec7429eaSBarry Smith #else 14857aab2a10SBarry Smith #define PetscSAWsBlock() 0 1486e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1487e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1488e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1489e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1490e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1491e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1492e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1493e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1494e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 149515681b3cSBarry Smith 1496ec7429eaSBarry Smith #endif 1497b90c6cbeSBarry Smith 149882b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 149982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 150082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 15017d5d4d99SBarry Smith 15025fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1503a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15045fe58b6fSBarry Smith #endif 15057eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1506a64a8e02SBarry Smith 1507140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1508140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1509140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1510140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1511140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1512140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1513d382aafbSBarry Smith 1514d382aafbSBarry Smith /* 1515503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1516d382aafbSBarry Smith link libraries that will be loaded as needed. 1517d382aafbSBarry Smith */ 1518a240a19fSJed Brown 1519a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1520a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1521140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15221c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15231c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 152444ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1525140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1526140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1527140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1528d382aafbSBarry Smith 1529014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1537d382aafbSBarry Smith 1538d382aafbSBarry Smith /* 1539d382aafbSBarry Smith Useful utility routines 1540d382aafbSBarry Smith */ 1541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1543d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1546014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1547014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 15486ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 15496ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1550d382aafbSBarry Smith 155164ac3b0dSPatrick Sanan /*MC 1552ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1553503cfb0cSBarry Smith 1554e28ce29aSPatrick Sanan Notes: 1555e28ce29aSPatrick Sanan This is useful in cases like 1556503cfb0cSBarry Smith $ int *a; 1557ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 15581cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 155964ac3b0dSPatrick Sanan 156064ac3b0dSPatrick Sanan Level: beginner 156164ac3b0dSPatrick Sanan 156264ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 156364ac3b0dSPatrick Sanan M*/ 1564d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1565503cfb0cSBarry Smith 1566d382aafbSBarry Smith /*MC 1567d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1568d382aafbSBarry Smith 1569d382aafbSBarry Smith Synopsis: 1570aaa7dc30SBarry Smith #include <petscsys.h> 1571d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1572d382aafbSBarry Smith 1573eca87e8dSBarry Smith Not Collective 1574eca87e8dSBarry Smith 1575d382aafbSBarry Smith Input Parameters: 1576d382aafbSBarry Smith . format - the usual printf() format string 1577d382aafbSBarry Smith 1578d382aafbSBarry Smith Level: developer 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith Fortran Note: 1581d382aafbSBarry Smith This routine is not supported in Fortran. 1582d382aafbSBarry Smith 1583d382aafbSBarry Smith 1584d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1585d382aafbSBarry Smith M*/ 1586014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1587d382aafbSBarry Smith 1588fcfd50ebSBarry Smith /* 1589fcfd50ebSBarry Smith Defines PETSc profiling. 1590fcfd50ebSBarry Smith */ 15912c8e378dSBarry Smith #include <petsclog.h> 1592fcfd50ebSBarry Smith 1593fcfd50ebSBarry Smith /* 1594fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1595fcfd50ebSBarry Smith */ 1596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16031b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1604fcfd50ebSBarry Smith 1605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1608d382aafbSBarry Smith 1609d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1610d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1611d781fa04SBarry Smith 1612d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1614016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 161574ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1616d382aafbSBarry Smith #endif 1617d382aafbSBarry Smith 1618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 16200ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1625d382aafbSBarry Smith 1626014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1632b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1633d382aafbSBarry Smith 1634d382aafbSBarry Smith /* 1635d382aafbSBarry Smith For use in debuggers 1636d382aafbSBarry Smith */ 1637014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1638014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1642d382aafbSBarry Smith 1643a663daf8SBarry Smith #include <stddef.h> 1644a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1645d382aafbSBarry Smith #include <stdlib.h> 16466c7e564aSBarry Smith 16474a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1648d382aafbSBarry Smith #include <xmmintrin.h> 1649d382aafbSBarry Smith #endif 1650d382aafbSBarry Smith 1651d382aafbSBarry Smith /*@C 1652580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1653580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1654580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1655580bdb30SBarry Smith 1656580bdb30SBarry Smith Not Collective 1657580bdb30SBarry Smith 1658580bdb30SBarry Smith Input Parameters: 1659580bdb30SBarry Smith + b - pointer to initial memory space 1660580bdb30SBarry Smith . a - pointer to copy space 1661580bdb30SBarry Smith - n - length (in bytes) of space to copy 1662580bdb30SBarry Smith 1663580bdb30SBarry Smith Level: intermediate 1664580bdb30SBarry Smith 1665580bdb30SBarry Smith Note: 1666857a15f1SBarry Smith PetscArraymove() is preferred 1667580bdb30SBarry Smith This routine is analogous to memmove(). 1668580bdb30SBarry Smith 1669580bdb30SBarry Smith Developers Note: This is inlined for performance 1670580bdb30SBarry Smith 1671580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1672580bdb30SBarry Smith PetscArraymove() 1673580bdb30SBarry Smith @*/ 1674580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1675580bdb30SBarry Smith { 1676580bdb30SBarry Smith PetscFunctionBegin; 1677580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1678580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1679580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1680580bdb30SBarry Smith if (a < b) { 1681580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1682580bdb30SBarry Smith else { 1683580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1684580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1685580bdb30SBarry Smith } 1686580bdb30SBarry Smith } else { 1687580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1688580bdb30SBarry Smith else { 1689580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1690580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1691580bdb30SBarry Smith } 1692580bdb30SBarry Smith } 1693580bdb30SBarry Smith #else 1694580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1695580bdb30SBarry Smith #endif 1696580bdb30SBarry Smith PetscFunctionReturn(0); 1697580bdb30SBarry Smith } 1698580bdb30SBarry Smith 1699d382aafbSBarry Smith /*@C 1700d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1701d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1702d382aafbSBarry Smith PetscMemmove() in that case. 1703d382aafbSBarry Smith 1704d382aafbSBarry Smith Not Collective 1705d382aafbSBarry Smith 1706d382aafbSBarry Smith Input Parameters: 1707d382aafbSBarry Smith + b - pointer to initial memory space 1708d382aafbSBarry Smith - n - length (in bytes) of space to copy 1709d382aafbSBarry Smith 1710d382aafbSBarry Smith Output Parameter: 1711d382aafbSBarry Smith . a - pointer to copy space 1712d382aafbSBarry Smith 1713d382aafbSBarry Smith Level: intermediate 1714d382aafbSBarry Smith 1715d382aafbSBarry Smith Compile Option: 1716d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1717d382aafbSBarry Smith for memory copies on double precision values. 1718d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1719d382aafbSBarry Smith for memory copies on double precision values. 1720d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1721d382aafbSBarry Smith for memory copies on double precision values. 1722d382aafbSBarry Smith 1723d382aafbSBarry Smith Note: 1724580bdb30SBarry Smith Prefer PetscArraycpy() 1725d382aafbSBarry Smith This routine is analogous to memcpy(). 17261fd49c25SBarry Smith Not available from Fortran 17271fd49c25SBarry Smith 1728f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1729f5f57ec0SBarry Smith 1730580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1731d382aafbSBarry Smith 1732d382aafbSBarry Smith @*/ 17337087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1734d382aafbSBarry Smith { 1735d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1736c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1737c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1738a7e36092SMatthew G Knepley PetscFunctionBegin; 1739e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1740e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1741a7e36092SMatthew G Knepley #else 1742d382aafbSBarry Smith PetscFunctionBegin; 1743a7e36092SMatthew G Knepley #endif 1744a47a537aSLisandro Dalcin if (a != b && n > 0) { 1745d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1746e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1747d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1748d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1749d382aafbSBarry Smith #endif 1750d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1751c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1752d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1753d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1754c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1755c5df96a5SBarry Smith PetscErrorCode ierr; 1756c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 17578b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1758d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1759d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1760d382aafbSBarry Smith #else 1761d382aafbSBarry Smith size_t i; 1762d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1763d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1764d382aafbSBarry Smith #endif 1765d382aafbSBarry Smith } else { 1766d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1767d382aafbSBarry Smith } 1768d382aafbSBarry Smith #else 1769d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1770d382aafbSBarry Smith #endif 1771d382aafbSBarry Smith } 1772d382aafbSBarry Smith PetscFunctionReturn(0); 1773d382aafbSBarry Smith } 1774d382aafbSBarry Smith 1775d382aafbSBarry Smith /*@C 1776d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1777d382aafbSBarry Smith 1778d382aafbSBarry Smith Not Collective 1779d382aafbSBarry Smith 1780d382aafbSBarry Smith Input Parameters: 1781d382aafbSBarry Smith + a - pointer to beginning memory location 1782d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1783d382aafbSBarry Smith 1784d382aafbSBarry Smith Level: intermediate 1785d382aafbSBarry Smith 1786d382aafbSBarry Smith Compile Option: 1787d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1788d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1789d382aafbSBarry Smith 17901fd49c25SBarry Smith Not available from Fortran 1791857a15f1SBarry Smith Prefer PetscArrayzero() 17921fd49c25SBarry Smith 1793503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1794503cfb0cSBarry Smith 1795580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1796d382aafbSBarry Smith @*/ 17977087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1798d382aafbSBarry Smith { 1799d382aafbSBarry Smith if (n > 0) { 1800d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 180118703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1802d382aafbSBarry Smith #endif 1803d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1804d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1805d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1806d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1807d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1808d382aafbSBarry Smith } else { 1809d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1810d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1811d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1812d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1813d382aafbSBarry Smith } else { 1814d382aafbSBarry Smith #endif 1815d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1816d382aafbSBarry Smith bzero((char *)a,n); 1817d382aafbSBarry Smith #else 1818d382aafbSBarry Smith memset((char*)a,0,n); 1819d382aafbSBarry Smith #endif 1820d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1821d382aafbSBarry Smith } 1822d382aafbSBarry Smith #endif 1823d382aafbSBarry Smith } 1824d382aafbSBarry Smith return 0; 1825d382aafbSBarry Smith } 1826d382aafbSBarry Smith 1827d382aafbSBarry Smith /*MC 1828580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1829580bdb30SBarry Smith 1830580bdb30SBarry Smith Synopsis: 1831580bdb30SBarry Smith #include <petscsys.h> 1832580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1833580bdb30SBarry Smith 1834580bdb30SBarry Smith Not Collective 1835580bdb30SBarry Smith 1836580bdb30SBarry Smith Input Parameters: 1837580bdb30SBarry Smith + str1 - First array 1838580bdb30SBarry Smith . str2 - Second array 1839580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1840580bdb30SBarry Smith 1841580bdb30SBarry Smith Output Parameters: 1842580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1843580bdb30SBarry Smith 1844580bdb30SBarry Smith Level: intermediate 1845580bdb30SBarry Smith 1846580bdb30SBarry Smith Note: 1847857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1848580bdb30SBarry Smith The arrays must be of the same type 1849580bdb30SBarry Smith 1850580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1851580bdb30SBarry Smith PetscArraymove() 1852580bdb30SBarry Smith M*/ 18539e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1854580bdb30SBarry Smith 18558f8f2f0dSBarry Smith /*MC 1856580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1857580bdb30SBarry Smith do not overlap 1858580bdb30SBarry Smith 1859580bdb30SBarry Smith Synopsis: 1860580bdb30SBarry Smith #include <petscsys.h> 1861580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1862580bdb30SBarry Smith 1863580bdb30SBarry Smith Not Collective 1864580bdb30SBarry Smith 1865580bdb30SBarry Smith Input Parameters: 1866580bdb30SBarry Smith + str1 - First array 1867580bdb30SBarry Smith . str2 - Second array 1868580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1869580bdb30SBarry Smith 1870580bdb30SBarry Smith Level: intermediate 1871580bdb30SBarry Smith 1872580bdb30SBarry Smith Note: 1873857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1874580bdb30SBarry Smith The arrays must be of the same type 1875580bdb30SBarry Smith 1876580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1877580bdb30SBarry Smith M*/ 18789e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1879580bdb30SBarry Smith 18808f8f2f0dSBarry Smith /*MC 1881580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1882580bdb30SBarry Smith 1883580bdb30SBarry Smith Synopsis: 1884580bdb30SBarry Smith #include <petscsys.h> 1885580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1886580bdb30SBarry Smith 1887580bdb30SBarry Smith Not Collective 1888580bdb30SBarry Smith 1889580bdb30SBarry Smith Input Parameters: 1890de25709eSStefano Zampini + str1 - First array (destination) 1891de25709eSStefano Zampini . str2 - Second array (source) 1892580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1893580bdb30SBarry Smith 1894580bdb30SBarry Smith Level: intermediate 1895580bdb30SBarry Smith 1896580bdb30SBarry Smith Note: 1897857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1898580bdb30SBarry Smith The arrays must be of the same type 1899580bdb30SBarry Smith 1900580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1901580bdb30SBarry Smith M*/ 19029e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1903580bdb30SBarry Smith 19048f8f2f0dSBarry Smith /*MC 1905580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1906580bdb30SBarry Smith 1907580bdb30SBarry Smith Synopsis: 1908580bdb30SBarry Smith #include <petscsys.h> 1909580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1910580bdb30SBarry Smith 1911580bdb30SBarry Smith Not Collective 1912580bdb30SBarry Smith 1913580bdb30SBarry Smith Input Parameters: 1914580bdb30SBarry Smith + str1 - array 1915580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1916580bdb30SBarry Smith 1917580bdb30SBarry Smith Level: intermediate 1918580bdb30SBarry Smith 1919580bdb30SBarry Smith Note: 1920857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1921580bdb30SBarry Smith 1922580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1923580bdb30SBarry Smith M*/ 19249e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1925580bdb30SBarry Smith 1926d382aafbSBarry Smith /*MC 1927d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1928d382aafbSBarry Smith 1929eca87e8dSBarry Smith Synopsis: 1930aaa7dc30SBarry Smith #include <petscsys.h> 1931eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1932eca87e8dSBarry Smith 1933d382aafbSBarry Smith Not Collective 1934d382aafbSBarry Smith 1935d382aafbSBarry Smith Input Parameters: 1936d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1937d382aafbSBarry Smith . n - number of elements to fetch 1938d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 193950d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1940d382aafbSBarry Smith 1941d382aafbSBarry Smith Level: developer 1942d382aafbSBarry Smith 1943d382aafbSBarry Smith Notes: 1944d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1945d382aafbSBarry Smith 194650d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 194750d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 194850d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 194963cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 195063cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 195163cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1952d382aafbSBarry Smith 1953d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1954d382aafbSBarry Smith address). 1955d382aafbSBarry Smith 1956d382aafbSBarry Smith M*/ 1957d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1958d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1959d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1960d382aafbSBarry Smith } while (0) 1961d382aafbSBarry Smith 1962d382aafbSBarry Smith /* 1963d382aafbSBarry Smith Determine if some of the kernel computation routines use 1964d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1965d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1966d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1967e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1968d382aafbSBarry Smith */ 1969d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1970d382aafbSBarry Smith 1971d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1972d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1973d382aafbSBarry Smith #endif 1974d382aafbSBarry Smith 19755a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19765a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1977d382aafbSBarry Smith #endif 1978d382aafbSBarry Smith 1979d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1980d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1981d382aafbSBarry Smith #endif 1982d382aafbSBarry Smith 1983d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1984d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1985d382aafbSBarry Smith #endif 1986d382aafbSBarry Smith 1987d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1988d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1989d382aafbSBarry Smith #endif 1990d382aafbSBarry Smith 1991d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1992d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1993d382aafbSBarry Smith #endif 1994d382aafbSBarry Smith 1995d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1996d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1997d382aafbSBarry Smith #endif 1998d382aafbSBarry Smith 1999d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2000d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2001d382aafbSBarry Smith #endif 2002d382aafbSBarry Smith 2003d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2004d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2005d382aafbSBarry Smith #endif 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2008d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2009d382aafbSBarry Smith #endif 2010d382aafbSBarry Smith 2011d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2012d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2013d382aafbSBarry Smith #endif 2014d382aafbSBarry Smith 2015d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2016d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2017d382aafbSBarry Smith #endif 2018d382aafbSBarry Smith 2019d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2020d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2021d382aafbSBarry Smith #endif 2022d382aafbSBarry Smith 2023d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2024d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2025d382aafbSBarry Smith #endif 2026d382aafbSBarry Smith 2027d382aafbSBarry Smith #endif 2028d382aafbSBarry Smith 2029d382aafbSBarry Smith /* 2030d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2031d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2032d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2033d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2034d382aafbSBarry Smith ugly extern "C" {} wrappers. 2035d382aafbSBarry Smith */ 2036d382aafbSBarry Smith #if defined(__cplusplus) 2037d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2038d382aafbSBarry Smith # define EXTERN_C_END } 2039d382aafbSBarry Smith #else 2040d382aafbSBarry Smith # define EXTERN_C_BEGIN 2041d382aafbSBarry Smith # define EXTERN_C_END 2042d382aafbSBarry Smith #endif 2043d382aafbSBarry Smith 2044d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2045d382aafbSBarry Smith 2046d382aafbSBarry Smith /*MC 2047d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2048d382aafbSBarry Smith communication 2049d382aafbSBarry Smith 2050d382aafbSBarry Smith Level: beginner 2051d382aafbSBarry Smith 2052d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2053d382aafbSBarry Smith 2054d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2055d382aafbSBarry Smith M*/ 2056d382aafbSBarry Smith 2057d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2058014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2059014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2060c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2061c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2062c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2063c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2064d382aafbSBarry Smith #endif 2065d382aafbSBarry Smith 2066d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2069d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2070d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2071d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2072d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2073d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2074d382aafbSBarry Smith 207561b0d812SBarry Smith /*@C 2076c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2077c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2078c73702f5SBarry Smith 2079c73702f5SBarry Smith Not Collective 2080c73702f5SBarry Smith 2081c73702f5SBarry Smith Input Parameter: 2082c73702f5SBarry Smith . a - the PetscInt64 value 2083c73702f5SBarry Smith 2084c73702f5SBarry Smith Output Parameter: 2085c73702f5SBarry Smith . b - the resulting PetscInt value 2086c73702f5SBarry Smith 2087c73702f5SBarry Smith Level: advanced 2088c73702f5SBarry Smith 2089c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2090c73702f5SBarry Smith 2091c73702f5SBarry Smith Not available from Fortran 2092c73702f5SBarry Smith 2093c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast() 2094c73702f5SBarry Smith @*/ 2095c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2096c73702f5SBarry Smith { 2097c73702f5SBarry Smith PetscFunctionBegin; 2098c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2099c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2100c73702f5SBarry Smith #endif 2101c73702f5SBarry Smith *b = (PetscInt)(a); 2102c73702f5SBarry Smith PetscFunctionReturn(0); 2103c73702f5SBarry Smith } 2104c73702f5SBarry Smith 2105c73702f5SBarry Smith /*@C 210661b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 210761b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 210861b0d812SBarry Smith 210961b0d812SBarry Smith Not Collective 211061b0d812SBarry Smith 211161b0d812SBarry Smith Input Parameter: 211261b0d812SBarry Smith . a - the PetscInt value 211361b0d812SBarry Smith 211461b0d812SBarry Smith Output Parameter: 211561b0d812SBarry Smith . b - the resulting PetscBLASInt value 211661b0d812SBarry Smith 211761b0d812SBarry Smith Level: advanced 211861b0d812SBarry Smith 21190bc7d38cSBarry Smith Notes: 21201fd49c25SBarry Smith Not available from Fortran 2121f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 21221fd49c25SBarry Smith 2123c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 212461b0d812SBarry Smith @*/ 2125c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2126c5df96a5SBarry Smith { 2127c5df96a5SBarry Smith PetscFunctionBegin; 2128c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 212973f49a0bSSatish Balay *b = 0; 2130c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2131c5df96a5SBarry Smith #endif 21320bc7d38cSBarry Smith if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2133c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2134c5df96a5SBarry Smith PetscFunctionReturn(0); 2135c5df96a5SBarry Smith } 2136c5df96a5SBarry Smith 213761b0d812SBarry Smith /*@C 213861b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 213961b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 214061b0d812SBarry Smith 214161b0d812SBarry Smith Not Collective 214261b0d812SBarry Smith 214361b0d812SBarry Smith Input Parameter: 214461b0d812SBarry Smith . a - the PetscInt value 214561b0d812SBarry Smith 214661b0d812SBarry Smith Output Parameter: 214761b0d812SBarry Smith . b - the resulting PetscMPIInt value 214861b0d812SBarry Smith 214961b0d812SBarry Smith Level: advanced 215061b0d812SBarry Smith 21511fd49c25SBarry Smith Not available from Fortran 21521fd49c25SBarry Smith 2153c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 215461b0d812SBarry Smith @*/ 21554dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 21564dc2109aSBarry Smith { 21574dc2109aSBarry Smith PetscFunctionBegin; 21584dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 215973f49a0bSSatish Balay *b = 0; 21604dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 21614dc2109aSBarry Smith #endif 2162c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21634dc2109aSBarry Smith PetscFunctionReturn(0); 21644dc2109aSBarry Smith } 21654dc2109aSBarry Smith 2166bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 21672f18eb33SBarry Smith 21682f18eb33SBarry Smith /*@C 21692f18eb33SBarry Smith 21702f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 21712f18eb33SBarry Smith 21722f18eb33SBarry Smith Not Collective 21732f18eb33SBarry Smith 21742f18eb33SBarry Smith Input Parameter: 21752f18eb33SBarry Smith + a - the PetscReal value 21762f18eb33SBarry Smith - b - the second value 21772f18eb33SBarry Smith 2178390e1bf2SBarry Smith Returns: 2179390e1bf2SBarry Smith the result as a PetscInt value 21802f18eb33SBarry Smith 2181bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21822f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 21832f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21842f18eb33SBarry Smith 2185e28ce29aSPatrick Sanan Developers Note: 2186e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21872f18eb33SBarry Smith 21882f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21892f18eb33SBarry Smith 21901fd49c25SBarry Smith Not available from Fortran 21911fd49c25SBarry Smith 21922f18eb33SBarry Smith Level: advanced 21932f18eb33SBarry Smith 2194390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 21952f18eb33SBarry Smith @*/ 21962f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 21972f18eb33SBarry Smith { 2198bafee8b4SSatish Balay PetscInt64 r; 21992f18eb33SBarry Smith 2200bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 22012f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22022f18eb33SBarry Smith return (PetscInt) r; 22032f18eb33SBarry Smith } 22042f18eb33SBarry Smith 22052f18eb33SBarry Smith /*@C 22062f18eb33SBarry Smith 22072f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 22082f18eb33SBarry Smith 22092f18eb33SBarry Smith Not Collective 22102f18eb33SBarry Smith 22112f18eb33SBarry Smith Input Parameter: 22122f18eb33SBarry Smith + a - the PetscInt value 22132f18eb33SBarry Smith - b - the second value 22142f18eb33SBarry Smith 2215390e1bf2SBarry Smith Returns: 2216390e1bf2SBarry Smith the result as a PetscInt value 22172f18eb33SBarry Smith 2218bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22192f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 22202f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22212f18eb33SBarry Smith 22221fd49c25SBarry Smith Not available from Fortran 22231fd49c25SBarry Smith 22242f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22252f18eb33SBarry Smith 22262f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22272f18eb33SBarry Smith 22282f18eb33SBarry Smith Level: advanced 22292f18eb33SBarry Smith 2230390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 22312f18eb33SBarry Smith @*/ 22322f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 22332f18eb33SBarry Smith { 2234bafee8b4SSatish Balay PetscInt64 r; 22352f18eb33SBarry Smith 2236bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22372f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22382f18eb33SBarry Smith return (PetscInt) r; 22392f18eb33SBarry Smith } 22402f18eb33SBarry Smith 2241f91af8c7SBarry Smith /*@C 2242f91af8c7SBarry Smith 2243f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2244f91af8c7SBarry Smith 2245f91af8c7SBarry Smith Not Collective 2246f91af8c7SBarry Smith 2247f91af8c7SBarry Smith Input Parameter: 2248f91af8c7SBarry Smith + a - the PetscInt value 2249f91af8c7SBarry Smith - b - the second value 2250f91af8c7SBarry Smith 2251390e1bf2SBarry Smith Returns: 2252390e1bf2SBarry Smith the result as a PetscInt value 2253f91af8c7SBarry Smith 2254bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2255f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2256f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2257f91af8c7SBarry Smith 2258f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2259f91af8c7SBarry Smith 2260f5f57ec0SBarry Smith Not available from Fortran 2261f5f57ec0SBarry Smith 2262f91af8c7SBarry Smith Level: advanced 2263f91af8c7SBarry Smith 2264390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2265f91af8c7SBarry Smith @*/ 2266f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2267f91af8c7SBarry Smith { 2268bafee8b4SSatish Balay PetscInt64 r; 2269f91af8c7SBarry Smith 2270bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2271f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2272f91af8c7SBarry Smith return (PetscInt) r; 2273f91af8c7SBarry Smith } 2274f91af8c7SBarry Smith 22752f18eb33SBarry Smith /*@C 22762f18eb33SBarry Smith 22772f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 22782f18eb33SBarry Smith 22792f18eb33SBarry Smith Not Collective 22802f18eb33SBarry Smith 22812f18eb33SBarry Smith Input Parameter: 22822f18eb33SBarry Smith + a - the PetscInt value 22832f18eb33SBarry Smith - b - the second value 22842f18eb33SBarry Smith 22852f18eb33SBarry Smith Output Parameter:ma 2286390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 22872f18eb33SBarry Smith 2288bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 22892f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 22902f18eb33SBarry Smith 2291f5f57ec0SBarry Smith Not available from Fortran 2292f5f57ec0SBarry Smith 2293220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 22942f18eb33SBarry Smith 22952f18eb33SBarry Smith Level: advanced 22962f18eb33SBarry Smith 2297220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 22982f18eb33SBarry Smith @*/ 22992f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 23002f18eb33SBarry Smith { 2301bafee8b4SSatish Balay PetscInt64 r; 23022f18eb33SBarry Smith 23032f18eb33SBarry Smith PetscFunctionBegin; 2304bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23052f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 23062f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 23072f18eb33SBarry Smith #endif 2308f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2309f91af8c7SBarry Smith PetscFunctionReturn(0); 2310f91af8c7SBarry Smith } 2311f91af8c7SBarry Smith 2312f91af8c7SBarry Smith /*@C 2313f91af8c7SBarry Smith 2314fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2315f91af8c7SBarry Smith 2316f91af8c7SBarry Smith Not Collective 2317f91af8c7SBarry Smith 2318f91af8c7SBarry Smith Input Parameter: 2319f91af8c7SBarry Smith + a - the PetscInt value 2320f91af8c7SBarry Smith - b - the second value 2321f91af8c7SBarry Smith 2322f91af8c7SBarry Smith Output Parameter:ma 2323390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2324f91af8c7SBarry Smith 2325bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2326f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2327f91af8c7SBarry Smith 2328f5f57ec0SBarry Smith Not available from Fortran 2329f5f57ec0SBarry Smith 2330f91af8c7SBarry Smith Level: advanced 2331f91af8c7SBarry Smith 2332390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2333f91af8c7SBarry Smith @*/ 2334f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2335f91af8c7SBarry Smith { 2336bafee8b4SSatish Balay PetscInt64 r; 2337f91af8c7SBarry Smith 2338f91af8c7SBarry Smith PetscFunctionBegin; 2339bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2340f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2341f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2342f91af8c7SBarry Smith #endif 2343f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 23442f18eb33SBarry Smith PetscFunctionReturn(0); 23452f18eb33SBarry Smith } 2346c5df96a5SBarry Smith 2347d382aafbSBarry Smith /* 23482981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2349d382aafbSBarry Smith */ 2350d382aafbSBarry Smith #if defined(hz) 2351d382aafbSBarry Smith # undef hz 2352d382aafbSBarry Smith #endif 2353d382aafbSBarry Smith 235415a5570dSLisandro Dalcin #include <limits.h> 235515a5570dSLisandro Dalcin 235615a5570dSLisandro Dalcin /* The number of bits in a byte */ 235715a5570dSLisandro Dalcin 235815a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 235915a5570dSLisandro Dalcin 2360d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2361d382aafbSBarry Smith # include <sys/types.h> 2362d382aafbSBarry Smith #endif 2363d382aafbSBarry Smith 2364d382aafbSBarry Smith /*MC 2365d382aafbSBarry Smith 236666d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 236766d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 236866d79e26SBarry Smith 236966d79e26SBarry Smith 237066d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 237166d79e26SBarry Smith 237266d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 237366d79e26SBarry Smith 237466d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 237566d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 237666d79e26SBarry Smith 237766d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 237866d79e26SBarry Smith 237966d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 238066d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 238166d79e26SBarry Smith version number (x.y.z). 238266d79e26SBarry Smith 238366d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 238466d79e26SBarry Smith 238566d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 238666d79e26SBarry Smith 238766d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 238866d79e26SBarry Smith 238966d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 239066d79e26SBarry Smith 239166d79e26SBarry Smith Level: intermediate 239266d79e26SBarry Smith 239366d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 239466d79e26SBarry Smith 239566d79e26SBarry Smith M*/ 239666d79e26SBarry Smith 239766d79e26SBarry Smith /*MC 239866d79e26SBarry Smith 23991b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 24001b266c99SBarry Smith of every function and module definition you need something like 2401d382aafbSBarry Smith 2402d382aafbSBarry Smith $ 2403af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 24040f665fc7SPatrick Sanan $ use petscXXX 24051b266c99SBarry Smith 2406692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 24071b266c99SBarry Smith 2408d382aafbSBarry Smith $ XXX variablename 24091b266c99SBarry Smith $ type(tXXX) variablename 24101b266c99SBarry Smith 2411692afcd8SPatrick Sanan For example, 24121b266c99SBarry Smith 2413bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 24141b266c99SBarry Smith $ use petscvec 2415d382aafbSBarry Smith $ 2416692afcd8SPatrick Sanan $ Vec b 2417692afcd8SPatrick Sanan $ type(tVec) x 2418d382aafbSBarry Smith 2419d382aafbSBarry Smith Level: beginner 2420d382aafbSBarry Smith 2421d382aafbSBarry Smith M*/ 2422d382aafbSBarry Smith 2423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 242927710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24305f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2431d382aafbSBarry Smith 24326a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24336a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24346a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2436ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 243722ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2439f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 244060e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2441d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 24456c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 244617d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 244717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 24495569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 245117df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 245339f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2455745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 245639f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 24606c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 24616c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2462e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2463ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2464ce605777SToby Isaac 24654d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2466676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2467676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2468676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 24694d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2470676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2471676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2472676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2473676f2a66SJacob Faibussowitsch 2474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2476d382aafbSBarry Smith 247776bdecfbSBarry Smith /*J 2478d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2479d382aafbSBarry Smith 2480d382aafbSBarry Smith Level: beginner 2481d382aafbSBarry Smith 2482e28ce29aSPatrick Sanan Notes: 2483e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 248425ccb61fSToby Isaac with the option --download-sprng or --download-random123 2485d382aafbSBarry Smith 24868f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 248776bdecfbSBarry Smith J*/ 248819fd82e9SBarry Smith typedef const char* PetscRandomType; 2489d382aafbSBarry Smith #define PETSCRAND "rand" 2490d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2491d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2492c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 249325ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2494d382aafbSBarry Smith 2495d382aafbSBarry Smith /* Logging support */ 2496014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2497d382aafbSBarry Smith 2498607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2499d382aafbSBarry Smith 2500d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2501140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2502d382aafbSBarry Smith 2503bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 250419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 250619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2507fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2509d382aafbSBarry Smith 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2519d382aafbSBarry Smith 2520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 252797540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 25288a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 252997540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2530d382aafbSBarry Smith 253130815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 253230815ce0SLisandro Dalcin 25339860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 25349860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2535f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2536f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2544c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2545e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2546c891a504SStefano Zampini #endif 2547d382aafbSBarry Smith 2548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2551d382aafbSBarry Smith 2552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2554014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2555014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 25582a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2559d382aafbSBarry Smith 2560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2561014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2562014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2563014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2565cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2566cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2567d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2568d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2569d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2570d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 25716afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 25726afbe7ddSJed Brown MPI_Request**,MPI_Request**, 25736afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 25746afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 25756afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2576d382aafbSBarry Smith 25776145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 25786145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 25796145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 25806145cd65SJed Brown 2581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2582d382aafbSBarry Smith 2583ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2584ce94432eSBarry Smith 258545487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 258645487dadSJed Brown 2587d382aafbSBarry Smith struct _n_PetscSubcomm { 2588d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2589d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2590306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 259145487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 259245487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2593708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 259445487dadSJed Brown PetscSubcommType type; 2595e5acf8a4SHong Zhang char *subcommprefix; 2596d382aafbSBarry Smith }; 2597d382aafbSBarry Smith 2598c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2599306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 260036be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 260565d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2606053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2607f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2608e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2609a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2610a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2611a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2612d382aafbSBarry Smith 26139962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 26149962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 26159962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 26169962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 26179962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 26189962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 26199962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 26209962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 26219962606eSBarry Smith 26225e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 26235f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 26245f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26255f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26265f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 26275e71baefSBarry Smith 2628a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2629a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2630a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2631a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2632a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2633a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2634a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2635a32e93adSJunchao Zhang 263613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 26370f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 263813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2639137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2640137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2641137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 264213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 264313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 26440f453b92SJed Brown 26455e71baefSBarry Smith 2646471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2647471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2648471ecdacSJed Brown * possible. */ 26496a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2650d382aafbSBarry Smith 26519de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 26529de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 26539de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 26549de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 26559de0f6ecSBarry Smith 2656ace2fbaeSBarry Smith #include <stdarg.h> 2657ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2658ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2659ace2fbaeSBarry Smith 2660268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2661fbfcfee5SBarry Smith 26621f817a21SBarry Smith /*@C 26631f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26641f817a21SBarry Smith 26651f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 26661f817a21SBarry Smith 26671f817a21SBarry Smith Input Parameters: 26681f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 26691f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 26701f817a21SBarry Smith 2671850545d0SSatish Balay Level: intermediate 2672850545d0SSatish Balay 2673f5f57ec0SBarry Smith Not available from Fortran 2674f5f57ec0SBarry Smith 26751f817a21SBarry Smith Options Database: 2676063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 26771f817a21SBarry Smith @*/ 2678dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2679dff31646SBarry Smith { 2680dff31646SBarry Smith size_t len; 2681dff31646SBarry Smith char *vstring; 2682dff31646SBarry Smith PetscErrorCode ierr; 2683dff31646SBarry Smith 26841f817a21SBarry Smith PetscFunctionBegin; 26858d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2686dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 268735005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2688580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2689dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26901f817a21SBarry Smith PetscFunctionReturn(0); 2691dff31646SBarry Smith } 2692dff31646SBarry Smith 2693b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2694fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2695fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2696f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2697fe278a28SBarry Smith 2698f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2699f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2700b967cddfSBarry Smith 27019f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27029f4d3c52SBarry Smith 270304102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2704763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2705dff31646SBarry Smith 270668e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27075dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2708d382aafbSBarry Smith 2709b2566f29SBarry Smith 2710b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2711b2566f29SBarry Smith /* 2712b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2713b2566f29SBarry Smith */ 27148f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 271577a5e07dSBarry Smith 271677a5e07dSBarry Smith /*MC 271777a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 271877a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 271977a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 272077a5e07dSBarry Smith 2721d083f849SBarry Smith Collective 272277a5e07dSBarry Smith 272377a5e07dSBarry Smith Synopsis: 272477a5e07dSBarry Smith #include <petscsys.h> 272577a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 272677a5e07dSBarry Smith 272777a5e07dSBarry Smith Input Parameters: 272877a5e07dSBarry Smith + indata - pointer to the input data to be reduced 272977a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 273077a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 273177a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 273277a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 273377a5e07dSBarry Smith 273477a5e07dSBarry Smith Output Parameter: 273577a5e07dSBarry Smith . outdata - the reduced values 273677a5e07dSBarry Smith 2737e28ce29aSPatrick Sanan Notes: 2738e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 273977a5e07dSBarry Smith 274077a5e07dSBarry Smith Level: developer 274177a5e07dSBarry Smith 274277a5e07dSBarry Smith .seealso: MPI_Allreduce() 274377a5e07dSBarry Smith M*/ 2744fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2745b2566f29SBarry Smith #else 2746b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2747b2566f29SBarry Smith #endif 2748b2566f29SBarry Smith 2749b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 27508198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 27518198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 27522f065d89SBarry Smith #endif 27538198064fSBarry Smith 275412801b39SBarry Smith /* 275512801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 275612801b39SBarry Smith */ 27578ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 27588ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 275912801b39SBarry Smith 2760d382aafbSBarry Smith #endif 2761