xref: /petsc/include/petscsys.h (revision 613bf2b20e6d15d382f10220b3a3e6e72f647221)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
526bd1501SBarry Smith #if !defined(PETSCSYS_H)
626bd1501SBarry Smith #define PETSCSYS_H
73ca90d2dSJacob Faibussowitsch 
8d382aafbSBarry Smith /* ========================================================================== */
9d382aafbSBarry Smith /*
10d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
111c77a0c5SBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that
121c77a0c5SBarry Smith    PETSc's makefiles add to the compiler rules.
131c77a0c5SBarry Smith    For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same
141cc8b206SBarry Smith    directory as the other PETSc include files.
15d382aafbSBarry Smith */
162c8e378dSBarry Smith #include <petscconf.h>
171c77a0c5SBarry Smith #include <petscconf_poison.h>
182c8e378dSBarry Smith #include <petscfix.h>
19bde483f2SJacob Faibussowitsch #include <petscmacros.h>
2033bb201bSJacob Faibussowitsch 
21ac09b921SBarry Smith /* SUBMANSEC = Sys */
22ac09b921SBarry Smith 
2373fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
2473fca5a0SBarry Smith /*
2573fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2673fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2773fca5a0SBarry Smith */
28216f1ae6SBarry Smith #  if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2973fca5a0SBarry Smith #    define _POSIX_C_SOURCE 200112L
3073fca5a0SBarry Smith #  endif
31216f1ae6SBarry Smith #  if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
3273fca5a0SBarry Smith #    define _BSD_SOURCE
3373fca5a0SBarry Smith #  endif
3407f00807SSatish Balay #  if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE)
3507f00807SSatish Balay #    define _DEFAULT_SOURCE
3607f00807SSatish Balay #  endif
37ea0fecefSShri Abhyankar #  if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
38ea0fecefSShri Abhyankar #    define _GNU_SOURCE
39ea0fecefSShri Abhyankar #  endif
4073fca5a0SBarry Smith #endif
4173fca5a0SBarry Smith 
42df4397b0SStefano Zampini #include <petscsystypes.h>
43df4397b0SStefano Zampini 
44d382aafbSBarry Smith /* ========================================================================== */
45d382aafbSBarry Smith 
46d382aafbSBarry Smith /*
47d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
48d382aafbSBarry Smith 
49d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
50d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
51d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
52d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
53d382aafbSBarry Smith     mpicxx.h directly in their code
54d382aafbSBarry Smith */
55fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX)
56d382aafbSBarry Smith #  define MPICH_SKIP_MPICXX 1
57fa9e63e2SJed Brown #endif
58fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX)
59d382aafbSBarry Smith #  define OMPI_SKIP_MPICXX 1
60fa9e63e2SJed Brown #endif
61e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI)
62e771154cSJed Brown #  include <petsc/mpiuni/mpi.h>
63e771154cSJed Brown #else
642c8e378dSBarry Smith #  include <mpi.h>
65e771154cSJed Brown #endif
6665013866SBarry Smith 
67d382aafbSBarry Smith /*
68a7886beaSBarry Smith    Perform various sanity checks that the correct mpi.h is being included at compile time.
69a7886beaSBarry Smith    This usually happens because
70a7886beaSBarry Smith       * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or
71a7886beaSBarry Smith       * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler
72a7886beaSBarry Smith */
73a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI)
74c9b973beSBarry Smith #  if !defined(MPIUNI_H)
75a7886beaSBarry Smith #    error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h"
76a7886beaSBarry Smith #  endif
7741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION)
7841f4af4cSSatish Balay #  if !defined(I_MPI_NUMVERSION)
7941f4af4cSSatish Balay #    error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h"
8041f4af4cSSatish Balay #  elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION
8141f4af4cSSatish Balay #    error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version"
8241f4af4cSSatish Balay #  endif
8341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION)
8441f4af4cSSatish Balay #  if !defined(MVAPICH2_NUMVERSION)
8541f4af4cSSatish Balay #    error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h"
8641f4af4cSSatish Balay #  elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION
8741f4af4cSSatish Balay #    error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version"
8841f4af4cSSatish Balay #  endif
89a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION)
9041f4af4cSSatish Balay #  if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION)
91a7886beaSBarry Smith #    error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h"
921c284764SMin RK #  elif (MPICH_NUMVERSION/100000000 != PETSC_HAVE_MPICH_NUMVERSION/100000000) || (MPICH_NUMVERSION/100000 < PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION/100000 == PETSC_HAVE_MPICH_NUMVERSION/100000 && MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000)
93a7886beaSBarry Smith #    error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version"
94a7886beaSBarry Smith #  endif
95a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION)
96a7886beaSBarry Smith #  if !defined(OMPI_MAJOR_VERSION)
97a7886beaSBarry Smith #    error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h"
981c284764SMin RK #  elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION < PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_MINOR_VERSION == PETSC_HAVE_OMPI_MINOR_VERSION && OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION)
99c3ac57cfSSatish Balay #    error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version"
100a7886beaSBarry Smith #  endif
101c93fae50SJacob Faibussowitsch #  define PETSC_MPI_COMM_FMT "p"
102c93fae50SJacob Faibussowitsch #  define PETSC_MPI_WIN_FMT  "p"
103d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION)
104d97fd468SStefano Zampini #  if !defined(MSMPI_VER)
105d97fd468SStefano Zampini #    error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h"
106d97fd468SStefano Zampini #  elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION)
107d97fd468SStefano Zampini #    error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version"
108d97fd468SStefano Zampini #  endif
109d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER)
110d97fd468SStefano Zampini #  error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant"
111a7886beaSBarry Smith #endif
112a7886beaSBarry Smith 
113c93fae50SJacob Faibussowitsch /* Format specifier for printing MPI_Comm (most implementations use 'int' as type) */
114c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_COMM_FMT)
115c93fae50SJacob Faibussowitsch #  define PETSC_MPI_COMM_FMT "d"
116c93fae50SJacob Faibussowitsch #endif
117c93fae50SJacob Faibussowitsch 
118c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_WIN_FMT)
119c93fae50SJacob Faibussowitsch #  define PETSC_MPI_WIN_FMT "d"
120c93fae50SJacob Faibussowitsch #endif
121c93fae50SJacob Faibussowitsch 
122a7886beaSBarry Smith /*
1232981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
124d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
125d382aafbSBarry Smith */
126d382aafbSBarry Smith #include <stdio.h>
127d382aafbSBarry Smith 
128d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
129d382aafbSBarry Smith #if !defined(MPIAPI)
130d382aafbSBarry Smith #define MPIAPI
131d382aafbSBarry Smith #endif
132d382aafbSBarry Smith 
1331cc8b206SBarry Smith /*
1341cc8b206SBarry Smith    Support for Clang (>=3.2) matching type tag arguments with void* buffer types.
1351cc8b206SBarry Smith    This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine
1361cc8b206SBarry Smith    does not match the actual type of the argument being passed in
1371cc8b206SBarry Smith */
138c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true)
139894dd566SJed Brown #  if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype)
140894dd566SJed Brown #    define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno)))
1418ad47952SJed Brown #    define PetscAttrMPITypeTag(type)                 __attribute__((type_tag_for_datatype(MPI,type)))
1428ad47952SJed Brown #    define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible)))
143894dd566SJed Brown #  endif
144894dd566SJed Brown #endif
145894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType)
146894dd566SJed Brown #  define PetscAttrMPIPointerWithType(bufno,typeno)
1478ad47952SJed Brown #  define PetscAttrMPITypeTag(type)
1488ad47952SJed Brown #  define PetscAttrMPITypeTagLayoutCompatible(type)
149894dd566SJed Brown #endif
150b3506946SBarry Smith 
1515a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum);
152df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool);
153e28ce29aSPatrick Sanan 
154e28ce29aSPatrick Sanan /*MC
15587497f52SBarry Smith    MPIU_INT - Portable MPI datatype corresponding to `PetscInt` independent of the precision of `PetscInt`
156e28ce29aSPatrick Sanan 
157e28ce29aSPatrick Sanan    Notes:
15887497f52SBarry Smith    In MPI calls that require an MPI datatype that matches a `PetscInt` or array of `PetscInt` values, pass this value.
159e28ce29aSPatrick Sanan 
160e28ce29aSPatrick Sanan    Level: beginner
161e28ce29aSPatrick Sanan 
162db781477SPatrick Sanan .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX`
163e28ce29aSPatrick Sanan M*/
164e28ce29aSPatrick Sanan 
1657cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR;
166b7b8f77aSBarry Smith 
167d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
168bd84f1cfSSatish Balay #  define MPIU_INT MPIU_INT64
169a05e1a72SSatish Balay #  define PetscInt_FMT PetscInt64_FMT
170d382aafbSBarry Smith #else
171d382aafbSBarry Smith #  define MPIU_INT MPI_INT
172a05e1a72SSatish Balay #  define PetscInt_FMT "d"
173d382aafbSBarry Smith #endif
174d382aafbSBarry Smith 
175503cfb0cSBarry Smith /*
176503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
177503cfb0cSBarry Smith */
178e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T;
179d382aafbSBarry Smith 
180d382aafbSBarry Smith /*
181d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
182d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
183d382aafbSBarry Smith */
184014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT;
185d382aafbSBarry Smith 
186d382aafbSBarry Smith /*
187d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
188d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
189d382aafbSBarry Smith */
190014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR;
191d382aafbSBarry Smith 
192c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */
193c8b9133aSSatish Balay 
1945c993f7fSStefano Zampini #if defined(__NEC__)
1955c993f7fSStefano Zampini #  define PetscPragmaSIMD _Pragma("_NEC ivdep")
1965c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32)
197c8b9133aSSatish Balay #  define PetscPragmaSIMD _Pragma("vector")
1981dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI)
199c8b9133aSSatish Balay #  define PetscPragmaSIMD _Pragma("GCC ivdep")
200e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307
201e5518150SSatish Balay #  if defined(_MSC_VER)
202160a5775SAli Reza Khaz'ali #    define PetscPragmaSIMD __pragma(omp simd)
203e5518150SSatish Balay #  else
204e5518150SSatish Balay #    define PetscPragmaSIMD _Pragma("omp simd")
205e5518150SSatish Balay #  endif
206c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR)
207c8b9133aSSatish Balay #  define PetscPragmaSIMD _Pragma("_CRI ivdep")
208c8b9133aSSatish Balay #else
209c8b9133aSSatish Balay #  define PetscPragmaSIMD
210c8b9133aSSatish Balay #endif
211c8b9133aSSatish Balay 
212d382aafbSBarry Smith /*
213d382aafbSBarry Smith     Declare extern C stuff after including external header files
214d382aafbSBarry Smith */
215d382aafbSBarry Smith 
2166a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[];
21770b3c8c7SBarry Smith 
2186edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND;
2198b49ba18SBarry Smith /*
220390e1bf2SBarry Smith     Defines elementary mathematics functions and constants.
2218b49ba18SBarry Smith */
2228b49ba18SBarry Smith #include <petscmath.h>
2238b49ba18SBarry Smith 
2246a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[];
225d382aafbSBarry Smith 
226d382aafbSBarry Smith /*MC
2270298fd71SBarry Smith     PETSC_IGNORE - same as NULL, means PETSc will ignore this argument
228d382aafbSBarry Smith 
229d382aafbSBarry Smith    Level: beginner
230d382aafbSBarry Smith 
231e28ce29aSPatrick Sanan    Note:
23287497f52SBarry Smith    Accepted by many PETSc functions to not set a parameter and instead use some default
233d382aafbSBarry Smith 
23487497f52SBarry Smith    Fortran Note:
23587497f52SBarry Smith    This macro does not exist in Fortran; you must use `PETSC_NULL_INTEGER`, `PETSC_NULL_DOUBLE_PRECISION` etc
236d382aafbSBarry Smith 
237db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_DETERMINE`
238d382aafbSBarry Smith 
239d382aafbSBarry Smith M*/
2400298fd71SBarry Smith #define PETSC_IGNORE NULL
241d382aafbSBarry Smith 
242c528d872SBarry Smith /* This is deprecated */
243c528d872SBarry Smith #define PETSC_NULL NULL
244c528d872SBarry Smith 
245d382aafbSBarry Smith /*MC
246557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
247557d4da8SBarry Smith        where you wish PETSc to use the default.
248557d4da8SBarry Smith 
249557d4da8SBarry Smith    Level: beginner
250557d4da8SBarry Smith 
251db781477SPatrick Sanan .seealso: `PETSC_DEFAULT`, `PETSC_IGNORE`, `PETSC_DETERMINE`
252557d4da8SBarry Smith 
253557d4da8SBarry Smith M*/
254557d4da8SBarry Smith #define PETSC_DECIDE -1
255557d4da8SBarry Smith 
256557d4da8SBarry Smith /*MC
257d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
258d382aafbSBarry Smith        where you wish PETSc to compute the required value.
259d382aafbSBarry Smith 
260d382aafbSBarry Smith    Level: beginner
261d382aafbSBarry Smith 
262e28ce29aSPatrick Sanan    Developer Note:
26387497f52SBarry Smith    I would like to use const `PetscInt` `PETSC_DETERMINE` = `PETSC_DECIDE`; but for
26487497f52SBarry Smith      some reason this is not allowed by the standard even though `PETSC_DECIDE` is a constant value.
265557d4da8SBarry Smith 
266db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_IGNORE`, `VecSetSizes()`
267d382aafbSBarry Smith 
268d382aafbSBarry Smith M*/
269d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
270d382aafbSBarry Smith 
271d382aafbSBarry Smith /*MC
272557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
273557d4da8SBarry Smith        where you wish PETSc to use the default.
274557d4da8SBarry Smith 
275557d4da8SBarry Smith    Level: beginner
276557d4da8SBarry Smith 
27787497f52SBarry Smith    Fortran Note:
27887497f52SBarry Smith    You need to use `PETSC_DEFAULT_INTEGER` or `PETSC_DEFAULT_REAL`.
279557d4da8SBarry Smith 
280db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_IGNORE`, `PETSC_DETERMINE`
281557d4da8SBarry Smith 
282557d4da8SBarry Smith M*/
283557d4da8SBarry Smith #define PETSC_DEFAULT -2
284557d4da8SBarry Smith 
285557d4da8SBarry Smith /*MC
28687497f52SBarry Smith     PETSC_COMM_WORLD - the equivalent of the `MPI_COMM_WORLD` communicator which represents
287ea8fe74dSBarry Smith            all the processes that PETSc knows about.
288d382aafbSBarry Smith 
289d382aafbSBarry Smith    Level: beginner
290d382aafbSBarry Smith 
291e28ce29aSPatrick Sanan    Notes:
29287497f52SBarry Smith    By default `PETSC_COMM_WORLD` and `MPI_COMM_WORLD` are identical unless you wish to
29387497f52SBarry Smith           run PETSc on ONLY a subset of `MPI_COMM_WORLD`. In that case create your new (smaller)
29487497f52SBarry Smith           communicator, call it, say comm, and set `PETSC_COMM_WORLD` = comm BEFORE calling
29587497f52SBarry Smith           PetscInitialize(), but after `MPI_Init()` has been called.
296a990b902SBarry Smith 
29787497f52SBarry Smith           The value of `PETSC_COMM_WORLD` should never be USED/accessed before `PetscInitialize()`
298a990b902SBarry Smith           is called because it may not have a valid value yet.
299d382aafbSBarry Smith 
300db781477SPatrick Sanan .seealso: `PETSC_COMM_SELF`
301d382aafbSBarry Smith 
302d382aafbSBarry Smith M*/
303014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
304d382aafbSBarry Smith 
305d382aafbSBarry Smith /*MC
30687497f52SBarry Smith     PETSC_COMM_SELF - This is always `MPI_COMM_SELF`
307d382aafbSBarry Smith 
308d382aafbSBarry Smith    Level: beginner
309d382aafbSBarry Smith 
310e28ce29aSPatrick Sanan    Notes:
311e28ce29aSPatrick Sanan    Do not USE/access or set this variable before PetscInitialize() has been called.
312a990b902SBarry Smith 
313db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`
314d382aafbSBarry Smith 
315d382aafbSBarry Smith M*/
316d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
317d382aafbSBarry Smith 
3186de5d289SStefano Zampini /*MC
3196de5d289SStefano Zampini     PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes
32087497f52SBarry Smith            MPI with `MPI_Init_thread()`.
3216de5d289SStefano Zampini 
3226de5d289SStefano Zampini    Level: beginner
3236de5d289SStefano Zampini 
3246de5d289SStefano Zampini    Notes:
32587497f52SBarry Smith    By default `PETSC_MPI_THREAD_REQUIRED` equals `MPI_THREAD_FUNNELED`.
3266de5d289SStefano Zampini 
327db781477SPatrick Sanan .seealso: `PetscInitialize()`
3286de5d289SStefano Zampini 
3296de5d289SStefano Zampini M*/
3306de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED;
3316de5d289SStefano Zampini 
332d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI;
3338ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized;
334014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled;
335014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled;
3364cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize;
337d382aafbSBarry Smith 
338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
34157f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm,MPI_Comm*);
34257f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm,MPI_Comm*);
343d382aafbSBarry Smith 
34459e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS)
34559e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void);  /* Initialize Kokkos if not yet. */
34659e55d94SJunchao Zhang #endif
34759e55d94SJunchao Zhang 
34871438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM)
34971438e86SJunchao Zhang PETSC_EXTERN PetscBool      PetscBeganNvshmem;
35071438e86SJunchao Zhang PETSC_EXTERN PetscBool      PetscNvshmemInitialized;
35171438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void);
35271438e86SJunchao Zhang #endif
35371438e86SJunchao Zhang 
354540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL)
355540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void);
356540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*);
357540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void);
358540e20f2SPierre Jolivet #endif
359540e20f2SPierre Jolivet 
360d382aafbSBarry Smith /*MC
36187497f52SBarry Smith    PetscMalloc - Allocates memory, One should use `PetscNew()`, `PetscMalloc1()` or `PetscCalloc1()` usually instead of this
362d382aafbSBarry Smith 
363eca87e8dSBarry Smith    Synopsis:
364aaa7dc30SBarry Smith     #include <petscsys.h>
365eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
366eca87e8dSBarry Smith 
367eca87e8dSBarry Smith    Not Collective
368eca87e8dSBarry Smith 
369d382aafbSBarry Smith    Input Parameter:
370d382aafbSBarry Smith .  m - number of bytes to allocate
371d382aafbSBarry Smith 
372d382aafbSBarry Smith    Output Parameter:
373d382aafbSBarry Smith .  result - memory allocated
374d382aafbSBarry Smith 
375d382aafbSBarry Smith    Level: beginner
376d382aafbSBarry Smith 
37749d7da52SJed Brown    Notes:
37849d7da52SJed Brown    Memory is always allocated at least double aligned
379d382aafbSBarry Smith 
38087497f52SBarry Smith    It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to `PetscFree()`.
381d382aafbSBarry Smith 
382db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`
383d382aafbSBarry Smith 
384d382aafbSBarry Smith M*/
385071fcb05SBarry Smith #define PetscMalloc(a,b)  ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b)))
386d382aafbSBarry Smith 
387d382aafbSBarry Smith /*MC
3883221ece2SMatthew G. Knepley    PetscRealloc - Rellocates memory
3893221ece2SMatthew G. Knepley 
3903221ece2SMatthew G. Knepley    Synopsis:
3913221ece2SMatthew G. Knepley     #include <petscsys.h>
3923221ece2SMatthew G. Knepley    PetscErrorCode PetscRealloc(size_t m,void **result)
3933221ece2SMatthew G. Knepley 
3943221ece2SMatthew G. Knepley    Not Collective
3953221ece2SMatthew G. Knepley 
3963221ece2SMatthew G. Knepley    Input Parameters:
3973221ece2SMatthew G. Knepley +  m - number of bytes to allocate
39892f119d6SBarry Smith -  result - previous memory
3993221ece2SMatthew G. Knepley 
4003221ece2SMatthew G. Knepley    Output Parameter:
4013221ece2SMatthew G. Knepley .  result - new memory allocated
4023221ece2SMatthew G. Knepley 
4033221ece2SMatthew G. Knepley    Level: developer
4043221ece2SMatthew G. Knepley 
4053221ece2SMatthew G. Knepley    Notes:
4063221ece2SMatthew G. Knepley    Memory is always allocated at least double aligned
4073221ece2SMatthew G. Knepley 
408db781477SPatrick Sanan .seealso: `PetscMalloc()`, `PetscFree()`, `PetscNew()`
4093221ece2SMatthew G. Knepley 
4103221ece2SMatthew G. Knepley M*/
4113221ece2SMatthew G. Knepley #define PetscRealloc(a,b)  ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b)))
4123221ece2SMatthew G. Knepley 
4133221ece2SMatthew G. Knepley /*MC
41487497f52SBarry Smith    PetscAddrAlign - Rounds up an address to `PETSC_MEMALIGN` alignment
415d382aafbSBarry Smith 
416d382aafbSBarry Smith    Synopsis:
417aaa7dc30SBarry Smith     #include <petscsys.h>
418d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
419d382aafbSBarry Smith 
420eca87e8dSBarry Smith    Not Collective
421eca87e8dSBarry Smith 
422eca87e8dSBarry Smith    Input Parameters:
423eca87e8dSBarry Smith .  addr - address to align (any pointer type)
424eca87e8dSBarry Smith 
425d382aafbSBarry Smith    Level: developer
426d382aafbSBarry Smith 
427db781477SPatrick Sanan .seealso: `PetscMallocAlign()`
428d382aafbSBarry Smith 
429d382aafbSBarry Smith M*/
430d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
431d382aafbSBarry Smith 
432d382aafbSBarry Smith /*MC
43387497f52SBarry Smith    PetscCalloc - Allocates a cleared (zeroed) memory region aligned to `PETSC_MEMALIGN`
4348f51dc47SJunchao Zhang 
4358f51dc47SJunchao Zhang    Synopsis:
4368f51dc47SJunchao Zhang     #include <petscsys.h>
4378f51dc47SJunchao Zhang    PetscErrorCode PetscCalloc(size_t m,void **result)
4388f51dc47SJunchao Zhang 
4398f51dc47SJunchao Zhang    Not Collective
4408f51dc47SJunchao Zhang 
4418f51dc47SJunchao Zhang    Input Parameter:
4428f51dc47SJunchao Zhang .  m - number of bytes to allocate
4438f51dc47SJunchao Zhang 
4448f51dc47SJunchao Zhang    Output Parameter:
4458f51dc47SJunchao Zhang .  result - memory allocated
4468f51dc47SJunchao Zhang 
4478f51dc47SJunchao Zhang    Level: beginner
4488f51dc47SJunchao Zhang 
4498f51dc47SJunchao Zhang    Notes:
4508f51dc47SJunchao Zhang    Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers
4518f51dc47SJunchao Zhang 
4528f51dc47SJunchao Zhang    It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree().
4538f51dc47SJunchao Zhang 
454db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`
4558f51dc47SJunchao Zhang 
4568f51dc47SJunchao Zhang M*/
45766122d6dSBarry Smith #define PetscCalloc(m,result)  PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m),(result))
4588f51dc47SJunchao Zhang 
4598f51dc47SJunchao Zhang /*MC
46087497f52SBarry Smith    PetscMalloc1 - Allocates an array of memory aligned to `PETSC_MEMALIGN`
461d382aafbSBarry Smith 
462eca87e8dSBarry Smith    Synopsis:
463aaa7dc30SBarry Smith     #include <petscsys.h>
464785e854fSJed Brown    PetscErrorCode PetscMalloc1(size_t m1,type **r1)
465785e854fSJed Brown 
466785e854fSJed Brown    Not Collective
467785e854fSJed Brown 
468785e854fSJed Brown    Input Parameter:
469390e1bf2SBarry Smith .  m1 - number of elements to allocate  (may be zero)
470785e854fSJed Brown 
471785e854fSJed Brown    Output Parameter:
4721fe1b817SJunchao Zhang .  r1 - memory allocated
473785e854fSJed Brown 
474e28ce29aSPatrick Sanan    Note:
475e28ce29aSPatrick Sanan    This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not
47687497f52SBarry Smith          multiply the number of elements requested by the `sizeof()` the type. For example use
477390e1bf2SBarry Smith $  PetscInt *id;
478390e1bf2SBarry Smith $  PetscMalloc1(10,&id);
479390e1bf2SBarry Smith         not
480390e1bf2SBarry Smith $  PetscInt *id;
481390e1bf2SBarry Smith $  PetscMalloc1(10*sizeof(PetscInt),&id);
482390e1bf2SBarry Smith 
48387497f52SBarry Smith         Does not zero the memory allocated, use `PetscCalloc1()` to obtain memory that has been zeroed.
484390e1bf2SBarry Smith 
485390e1bf2SBarry Smith    Level: beginner
486785e854fSJed Brown 
487db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()`
488785e854fSJed Brown 
489785e854fSJed Brown M*/
49066122d6dSBarry Smith #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1))
491785e854fSJed Brown 
492785e854fSJed Brown /*MC
49387497f52SBarry Smith    PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to `PETSC_MEMALIGN`
4941795a4d1SJed Brown 
4951795a4d1SJed Brown    Synopsis:
496aaa7dc30SBarry Smith     #include <petscsys.h>
4971795a4d1SJed Brown    PetscErrorCode PetscCalloc1(size_t m1,type **r1)
4981795a4d1SJed Brown 
4991795a4d1SJed Brown    Not Collective
5001795a4d1SJed Brown 
5011795a4d1SJed Brown    Input Parameter:
5021795a4d1SJed Brown .  m1 - number of elements to allocate in 1st chunk  (may be zero)
5031795a4d1SJed Brown 
5041795a4d1SJed Brown    Output Parameter:
5051fe1b817SJunchao Zhang .  r1 - memory allocated
5061795a4d1SJed Brown 
507e28ce29aSPatrick Sanan    Notes:
50887497f52SBarry Smith    See `PetsMalloc1()` for more details on usage.
509390e1bf2SBarry Smith 
510390e1bf2SBarry Smith    Level: beginner
5111795a4d1SJed Brown 
512db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()`
5131795a4d1SJed Brown 
5141795a4d1SJed Brown M*/
51566122d6dSBarry Smith #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1))
5161795a4d1SJed Brown 
5171795a4d1SJed Brown /*MC
51887497f52SBarry Smith    PetscMalloc2 - Allocates 2 arrays of memory both aligned to `PETSC_MEMALIGN`
519d382aafbSBarry Smith 
520eca87e8dSBarry Smith    Synopsis:
521aaa7dc30SBarry Smith     #include <petscsys.h>
522dcca6d9dSJed Brown    PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2)
523eca87e8dSBarry Smith 
524eca87e8dSBarry Smith    Not Collective
525eca87e8dSBarry Smith 
526d8d19677SJose E. Roman    Input Parameters:
527d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
528dcca6d9dSJed Brown -  m2 - number of elements to allocate in 2nd chunk  (may be zero)
529d382aafbSBarry Smith 
530d8d19677SJose E. Roman    Output Parameters:
531d382aafbSBarry Smith +  r1 - memory allocated in first chunk
532d382aafbSBarry Smith -  r2 - memory allocated in second chunk
533d382aafbSBarry Smith 
534d382aafbSBarry Smith    Level: developer
535d382aafbSBarry Smith 
536db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()`
537d382aafbSBarry Smith 
538d382aafbSBarry Smith M*/
53966122d6dSBarry Smith #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2))
540d382aafbSBarry Smith 
541d382aafbSBarry Smith /*MC
54287497f52SBarry Smith    PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to `PETSC_MEMALIGN`
543d382aafbSBarry Smith 
544eca87e8dSBarry Smith    Synopsis:
545aaa7dc30SBarry Smith     #include <petscsys.h>
5461795a4d1SJed Brown    PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2)
547eca87e8dSBarry Smith 
548eca87e8dSBarry Smith    Not Collective
549eca87e8dSBarry Smith 
550d8d19677SJose E. Roman    Input Parameters:
551d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
5521795a4d1SJed Brown -  m2 - number of elements to allocate in 2nd chunk  (may be zero)
5531795a4d1SJed Brown 
554d8d19677SJose E. Roman    Output Parameters:
5551795a4d1SJed Brown +  r1 - memory allocated in first chunk
5561795a4d1SJed Brown -  r2 - memory allocated in second chunk
5571795a4d1SJed Brown 
5581795a4d1SJed Brown    Level: developer
5591795a4d1SJed Brown 
560db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()`
5611795a4d1SJed Brown 
5621795a4d1SJed Brown M*/
56366122d6dSBarry Smith #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2))
5641795a4d1SJed Brown 
5651795a4d1SJed Brown /*MC
56687497f52SBarry Smith    PetscMalloc3 - Allocates 3 arrays of memory, all aligned to `PETSC_MEMALIGN`
567d382aafbSBarry Smith 
568d382aafbSBarry Smith    Synopsis:
569aaa7dc30SBarry Smith     #include <petscsys.h>
570dcca6d9dSJed Brown    PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3)
571d382aafbSBarry Smith 
572d382aafbSBarry Smith    Not Collective
573d382aafbSBarry Smith 
574d8d19677SJose E. Roman    Input Parameters:
575d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
576d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
577dcca6d9dSJed Brown -  m3 - number of elements to allocate in 3rd chunk  (may be zero)
578d382aafbSBarry Smith 
579d8d19677SJose E. Roman    Output Parameters:
580d382aafbSBarry Smith +  r1 - memory allocated in first chunk
581d382aafbSBarry Smith .  r2 - memory allocated in second chunk
582d382aafbSBarry Smith -  r3 - memory allocated in third chunk
583d382aafbSBarry Smith 
584d382aafbSBarry Smith    Level: developer
585d382aafbSBarry Smith 
586db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc3()`, `PetscFree3()`
587d382aafbSBarry Smith 
588d382aafbSBarry Smith M*/
58966122d6dSBarry Smith #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3))
590d382aafbSBarry Smith 
591d382aafbSBarry Smith /*MC
59287497f52SBarry Smith    PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN`
593d382aafbSBarry Smith 
594eca87e8dSBarry Smith    Synopsis:
595aaa7dc30SBarry Smith     #include <petscsys.h>
5961795a4d1SJed Brown    PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3)
597eca87e8dSBarry Smith 
598eca87e8dSBarry Smith    Not Collective
599eca87e8dSBarry Smith 
600d8d19677SJose E. Roman    Input Parameters:
601d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
602d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
6031795a4d1SJed Brown -  m3 - number of elements to allocate in 3rd chunk  (may be zero)
6041795a4d1SJed Brown 
605d8d19677SJose E. Roman    Output Parameters:
6061795a4d1SJed Brown +  r1 - memory allocated in first chunk
6071795a4d1SJed Brown .  r2 - memory allocated in second chunk
6081795a4d1SJed Brown -  r3 - memory allocated in third chunk
6091795a4d1SJed Brown 
6101795a4d1SJed Brown    Level: developer
6111795a4d1SJed Brown 
612db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc2()`, `PetscMalloc3()`, `PetscFree3()`
6131795a4d1SJed Brown 
6141795a4d1SJed Brown M*/
61566122d6dSBarry Smith #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3))
6161795a4d1SJed Brown 
6171795a4d1SJed Brown /*MC
61887497f52SBarry Smith    PetscMalloc4 - Allocates 4 arrays of memory, all aligned to `PETSC_MEMALIGN`
619d382aafbSBarry Smith 
620d382aafbSBarry Smith    Synopsis:
621aaa7dc30SBarry Smith     #include <petscsys.h>
622dcca6d9dSJed Brown    PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4)
623d382aafbSBarry Smith 
624d382aafbSBarry Smith    Not Collective
625d382aafbSBarry Smith 
626d8d19677SJose E. Roman    Input Parameters:
627d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
628d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
629d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
630dcca6d9dSJed Brown -  m4 - number of elements to allocate in 4th chunk  (may be zero)
631d382aafbSBarry Smith 
632d8d19677SJose E. Roman    Output Parameters:
633d382aafbSBarry Smith +  r1 - memory allocated in first chunk
634d382aafbSBarry Smith .  r2 - memory allocated in second chunk
635d382aafbSBarry Smith .  r3 - memory allocated in third chunk
636d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
637d382aafbSBarry Smith 
638d382aafbSBarry Smith    Level: developer
639d382aafbSBarry Smith 
640db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()`
641d382aafbSBarry Smith 
642d382aafbSBarry Smith M*/
64366122d6dSBarry Smith #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4))
644d382aafbSBarry Smith 
645d382aafbSBarry Smith /*MC
64687497f52SBarry Smith    PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN`
647d382aafbSBarry Smith 
648eca87e8dSBarry Smith    Synopsis:
649aaa7dc30SBarry Smith     #include <petscsys.h>
6501795a4d1SJed Brown    PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4)
651eca87e8dSBarry Smith 
652eca87e8dSBarry Smith    Not Collective
653eca87e8dSBarry Smith 
654e28ce29aSPatrick Sanan    Input Parameters:
655d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
656d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
657d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
6581795a4d1SJed Brown -  m4 - number of elements to allocate in 4th chunk  (may be zero)
6591795a4d1SJed Brown 
660e28ce29aSPatrick Sanan    Output Parameters:
6611795a4d1SJed Brown +  r1 - memory allocated in first chunk
6621795a4d1SJed Brown .  r2 - memory allocated in second chunk
6631795a4d1SJed Brown .  r3 - memory allocated in third chunk
6641795a4d1SJed Brown -  r4 - memory allocated in fourth chunk
6651795a4d1SJed Brown 
6661795a4d1SJed Brown    Level: developer
6671795a4d1SJed Brown 
668db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()`
6691795a4d1SJed Brown 
6701795a4d1SJed Brown M*/
67166122d6dSBarry Smith #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4))
6721795a4d1SJed Brown 
6731795a4d1SJed Brown /*MC
67487497f52SBarry Smith    PetscMalloc5 - Allocates 5 arrays of memory, all aligned to `PETSC_MEMALIGN`
675d382aafbSBarry Smith 
676d382aafbSBarry Smith    Synopsis:
677aaa7dc30SBarry Smith     #include <petscsys.h>
678dcca6d9dSJed Brown    PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5)
679d382aafbSBarry Smith 
680d382aafbSBarry Smith    Not Collective
681d382aafbSBarry Smith 
682e28ce29aSPatrick Sanan    Input Parameters:
683d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
684d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
685d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
686d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
687dcca6d9dSJed Brown -  m5 - number of elements to allocate in 5th chunk  (may be zero)
688d382aafbSBarry Smith 
689e28ce29aSPatrick Sanan    Output Parameters:
690d382aafbSBarry Smith +  r1 - memory allocated in first chunk
691d382aafbSBarry Smith .  r2 - memory allocated in second chunk
692d382aafbSBarry Smith .  r3 - memory allocated in third chunk
693d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
694d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
695d382aafbSBarry Smith 
696d382aafbSBarry Smith    Level: developer
697d382aafbSBarry Smith 
698db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc5()`, `PetscFree5()`
699d382aafbSBarry Smith 
700d382aafbSBarry Smith M*/
70166122d6dSBarry Smith #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5))
702d382aafbSBarry Smith 
703d382aafbSBarry Smith /*MC
70487497f52SBarry Smith    PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN`
705d382aafbSBarry Smith 
706eca87e8dSBarry Smith    Synopsis:
707aaa7dc30SBarry Smith     #include <petscsys.h>
7081795a4d1SJed Brown    PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5)
709eca87e8dSBarry Smith 
710eca87e8dSBarry Smith    Not Collective
711eca87e8dSBarry Smith 
712e28ce29aSPatrick Sanan    Input Parameters:
713d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
714d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
715d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
716d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
7171795a4d1SJed Brown -  m5 - number of elements to allocate in 5th chunk  (may be zero)
7181795a4d1SJed Brown 
719e28ce29aSPatrick Sanan    Output Parameters:
7201795a4d1SJed Brown +  r1 - memory allocated in first chunk
7211795a4d1SJed Brown .  r2 - memory allocated in second chunk
7221795a4d1SJed Brown .  r3 - memory allocated in third chunk
7231795a4d1SJed Brown .  r4 - memory allocated in fourth chunk
7241795a4d1SJed Brown -  r5 - memory allocated in fifth chunk
7251795a4d1SJed Brown 
7261795a4d1SJed Brown    Level: developer
7271795a4d1SJed Brown 
728db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc5()`, `PetscFree5()`
7291795a4d1SJed Brown 
7301795a4d1SJed Brown M*/
73166122d6dSBarry Smith #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5))
732d382aafbSBarry Smith 
733d382aafbSBarry Smith /*MC
73487497f52SBarry Smith    PetscMalloc6 - Allocates 6 arrays of memory, all aligned to `PETSC_MEMALIGN`
735d382aafbSBarry Smith 
736d382aafbSBarry Smith    Synopsis:
737aaa7dc30SBarry Smith     #include <petscsys.h>
738dcca6d9dSJed Brown    PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6)
739d382aafbSBarry Smith 
740d382aafbSBarry Smith    Not Collective
741d382aafbSBarry Smith 
742e28ce29aSPatrick Sanan    Input Parameters:
743d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
744d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
745d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
746d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
747d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
748dcca6d9dSJed Brown -  m6 - number of elements to allocate in 6th chunk  (may be zero)
749d382aafbSBarry Smith 
750e28ce29aSPatrick Sanan    Output Parameteasr:
751d382aafbSBarry Smith +  r1 - memory allocated in first chunk
752d382aafbSBarry Smith .  r2 - memory allocated in second chunk
753d382aafbSBarry Smith .  r3 - memory allocated in third chunk
754d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
755d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
756d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
757d382aafbSBarry Smith 
758d382aafbSBarry Smith    Level: developer
759d382aafbSBarry Smith 
760db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc6()`, `PetscFree3()`, `PetscFree4()`, `PetscFree5()`, `PetscFree6()`
761d382aafbSBarry Smith 
762d382aafbSBarry Smith M*/
76366122d6dSBarry Smith #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6))
764d382aafbSBarry Smith 
765d382aafbSBarry Smith /*MC
76687497f52SBarry Smith    PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN`
767d382aafbSBarry Smith 
768eca87e8dSBarry Smith    Synopsis:
769aaa7dc30SBarry Smith     #include <petscsys.h>
7701795a4d1SJed Brown    PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6)
771eca87e8dSBarry Smith 
772eca87e8dSBarry Smith    Not Collective
773eca87e8dSBarry Smith 
774e28ce29aSPatrick Sanan    Input Parameters:
775d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
776d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
777d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
778d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
779d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
7801795a4d1SJed Brown -  m6 - number of elements to allocate in 6th chunk  (may be zero)
7811795a4d1SJed Brown 
782e28ce29aSPatrick Sanan    Output Parameters:
7831795a4d1SJed Brown +  r1 - memory allocated in first chunk
7841795a4d1SJed Brown .  r2 - memory allocated in second chunk
7851795a4d1SJed Brown .  r3 - memory allocated in third chunk
7861795a4d1SJed Brown .  r4 - memory allocated in fourth chunk
7871795a4d1SJed Brown .  r5 - memory allocated in fifth chunk
7881795a4d1SJed Brown -  r6 - memory allocated in sixth chunk
7891795a4d1SJed Brown 
7901795a4d1SJed Brown    Level: developer
7911795a4d1SJed Brown 
792db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc6()`, `PetscFree6()`
7931795a4d1SJed Brown 
7941795a4d1SJed Brown M*/
79566122d6dSBarry Smith #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6))
7961795a4d1SJed Brown 
7971795a4d1SJed Brown /*MC
79887497f52SBarry Smith    PetscMalloc7 - Allocates 7 arrays of memory, all aligned to `PETSC_MEMALIGN`
799d382aafbSBarry Smith 
800d382aafbSBarry Smith    Synopsis:
801aaa7dc30SBarry Smith     #include <petscsys.h>
802dcca6d9dSJed Brown    PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7)
803d382aafbSBarry Smith 
804d382aafbSBarry Smith    Not Collective
805d382aafbSBarry Smith 
806e28ce29aSPatrick Sanan    Input Parameters:
807d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
808d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
809d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
810d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
811d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
812d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
813dcca6d9dSJed Brown -  m7 - number of elements to allocate in 7th chunk  (may be zero)
814d382aafbSBarry Smith 
815e28ce29aSPatrick Sanan    Output Parameters:
816d382aafbSBarry Smith +  r1 - memory allocated in first chunk
817d382aafbSBarry Smith .  r2 - memory allocated in second chunk
818d382aafbSBarry Smith .  r3 - memory allocated in third chunk
819d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
820d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
821d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
822eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
823d382aafbSBarry Smith 
824d382aafbSBarry Smith    Level: developer
825d382aafbSBarry Smith 
826db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc7()`, `PetscFree7()`
827d382aafbSBarry Smith 
828d382aafbSBarry Smith M*/
82966122d6dSBarry Smith #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6),(size_t)((size_t)m7)*sizeof(**(r7)),(r7))
830d382aafbSBarry Smith 
831d382aafbSBarry Smith /*MC
83287497f52SBarry Smith    PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN`
8331795a4d1SJed Brown 
8341795a4d1SJed Brown    Synopsis:
835aaa7dc30SBarry Smith     #include <petscsys.h>
8361795a4d1SJed Brown    PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7)
8371795a4d1SJed Brown 
8381795a4d1SJed Brown    Not Collective
8391795a4d1SJed Brown 
840e28ce29aSPatrick Sanan    Input Parameters:
8411795a4d1SJed Brown +  m1 - number of elements to allocate in 1st chunk  (may be zero)
8421795a4d1SJed Brown .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
8431795a4d1SJed Brown .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
8441795a4d1SJed Brown .  m4 - number of elements to allocate in 4th chunk  (may be zero)
8451795a4d1SJed Brown .  m5 - number of elements to allocate in 5th chunk  (may be zero)
8461795a4d1SJed Brown .  m6 - number of elements to allocate in 6th chunk  (may be zero)
8471795a4d1SJed Brown -  m7 - number of elements to allocate in 7th chunk  (may be zero)
8481795a4d1SJed Brown 
849e28ce29aSPatrick Sanan    Output Parameters:
8501795a4d1SJed Brown +  r1 - memory allocated in first chunk
8511795a4d1SJed Brown .  r2 - memory allocated in second chunk
8521795a4d1SJed Brown .  r3 - memory allocated in third chunk
8531795a4d1SJed Brown .  r4 - memory allocated in fourth chunk
8541795a4d1SJed Brown .  r5 - memory allocated in fifth chunk
8551795a4d1SJed Brown .  r6 - memory allocated in sixth chunk
8561795a4d1SJed Brown -  r7 - memory allocated in seventh chunk
8571795a4d1SJed Brown 
8581795a4d1SJed Brown    Level: developer
8591795a4d1SJed Brown 
860db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc7()`, `PetscFree7()`
8611795a4d1SJed Brown 
8621795a4d1SJed Brown M*/
86366122d6dSBarry Smith #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6),(size_t)((size_t)m7)*sizeof(**(r7)),(r7))
8641795a4d1SJed Brown 
8651795a4d1SJed Brown /*MC
86687497f52SBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to `PETSC_MEMALIGN`
867d382aafbSBarry Smith 
868eca87e8dSBarry Smith    Synopsis:
869aaa7dc30SBarry Smith     #include <petscsys.h>
870b00a9115SJed Brown    PetscErrorCode PetscNew(type **result)
871eca87e8dSBarry Smith 
872eca87e8dSBarry Smith    Not Collective
873eca87e8dSBarry Smith 
874d382aafbSBarry Smith    Output Parameter:
875b00a9115SJed Brown .  result - memory allocated, sized to match pointer type
876d382aafbSBarry Smith 
877d382aafbSBarry Smith    Level: beginner
878d382aafbSBarry Smith 
879db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscMalloc()`, `PetscNewLog()`, `PetscCalloc1()`, `PetscMalloc1()`
880d382aafbSBarry Smith 
881d382aafbSBarry Smith M*/
882b00a9115SJed Brown #define PetscNew(b)      PetscCalloc1(1,(b))
883ad0619ddSBarry Smith 
884ad0619ddSBarry Smith /*MC
88587497f52SBarry Smith    PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to `PETSC_MEMALIGN`. Associates the memory allocated
88687497f52SBarry Smith          with the given object using `PetscLogObjectMemory()`.
887ad0619ddSBarry Smith 
888ad0619ddSBarry Smith    Synopsis:
889aaa7dc30SBarry Smith     #include <petscsys.h>
890b00a9115SJed Brown    PetscErrorCode PetscNewLog(PetscObject obj,type **result)
891ad0619ddSBarry Smith 
892ad0619ddSBarry Smith    Not Collective
893ad0619ddSBarry Smith 
894ad0619ddSBarry Smith    Input Parameter:
895b00a9115SJed Brown .  obj - object memory is logged to
896ad0619ddSBarry Smith 
897ad0619ddSBarry Smith    Output Parameter:
898b00a9115SJed Brown .  result - memory allocated, sized to match pointer type
899ad0619ddSBarry Smith 
900ad0619ddSBarry Smith    Level: developer
901ad0619ddSBarry Smith 
902db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscMalloc()`, `PetscNew()`, `PetscLogObjectMemory()`, `PetscCalloc1()`, `PetscMalloc1()`
903ad0619ddSBarry Smith 
904ad0619ddSBarry Smith M*/
905d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b))))
906d382aafbSBarry Smith 
907d382aafbSBarry Smith /*MC
908d382aafbSBarry Smith    PetscFree - Frees memory
909d382aafbSBarry Smith 
910eca87e8dSBarry Smith    Synopsis:
911aaa7dc30SBarry Smith     #include <petscsys.h>
912eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
913eca87e8dSBarry Smith 
914eca87e8dSBarry Smith    Not Collective
915eca87e8dSBarry Smith 
916d382aafbSBarry Smith    Input Parameter:
9177f4976b7SJacob Faibussowitsch .   memory - memory to free (the pointer is ALWAYS set to NULL upon success)
918d382aafbSBarry Smith 
919d382aafbSBarry Smith    Level: beginner
920d382aafbSBarry Smith 
92149d7da52SJed Brown    Notes:
92287497f52SBarry Smith    Do not free memory obtained with `PetscMalloc2()`, `PetscCalloc2()` etc, they must be freed with `PetscFree2()` etc.
923390e1bf2SBarry Smith 
92487497f52SBarry Smith    It is safe to call `PetscFree()` on a NULL pointer.
925d382aafbSBarry Smith 
926db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscNewLog()`, `PetscMalloc1()`, `PetscCalloc1()`
927d382aafbSBarry Smith 
928d382aafbSBarry Smith M*/
929ffc31a0eSLisandro Dalcin #define PetscFree(a)   ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0))
930d382aafbSBarry Smith 
931d382aafbSBarry Smith /*MC
93287497f52SBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with `PetscMalloc2()`
933d382aafbSBarry Smith 
934eca87e8dSBarry Smith    Synopsis:
935aaa7dc30SBarry Smith     #include <petscsys.h>
936eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
937eca87e8dSBarry Smith 
938eca87e8dSBarry Smith    Not Collective
939eca87e8dSBarry Smith 
940e28ce29aSPatrick Sanan    Input Parameters:
941d382aafbSBarry Smith +   memory1 - memory to free
942d382aafbSBarry Smith -   memory2 - 2nd memory to free
943d382aafbSBarry Smith 
944d382aafbSBarry Smith    Level: developer
945d382aafbSBarry Smith 
94695452b02SPatrick Sanan    Notes:
94787497f52SBarry Smith     Memory must have been obtained with `PetscMalloc2()`
948d382aafbSBarry Smith 
949db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`
950d382aafbSBarry Smith 
951d382aafbSBarry Smith M*/
952ba282f50SJed Brown #define PetscFree2(m1,m2)   PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2))
953d382aafbSBarry Smith 
954d382aafbSBarry Smith /*MC
95587497f52SBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with `PetscMalloc3()`
956d382aafbSBarry Smith 
957eca87e8dSBarry Smith    Synopsis:
958aaa7dc30SBarry Smith     #include <petscsys.h>
959eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
960eca87e8dSBarry Smith 
961eca87e8dSBarry Smith    Not Collective
962eca87e8dSBarry Smith 
963e28ce29aSPatrick Sanan    Input Parameters:
964d382aafbSBarry Smith +   memory1 - memory to free
965d382aafbSBarry Smith .   memory2 - 2nd memory to free
966d382aafbSBarry Smith -   memory3 - 3rd memory to free
967d382aafbSBarry Smith 
968d382aafbSBarry Smith    Level: developer
969d382aafbSBarry Smith 
97095452b02SPatrick Sanan    Notes:
97187497f52SBarry Smith     Memory must have been obtained with `PetscMalloc3()`
972d382aafbSBarry Smith 
973db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`
974d382aafbSBarry Smith 
975d382aafbSBarry Smith M*/
976ba282f50SJed Brown #define PetscFree3(m1,m2,m3)   PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3))
977d382aafbSBarry Smith 
978d382aafbSBarry Smith /*MC
97987497f52SBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with `PetscMalloc4()`
980d382aafbSBarry Smith 
981eca87e8dSBarry Smith    Synopsis:
982aaa7dc30SBarry Smith     #include <petscsys.h>
983eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
984eca87e8dSBarry Smith 
985eca87e8dSBarry Smith    Not Collective
986eca87e8dSBarry Smith 
987e28ce29aSPatrick Sanan    Input Parameters:
988d382aafbSBarry Smith +   m1 - memory to free
989d382aafbSBarry Smith .   m2 - 2nd memory to free
990d382aafbSBarry Smith .   m3 - 3rd memory to free
991d382aafbSBarry Smith -   m4 - 4th memory to free
992d382aafbSBarry Smith 
993d382aafbSBarry Smith    Level: developer
994d382aafbSBarry Smith 
99595452b02SPatrick Sanan    Notes:
99687497f52SBarry Smith     Memory must have been obtained with `PetscMalloc4()`
997d382aafbSBarry Smith 
998db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`
999d382aafbSBarry Smith 
1000d382aafbSBarry Smith M*/
1001ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4)   PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4))
1002d382aafbSBarry Smith 
1003d382aafbSBarry Smith /*MC
100487497f52SBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with `PetscMalloc5()`
1005d382aafbSBarry Smith 
1006eca87e8dSBarry Smith    Synopsis:
1007aaa7dc30SBarry Smith     #include <petscsys.h>
1008eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1009eca87e8dSBarry Smith 
1010eca87e8dSBarry Smith    Not Collective
1011eca87e8dSBarry Smith 
1012e28ce29aSPatrick Sanan    Input Parameters:
1013d382aafbSBarry Smith +   m1 - memory to free
1014d382aafbSBarry Smith .   m2 - 2nd memory to free
1015d382aafbSBarry Smith .   m3 - 3rd memory to free
1016d382aafbSBarry Smith .   m4 - 4th memory to free
1017d382aafbSBarry Smith -   m5 - 5th memory to free
1018d382aafbSBarry Smith 
1019d382aafbSBarry Smith    Level: developer
1020d382aafbSBarry Smith 
102195452b02SPatrick Sanan    Notes:
102287497f52SBarry Smith     Memory must have been obtained with `PetscMalloc5()`
1023d382aafbSBarry Smith 
1024db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`
1025d382aafbSBarry Smith 
1026d382aafbSBarry Smith M*/
1027ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5))
1028d382aafbSBarry Smith 
1029d382aafbSBarry Smith /*MC
103087497f52SBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with `PetscMalloc6()`
1031d382aafbSBarry Smith 
1032eca87e8dSBarry Smith    Synopsis:
1033aaa7dc30SBarry Smith     #include <petscsys.h>
1034eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1035eca87e8dSBarry Smith 
1036eca87e8dSBarry Smith    Not Collective
1037eca87e8dSBarry Smith 
1038e28ce29aSPatrick Sanan    Input Parameters:
1039d382aafbSBarry Smith +   m1 - memory to free
1040d382aafbSBarry Smith .   m2 - 2nd memory to free
1041d382aafbSBarry Smith .   m3 - 3rd memory to free
1042d382aafbSBarry Smith .   m4 - 4th memory to free
1043d382aafbSBarry Smith .   m5 - 5th memory to free
1044d382aafbSBarry Smith -   m6 - 6th memory to free
1045d382aafbSBarry Smith 
1046d382aafbSBarry Smith    Level: developer
1047d382aafbSBarry Smith 
104895452b02SPatrick Sanan    Notes:
104987497f52SBarry Smith     Memory must have been obtained with `PetscMalloc6()`
1050d382aafbSBarry Smith 
1051db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`
1052d382aafbSBarry Smith 
1053d382aafbSBarry Smith M*/
1054ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6))
1055d382aafbSBarry Smith 
1056d382aafbSBarry Smith /*MC
105787497f52SBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with `PetscMalloc7()`
1058d382aafbSBarry Smith 
1059eca87e8dSBarry Smith    Synopsis:
1060aaa7dc30SBarry Smith     #include <petscsys.h>
1061eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1062eca87e8dSBarry Smith 
1063eca87e8dSBarry Smith    Not Collective
1064eca87e8dSBarry Smith 
1065e28ce29aSPatrick Sanan    Input Parameters:
1066d382aafbSBarry Smith +   m1 - memory to free
1067d382aafbSBarry Smith .   m2 - 2nd memory to free
1068d382aafbSBarry Smith .   m3 - 3rd memory to free
1069d382aafbSBarry Smith .   m4 - 4th memory to free
1070d382aafbSBarry Smith .   m5 - 5th memory to free
1071d382aafbSBarry Smith .   m6 - 6th memory to free
1072d382aafbSBarry Smith -   m7 - 7th memory to free
1073d382aafbSBarry Smith 
1074d382aafbSBarry Smith    Level: developer
1075d382aafbSBarry Smith 
107695452b02SPatrick Sanan    Notes:
107787497f52SBarry Smith     Memory must have been obtained with `PetscMalloc7()`
1078d382aafbSBarry Smith 
1079db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`,
1080db781477SPatrick Sanan           `PetscMalloc7()`
1081d382aafbSBarry Smith 
1082d382aafbSBarry Smith M*/
1083ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7))
1084d382aafbSBarry Smith 
1085ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...);
1086ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...);
1087071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**);
1088efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]);
10893221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**);
1090ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool);
109192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **));
1092014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1093d382aafbSBarry Smith 
1094d382aafbSBarry Smith /*
1095c1706be6SHong Zhang   Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair.
1096c1706be6SHong Zhang */
1097c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void);
1098c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void);
109931f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA)
110031f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void);
110131f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void);
110231f06eaaSHong Zhang #endif
110359af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP)
110459af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void);
110559af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void);
110659af0bd3SScott Kruger #endif
110759af0bd3SScott Kruger 
1108a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE  MPI_DOUBLE
110936763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION
1110a5057860SBarry Smith 
1111a5057860SBarry Smith /*
111266d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc memory allocation
1113d382aafbSBarry Smith */
1114014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
111592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *);
1116014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1118e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int);
1119e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*);
112092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool);
112192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*);
1122efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]);
112392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble);
112492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*);
1125608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool);
1126608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*);
1127d382aafbSBarry Smith 
11286a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[];
1129014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1130014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1131014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
11328e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*);
1133d382aafbSBarry Smith 
1134d382aafbSBarry Smith /*
1135d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1136d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1137d382aafbSBarry Smith    functionality and/or error checking.
1138d382aafbSBarry Smith */
1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1141d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***);
1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool  *);
1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool  *);
1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1149a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t);
1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
11532f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]);
1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1157014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
11582c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*);
1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
116147340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***);
11626fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***);
11636991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***);
11646991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***);
1165014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1166d382aafbSBarry Smith 
1167573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool  *);
1168573b0fb4SBarry Smith 
1169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1172d382aafbSBarry Smith 
1173e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*);
117480b92c66SBarry Smith PETSC_EXTERN const char *PetscBasename(const char []);
1175a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*);
1176a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*);
1177a53986e1SJed Brown 
1178d382aafbSBarry Smith /*
1179d382aafbSBarry Smith    These are MPI operations for MPI_Allreduce() etc
1180d382aafbSBarry Smith */
1181367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP;
1182570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
1183de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM;
1184014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX;
1185014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN;
1186d9822059SBarry Smith #else
1187de272c7aSSatish Balay #define MPIU_SUM MPI_SUM
1188d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1189d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1190d9822059SBarry Smith #endif
1191*613bf2b2SPierre Jolivet #if defined(PETSC_HAVE_REAL___FLOAT128)
1192*613bf2b2SPierre Jolivet /*MC
1193*613bf2b2SPierre Jolivet     MPIU_SUM___FLOAT128 - MPI_Op that acts as a replacement for MPI_SUM with
1194*613bf2b2SPierre Jolivet     custom MPI_Datatype `MPIU___FLOAT128` and `MPIU___COMPLEX128`.
1195*613bf2b2SPierre Jolivet 
1196*613bf2b2SPierre Jolivet    Level: advanced
1197*613bf2b2SPierre Jolivet 
1198*613bf2b2SPierre Jolivet    Developer Note:
1199*613bf2b2SPierre Jolivet    This should be unified with `MPIU_SUM`
1200*613bf2b2SPierre Jolivet 
1201*613bf2b2SPierre Jolivet .seealso: `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX`
1202*613bf2b2SPierre Jolivet M*/
1203*613bf2b2SPierre Jolivet PETSC_EXTERN MPI_Op MPIU_SUM___FLOAT128;
1204*613bf2b2SPierre Jolivet #endif
1205014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1206d382aafbSBarry Smith 
1207014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1208014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1209eb3f98d2SBarry Smith 
121095c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[];
1211d6a4318aSJed Brown 
1212639ff905SBarry Smith /*
1213639ff905SBarry Smith     Defines PETSc error handling.
1214639ff905SBarry Smith */
1215639ff905SBarry Smith #include <petscerror.h>
1216d382aafbSBarry Smith 
1217660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabled;                    /* code is running in the PETSc test harness CI */
1218660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabledPortableErrorOutput; /* error output is stripped to ensure portability of error messages across systems */
1219660278c0SBarry Smith PETSC_EXTERN const char *PetscCIFilename(const char *);
1220660278c0SBarry Smith PETSC_EXTERN int PetscCILinenumber(int);
1221660278c0SBarry Smith 
12220700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
1223014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1224014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
122681256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*);
122781256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*);
122881256985SMatthew G. Knepley 
1229d382aafbSBarry Smith /*
1230d382aafbSBarry Smith    Routines that get memory usage information from the OS
1231d382aafbSBarry Smith */
1232014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1234014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1235b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]);
1236d382aafbSBarry Smith 
1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1238d382aafbSBarry Smith 
1239d382aafbSBarry Smith /*
1240d382aafbSBarry Smith    Initialization of PETSc
1241d382aafbSBarry Smith */
1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1252d382aafbSBarry Smith 
1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void);
1254607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void);
1255d382aafbSBarry Smith 
1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1260d382aafbSBarry Smith 
1261a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *);
1262a50e088cSMatthew G. Knepley 
1263d382aafbSBarry Smith /*
1264d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
12652981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1266d382aafbSBarry Smith */
1267638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);
1268638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);
1269638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1270d382aafbSBarry Smith 
1271d382aafbSBarry Smith /*
1272d382aafbSBarry Smith     Functions that can act on any PETSc object.
1273d382aafbSBarry Smith */
1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*);
1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*);
1291bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void));
1292bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d))
1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
12950eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject);
12960eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject);
1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*);
1298d382aafbSBarry Smith 
1299665c2dedSJed Brown #include <petscviewertypes.h>
1300639ff905SBarry Smith #include <petscoptions.h>
1301639ff905SBarry Smith 
1302608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble);
1303608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*);
1304608c71bfSMatthew G. Knepley 
13050633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
13060633abcbSJed Brown 
1307c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]);
1308dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer);
1309639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
13100005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr))
13110005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void));
1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1319685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]);
1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
13224099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *);
1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1324b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1327d382aafbSBarry Smith 
1328e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
13297aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void);
1330e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject);
1331e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool);
1332e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject);
1333e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject);
1334e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject);
1335e04113cfSBarry Smith PETSC_EXTERN void           PetscStackSAWsGrantAccess(void);
1336e04113cfSBarry Smith PETSC_EXTERN void           PetscStackSAWsTakeAccess(void);
1337e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void);
1338e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void);
133915681b3cSBarry Smith 
1340ec7429eaSBarry Smith #else
13417aab2a10SBarry Smith #define PetscSAWsBlock()                        0
1342e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj)             0
1343e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg)        0
1344e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj)               0
1345e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj)         0
1346e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj)          0
1347e04113cfSBarry Smith #define PetscStackViewSAWs()                    0
1348e04113cfSBarry Smith #define PetscStackSAWsViewOff()                 0
1349e04113cfSBarry Smith #define PetscStackSAWsTakeAccess()
1350e04113cfSBarry Smith #define PetscStackSAWsGrantAccess()
135115681b3cSBarry Smith 
1352ec7429eaSBarry Smith #endif
1353b90c6cbeSBarry Smith 
135482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *);
135582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *);
135682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **);
1357258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **);
1358258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX
1359258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **);
1360258ec3d2SMatthew G. Knepley #endif
13617d5d4d99SBarry Smith 
13625fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG)
1363a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**);
13645fe58b6fSBarry Smith #endif
13657eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool);
1366a64a8e02SBarry Smith 
1367140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*);
1368140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*);
1369140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*);
1370140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject);
1371140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]);
1372140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *);
1373d382aafbSBarry Smith 
1374d382aafbSBarry Smith /*
1375503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1376d382aafbSBarry Smith   link libraries that will be loaded as needed.
1377d382aafbSBarry Smith */
1378a240a19fSJed Brown 
1379a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr))
1380a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void));
1381140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*);
13821c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr))
13831c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void));
138444ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]);
1385140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *);
1386140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer);
1387140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*);
13882e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintNonEmpty(PetscFunctionList);
13892e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintAll(void);
1390d382aafbSBarry Smith 
1391014dd563SJed Brown PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;
1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1399d382aafbSBarry Smith 
1400d382aafbSBarry Smith /*
1401d382aafbSBarry Smith      Useful utility routines
1402d382aafbSBarry Smith */
1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1405d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*);
1406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
141058b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,const PetscInt[2],PetscInt[2]);
141158b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,const PetscReal[2],PetscReal[2]);
1412d382aafbSBarry Smith 
141364ac3b0dSPatrick Sanan /*MC
141487497f52SBarry Smith     PetscNot - negates a logical type value and returns result as a `PetscBool`
1415503cfb0cSBarry Smith 
1416e28ce29aSPatrick Sanan     Notes:
1417e28ce29aSPatrick Sanan     This is useful in cases like
1418503cfb0cSBarry Smith $     int        *a;
1419ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
14201cc8b206SBarry Smith      where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C.
142164ac3b0dSPatrick Sanan 
142264ac3b0dSPatrick Sanan     Level: beginner
142364ac3b0dSPatrick Sanan 
1424db781477SPatrick Sanan     .seealso `:` `PetscBool`, `PETSC_TRUE`, `PETSC_FALSE`
142564ac3b0dSPatrick Sanan M*/
1426d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1427503cfb0cSBarry Smith 
1428d382aafbSBarry Smith /*MC
1429d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1430d382aafbSBarry Smith 
1431d382aafbSBarry Smith    Synopsis:
1432aaa7dc30SBarry Smith     #include <petscsys.h>
1433659f7ba0SBarry Smith      PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args);
1434d382aafbSBarry Smith 
1435659f7ba0SBarry Smith     Collective on comm
1436eca87e8dSBarry Smith 
1437d382aafbSBarry Smith     Input Parameters:
1438659f7ba0SBarry Smith +  comm - the MPI communicator over which the help message is printed
1439d382aafbSBarry Smith .  format - the usual printf() format string
1440659f7ba0SBarry Smith -  args - arguments to be printed
1441d382aafbSBarry Smith 
1442d382aafbSBarry Smith    Level: developer
1443d382aafbSBarry Smith 
1444d382aafbSBarry Smith    Fortran Note:
1445d382aafbSBarry Smith      This routine is not supported in Fortran.
1446d382aafbSBarry Smith 
1447659f7ba0SBarry Smith    Note:
1448659f7ba0SBarry Smith      You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout.
1449659f7ba0SBarry Smith 
1450659f7ba0SBarry Smith       To use, write your own function, for example,
1451659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....)
1452659f7ba0SBarry Smith ${
1453659f7ba0SBarry Smith $ PetscFunctionReturn(0);
1454659f7ba0SBarry Smith $}
1455659f7ba0SBarry Smith then do the assigment
1456659f7ba0SBarry Smith $    PetscHelpPrintf = mypetschelpprintf;
145787497f52SBarry Smith    You can do the assignment before `PetscInitialize()`.
1458659f7ba0SBarry Smith 
145987497f52SBarry Smith   The default routine used is called `PetscHelpPrintfDefault()`.
1460d382aafbSBarry Smith 
1461db781477SPatrick Sanan .seealso: `PetscFPrintf()`, `PetscSynchronizedPrintf()`, `PetscErrorPrintf()`
1462d382aafbSBarry Smith M*/
14633ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3);
1464d382aafbSBarry Smith 
1465fcfd50ebSBarry Smith /*
1466fcfd50ebSBarry Smith      Defines PETSc profiling.
1467fcfd50ebSBarry Smith */
14682c8e378dSBarry Smith #include <petsclog.h>
1469fcfd50ebSBarry Smith 
1470fcfd50ebSBarry Smith /*
1471fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1472fcfd50ebSBarry Smith */
1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
14763ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_ATTRIBUTE_FORMAT(3,4);
14773ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3);
14783ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...) PETSC_ATTRIBUTE_FORMAT(3,4);
14793ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...) PETSC_ATTRIBUTE_FORMAT(3,5);
14801b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]);
1481fcfd50ebSBarry Smith 
14823ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...) PETSC_ATTRIBUTE_FORMAT(1,2);
14833ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...) PETSC_ATTRIBUTE_FORMAT(1,2);
14843ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...) PETSC_ATTRIBUTE_FORMAT(2,3);
1485d382aafbSBarry Smith 
1486d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*);
1487d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *);
1488d781fa04SBarry Smith 
1489d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
1491016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*);
149274ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]);
1493d382aafbSBarry Smith #endif
1494d382aafbSBarry Smith 
14953ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3);
14963ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_ATTRIBUTE_FORMAT(3,4);
14970ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*);
1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1502d382aafbSBarry Smith 
1503014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**);
1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*);
1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*);
1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*));
1509b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*);
1510d382aafbSBarry Smith 
1511d382aafbSBarry Smith /*
1512d382aafbSBarry Smith    For use in debuggers
1513d382aafbSBarry Smith */
1514014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1515014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1519d382aafbSBarry Smith 
1520a663daf8SBarry Smith #include <stddef.h>
1521a3aaec0aSJed Brown #include <string.h>             /* for memcpy, memset */
1522d382aafbSBarry Smith #include <stdlib.h>
15236c7e564aSBarry Smith 
15244a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1525d382aafbSBarry Smith #include <xmmintrin.h>
1526d382aafbSBarry Smith #endif
1527d382aafbSBarry Smith 
1528d382aafbSBarry Smith /*@C
1529580bdb30SBarry Smith    PetscMemmove - Copies n bytes, beginning at location b, to the space
1530580bdb30SBarry Smith    beginning at location a. Copying  between regions that overlap will
153187497f52SBarry Smith    take place correctly. Use `PetscMemcpy()` if the locations do not overlap
1532580bdb30SBarry Smith 
1533580bdb30SBarry Smith    Not Collective
1534580bdb30SBarry Smith 
1535580bdb30SBarry Smith    Input Parameters:
1536580bdb30SBarry Smith +  b - pointer to initial memory space
1537580bdb30SBarry Smith .  a - pointer to copy space
1538580bdb30SBarry Smith -  n - length (in bytes) of space to copy
1539580bdb30SBarry Smith 
1540580bdb30SBarry Smith    Level: intermediate
1541580bdb30SBarry Smith 
154287497f52SBarry Smith    Notes:
154387497f52SBarry Smith    `PetscArraymove()` is preferred
1544580bdb30SBarry Smith 
154587497f52SBarry Smith    This routine is analogous to `memmove()`.
154687497f52SBarry Smith 
154787497f52SBarry Smith    Developers Note:
154887497f52SBarry Smith    This is inlined for performance
1549580bdb30SBarry Smith 
1550db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscStrallocpy()`,
1551db781477SPatrick Sanan           `PetscArraymove()`
1552580bdb30SBarry Smith @*/
15539fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemmove(void *a,const void *b,size_t n)
1554580bdb30SBarry Smith {
1555580bdb30SBarry Smith   PetscFunctionBegin;
15569a202e32SJacob Faibussowitsch   if (n > 0) {
15572c71b3e2SJacob Faibussowitsch     PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer");
15582c71b3e2SJacob Faibussowitsch     PetscCheck(b,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
15599a202e32SJacob Faibussowitsch   }
1560580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE)
1561580bdb30SBarry Smith   if (a < b) {
1562580bdb30SBarry Smith     if (a <= b - n) memcpy(a,b,n);
1563580bdb30SBarry Smith     else {
1564580bdb30SBarry Smith       memcpy(a,b,(int)(b - a));
1565580bdb30SBarry Smith       PetscMemmove(b,b + (int)(b - a),n - (int)(b - a));
1566580bdb30SBarry Smith     }
1567580bdb30SBarry Smith   } else {
1568580bdb30SBarry Smith     if (b <= a - n) memcpy(a,b,n);
1569580bdb30SBarry Smith     else {
1570580bdb30SBarry Smith       memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b));
1571580bdb30SBarry Smith       PetscMemmove(a,b,n - (int)(a - b));
1572580bdb30SBarry Smith     }
1573580bdb30SBarry Smith   }
1574580bdb30SBarry Smith #else
1575580bdb30SBarry Smith   memmove((char*)(a),(char*)(b),n);
1576580bdb30SBarry Smith #endif
1577580bdb30SBarry Smith   PetscFunctionReturn(0);
1578580bdb30SBarry Smith }
1579580bdb30SBarry Smith 
1580d382aafbSBarry Smith /*@C
1581d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1582d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
158387497f52SBarry Smith    `PetscMemmove()` in that case.
1584d382aafbSBarry Smith 
1585d382aafbSBarry Smith    Not Collective
1586d382aafbSBarry Smith 
1587d382aafbSBarry Smith    Input Parameters:
1588d382aafbSBarry Smith +  b - pointer to initial memory space
1589d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1590d382aafbSBarry Smith 
1591d382aafbSBarry Smith    Output Parameter:
1592d382aafbSBarry Smith .  a - pointer to copy space
1593d382aafbSBarry Smith 
1594d382aafbSBarry Smith    Level: intermediate
1595d382aafbSBarry Smith 
1596d382aafbSBarry Smith    Compile Option:
159787497f52SBarry Smith     `PETSC_PREFER_DCOPY_FOR_MEMCPY` will cause the BLAS dcopy() routine to be used
1598d382aafbSBarry Smith                                   for memory copies on double precision values.
159987497f52SBarry Smith     `PETSC_PREFER_COPY_FOR_MEMCPY` will cause C code to be used
1600d382aafbSBarry Smith                                   for memory copies on double precision values.
160187497f52SBarry Smith     `PETSC_PREFER_FORTRAN_FORMEMCPY` will cause Fortran code to be used
1602d382aafbSBarry Smith                                   for memory copies on double precision values.
1603d382aafbSBarry Smith 
160487497f52SBarry Smith    Notes:
160587497f52SBarry Smith    Prefer `PetscArraycpy()`
160687497f52SBarry Smith 
160787497f52SBarry Smith    This routine is analogous to `memcpy()`.
160887497f52SBarry Smith 
16091fd49c25SBarry Smith    Not available from Fortran
16101fd49c25SBarry Smith 
161187497f52SBarry Smith    Developer Note:
161287497f52SBarry Smith    This is inlined for fastest performance
1613f5f57ec0SBarry Smith 
1614db781477SPatrick Sanan .seealso: `PetscMemzero()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`
1615d382aafbSBarry Smith 
1616d382aafbSBarry Smith @*/
16179fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n)
1618d382aafbSBarry Smith {
1619d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1620c5e4d11fSDmitry Karpeev   size_t al = (size_t) a,bl = (size_t) b;
1621c5e4d11fSDmitry Karpeev   size_t nl = (size_t) n;
1622a7e36092SMatthew G Knepley   PetscFunctionBegin;
16239a202e32SJacob Faibussowitsch   if (n > 0) {
16242c71b3e2SJacob Faibussowitsch     PetscCheck(b,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
16252c71b3e2SJacob Faibussowitsch     PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
16269a202e32SJacob Faibussowitsch   }
1627a7e36092SMatthew G Knepley #else
1628d382aafbSBarry Smith   PetscFunctionBegin;
1629a7e36092SMatthew G Knepley #endif
1630a47a537aSLisandro Dalcin   if (a != b && n > 0) {
1631d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
16322c71b3e2SJacob Faibussowitsch     PetscCheck(!((al > bl && (al - bl) < nl) || (bl - al) < nl),PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1633d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
16346244d25cSSatish Balay               Length (bytes) %zu first address %zu second address %zu",nl,al,bl);
1635d382aafbSBarry Smith #endif
1636d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1637c5e4d11fSDmitry Karpeev    if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1638d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1639d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1640c5df96a5SBarry Smith       PetscBLASInt one = 1,blen;
16419566063dSJacob Faibussowitsch       PetscCall(PetscBLASIntCast(len,&blen));
1642792fecdfSBarry Smith       PetscCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one));
1643d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1644d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1645d382aafbSBarry Smith #else
1646d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
16475f80ce2aSJacob Faibussowitsch       for (size_t i=0; i<len; i++) y[i] = x[i];
1648d382aafbSBarry Smith #endif
1649d382aafbSBarry Smith     } else {
1650d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1651d382aafbSBarry Smith     }
1652d382aafbSBarry Smith #else
1653d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1654d382aafbSBarry Smith #endif
1655d382aafbSBarry Smith   }
1656d382aafbSBarry Smith   PetscFunctionReturn(0);
1657d382aafbSBarry Smith }
1658d382aafbSBarry Smith 
1659d382aafbSBarry Smith /*@C
1660d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1661d382aafbSBarry Smith 
1662d382aafbSBarry Smith    Not Collective
1663d382aafbSBarry Smith 
1664d382aafbSBarry Smith    Input Parameters:
1665d382aafbSBarry Smith +  a - pointer to beginning memory location
1666d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1667d382aafbSBarry Smith 
1668d382aafbSBarry Smith    Level: intermediate
1669d382aafbSBarry Smith 
1670d382aafbSBarry Smith    Compile Option:
167187497f52SBarry Smith    `PETSC_PREFER_BZERO` - on certain machines (the IBM RS6000) the bzero() routine happens
1672d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1673d382aafbSBarry Smith 
167487497f52SBarry Smith    Notes:
16751fd49c25SBarry Smith    Not available from Fortran
16761fd49c25SBarry Smith 
167787497f52SBarry Smith    Prefer `PetscArrayzero()`
167887497f52SBarry Smith 
167987497f52SBarry Smith    Developer Note:
168087497f52SBarry Smith    This is inlined for fastest performance
1681503cfb0cSBarry Smith 
1682db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`
1683d382aafbSBarry Smith @*/
16849fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemzero(void *a,size_t n)
1685d382aafbSBarry Smith {
1686d382aafbSBarry Smith   if (n > 0) {
1687d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
16882c71b3e2SJacob Faibussowitsch     PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n);
1689d382aafbSBarry Smith #endif
1690d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1691d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1692d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1693d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1694d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1695d382aafbSBarry Smith     } else {
1696d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1697d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1698d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1699d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1700d382aafbSBarry Smith     } else {
1701d382aafbSBarry Smith #endif
1702d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1703d382aafbSBarry Smith       bzero((char *)a,n);
1704d382aafbSBarry Smith #else
1705d382aafbSBarry Smith       memset((char*)a,0,n);
1706d382aafbSBarry Smith #endif
1707d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1708d382aafbSBarry Smith     }
1709d382aafbSBarry Smith #endif
1710d382aafbSBarry Smith   }
1711d382aafbSBarry Smith   return 0;
1712d382aafbSBarry Smith }
1713d382aafbSBarry Smith 
1714d382aafbSBarry Smith /*MC
1715580bdb30SBarry Smith    PetscArraycmp - Compares two arrays in memory.
1716580bdb30SBarry Smith 
1717580bdb30SBarry Smith    Synopsis:
1718580bdb30SBarry Smith     #include <petscsys.h>
1719580bdb30SBarry Smith     PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e)
1720580bdb30SBarry Smith 
1721580bdb30SBarry Smith    Not Collective
1722580bdb30SBarry Smith 
1723580bdb30SBarry Smith    Input Parameters:
1724580bdb30SBarry Smith +  str1 - First array
1725580bdb30SBarry Smith .  str2 - Second array
1726580bdb30SBarry Smith -  cnt  - Count of the array, not in bytes, but number of entries in the arrays
1727580bdb30SBarry Smith 
1728580bdb30SBarry Smith    Output Parameters:
172987497f52SBarry Smith .   e - `PETSC_TRUE` if equal else `PETSC_FALSE`.
1730580bdb30SBarry Smith 
1731580bdb30SBarry Smith    Level: intermediate
1732580bdb30SBarry Smith 
173387497f52SBarry Smith    Notes:
173487497f52SBarry Smith    This routine is a preferred replacement to `PetscMemcmp()`
173587497f52SBarry Smith 
1736580bdb30SBarry Smith    The arrays must be of the same type
1737580bdb30SBarry Smith 
1738db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`,
1739db781477SPatrick Sanan           `PetscArraymove()`
1740580bdb30SBarry Smith M*/
17419e2232c7SLisandro Dalcin #define  PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e))
1742580bdb30SBarry Smith 
17438f8f2f0dSBarry Smith /*MC
174487497f52SBarry Smith    PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use `PetscArraycpy()` when the arrays
1745580bdb30SBarry Smith                     do not overlap
1746580bdb30SBarry Smith 
1747580bdb30SBarry Smith    Synopsis:
1748580bdb30SBarry Smith     #include <petscsys.h>
1749580bdb30SBarry Smith     PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt)
1750580bdb30SBarry Smith 
1751580bdb30SBarry Smith    Not Collective
1752580bdb30SBarry Smith 
1753580bdb30SBarry Smith    Input Parameters:
1754580bdb30SBarry Smith +  str1 - First array
1755580bdb30SBarry Smith .  str2 - Second array
1756580bdb30SBarry Smith -  cnt  - Count of the array, not in bytes, but number of entries in the arrays
1757580bdb30SBarry Smith 
1758580bdb30SBarry Smith    Level: intermediate
1759580bdb30SBarry Smith 
176087497f52SBarry Smith    Notes:
176187497f52SBarry Smith    This routine is a preferred replacement to `PetscMemmove()`
176287497f52SBarry Smith 
1763580bdb30SBarry Smith    The arrays must be of the same type
1764580bdb30SBarry Smith 
1765db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()`
1766580bdb30SBarry Smith M*/
17679e2232c7SLisandro Dalcin #define  PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1))))
1768580bdb30SBarry Smith 
17698f8f2f0dSBarry Smith /*MC
1770580bdb30SBarry Smith    PetscArraycpy - Copies from one array in memory to another
1771580bdb30SBarry Smith 
1772580bdb30SBarry Smith    Synopsis:
1773580bdb30SBarry Smith     #include <petscsys.h>
1774580bdb30SBarry Smith     PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt)
1775580bdb30SBarry Smith 
1776580bdb30SBarry Smith    Not Collective
1777580bdb30SBarry Smith 
1778580bdb30SBarry Smith    Input Parameters:
1779de25709eSStefano Zampini +  str1 - First array (destination)
1780de25709eSStefano Zampini .  str2 - Second array (source)
1781580bdb30SBarry Smith -  cnt  - Count of the array, not in bytes, but number of entries in the arrays
1782580bdb30SBarry Smith 
1783580bdb30SBarry Smith    Level: intermediate
1784580bdb30SBarry Smith 
178587497f52SBarry Smith    Notes:
178687497f52SBarry Smith    This routine is a preferred replacement to `PetscMemcpy()`
178787497f52SBarry Smith 
1788580bdb30SBarry Smith    The arrays must be of the same type
1789580bdb30SBarry Smith 
1790db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraymove()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()`
1791580bdb30SBarry Smith M*/
17929e2232c7SLisandro Dalcin #define  PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1))))
1793580bdb30SBarry Smith 
17948f8f2f0dSBarry Smith /*MC
1795580bdb30SBarry Smith    PetscArrayzero - Zeros an array in memory.
1796580bdb30SBarry Smith 
1797580bdb30SBarry Smith    Synopsis:
1798580bdb30SBarry Smith     #include <petscsys.h>
1799580bdb30SBarry Smith     PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt)
1800580bdb30SBarry Smith 
1801580bdb30SBarry Smith    Not Collective
1802580bdb30SBarry Smith 
1803580bdb30SBarry Smith    Input Parameters:
1804580bdb30SBarry Smith +  str1 - array
1805580bdb30SBarry Smith -  cnt  - Count of the array, not in bytes, but number of entries in the array
1806580bdb30SBarry Smith 
1807580bdb30SBarry Smith    Level: intermediate
1808580bdb30SBarry Smith 
1809580bdb30SBarry Smith    Note:
181087497f52SBarry Smith    This routine is a preferred replacement to `PetscMemzero()`
1811580bdb30SBarry Smith 
1812db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, `PetscArraymove()`
1813580bdb30SBarry Smith M*/
18149e2232c7SLisandro Dalcin #define  PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1)))
1815580bdb30SBarry Smith 
1816d382aafbSBarry Smith /*MC
1817d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1818d382aafbSBarry Smith 
1819eca87e8dSBarry Smith    Synopsis:
1820aaa7dc30SBarry Smith     #include <petscsys.h>
1821eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1822eca87e8dSBarry Smith 
1823d382aafbSBarry Smith    Not Collective
1824d382aafbSBarry Smith 
1825d382aafbSBarry Smith    Input Parameters:
1826d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1827d382aafbSBarry Smith .  n - number of elements to fetch
1828d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
182950d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1830d382aafbSBarry Smith 
1831d382aafbSBarry Smith    Level: developer
1832d382aafbSBarry Smith 
1833d382aafbSBarry Smith    Notes:
1834d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1835d382aafbSBarry Smith 
183650d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
183750d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
183887497f52SBarry Smith +  `PETSC_PREFETCH_HINT_NTA` - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
183987497f52SBarry Smith .  `PETSC_PREFETCH_HINT_T0` - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
184087497f52SBarry Smith .  `PETSC_PREFETCH_HINT_T1` - Fetch to level 2 and higher (not L1).
184187497f52SBarry Smith -  `PETSC_PREFETCH_HINT_T2` - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1842d382aafbSBarry Smith 
1843d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1844d382aafbSBarry Smith    address).
1845d382aafbSBarry Smith 
1846d382aafbSBarry Smith M*/
1847d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1848d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1849d382aafbSBarry Smith     for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1850d382aafbSBarry Smith   } while (0)
1851d382aafbSBarry Smith 
1852d382aafbSBarry Smith /*
1853d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1854d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1855d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1856d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1857e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1858d382aafbSBarry Smith */
1859d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1860d382aafbSBarry Smith 
1861d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1862d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1863d382aafbSBarry Smith #endif
1864d382aafbSBarry Smith 
18655a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18665a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1867d382aafbSBarry Smith #endif
1868d382aafbSBarry Smith 
1869d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1870d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1871d382aafbSBarry Smith #endif
1872d382aafbSBarry Smith 
1873d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1874d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1875d382aafbSBarry Smith #endif
1876d382aafbSBarry Smith 
1877d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1878d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1879d382aafbSBarry Smith #endif
1880d382aafbSBarry Smith 
1881d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1882d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1883d382aafbSBarry Smith #endif
1884d382aafbSBarry Smith 
1885d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1886d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1887d382aafbSBarry Smith #endif
1888d382aafbSBarry Smith 
1889d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1890d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1891d382aafbSBarry Smith #endif
1892d382aafbSBarry Smith 
1893d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1894d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1895d382aafbSBarry Smith #endif
1896d382aafbSBarry Smith 
1897d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1898d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1899d382aafbSBarry Smith #endif
1900d382aafbSBarry Smith 
1901d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1902d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1903d382aafbSBarry Smith #endif
1904d382aafbSBarry Smith 
1905d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1906d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1907d382aafbSBarry Smith #endif
1908d382aafbSBarry Smith 
1909d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1910d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1911d382aafbSBarry Smith #endif
1912d382aafbSBarry Smith 
1913d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1914d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1915d382aafbSBarry Smith #endif
1916d382aafbSBarry Smith 
1917d382aafbSBarry Smith #endif
1918d382aafbSBarry Smith 
1919d382aafbSBarry Smith /*
1920d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1921d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1922d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1923d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1924d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1925d382aafbSBarry Smith */
1926d382aafbSBarry Smith #if defined(__cplusplus)
1927d382aafbSBarry Smith #  define EXTERN_C_BEGIN extern "C" {
1928d382aafbSBarry Smith #  define EXTERN_C_END }
1929d382aafbSBarry Smith #else
1930d382aafbSBarry Smith #  define EXTERN_C_BEGIN
1931d382aafbSBarry Smith #  define EXTERN_C_END
1932d382aafbSBarry Smith #endif
1933d382aafbSBarry Smith 
1934d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1935d382aafbSBarry Smith 
1936d382aafbSBarry Smith /*MC
1937d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1938d382aafbSBarry Smith         communication
1939d382aafbSBarry Smith 
1940d382aafbSBarry Smith    Level: beginner
1941d382aafbSBarry Smith 
1942d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1943d382aafbSBarry Smith 
1944db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`, `PETSC_COMM_SELF`
1945d382aafbSBarry Smith M*/
1946d382aafbSBarry Smith 
1947d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
1948014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1949014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1950c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1951c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1952c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1953c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1954d382aafbSBarry Smith #endif
1955d382aafbSBarry Smith 
1956d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
1957d382aafbSBarry Smith 
1958d382aafbSBarry Smith /* Limit MPI to 32-bits */
1959d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
1960d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
1961d382aafbSBarry Smith /* Limit BLAS to 32-bits */
1962d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
1963d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
1964eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX  2147483647
1965d382aafbSBarry Smith 
196661b0d812SBarry Smith /*@C
196787497f52SBarry Smith     PetscIntCast - casts a `PetscInt64` (which is 64 bits in size) to a `PetscInt` (which may be 32 bits in size), generates an
196887497f52SBarry Smith          error if the `PetscInt` is not large enough to hold the number.
1969c73702f5SBarry Smith 
1970c73702f5SBarry Smith    Not Collective
1971c73702f5SBarry Smith 
1972c73702f5SBarry Smith    Input Parameter:
197387497f52SBarry Smith .     a - the `PetscInt64` value
1974c73702f5SBarry Smith 
1975c73702f5SBarry Smith    Output Parameter:
197687497f52SBarry Smith .     b - the resulting `PetscInt` value
1977c73702f5SBarry Smith 
1978c73702f5SBarry Smith    Level: advanced
1979c73702f5SBarry Smith 
198087497f52SBarry Smith    Notes:
198187497f52SBarry Smith    If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make `PetscInt` use 64 bit ints
1982c73702f5SBarry Smith 
1983c73702f5SBarry Smith    Not available from Fortran
1984c73702f5SBarry Smith 
1985db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`
1986c73702f5SBarry Smith @*/
19879fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b)
1988c73702f5SBarry Smith {
1989c73702f5SBarry Smith   PetscFunctionBegin;
1990c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES)
19913ca90d2dSJacob Faibussowitsch   if (a > PETSC_MAX_INT) {
19923ca90d2dSJacob Faibussowitsch     *b = 0;
199398921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a);
19943ca90d2dSJacob Faibussowitsch   }
1995c73702f5SBarry Smith #endif
1996c73702f5SBarry Smith   *b = (PetscInt)(a);
1997c73702f5SBarry Smith   PetscFunctionReturn(0);
1998c73702f5SBarry Smith }
1999c73702f5SBarry Smith 
2000c73702f5SBarry Smith /*@C
200187497f52SBarry Smith     PetscCountCast - casts a `PetscCount` to a `PetscInt` (which may be 32 bits in size), generates an
200287497f52SBarry Smith          error if the `PetscInt` is not large enough to hold the number.
2003981bb840SJunchao Zhang 
2004981bb840SJunchao Zhang    Not Collective
2005981bb840SJunchao Zhang 
2006981bb840SJunchao Zhang    Input Parameter:
200787497f52SBarry Smith .     a - the `PetscCount` value
2008981bb840SJunchao Zhang 
2009981bb840SJunchao Zhang    Output Parameter:
201087497f52SBarry Smith .     b - the resulting `PetscInt` value
2011981bb840SJunchao Zhang 
2012981bb840SJunchao Zhang    Level: advanced
2013981bb840SJunchao Zhang 
2014981bb840SJunchao Zhang    Notes:
2015981bb840SJunchao Zhang      If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints
2016981bb840SJunchao Zhang 
2017981bb840SJunchao Zhang    Not available from Fortran
2018981bb840SJunchao Zhang 
2019db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`, `PetscIntCast()`
2020981bb840SJunchao Zhang @*/
2021981bb840SJunchao Zhang static inline PetscErrorCode PetscCountCast(PetscCount a,PetscInt *b)
2022981bb840SJunchao Zhang {
2023981bb840SJunchao Zhang   PetscFunctionBegin;
2024981bb840SJunchao Zhang   if (sizeof(PetscCount) > sizeof(PetscInt) && a > PETSC_MAX_INT) {
2025981bb840SJunchao Zhang     *b = 0;
2026981bb840SJunchao Zhang     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a);
2027981bb840SJunchao Zhang   }
2028981bb840SJunchao Zhang   *b = (PetscInt)(a);
2029981bb840SJunchao Zhang   PetscFunctionReturn(0);
2030981bb840SJunchao Zhang }
2031981bb840SJunchao Zhang 
2032981bb840SJunchao Zhang /*@C
203387497f52SBarry Smith     PetscBLASIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscBLASInt` (which may be 32 bits in size), generates an
203487497f52SBarry Smith          error if the `PetscBLASInt` is not large enough to hold the number.
203561b0d812SBarry Smith 
203661b0d812SBarry Smith    Not Collective
203761b0d812SBarry Smith 
203861b0d812SBarry Smith    Input Parameter:
203987497f52SBarry Smith .     a - the `PetscInt` value
204061b0d812SBarry Smith 
204161b0d812SBarry Smith    Output Parameter:
204287497f52SBarry Smith .     b - the resulting `PetscBLASInt` value
204361b0d812SBarry Smith 
204461b0d812SBarry Smith    Level: advanced
204561b0d812SBarry Smith 
20460bc7d38cSBarry Smith    Notes:
20471fd49c25SBarry Smith    Not available from Fortran
204887497f52SBarry Smith 
2049f0b7f91aSBarry Smith    Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs
20501fd49c25SBarry Smith 
2051db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscIntCast()`, `PetscCountCast()`
205261b0d812SBarry Smith @*/
20539fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b)
2054c5df96a5SBarry Smith {
2055c5df96a5SBarry Smith   PetscFunctionBegin;
205654c59aa7SJacob Faibussowitsch   *b = 0;
205754c59aa7SJacob Faibussowitsch   if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) {
205854c59aa7SJacob Faibussowitsch     PetscCheck(a <= PETSC_BLAS_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running",a);
205954c59aa7SJacob Faibussowitsch   }
206054c59aa7SJacob Faibussowitsch   PetscCheck(a >= 0,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine");
2061c73702f5SBarry Smith   *b = (PetscBLASInt)(a);
2062c5df96a5SBarry Smith   PetscFunctionReturn(0);
2063c5df96a5SBarry Smith }
2064c5df96a5SBarry Smith 
206561b0d812SBarry Smith /*@C
206687497f52SBarry Smith     PetscCuBLASIntCast - like `PetscBLASIntCast()`, but for `PetscCuBLASInt`.
2067eee0c0a6SToby Isaac 
2068eee0c0a6SToby Isaac    Not Collective
2069eee0c0a6SToby Isaac 
2070eee0c0a6SToby Isaac    Input Parameter:
207187497f52SBarry Smith .     a - the `PetscInt` value
2072eee0c0a6SToby Isaac 
2073eee0c0a6SToby Isaac    Output Parameter:
207487497f52SBarry Smith .     b - the resulting `PetscCuBLASInt` value
2075eee0c0a6SToby Isaac 
2076eee0c0a6SToby Isaac    Level: advanced
2077eee0c0a6SToby Isaac 
2078eee0c0a6SToby Isaac    Notes:
2079eee0c0a6SToby Isaac       Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs
2080eee0c0a6SToby Isaac 
2081db781477SPatrick Sanan .seealso: `PetscCuBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()`
2082eee0c0a6SToby Isaac @*/
20839fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscCuBLASInt *b)
2084eee0c0a6SToby Isaac {
2085eee0c0a6SToby Isaac   PetscFunctionBegin;
208654c59aa7SJacob Faibussowitsch   *b = 0;
208754c59aa7SJacob Faibussowitsch   if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_CUBLAS_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32 bit integers.",a);
208854c59aa7SJacob Faibussowitsch   PetscCheck(a >= 0,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine");
2089eee0c0a6SToby Isaac   *b = (PetscCuBLASInt)(a);
2090eee0c0a6SToby Isaac   PetscFunctionReturn(0);
2091eee0c0a6SToby Isaac }
2092eee0c0a6SToby Isaac 
2093eee0c0a6SToby Isaac /*@C
209487497f52SBarry Smith     PetscMPIIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscMPIInt` (which may be 32 bits in size), generates an
209587497f52SBarry Smith          error if the `PetscMPIInt` is not large enough to hold the number.
209661b0d812SBarry Smith 
209761b0d812SBarry Smith    Not Collective
209861b0d812SBarry Smith 
209961b0d812SBarry Smith    Input Parameter:
210087497f52SBarry Smith .     a - the `PetscInt` value
210161b0d812SBarry Smith 
210261b0d812SBarry Smith    Output Parameter:
210387497f52SBarry Smith .     b - the resulting `PetscMPIInt` value
210461b0d812SBarry Smith 
210561b0d812SBarry Smith    Level: advanced
210661b0d812SBarry Smith 
21071fd49c25SBarry Smith    Not available from Fortran
21081fd49c25SBarry Smith 
2109db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntCast()`
211061b0d812SBarry Smith @*/
21119fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b)
21124dc2109aSBarry Smith {
21134dc2109aSBarry Smith   PetscFunctionBegin;
211454c59aa7SJacob Faibussowitsch   *b = 0;
211554c59aa7SJacob Faibussowitsch   if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_MPI_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for MPI buffer length. We currently only support 32 bit integers",a);
2116c73702f5SBarry Smith   *b = (PetscMPIInt)(a);
21174dc2109aSBarry Smith   PetscFunctionReturn(0);
21184dc2109aSBarry Smith }
21194dc2109aSBarry Smith 
2120bafee8b4SSatish Balay #define PetscInt64Mult(a,b)   ((PetscInt64)(a))*((PetscInt64)(b))
21212f18eb33SBarry Smith 
21222f18eb33SBarry Smith /*@C
21232f18eb33SBarry Smith 
212487497f52SBarry Smith    PetscRealIntMultTruncate - Computes the product of a positive `PetscReal` and a positive `PetscInt` and truncates the value to slightly less than the maximal possible value
21252f18eb33SBarry Smith 
21262f18eb33SBarry Smith    Not Collective
21272f18eb33SBarry Smith 
2128d8d19677SJose E. Roman    Input Parameters:
212987497f52SBarry Smith +     a - the `PetscReal` value
21302f18eb33SBarry Smith -     b - the second value
21312f18eb33SBarry Smith 
2132390e1bf2SBarry Smith    Returns:
213387497f52SBarry Smith       the result as a `PetscInt` value
21342f18eb33SBarry Smith 
213587497f52SBarry Smith    Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64`
213687497f52SBarry Smith    Use `PetscIntMultTruncate()` to compute the product of two positive `PetscInt` and truncate to fit a `PetscInt`
213787497f52SBarry Smith    Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt`
21382f18eb33SBarry Smith 
2139e28ce29aSPatrick Sanan    Developers Note:
214087497f52SBarry Smith    We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks.
21412f18eb33SBarry Smith 
21422f18eb33SBarry Smith    This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
21432f18eb33SBarry Smith 
21441fd49c25SBarry Smith    Not available from Fortran
21451fd49c25SBarry Smith 
21462f18eb33SBarry Smith    Level: advanced
21472f18eb33SBarry Smith 
2148db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()`
21492f18eb33SBarry Smith @*/
21509fbee547SJacob Faibussowitsch static inline PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b)
21512f18eb33SBarry Smith {
21525f80ce2aSJacob Faibussowitsch   PetscInt64 r = (PetscInt64)(a*(PetscReal)b);
21532f18eb33SBarry Smith   if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
21542f18eb33SBarry Smith   return (PetscInt)r;
21552f18eb33SBarry Smith }
21562f18eb33SBarry Smith 
21572f18eb33SBarry Smith /*@C
21582f18eb33SBarry Smith 
215987497f52SBarry Smith    PetscIntMultTruncate - Computes the product of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value
21602f18eb33SBarry Smith 
21612f18eb33SBarry Smith    Not Collective
21622f18eb33SBarry Smith 
2163d8d19677SJose E. Roman    Input Parameters:
21642f18eb33SBarry Smith +     a - the PetscInt value
21652f18eb33SBarry Smith -     b - the second value
21662f18eb33SBarry Smith 
2167390e1bf2SBarry Smith    Returns:
216887497f52SBarry Smith       the result as a `PetscInt` value
21692f18eb33SBarry Smith 
217087497f52SBarry Smith    Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64`
217187497f52SBarry Smith    Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt`
217287497f52SBarry Smith    Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt`
21732f18eb33SBarry Smith 
21741fd49c25SBarry Smith    Not available from Fortran
21751fd49c25SBarry Smith 
217687497f52SBarry Smith    Developers Note:
217787497f52SBarry Smith    We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks.
21782f18eb33SBarry Smith 
21792f18eb33SBarry Smith    This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
21802f18eb33SBarry Smith 
21812f18eb33SBarry Smith    Level: advanced
21822f18eb33SBarry Smith 
2183db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()`
21842f18eb33SBarry Smith @*/
21859fbee547SJacob Faibussowitsch static inline PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b)
21862f18eb33SBarry Smith {
21875f80ce2aSJacob Faibussowitsch   PetscInt64 r = PetscInt64Mult(a,b);
21882f18eb33SBarry Smith   if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
21892f18eb33SBarry Smith   return (PetscInt)r;
21902f18eb33SBarry Smith }
21912f18eb33SBarry Smith 
2192f91af8c7SBarry Smith /*@C
2193f91af8c7SBarry Smith 
219487497f52SBarry Smith    PetscIntSumTruncate - Computes the sum of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value
2195f91af8c7SBarry Smith 
2196f91af8c7SBarry Smith    Not Collective
2197f91af8c7SBarry Smith 
2198d8d19677SJose E. Roman    Input Parameters:
219987497f52SBarry Smith +     a - the `PetscInt` value
2200f91af8c7SBarry Smith -     b - the second value
2201f91af8c7SBarry Smith 
2202390e1bf2SBarry Smith    Returns:
220387497f52SBarry Smith      the result as a `PetscInt` value
2204f91af8c7SBarry Smith 
220587497f52SBarry Smith    Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64`
220687497f52SBarry Smith    Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt`
220787497f52SBarry Smith    Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt`
2208f91af8c7SBarry Smith 
2209f91af8c7SBarry Smith    This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
2210f91af8c7SBarry Smith 
2211f5f57ec0SBarry Smith    Not available from Fortran
2212f5f57ec0SBarry Smith 
2213f91af8c7SBarry Smith    Level: advanced
2214f91af8c7SBarry Smith 
2215db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`
2216f91af8c7SBarry Smith @*/
22179fbee547SJacob Faibussowitsch static inline PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b)
2218f91af8c7SBarry Smith {
22195f80ce2aSJacob Faibussowitsch   PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b);
2220f91af8c7SBarry Smith   if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
2221f91af8c7SBarry Smith   return (PetscInt)r;
2222f91af8c7SBarry Smith }
2223f91af8c7SBarry Smith 
22242f18eb33SBarry Smith /*@C
22252f18eb33SBarry Smith 
222687497f52SBarry Smith    PetscIntMultError - Computes the product of two positive `PetscInt` and generates an error with overflow.
22272f18eb33SBarry Smith 
22282f18eb33SBarry Smith    Not Collective
22292f18eb33SBarry Smith 
2230d8d19677SJose E. Roman    Input Parameters:
223187497f52SBarry Smith +     a - the `PetscInt` value
22322f18eb33SBarry Smith -     b - the second value
22332f18eb33SBarry Smith 
2234d8d19677SJose E. Roman    Output Parameter:
223587497f52SBarry Smith .     result - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows
22362f18eb33SBarry Smith 
223787497f52SBarry Smith    Use `PetscInt64Mult()` to compute the product of two `PetscInt` and store in a `PetscInt64`
223887497f52SBarry Smith    Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt`
22392f18eb33SBarry Smith 
2240f5f57ec0SBarry Smith    Not available from Fortran
2241f5f57ec0SBarry Smith 
224287497f52SBarry Smith    Developers Note:
224387497f52SBarry Smith    We currently assume that `PetscInt` addition does not overflow, this is obviously wrong but requires many more checks.
22442f18eb33SBarry Smith 
22452f18eb33SBarry Smith    Level: advanced
22462f18eb33SBarry Smith 
2247db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntMult64()`, `PetscIntSumError()`
22482f18eb33SBarry Smith @*/
22499fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result)
22502f18eb33SBarry Smith {
2251bafee8b4SSatish Balay   PetscInt64 r;
22522f18eb33SBarry Smith 
22532f18eb33SBarry Smith   PetscFunctionBegin;
2254bafee8b4SSatish Balay   r = PetscInt64Mult(a,b);
22552f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES)
22562c71b3e2SJacob Faibussowitsch   PetscCheck(r <= PETSC_MAX_INT,PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b);
22572f18eb33SBarry Smith #endif
2258f91af8c7SBarry Smith   if (result) *result = (PetscInt)r;
2259f91af8c7SBarry Smith   PetscFunctionReturn(0);
2260f91af8c7SBarry Smith }
2261f91af8c7SBarry Smith 
2262f91af8c7SBarry Smith /*@C
2263f91af8c7SBarry Smith 
226487497f52SBarry Smith    PetscIntSumError - Computes the sum of two positive `PetscInt` and generates an error with overflow.
2265f91af8c7SBarry Smith 
2266f91af8c7SBarry Smith    Not Collective
2267f91af8c7SBarry Smith 
2268d8d19677SJose E. Roman    Input Parameters:
226987497f52SBarry Smith +     a - the `PetscInt` value
2270f91af8c7SBarry Smith -     b - the second value
2271f91af8c7SBarry Smith 
2272d8d19677SJose E. Roman    Output Parameter:
227387497f52SBarry Smith .     c - the result as a `PetscInt` value,  or NULL if you do not want the result, you just want to check if it overflows
2274f91af8c7SBarry Smith 
227587497f52SBarry Smith    Use `PetscInt64Mult()` to compute the product of two 32 bit PetscInt and store in a `PetscInt64`
227687497f52SBarry Smith    Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt`
2277f91af8c7SBarry Smith 
2278f5f57ec0SBarry Smith    Not available from Fortran
2279f5f57ec0SBarry Smith 
2280f91af8c7SBarry Smith    Level: advanced
2281f91af8c7SBarry Smith 
2282db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`
2283f91af8c7SBarry Smith @*/
22849fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result)
2285f91af8c7SBarry Smith {
2286bafee8b4SSatish Balay   PetscInt64 r;
2287f91af8c7SBarry Smith 
2288f91af8c7SBarry Smith   PetscFunctionBegin;
2289bafee8b4SSatish Balay   r  =  ((PetscInt64)a) + ((PetscInt64)b);
2290f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES)
22912c71b3e2SJacob Faibussowitsch   PetscCheck(r <= PETSC_MAX_INT,PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b);
2292f91af8c7SBarry Smith #endif
2293f91af8c7SBarry Smith   if (result) *result = (PetscInt) r;
22942f18eb33SBarry Smith   PetscFunctionReturn(0);
22952f18eb33SBarry Smith }
2296c5df96a5SBarry Smith 
2297d382aafbSBarry Smith /*
22982981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2299d382aafbSBarry Smith */
2300d382aafbSBarry Smith #if defined(hz)
2301d382aafbSBarry Smith #  undef hz
2302d382aafbSBarry Smith #endif
2303d382aafbSBarry Smith 
230415a5570dSLisandro Dalcin #include <limits.h>
230515a5570dSLisandro Dalcin 
230615a5570dSLisandro Dalcin /* The number of bits in a byte */
230715a5570dSLisandro Dalcin 
230815a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT
230915a5570dSLisandro Dalcin 
2310d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2311d382aafbSBarry Smith #  include <sys/types.h>
2312d382aafbSBarry Smith #endif
2313d382aafbSBarry Smith 
2314d382aafbSBarry Smith /*MC
2315d382aafbSBarry Smith 
231666d79e26SBarry Smith     PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++
231766d79e26SBarry Smith                     and Fortran compilers when petscsys.h is included.
231866d79e26SBarry Smith 
231966d79e26SBarry Smith     The current PETSc version and the API for accessing it are defined in petscversion.h
232066d79e26SBarry Smith 
232166d79e26SBarry Smith     The complete version number is given as the triple  PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z)
232266d79e26SBarry Smith 
232366d79e26SBarry Smith     A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention
232466d79e26SBarry Smith     where only a change in the major version number (x) indicates a change in the API.
232566d79e26SBarry Smith 
232666d79e26SBarry Smith     A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w
232766d79e26SBarry Smith 
232866d79e26SBarry Smith     Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z),
232966d79e26SBarry Smith     PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given
233066d79e26SBarry Smith     version number (x.y.z).
233166d79e26SBarry Smith 
233287497f52SBarry Smith     `PETSC_RELEASE_DATE` is the date the x.y version was released (i.e. the version before any patch releases)
233366d79e26SBarry Smith 
233487497f52SBarry Smith     `PETSC_VERSION_DATE` is the date the x.y.z version was released
233566d79e26SBarry Smith 
233687497f52SBarry Smith     `PETSC_VERSION_GIT` is the last git commit to the repository given in the form vx.y.z-wwwww
233766d79e26SBarry Smith 
233887497f52SBarry Smith     `PETSC_VERSION_DATE_GIT` is the date of the last git commit to the repository
233966d79e26SBarry Smith 
234087497f52SBarry Smith     `PETSC_VERSION_()` is deprecated and will eventually be removed.
234166d79e26SBarry Smith 
2342cbc12506SBarry Smith     Level: intermediate
234366d79e26SBarry Smith 
234466d79e26SBarry Smith M*/
234566d79e26SBarry Smith 
2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
235227710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t);
23535f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*);
2354d382aafbSBarry Smith 
23556a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*);
23566a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*);
23576a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*);
2358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2359ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]);
236022ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]);
2361b6a18d21SVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedCheckDupsInt(PetscInt,const PetscInt[],PetscBool*);
2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
2363f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*);
236460e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*);
2365d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*);
2366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2369981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount,PetscInt[],PetscCount[]);
23706c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]);
2371981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount,PetscInt[],PetscInt[],PetscCount[]);
237217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]);
237317d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]);
2374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
23755569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]);
2376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
237717df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*);
2378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
237939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]);
2380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2381745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]);
238239f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*);
2383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
23866c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**);
23876c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**);
2388e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**);
2389ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *);
2390ce605777SToby Isaac 
23914d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*);
2392676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]);
2393676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]);
2394676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]);
23954d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*);
2396676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]);
2397676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]);
2398676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]);
2399676f2a66SJacob Faibussowitsch 
2400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2402d382aafbSBarry Smith 
240376bdecfbSBarry Smith /*J
2404d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2405d382aafbSBarry Smith 
2406d382aafbSBarry Smith    Level: beginner
2407d382aafbSBarry Smith 
2408e28ce29aSPatrick Sanan    Notes:
240987497f52SBarry Smith    To use `PETSCSPRNG` or `PETSCRANDOM123` you must have ./configure PETSc
241025ccb61fSToby Isaac    with the option --download-sprng or --download-random123
2411d382aafbSBarry Smith 
2412db781477SPatrick Sanan .seealso: `PetscRandomSetType()`, `PetscRandom`, `PetscRandomCreate()`
241376bdecfbSBarry Smith J*/
241419fd82e9SBarry Smith typedef const char* PetscRandomType;
2415d382aafbSBarry Smith #define PETSCRAND       "rand"
2416d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2417d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2418c5e4d11fSDmitry Karpeev #define PETSCRANDER48   "rander48"
241925ccb61fSToby Isaac #define PETSCRANDOM123  "random123"
2420808ba619SStefano Zampini #define PETSCCURAND     "curand"
2421d382aafbSBarry Smith 
2422d382aafbSBarry Smith /* Logging support */
2423014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2424d382aafbSBarry Smith 
2425607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void);
2426d382aafbSBarry Smith 
2427d382aafbSBarry Smith /* Dynamic creation and loading functions */
2428140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList;
2429d382aafbSBarry Smith 
2430bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom));
243119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType);
2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
243319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*);
2434fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]);
2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2436d382aafbSBarry Smith 
2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2440808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*);
2441808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*);
2442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2448d382aafbSBarry Smith 
2449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
245697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]);
24578a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]);
245897540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]);
2459d382aafbSBarry Smith 
24609fbee547SJacob Faibussowitsch static inline PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;}
246130815ce0SLisandro Dalcin 
24629860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType);
24639860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType);
2464f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType);
2465f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType);
2466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool  *);
2469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2473c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER)
2474e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*);
2475c891a504SStefano Zampini #endif
2476d382aafbSBarry Smith 
2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2480d382aafbSBarry Smith 
2481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool);
2483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
24872a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void);
2488d382aafbSBarry Smith 
2489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2494cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*)
2495cf4b5b4fSJed Brown   PetscAttrMPIPointerWithType(6,3);
2496d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt,
2497d815da10SJed Brown                                                     PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*),
2498d815da10SJed Brown                                                     PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx)
2499d815da10SJed Brown   PetscAttrMPIPointerWithType(6,3);
25006afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt,
25016afbe7ddSJed Brown                                                        MPI_Request**,MPI_Request**,
25026afbe7ddSJed Brown                                                        PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*),
25036afbe7ddSJed Brown                                                        PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx)
25046afbe7ddSJed Brown   PetscAttrMPIPointerWithType(6,3);
2505d382aafbSBarry Smith 
25066145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[];
25076145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType);
25086145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*);
25096145cd65SJed Brown 
2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*);
2511d382aafbSBarry Smith 
2512ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject);
2513ce94432eSBarry Smith 
251445487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[];
251545487dadSJed Brown 
2516d382aafbSBarry Smith struct _n_PetscSubcomm {
2517d382aafbSBarry Smith   MPI_Comm         parent;           /* parent communicator */
2518d382aafbSBarry Smith   MPI_Comm         dupparent;        /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2519306c2d5bSBarry Smith   MPI_Comm         child;            /* the sub-communicator */
252045487dadSJed Brown   PetscMPIInt      n;                /* num of subcommunicators under the parent communicator */
252145487dadSJed Brown   PetscMPIInt      color;            /* color of processors belong to this communicator */
2522708d824cSJed Brown   PetscMPIInt      *subsize;         /* size of subcommunicator[color] */
252345487dadSJed Brown   PetscSubcommType type;
2524e5acf8a4SHong Zhang   char             *subcommprefix;
2525d382aafbSBarry Smith };
2526d382aafbSBarry Smith 
25279fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;}
25289fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;}
25299fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;}
2530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
253465d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt);
2535053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer);
2536f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm);
2537e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]);
2538a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*);
2539a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*);
2540a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*);
2541d382aafbSBarry Smith 
25429962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*);
25439962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt);
25449962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*);
25459962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*);
25469962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt);
25479962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap);
25489962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*);
25499962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer);
25509962606eSBarry Smith 
25515e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer);
25525f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*);
25535f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*);
25545f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*);
25555f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*);
25565e71baefSBarry Smith 
2557a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */
2558a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*);
2559a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*);
2560a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*);
2561a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl);
2562a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl);
2563a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl);
2564a32e93adSJunchao Zhang 
256513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*);
25660f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*);
256713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*);
2568137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*);
2569137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*);
2570137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*);
257113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*);
257213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t);
25730f453b92SJed Brown 
2574471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling
2575471ecdacSJed Brown  * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as
2576471ecdacSJed Brown  * possible. */
25779fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);}
2578d382aafbSBarry Smith 
25799de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton;
25809de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*);
25819de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*);
25829de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*);
25839de0f6ecSBarry Smith 
2584ace2fbaeSBarry Smith #include <stdarg.h>
2585ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
2586ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list);
2587ace2fbaeSBarry Smith 
2588268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList;
2589fbfcfee5SBarry Smith 
25901f817a21SBarry Smith /*@C
25911f817a21SBarry Smith       PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code.
25921f817a21SBarry Smith 
259387497f52SBarry Smith      Not Collective - only what is registered on rank 0 of `PETSC_COMM_WORLD` will be printed
25941f817a21SBarry Smith 
25951f817a21SBarry Smith      Input Parameters:
25961f817a21SBarry Smith +      cite - the bibtex item, formated to displayed on multiple lines nicely
259787497f52SBarry Smith -      set - a boolean variable initially set to `PETSC_FALSE`; this is used to insure only a single registration of the citation
25981f817a21SBarry Smith 
2599850545d0SSatish Balay    Level: intermediate
2600850545d0SSatish Balay 
2601f5f57ec0SBarry Smith    Not available from Fortran
2602f5f57ec0SBarry Smith 
26031f817a21SBarry Smith      Options Database:
2604063414e0SPatrick Sanan .     -citations [filename]   - print out the bibtex entries for the given computation
26051f817a21SBarry Smith @*/
26069fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set)
2607dff31646SBarry Smith {
2608dff31646SBarry Smith   size_t  len;
2609dff31646SBarry Smith   char   *vstring;
2610dff31646SBarry Smith 
26111f817a21SBarry Smith   PetscFunctionBegin;
26128d3683fcSBarry Smith   if (set && *set) PetscFunctionReturn(0);
26139566063dSJacob Faibussowitsch   PetscCall(PetscStrlen(cit,&len));
26149566063dSJacob Faibussowitsch   PetscCall(PetscSegBufferGet(PetscCitationsList,len,&vstring));
26159566063dSJacob Faibussowitsch   PetscCall(PetscArraycpy(vstring,cit,len));
2616dff31646SBarry Smith   if (set) *set = PETSC_TRUE;
26171f817a21SBarry Smith   PetscFunctionReturn(0);
2618dff31646SBarry Smith }
2619dff31646SBarry Smith 
2620d8174014SToby Isaac PETSC_EXTERN PETSC_DEPRECATED_FUNCTION("Google has discontinued its URL shortener service") PetscErrorCode PetscURLShorten(const char [],char [], size_t c);
2621fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t);
2622fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t);
2623f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []);
2624fe278a28SBarry Smith 
2625f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t);
2626f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t);
2627b967cddfSBarry Smith 
26289f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t);
26299f4d3c52SBarry Smith 
263004102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*);
2631763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*);
2632dff31646SBarry Smith 
263368e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*);
26345dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t);
2635d382aafbSBarry Smith 
2636b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG)
26379fbee547SJacob Faibussowitsch static inline unsigned int PetscStrHash(const char *str)
2638df05ca09SBarry Smith {
2639df05ca09SBarry Smith   unsigned int c,hash = 5381;
2640df05ca09SBarry Smith 
2641503e1a2cSLisandro Dalcin   while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */
2642df05ca09SBarry Smith   return hash;
2643df05ca09SBarry Smith }
264477a5e07dSBarry Smith 
264577a5e07dSBarry Smith /*MC
264687497f52SBarry Smith    MPIU_Allreduce - a PETSc replacement for `MPI_Allreduce()` that tries to determine if the call from all the MPI ranks occur from the
264787497f52SBarry Smith                     same place in the PETSc code. This helps to detect bugs where different MPI ranks follow different code paths
264887497f52SBarry Smith                     resulting in inconsistent and incorrect calls to `MPI_Allreduce()`.
264977a5e07dSBarry Smith 
2650d083f849SBarry Smith    Collective
265177a5e07dSBarry Smith 
265277a5e07dSBarry Smith    Synopsis:
265377a5e07dSBarry Smith      #include <petscsys.h>
265477a5e07dSBarry Smith      PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm);
265577a5e07dSBarry Smith 
265677a5e07dSBarry Smith    Input Parameters:
2657df05ca09SBarry Smith +  a - pointer to the input data to be reduced
2658df05ca09SBarry Smith .  c - the number of MPI data items in a and b
265987497f52SBarry Smith .  d - the MPI datatype, for example `MPI_INT`
266087497f52SBarry Smith .  e - the MPI operation, for example `MPI_SUM`
2661df05ca09SBarry Smith -  fcomm - the MPI communicator on which the operation occurs
266277a5e07dSBarry Smith 
266377a5e07dSBarry Smith    Output Parameter:
2664df05ca09SBarry Smith .  b - the reduced values
266577a5e07dSBarry Smith 
2666e28ce29aSPatrick Sanan    Notes:
266787497f52SBarry Smith      In optimized mode this directly calls `MPI_Allreduce()`
266877a5e07dSBarry Smith 
2669df05ca09SBarry Smith      This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void.
2670df05ca09SBarry Smith 
267187497f52SBarry Smith      The error code this returns should be checked with `PetscCall()` even though it looks like an MPI function because it always returns PETSc error codes
2672df05ca09SBarry Smith 
267377a5e07dSBarry Smith    Level: developer
267477a5e07dSBarry Smith 
2675db781477SPatrick Sanan .seealso: `MPI_Allreduce()`
267677a5e07dSBarry Smith M*/
26771c2dc1cbSBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) PetscMacroReturnStandard(                           \
2678df05ca09SBarry Smith     PetscMPIInt a_b1[6],a_b2[6];                                                               \
26793ca90d2dSJacob Faibussowitsch     int         _mpiu_allreduce_c_int = (int)c;                                                \
2680df05ca09SBarry Smith     a_b1[0] = -(PetscMPIInt)__LINE__;                          a_b1[1] = -a_b1[0];             \
2681df05ca09SBarry Smith     a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];             \
2682df05ca09SBarry Smith     a_b1[4] = -(PetscMPIInt)(c);                               a_b1[5] = -a_b1[4];             \
26839566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm));                               \
26842c71b3e2SJacob Faibussowitsch     PetscCheck(-a_b2[0] == a_b2[1],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors"); \
26852c71b3e2SJacob Faibussowitsch     PetscCheck(-a_b2[2] == a_b2[3],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors"); \
26862c71b3e2SJacob Faibussowitsch     PetscCheck(-a_b2[4] == a_b2[5],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",_mpiu_allreduce_c_int); \
26879566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Allreduce((a),(b),(c),d,e,(fcomm)));                                         \
26885f80ce2aSJacob Faibussowitsch   )
2689b2566f29SBarry Smith #else
26901c2dc1cbSBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) PetscMacroReturnStandard(PetscCallMPI(MPI_Allreduce((a),(b),(c),d,e,(fcomm))))
2691b2566f29SBarry Smith #endif
2692b2566f29SBarry Smith 
2693b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY)
26948198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*);
26958198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*);
26962f065d89SBarry Smith #endif
26978198064fSBarry Smith 
2698cd88fca5SStefano Zampini /* this is a vile hack */
2699cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI)
2700961fb248SStefano Zampini #if !defined(PETSC_NECMPI_VERSION_MAJOR) ||                              \
2701961fb248SStefano Zampini     !defined(PETSC_NECMPI_VERSION_MINOR) ||                              \
2702961fb248SStefano Zampini     PETSC_NECMPI_VERSION_MAJOR < 2       ||                              \
2703961fb248SStefano Zampini     (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18)
2704cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0);
2705cd88fca5SStefano Zampini #endif
2706961fb248SStefano Zampini #endif
2707cd88fca5SStefano Zampini 
270812801b39SBarry Smith /*
270960fbe2beSVaclav Hapla     List of external packages and queries on it
271060fbe2beSVaclav Hapla */
271160fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode  PetscHasExternalPackage(const char[],PetscBool*);
271260fbe2beSVaclav Hapla 
2713a52b435bSMark Adams /*
2714a52b435bSMark Adams  OpenMP support
2715a52b435bSMark Adams */
2716a52b435bSMark Adams #if defined(_OPENMP)
2717a52b435bSMark Adams #define PetscPragmaOMP(...) _Pragma(PetscStringize(omp __VA_ARGS__))
2718a52b435bSMark Adams #else // no OpenMP so no threads
2719a52b435bSMark Adams #define PetscPragmaOMP(...)
2720a52b435bSMark Adams #endif
2721a52b435bSMark Adams 
2722f1f2ae84SBarry Smith /* this cannot go here because it may be in a different shared library */
2723f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerBegin(void);
2724f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerEnd(void);
2725f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPICommsDestroy(void);
2726d382aafbSBarry Smith #endif
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