1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1720c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 1805035670SJunchao Zhang #define PETSC_HAVE_DEVICE 1905035670SJunchao Zhang #endif 2005035670SJunchao Zhang 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith /* 442c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 45d382aafbSBarry Smith */ 461ec50b02SJed Brown #if defined(__cplusplus) 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 481ec50b02SJed Brown #else 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 501ec50b02SJed Brown #endif 51d382aafbSBarry Smith 52c5e4d11fSDmitry Karpeev /* ========================================================================== */ 53c5e4d11fSDmitry Karpeev /* 54c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 551cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 561cc8b206SBarry Smith file within an extern "C". 57c5e4d11fSDmitry Karpeev */ 58c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 59c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 60c5e4d11fSDmitry Karpeev #endif 61c5e4d11fSDmitry Karpeev 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ed938b00SJed Brown #if defined(__cplusplus) 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 70ed938b00SJed Brown #else 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 72ed938b00SJed Brown #endif 73ed938b00SJed Brown 7458c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7558c433abSLisandro Dalcin 76ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 77014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 78014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8126703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8226703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8326703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 85014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 86014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 88d382aafbSBarry Smith #else 89014dd563SJed Brown # define PETSC_DLLEXPORT 90014dd563SJed Brown # define PETSC_DLLIMPORT 9121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 92014dd563SJed Brown #endif 93014dd563SJed Brown 94014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 96014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 98014dd563SJed Brown #endif 99014dd563SJed Brown 1001cc8b206SBarry Smith /* 1011cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1021cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1031cc8b206SBarry Smith used from C and are always visible in the shared libraries 1041cc8b206SBarry Smith */ 1052c280183SJed Brown #if defined(__cplusplus) 106014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10821f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 109014dd563SJed Brown #else 110014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 111638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1126258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 113d382aafbSBarry Smith #endif 11427710113SBarry Smith 1152c8e378dSBarry Smith #include <petscversion.h> 116a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 117d382aafbSBarry Smith 118d382aafbSBarry Smith /* ========================================================================== */ 119d382aafbSBarry Smith 120d382aafbSBarry Smith /* 121d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 122d382aafbSBarry Smith 123d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 124d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 125d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 126d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 127d382aafbSBarry Smith mpicxx.h directly in their code 128d382aafbSBarry Smith */ 129fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 130d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 131fa9e63e2SJed Brown #endif 132fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 133d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 134fa9e63e2SJed Brown #endif 135e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 136e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 137e771154cSJed Brown #else 1382c8e378dSBarry Smith # include <mpi.h> 139e771154cSJed Brown #endif 14065013866SBarry Smith 1414e1ad211SJed Brown /*MC 1424e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1434e1ad211SJed Brown 1444e1ad211SJed Brown Notes: 1451393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1461393a3abSPatrick Sanan 1474e1ad211SJed Brown Typical usage is within normal code, 1484e1ad211SJed Brown 1494e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1504e1ad211SJed Brown 1514e1ad211SJed Brown but can also be used in the preprocessor, 1524e1ad211SJed Brown 1534e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1544e1ad211SJed Brown $ ... 1554e1ad211SJed Brown $ #else 1564e1ad211SJed Brown 1571393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1584e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1594e1ad211SJed Brown 1601393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1611393a3abSPatrick Sanan 1621393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1631393a3abSPatrick Sanan 1644e1ad211SJed Brown Developer Notes: 1654e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1664e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1674e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1684e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1694e1ad211SJed Brown 1704e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1714e1ad211SJed Brown implementation of variadic macros. 1724e1ad211SJed Brown 1734e1ad211SJed Brown Level: developer 1744e1ad211SJed Brown M*/ 1754e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1764e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1774e1ad211SJed Brown # define PetscDefined_arg_ shift, 1784e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1794e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1804e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1814e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1824e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1834e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1844e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1854e1ad211SJed Brown #endif 1864e1ad211SJed Brown 187d382aafbSBarry Smith /* 188a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 189a7886beaSBarry Smith This usually happens because 190a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 191a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 192a7886beaSBarry Smith */ 193a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 194c9b973beSBarry Smith # if !defined(MPIUNI_H) 195a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 196a7886beaSBarry Smith # endif 19741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 19841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 19941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 20041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 20141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 20241f4af4cSSatish Balay # endif 20341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 20441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 20541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 20641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 20741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 20841f4af4cSSatish Balay # endif 209a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 21041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 211a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 212ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 213a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 214a7886beaSBarry Smith # endif 215a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 216a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 217a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 218ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 219c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 220a7886beaSBarry Smith # endif 221d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 222d97fd468SStefano Zampini # if !defined(MSMPI_VER) 223d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 224d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 225d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 226d97fd468SStefano Zampini # endif 227d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 228d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 229a7886beaSBarry Smith #endif 230a7886beaSBarry Smith 231a7886beaSBarry Smith /* 2322981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 233d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 234d382aafbSBarry Smith */ 235d382aafbSBarry Smith #include <stdio.h> 236d382aafbSBarry Smith 237d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 238d382aafbSBarry Smith #if !defined(MPIAPI) 239d382aafbSBarry Smith #define MPIAPI 240d382aafbSBarry Smith #endif 241d382aafbSBarry Smith 2421cc8b206SBarry Smith /* 2431cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2441cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2451cc8b206SBarry Smith does not match the actual type of the argument being passed in 2461cc8b206SBarry Smith */ 247c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 248894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 249894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2508ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2518ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 252894dd566SJed Brown # endif 253894dd566SJed Brown #endif 254894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 255894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2568ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2578ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 258894dd566SJed Brown #endif 259b3506946SBarry Smith 2605a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 261df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 262e28ce29aSPatrick Sanan 263e28ce29aSPatrick Sanan /*MC 264e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 265e28ce29aSPatrick Sanan 266e28ce29aSPatrick Sanan Notes: 267e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 268e28ce29aSPatrick Sanan 269e28ce29aSPatrick Sanan Level: beginner 270e28ce29aSPatrick Sanan 271e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 272e28ce29aSPatrick Sanan M*/ 273e28ce29aSPatrick Sanan 27437354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 275bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 276a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 277fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 278bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 279a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 280f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 281bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 282a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 283236ed0a3SSatish Balay #else 284bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 285236ed0a3SSatish Balay #endif 286b7b8f77aSBarry Smith 2877cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 288b7b8f77aSBarry Smith 289d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 290bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 291a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 292d382aafbSBarry Smith #else 293d382aafbSBarry Smith # define MPIU_INT MPI_INT 294a05e1a72SSatish Balay # define PetscInt_FMT "d" 295d382aafbSBarry Smith #endif 296d382aafbSBarry Smith 297503cfb0cSBarry Smith /* 298503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 299503cfb0cSBarry Smith */ 300e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 301d382aafbSBarry Smith 302d382aafbSBarry Smith /* 303d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 304d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 305d382aafbSBarry Smith */ 306014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 307d382aafbSBarry Smith 308d382aafbSBarry Smith /* 309d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 310d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 311d382aafbSBarry Smith */ 312014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 313d382aafbSBarry Smith 314d382aafbSBarry Smith /*MC 315d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 316d382aafbSBarry Smith 317d382aafbSBarry Smith Synopsis: 318aaa7dc30SBarry Smith #include <petscsys.h> 319ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 320d382aafbSBarry Smith 321eca87e8dSBarry Smith Not Collective 322eca87e8dSBarry Smith 323d382aafbSBarry Smith Input Parameters: 324d382aafbSBarry Smith . cond - condition or expression 325d382aafbSBarry Smith 326e28ce29aSPatrick Sanan Notes: 327e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 328d382aafbSBarry Smith branch is unlikely. 329d382aafbSBarry Smith 330d382aafbSBarry Smith Level: advanced 331d382aafbSBarry Smith 332cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 333d382aafbSBarry Smith M*/ 334d382aafbSBarry Smith 335d382aafbSBarry Smith /*MC 336d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 337d382aafbSBarry Smith 338d382aafbSBarry Smith Synopsis: 339aaa7dc30SBarry Smith #include <petscsys.h> 34023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 341d382aafbSBarry Smith 342eca87e8dSBarry Smith Not Collective 343eca87e8dSBarry Smith 344d382aafbSBarry Smith Input Parameters: 345d382aafbSBarry Smith . cond - condition or expression 346d382aafbSBarry Smith 347e28ce29aSPatrick Sanan Notes: 348e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 349d382aafbSBarry Smith branch is likely. 350d382aafbSBarry Smith 351d382aafbSBarry Smith Level: advanced 352d382aafbSBarry Smith 353d382aafbSBarry Smith .seealso: PetscUnlikely() 354d382aafbSBarry Smith M*/ 355d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 356d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 357d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 358d382aafbSBarry Smith #else 359cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 360cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 361d382aafbSBarry Smith #endif 362d382aafbSBarry Smith 363cf9c20a2SJed Brown /*MC 364cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 365cf9c20a2SJed Brown 366cf9c20a2SJed Brown Synopsis: 367cf9c20a2SJed Brown #include <petscsys.h> 368cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 369cf9c20a2SJed Brown 370cf9c20a2SJed Brown Not Collective 371cf9c20a2SJed Brown 372cf9c20a2SJed Brown Input Parameters: 373cf9c20a2SJed Brown . cond - condition or expression 374cf9c20a2SJed Brown 375cf9c20a2SJed Brown Notes: 376cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 377cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 378cf9c20a2SJed Brown 379cf9c20a2SJed Brown Level: advanced 380cf9c20a2SJed Brown 381cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 382cf9c20a2SJed Brown M*/ 383cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 384cf9c20a2SJed Brown 385c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 386c8b9133aSSatish Balay 387c8b9133aSSatish Balay #if defined(__INTEL_COMPILER) && !defined(_WIN32) 388c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 3891dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 390c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 391160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 392c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 393160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 394160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 395c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 396c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 397c8b9133aSSatish Balay #else 398c8b9133aSSatish Balay # define PetscPragmaSIMD 399c8b9133aSSatish Balay #endif 400c8b9133aSSatish Balay 401d382aafbSBarry Smith /* 402d382aafbSBarry Smith Declare extern C stuff after including external header files 403d382aafbSBarry Smith */ 404d382aafbSBarry Smith 4056a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 40670b3c8c7SBarry Smith 4078b49ba18SBarry Smith /* 408390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4098b49ba18SBarry Smith */ 4108b49ba18SBarry Smith #include <petscmath.h> 4118b49ba18SBarry Smith 4126a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 413d382aafbSBarry Smith 414d382aafbSBarry Smith /*MC 4150298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 416d382aafbSBarry Smith 417d382aafbSBarry Smith Level: beginner 418d382aafbSBarry Smith 419e28ce29aSPatrick Sanan Note: 420e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 421d382aafbSBarry Smith some default 422d382aafbSBarry Smith 423e28ce29aSPatrick Sanan Fortran Notes: 424e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 425d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 426d382aafbSBarry Smith 427e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 428d382aafbSBarry Smith 429d382aafbSBarry Smith M*/ 4300298fd71SBarry Smith #define PETSC_IGNORE NULL 431d382aafbSBarry Smith 432c528d872SBarry Smith /* This is deprecated */ 433c528d872SBarry Smith #define PETSC_NULL NULL 434c528d872SBarry Smith 435d382aafbSBarry Smith /*MC 436557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 437557d4da8SBarry Smith where you wish PETSc to use the default. 438557d4da8SBarry Smith 439557d4da8SBarry Smith Level: beginner 440557d4da8SBarry Smith 441e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 442557d4da8SBarry Smith 443557d4da8SBarry Smith M*/ 444557d4da8SBarry Smith #define PETSC_DECIDE -1 445557d4da8SBarry Smith 446557d4da8SBarry Smith /*MC 447d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 448d382aafbSBarry Smith where you wish PETSc to compute the required value. 449d382aafbSBarry Smith 450d382aafbSBarry Smith Level: beginner 451d382aafbSBarry Smith 452e28ce29aSPatrick Sanan Developer Note: 453e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 454557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 455557d4da8SBarry Smith 4560298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 459d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 460d382aafbSBarry Smith 461d382aafbSBarry Smith /*MC 462557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 463557d4da8SBarry Smith where you wish PETSc to use the default. 464557d4da8SBarry Smith 465557d4da8SBarry Smith Level: beginner 466557d4da8SBarry Smith 467e28ce29aSPatrick Sanan Fortran Notes: 468e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 469557d4da8SBarry Smith 4700298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 471557d4da8SBarry Smith 472557d4da8SBarry Smith M*/ 473557d4da8SBarry Smith #define PETSC_DEFAULT -2 474557d4da8SBarry Smith 475557d4da8SBarry Smith /*MC 476d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 477ea8fe74dSBarry Smith all the processes that PETSc knows about. 478d382aafbSBarry Smith 479d382aafbSBarry Smith Level: beginner 480d382aafbSBarry Smith 481e28ce29aSPatrick Sanan Notes: 482e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 483d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 484d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 485a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 486a990b902SBarry Smith 487a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 488a990b902SBarry Smith is called because it may not have a valid value yet. 489d382aafbSBarry Smith 490d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 491d382aafbSBarry Smith 492d382aafbSBarry Smith M*/ 493014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 494d382aafbSBarry Smith 495d382aafbSBarry Smith /*MC 496503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 497d382aafbSBarry Smith 498d382aafbSBarry Smith Level: beginner 499d382aafbSBarry Smith 500e28ce29aSPatrick Sanan Notes: 501e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 502a990b902SBarry Smith 503d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 504d382aafbSBarry Smith 505d382aafbSBarry Smith M*/ 506d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 507d382aafbSBarry Smith 5086de5d289SStefano Zampini /*MC 5096de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5106de5d289SStefano Zampini MPI with MPI_Init_thread. 5116de5d289SStefano Zampini 5126de5d289SStefano Zampini Level: beginner 5136de5d289SStefano Zampini 5146de5d289SStefano Zampini Notes: 5156de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5166de5d289SStefano Zampini 5176de5d289SStefano Zampini .seealso: PetscInitialize() 5186de5d289SStefano Zampini 5196de5d289SStefano Zampini M*/ 5206de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5216de5d289SStefano Zampini 522d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5238ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 524014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 525014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5264cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 527d382aafbSBarry Smith 528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 531d382aafbSBarry Smith 5327381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 53305035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 534cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5353c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5367381773fSBarry Smith #endif 5377381773fSBarry Smith 53805035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 53905035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 54005035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5413c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 54205035670SJunchao Zhang #endif 54305035670SJunchao Zhang 544540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 545540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 546540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 547540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 548540e20f2SPierre Jolivet #endif 549540e20f2SPierre Jolivet 550d382aafbSBarry Smith /*MC 55195dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 552d382aafbSBarry Smith 553eca87e8dSBarry Smith Synopsis: 554aaa7dc30SBarry Smith #include <petscsys.h> 555eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 556eca87e8dSBarry Smith 557eca87e8dSBarry Smith Not Collective 558eca87e8dSBarry Smith 559d382aafbSBarry Smith Input Parameter: 560d382aafbSBarry Smith . m - number of bytes to allocate 561d382aafbSBarry Smith 562d382aafbSBarry Smith Output Parameter: 563d382aafbSBarry Smith . result - memory allocated 564d382aafbSBarry Smith 565d382aafbSBarry Smith Level: beginner 566d382aafbSBarry Smith 56749d7da52SJed Brown Notes: 56849d7da52SJed Brown Memory is always allocated at least double aligned 569d382aafbSBarry Smith 57049d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 571d382aafbSBarry Smith 572d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 573d382aafbSBarry Smith 574d382aafbSBarry Smith M*/ 575071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 576d382aafbSBarry Smith 577d382aafbSBarry Smith /*MC 5783221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5793221ece2SMatthew G. Knepley 5803221ece2SMatthew G. Knepley Synopsis: 5813221ece2SMatthew G. Knepley #include <petscsys.h> 5823221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5833221ece2SMatthew G. Knepley 5843221ece2SMatthew G. Knepley Not Collective 5853221ece2SMatthew G. Knepley 5863221ece2SMatthew G. Knepley Input Parameters: 5873221ece2SMatthew G. Knepley + m - number of bytes to allocate 58892f119d6SBarry Smith - result - previous memory 5893221ece2SMatthew G. Knepley 5903221ece2SMatthew G. Knepley Output Parameter: 5913221ece2SMatthew G. Knepley . result - new memory allocated 5923221ece2SMatthew G. Knepley 5933221ece2SMatthew G. Knepley Level: developer 5943221ece2SMatthew G. Knepley 5953221ece2SMatthew G. Knepley Notes: 5963221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 5973221ece2SMatthew G. Knepley 5983221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 5993221ece2SMatthew G. Knepley 6003221ece2SMatthew G. Knepley M*/ 6013221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6023221ece2SMatthew G. Knepley 6033221ece2SMatthew G. Knepley /*MC 604503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 605d382aafbSBarry Smith 606d382aafbSBarry Smith Synopsis: 607aaa7dc30SBarry Smith #include <petscsys.h> 608d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 609d382aafbSBarry Smith 610eca87e8dSBarry Smith Not Collective 611eca87e8dSBarry Smith 612eca87e8dSBarry Smith Input Parameters: 613eca87e8dSBarry Smith . addr - address to align (any pointer type) 614eca87e8dSBarry Smith 615d382aafbSBarry Smith Level: developer 616d382aafbSBarry Smith 617d382aafbSBarry Smith .seealso: PetscMallocAlign() 618d382aafbSBarry Smith 619d382aafbSBarry Smith M*/ 620d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 621d382aafbSBarry Smith 622d382aafbSBarry Smith /*MC 623785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 624d382aafbSBarry Smith 625eca87e8dSBarry Smith Synopsis: 626aaa7dc30SBarry Smith #include <petscsys.h> 627785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 628785e854fSJed Brown 629785e854fSJed Brown Not Collective 630785e854fSJed Brown 631785e854fSJed Brown Input Parameter: 632390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 633785e854fSJed Brown 634785e854fSJed Brown Output Parameter: 6351fe1b817SJunchao Zhang . r1 - memory allocated 636785e854fSJed Brown 637e28ce29aSPatrick Sanan Note: 638e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 639390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 640390e1bf2SBarry Smith $ PetscInt *id; 641390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 642390e1bf2SBarry Smith not 643390e1bf2SBarry Smith $ PetscInt *id; 644390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 645390e1bf2SBarry Smith 6461fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 647390e1bf2SBarry Smith 648390e1bf2SBarry Smith Level: beginner 649785e854fSJed Brown 6501795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 651785e854fSJed Brown 652785e854fSJed Brown M*/ 6532553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 654785e854fSJed Brown 655785e854fSJed Brown /*MC 6561795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6571795a4d1SJed Brown 6581795a4d1SJed Brown Synopsis: 659aaa7dc30SBarry Smith #include <petscsys.h> 6601795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6611795a4d1SJed Brown 6621795a4d1SJed Brown Not Collective 6631795a4d1SJed Brown 6641795a4d1SJed Brown Input Parameter: 6651795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6661795a4d1SJed Brown 6671795a4d1SJed Brown Output Parameter: 6681fe1b817SJunchao Zhang . r1 - memory allocated 6691795a4d1SJed Brown 670e28ce29aSPatrick Sanan Notes: 671e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 672390e1bf2SBarry Smith 673390e1bf2SBarry Smith Level: beginner 6741795a4d1SJed Brown 6751795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6761795a4d1SJed Brown 6771795a4d1SJed Brown M*/ 6782553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 6791795a4d1SJed Brown 6801795a4d1SJed Brown /*MC 681dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 682d382aafbSBarry Smith 683eca87e8dSBarry Smith Synopsis: 684aaa7dc30SBarry Smith #include <petscsys.h> 685dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 686eca87e8dSBarry Smith 687eca87e8dSBarry Smith Not Collective 688eca87e8dSBarry Smith 689d382aafbSBarry Smith Input Parameter: 690d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 691dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 692d382aafbSBarry Smith 693d382aafbSBarry Smith Output Parameter: 694d382aafbSBarry Smith + r1 - memory allocated in first chunk 695d382aafbSBarry Smith - r2 - memory allocated in second chunk 696d382aafbSBarry Smith 697d382aafbSBarry Smith Level: developer 698d382aafbSBarry Smith 6991795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 700d382aafbSBarry Smith 701d382aafbSBarry Smith M*/ 7022553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 703d382aafbSBarry Smith 704d382aafbSBarry Smith /*MC 7051795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 706d382aafbSBarry Smith 707eca87e8dSBarry Smith Synopsis: 708aaa7dc30SBarry Smith #include <petscsys.h> 7091795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 710eca87e8dSBarry Smith 711eca87e8dSBarry Smith Not Collective 712eca87e8dSBarry Smith 713d382aafbSBarry Smith Input Parameter: 714d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7151795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7161795a4d1SJed Brown 7171795a4d1SJed Brown Output Parameter: 7181795a4d1SJed Brown + r1 - memory allocated in first chunk 7191795a4d1SJed Brown - r2 - memory allocated in second chunk 7201795a4d1SJed Brown 7211795a4d1SJed Brown Level: developer 7221795a4d1SJed Brown 7231795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7241795a4d1SJed Brown 7251795a4d1SJed Brown M*/ 7262553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7271795a4d1SJed Brown 7281795a4d1SJed Brown /*MC 729dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 730d382aafbSBarry Smith 731d382aafbSBarry Smith Synopsis: 732aaa7dc30SBarry Smith #include <petscsys.h> 733dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 734d382aafbSBarry Smith 735d382aafbSBarry Smith Not Collective 736d382aafbSBarry Smith 737d382aafbSBarry Smith Input Parameter: 738d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 739d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 740dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 741d382aafbSBarry Smith 742d382aafbSBarry Smith Output Parameter: 743d382aafbSBarry Smith + r1 - memory allocated in first chunk 744d382aafbSBarry Smith . r2 - memory allocated in second chunk 745d382aafbSBarry Smith - r3 - memory allocated in third chunk 746d382aafbSBarry Smith 747d382aafbSBarry Smith Level: developer 748d382aafbSBarry Smith 7491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 750d382aafbSBarry Smith 751d382aafbSBarry Smith M*/ 7522553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 753d382aafbSBarry Smith 754d382aafbSBarry Smith /*MC 7551795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 756d382aafbSBarry Smith 757eca87e8dSBarry Smith Synopsis: 758aaa7dc30SBarry Smith #include <petscsys.h> 7591795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 760eca87e8dSBarry Smith 761eca87e8dSBarry Smith Not Collective 762eca87e8dSBarry Smith 763d382aafbSBarry Smith Input Parameter: 764d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 765d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7661795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7671795a4d1SJed Brown 7681795a4d1SJed Brown Output Parameter: 7691795a4d1SJed Brown + r1 - memory allocated in first chunk 7701795a4d1SJed Brown . r2 - memory allocated in second chunk 7711795a4d1SJed Brown - r3 - memory allocated in third chunk 7721795a4d1SJed Brown 7731795a4d1SJed Brown Level: developer 7741795a4d1SJed Brown 7751795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7761795a4d1SJed Brown 7771795a4d1SJed Brown M*/ 7782553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 7791795a4d1SJed Brown 7801795a4d1SJed Brown /*MC 781dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 782d382aafbSBarry Smith 783d382aafbSBarry Smith Synopsis: 784aaa7dc30SBarry Smith #include <petscsys.h> 785dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 786d382aafbSBarry Smith 787d382aafbSBarry Smith Not Collective 788d382aafbSBarry Smith 789d382aafbSBarry Smith Input Parameter: 790d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 791d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 792d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 793dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 794d382aafbSBarry Smith 795d382aafbSBarry Smith Output Parameter: 796d382aafbSBarry Smith + r1 - memory allocated in first chunk 797d382aafbSBarry Smith . r2 - memory allocated in second chunk 798d382aafbSBarry Smith . r3 - memory allocated in third chunk 799d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 800d382aafbSBarry Smith 801d382aafbSBarry Smith Level: developer 802d382aafbSBarry Smith 8031795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 804d382aafbSBarry Smith 805d382aafbSBarry Smith M*/ 8062553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 807d382aafbSBarry Smith 808d382aafbSBarry Smith /*MC 8091795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 810d382aafbSBarry Smith 811eca87e8dSBarry Smith Synopsis: 812aaa7dc30SBarry Smith #include <petscsys.h> 8131795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 814eca87e8dSBarry Smith 815eca87e8dSBarry Smith Not Collective 816eca87e8dSBarry Smith 817e28ce29aSPatrick Sanan Input Parameters: 818d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 819d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 820d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8211795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8221795a4d1SJed Brown 823e28ce29aSPatrick Sanan Output Parameters: 8241795a4d1SJed Brown + r1 - memory allocated in first chunk 8251795a4d1SJed Brown . r2 - memory allocated in second chunk 8261795a4d1SJed Brown . r3 - memory allocated in third chunk 8271795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8281795a4d1SJed Brown 8291795a4d1SJed Brown Level: developer 8301795a4d1SJed Brown 8311795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8321795a4d1SJed Brown 8331795a4d1SJed Brown M*/ 8342553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8351795a4d1SJed Brown 8361795a4d1SJed Brown /*MC 837dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 838d382aafbSBarry Smith 839d382aafbSBarry Smith Synopsis: 840aaa7dc30SBarry Smith #include <petscsys.h> 841dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 842d382aafbSBarry Smith 843d382aafbSBarry Smith Not Collective 844d382aafbSBarry Smith 845e28ce29aSPatrick Sanan Input Parameters: 846d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 847d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 848d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 849d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 850dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 851d382aafbSBarry Smith 852e28ce29aSPatrick Sanan Output Parameters: 853d382aafbSBarry Smith + r1 - memory allocated in first chunk 854d382aafbSBarry Smith . r2 - memory allocated in second chunk 855d382aafbSBarry Smith . r3 - memory allocated in third chunk 856d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 857d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 858d382aafbSBarry Smith 859d382aafbSBarry Smith Level: developer 860d382aafbSBarry Smith 8611795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 862d382aafbSBarry Smith 863d382aafbSBarry Smith M*/ 8642553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 865d382aafbSBarry Smith 866d382aafbSBarry Smith /*MC 8671795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 868d382aafbSBarry Smith 869eca87e8dSBarry Smith Synopsis: 870aaa7dc30SBarry Smith #include <petscsys.h> 8711795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 872eca87e8dSBarry Smith 873eca87e8dSBarry Smith Not Collective 874eca87e8dSBarry Smith 875e28ce29aSPatrick Sanan Input Parameters: 876d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 877d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 878d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 879d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 8801795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 8811795a4d1SJed Brown 882e28ce29aSPatrick Sanan Output Parameters: 8831795a4d1SJed Brown + r1 - memory allocated in first chunk 8841795a4d1SJed Brown . r2 - memory allocated in second chunk 8851795a4d1SJed Brown . r3 - memory allocated in third chunk 8861795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8871795a4d1SJed Brown - r5 - memory allocated in fifth chunk 8881795a4d1SJed Brown 8891795a4d1SJed Brown Level: developer 8901795a4d1SJed Brown 8911795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 8921795a4d1SJed Brown 8931795a4d1SJed Brown M*/ 8942553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 895d382aafbSBarry Smith 896d382aafbSBarry Smith /*MC 897dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 898d382aafbSBarry Smith 899d382aafbSBarry Smith Synopsis: 900aaa7dc30SBarry Smith #include <petscsys.h> 901dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 902d382aafbSBarry Smith 903d382aafbSBarry Smith Not Collective 904d382aafbSBarry Smith 905e28ce29aSPatrick Sanan Input Parameters: 906d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 907d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 908d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 909d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 910d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 911dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 912d382aafbSBarry Smith 913e28ce29aSPatrick Sanan Output Parameteasr: 914d382aafbSBarry Smith + r1 - memory allocated in first chunk 915d382aafbSBarry Smith . r2 - memory allocated in second chunk 916d382aafbSBarry Smith . r3 - memory allocated in third chunk 917d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 918d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 919d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 920d382aafbSBarry Smith 921d382aafbSBarry Smith Level: developer 922d382aafbSBarry Smith 9231795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 924d382aafbSBarry Smith 925d382aafbSBarry Smith M*/ 9262553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 927d382aafbSBarry Smith 928d382aafbSBarry Smith /*MC 9291795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 930d382aafbSBarry Smith 931eca87e8dSBarry Smith Synopsis: 932aaa7dc30SBarry Smith #include <petscsys.h> 9331795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 934eca87e8dSBarry Smith 935eca87e8dSBarry Smith Not Collective 936eca87e8dSBarry Smith 937e28ce29aSPatrick Sanan Input Parameters: 938d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 939d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 940d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 941d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 942d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9431795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9441795a4d1SJed Brown 945e28ce29aSPatrick Sanan Output Parameters: 9461795a4d1SJed Brown + r1 - memory allocated in first chunk 9471795a4d1SJed Brown . r2 - memory allocated in second chunk 9481795a4d1SJed Brown . r3 - memory allocated in third chunk 9491795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9501795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9511795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9521795a4d1SJed Brown 9531795a4d1SJed Brown Level: developer 9541795a4d1SJed Brown 9551795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9561795a4d1SJed Brown 9571795a4d1SJed Brown M*/ 9582553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9591795a4d1SJed Brown 9601795a4d1SJed Brown /*MC 961dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 962d382aafbSBarry Smith 963d382aafbSBarry Smith Synopsis: 964aaa7dc30SBarry Smith #include <petscsys.h> 965dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 966d382aafbSBarry Smith 967d382aafbSBarry Smith Not Collective 968d382aafbSBarry Smith 969e28ce29aSPatrick Sanan Input Parameters: 970d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 971d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 972d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 973d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 974d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 975d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 976dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 977d382aafbSBarry Smith 978e28ce29aSPatrick Sanan Output Parameters: 979d382aafbSBarry Smith + r1 - memory allocated in first chunk 980d382aafbSBarry Smith . r2 - memory allocated in second chunk 981d382aafbSBarry Smith . r3 - memory allocated in third chunk 982d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 983d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 984d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 985eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 986d382aafbSBarry Smith 987d382aafbSBarry Smith Level: developer 988d382aafbSBarry Smith 9891795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 990d382aafbSBarry Smith 991d382aafbSBarry Smith M*/ 9922553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 993d382aafbSBarry Smith 994d382aafbSBarry Smith /*MC 9951795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 9961795a4d1SJed Brown 9971795a4d1SJed Brown Synopsis: 998aaa7dc30SBarry Smith #include <petscsys.h> 9991795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10001795a4d1SJed Brown 10011795a4d1SJed Brown Not Collective 10021795a4d1SJed Brown 1003e28ce29aSPatrick Sanan Input Parameters: 10041795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10051795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10061795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10071795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10081795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10091795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10101795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10111795a4d1SJed Brown 1012e28ce29aSPatrick Sanan Output Parameters: 10131795a4d1SJed Brown + r1 - memory allocated in first chunk 10141795a4d1SJed Brown . r2 - memory allocated in second chunk 10151795a4d1SJed Brown . r3 - memory allocated in third chunk 10161795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10171795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10181795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10191795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10201795a4d1SJed Brown 10211795a4d1SJed Brown Level: developer 10221795a4d1SJed Brown 10231795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10241795a4d1SJed Brown 10251795a4d1SJed Brown M*/ 10262553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10271795a4d1SJed Brown 10281795a4d1SJed Brown /*MC 1029503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1030d382aafbSBarry Smith 1031eca87e8dSBarry Smith Synopsis: 1032aaa7dc30SBarry Smith #include <petscsys.h> 1033b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1034eca87e8dSBarry Smith 1035eca87e8dSBarry Smith Not Collective 1036eca87e8dSBarry Smith 1037d382aafbSBarry Smith Output Parameter: 1038b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1039d382aafbSBarry Smith 1040d382aafbSBarry Smith Level: beginner 1041d382aafbSBarry Smith 1042390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1043d382aafbSBarry Smith 1044d382aafbSBarry Smith M*/ 1045b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1046ad0619ddSBarry Smith 1047ad0619ddSBarry Smith /*MC 1048b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1049ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1050ad0619ddSBarry Smith 1051ad0619ddSBarry Smith Synopsis: 1052aaa7dc30SBarry Smith #include <petscsys.h> 1053b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1054ad0619ddSBarry Smith 1055ad0619ddSBarry Smith Not Collective 1056ad0619ddSBarry Smith 1057ad0619ddSBarry Smith Input Parameter: 1058b00a9115SJed Brown . obj - object memory is logged to 1059ad0619ddSBarry Smith 1060ad0619ddSBarry Smith Output Parameter: 1061b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1062ad0619ddSBarry Smith 1063ad0619ddSBarry Smith Level: developer 1064ad0619ddSBarry Smith 1065390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1066ad0619ddSBarry Smith 1067ad0619ddSBarry Smith M*/ 1068d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1069d382aafbSBarry Smith 1070d382aafbSBarry Smith /*MC 1071d382aafbSBarry Smith PetscFree - Frees memory 1072d382aafbSBarry Smith 1073eca87e8dSBarry Smith Synopsis: 1074aaa7dc30SBarry Smith #include <petscsys.h> 1075eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1076eca87e8dSBarry Smith 1077eca87e8dSBarry Smith Not Collective 1078eca87e8dSBarry Smith 1079d382aafbSBarry Smith Input Parameter: 10807f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1081d382aafbSBarry Smith 1082d382aafbSBarry Smith Level: beginner 1083d382aafbSBarry Smith 108449d7da52SJed Brown Notes: 1085390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1086390e1bf2SBarry Smith 108749d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1088d382aafbSBarry Smith 1089390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1090d382aafbSBarry Smith 1091d382aafbSBarry Smith M*/ 1092ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1093d382aafbSBarry Smith 1094d382aafbSBarry Smith /*MC 1095d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1096d382aafbSBarry Smith 1097eca87e8dSBarry Smith Synopsis: 1098aaa7dc30SBarry Smith #include <petscsys.h> 1099eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1100eca87e8dSBarry Smith 1101eca87e8dSBarry Smith Not Collective 1102eca87e8dSBarry Smith 1103e28ce29aSPatrick Sanan Input Parameters: 1104d382aafbSBarry Smith + memory1 - memory to free 1105d382aafbSBarry Smith - memory2 - 2nd memory to free 1106d382aafbSBarry Smith 1107d382aafbSBarry Smith Level: developer 1108d382aafbSBarry Smith 110995452b02SPatrick Sanan Notes: 111095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1111d382aafbSBarry Smith 1112d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1113d382aafbSBarry Smith 1114d382aafbSBarry Smith M*/ 1115ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1116d382aafbSBarry Smith 1117d382aafbSBarry Smith /*MC 1118d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1119d382aafbSBarry Smith 1120eca87e8dSBarry Smith Synopsis: 1121aaa7dc30SBarry Smith #include <petscsys.h> 1122eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1123eca87e8dSBarry Smith 1124eca87e8dSBarry Smith Not Collective 1125eca87e8dSBarry Smith 1126e28ce29aSPatrick Sanan Input Parameters: 1127d382aafbSBarry Smith + memory1 - memory to free 1128d382aafbSBarry Smith . memory2 - 2nd memory to free 1129d382aafbSBarry Smith - memory3 - 3rd memory to free 1130d382aafbSBarry Smith 1131d382aafbSBarry Smith Level: developer 1132d382aafbSBarry Smith 113395452b02SPatrick Sanan Notes: 113495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1135d382aafbSBarry Smith 1136d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1137d382aafbSBarry Smith 1138d382aafbSBarry Smith M*/ 1139ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1140d382aafbSBarry Smith 1141d382aafbSBarry Smith /*MC 1142d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1143d382aafbSBarry Smith 1144eca87e8dSBarry Smith Synopsis: 1145aaa7dc30SBarry Smith #include <petscsys.h> 1146eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1147eca87e8dSBarry Smith 1148eca87e8dSBarry Smith Not Collective 1149eca87e8dSBarry Smith 1150e28ce29aSPatrick Sanan Input Parameters: 1151d382aafbSBarry Smith + m1 - memory to free 1152d382aafbSBarry Smith . m2 - 2nd memory to free 1153d382aafbSBarry Smith . m3 - 3rd memory to free 1154d382aafbSBarry Smith - m4 - 4th memory to free 1155d382aafbSBarry Smith 1156d382aafbSBarry Smith Level: developer 1157d382aafbSBarry Smith 115895452b02SPatrick Sanan Notes: 115995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1160d382aafbSBarry Smith 1161d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1162d382aafbSBarry Smith 1163d382aafbSBarry Smith M*/ 1164ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1165d382aafbSBarry Smith 1166d382aafbSBarry Smith /*MC 1167d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1168d382aafbSBarry Smith 1169eca87e8dSBarry Smith Synopsis: 1170aaa7dc30SBarry Smith #include <petscsys.h> 1171eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1172eca87e8dSBarry Smith 1173eca87e8dSBarry Smith Not Collective 1174eca87e8dSBarry Smith 1175e28ce29aSPatrick Sanan Input Parameters: 1176d382aafbSBarry Smith + m1 - memory to free 1177d382aafbSBarry Smith . m2 - 2nd memory to free 1178d382aafbSBarry Smith . m3 - 3rd memory to free 1179d382aafbSBarry Smith . m4 - 4th memory to free 1180d382aafbSBarry Smith - m5 - 5th memory to free 1181d382aafbSBarry Smith 1182d382aafbSBarry Smith Level: developer 1183d382aafbSBarry Smith 118495452b02SPatrick Sanan Notes: 118595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1186d382aafbSBarry Smith 1187d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1188d382aafbSBarry Smith 1189d382aafbSBarry Smith M*/ 1190ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1191d382aafbSBarry Smith 1192d382aafbSBarry Smith /*MC 1193d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1194d382aafbSBarry Smith 1195eca87e8dSBarry Smith Synopsis: 1196aaa7dc30SBarry Smith #include <petscsys.h> 1197eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1198eca87e8dSBarry Smith 1199eca87e8dSBarry Smith Not Collective 1200eca87e8dSBarry Smith 1201e28ce29aSPatrick Sanan Input Parameters: 1202d382aafbSBarry Smith + m1 - memory to free 1203d382aafbSBarry Smith . m2 - 2nd memory to free 1204d382aafbSBarry Smith . m3 - 3rd memory to free 1205d382aafbSBarry Smith . m4 - 4th memory to free 1206d382aafbSBarry Smith . m5 - 5th memory to free 1207d382aafbSBarry Smith - m6 - 6th memory to free 1208d382aafbSBarry Smith 1209d382aafbSBarry Smith 1210d382aafbSBarry Smith Level: developer 1211d382aafbSBarry Smith 121295452b02SPatrick Sanan Notes: 121395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1214d382aafbSBarry Smith 1215d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1216d382aafbSBarry Smith 1217d382aafbSBarry Smith M*/ 1218ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1219d382aafbSBarry Smith 1220d382aafbSBarry Smith /*MC 1221d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1222d382aafbSBarry Smith 1223eca87e8dSBarry Smith Synopsis: 1224aaa7dc30SBarry Smith #include <petscsys.h> 1225eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1226eca87e8dSBarry Smith 1227eca87e8dSBarry Smith Not Collective 1228eca87e8dSBarry Smith 1229e28ce29aSPatrick Sanan Input Parameters: 1230d382aafbSBarry Smith + m1 - memory to free 1231d382aafbSBarry Smith . m2 - 2nd memory to free 1232d382aafbSBarry Smith . m3 - 3rd memory to free 1233d382aafbSBarry Smith . m4 - 4th memory to free 1234d382aafbSBarry Smith . m5 - 5th memory to free 1235d382aafbSBarry Smith . m6 - 6th memory to free 1236d382aafbSBarry Smith - m7 - 7th memory to free 1237d382aafbSBarry Smith 1238d382aafbSBarry Smith 1239d382aafbSBarry Smith Level: developer 1240d382aafbSBarry Smith 124195452b02SPatrick Sanan Notes: 124295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1243d382aafbSBarry Smith 1244d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1245d382aafbSBarry Smith PetscMalloc7() 1246d382aafbSBarry Smith 1247d382aafbSBarry Smith M*/ 1248ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1249d382aafbSBarry Smith 1250ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1251ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1252071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1253efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12543221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1255ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 125692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1258d382aafbSBarry Smith 1259d382aafbSBarry Smith /* 1260c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1261c1706be6SHong Zhang */ 1262c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1263c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 126431f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 126531f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 126631f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 126731f06eaaSHong Zhang #endif 1268c1706be6SHong Zhang 1269a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 127036763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1271a5057860SBarry Smith 1272a5057860SBarry Smith /* 127366d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1274d382aafbSBarry Smith */ 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 127692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1279e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1280e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 128192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 128292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1283efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 128492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 128592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1286608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1287608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1288d382aafbSBarry Smith 12896a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 12938e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1294d382aafbSBarry Smith 1295d382aafbSBarry Smith /* 1296d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1297d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1298d382aafbSBarry Smith functionality and/or error checking. 1299d382aafbSBarry Smith */ 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1302d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1310a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13142f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13192c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 132247340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13236fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13246991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13256991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1327d382aafbSBarry Smith 1328573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1329573b0fb4SBarry Smith 1330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1332014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1333d382aafbSBarry Smith 1334e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1335a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1336a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1337a53986e1SJed Brown 1338d382aafbSBarry Smith /* 1339d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1340d382aafbSBarry Smith */ 1341367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1342570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1343014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 13442414b3c7SJed Brown #else 13452414b3c7SJed Brown #define MPIU_SUM MPI_SUM 13462414b3c7SJed Brown #endif 1347570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1348014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1349014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1350d9822059SBarry Smith #else 1351d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1352d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1353d9822059SBarry Smith #endif 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1355d382aafbSBarry Smith 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1358eb3f98d2SBarry Smith 135995c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1360d6a4318aSJed Brown 1361639ff905SBarry Smith /* 1362639ff905SBarry Smith Defines PETSc error handling. 1363639ff905SBarry Smith */ 1364639ff905SBarry Smith #include <petscerror.h> 1365d382aafbSBarry Smith 13660700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1367014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1368014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 137081256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 137181256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 137281256985SMatthew G. Knepley 1373d382aafbSBarry Smith 1374d382aafbSBarry Smith /* 1375d382aafbSBarry Smith Routines that get memory usage information from the OS 1376d382aafbSBarry Smith */ 1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1380b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1381d382aafbSBarry Smith 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1383d382aafbSBarry Smith 1384d382aafbSBarry Smith /* 1385d382aafbSBarry Smith Initialization of PETSc 1386d382aafbSBarry Smith */ 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1397d382aafbSBarry Smith 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1399607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1400d382aafbSBarry Smith 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1405d382aafbSBarry Smith 1406a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1407a50e088cSMatthew G. Knepley 1408a50e088cSMatthew G. Knepley 1409d382aafbSBarry Smith /* 1410d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14112981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1412d382aafbSBarry Smith */ 1413638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1414638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1415638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1416d382aafbSBarry Smith 1417d382aafbSBarry Smith /* 1418d382aafbSBarry Smith Functions that can act on any PETSc object. 1419d382aafbSBarry Smith */ 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1438bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1439bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14420eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14430eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1445d382aafbSBarry Smith 1446665c2dedSJed Brown #include <petscviewertypes.h> 1447639ff905SBarry Smith #include <petscoptions.h> 1448639ff905SBarry Smith 1449608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1450608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1451608c71bfSMatthew G. Knepley 14520633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14530633abcbSJed Brown 1454c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1455dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1456639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14570005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14580005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1466685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 14694099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1471b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1474d382aafbSBarry Smith 1475e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 14767aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1477e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1478e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1479e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1480e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1481e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1482e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1483e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1484e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1485e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 148615681b3cSBarry Smith 1487ec7429eaSBarry Smith #else 14887aab2a10SBarry Smith #define PetscSAWsBlock() 0 1489e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1490e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1491e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1492e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1493e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1494e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1495e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1496e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1497e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 149815681b3cSBarry Smith 1499ec7429eaSBarry Smith #endif 1500b90c6cbeSBarry Smith 150182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 150282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 150382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 15047d5d4d99SBarry Smith 15055fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1506a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15075fe58b6fSBarry Smith #endif 15087eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1509a64a8e02SBarry Smith 1510140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1511140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1512140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1513140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1514140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1515140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1516d382aafbSBarry Smith 1517d382aafbSBarry Smith /* 1518503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1519d382aafbSBarry Smith link libraries that will be loaded as needed. 1520d382aafbSBarry Smith */ 1521a240a19fSJed Brown 1522a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1523a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1524140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15251c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15261c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 152744ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1528140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1529140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1530140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1531d382aafbSBarry Smith 1532014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1540d382aafbSBarry Smith 1541d382aafbSBarry Smith /* 1542d382aafbSBarry Smith Useful utility routines 1543d382aafbSBarry Smith */ 1544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1546d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1547014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 15516ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 15526ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1553d382aafbSBarry Smith 155464ac3b0dSPatrick Sanan /*MC 1555ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1556503cfb0cSBarry Smith 1557e28ce29aSPatrick Sanan Notes: 1558e28ce29aSPatrick Sanan This is useful in cases like 1559503cfb0cSBarry Smith $ int *a; 1560ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 15611cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 156264ac3b0dSPatrick Sanan 156364ac3b0dSPatrick Sanan Level: beginner 156464ac3b0dSPatrick Sanan 156564ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 156664ac3b0dSPatrick Sanan M*/ 1567d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1568503cfb0cSBarry Smith 1569d382aafbSBarry Smith /*MC 1570d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1571d382aafbSBarry Smith 1572d382aafbSBarry Smith Synopsis: 1573aaa7dc30SBarry Smith #include <petscsys.h> 1574*659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1575d382aafbSBarry Smith 1576*659f7ba0SBarry Smith Collective on comm 1577eca87e8dSBarry Smith 1578d382aafbSBarry Smith Input Parameters: 1579*659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1580d382aafbSBarry Smith . format - the usual printf() format string 1581*659f7ba0SBarry Smith - args - arguments to be printed 1582d382aafbSBarry Smith 1583d382aafbSBarry Smith Level: developer 1584d382aafbSBarry Smith 1585d382aafbSBarry Smith Fortran Note: 1586d382aafbSBarry Smith This routine is not supported in Fortran. 1587d382aafbSBarry Smith 1588*659f7ba0SBarry Smith Note: 1589*659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1590*659f7ba0SBarry Smith 1591*659f7ba0SBarry Smith To use, write your own function, for example, 1592*659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1593*659f7ba0SBarry Smith ${ 1594*659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1595*659f7ba0SBarry Smith $} 1596*659f7ba0SBarry Smith then do the assigment 1597*659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1598*659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1599*659f7ba0SBarry Smith 1600*659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1601d382aafbSBarry Smith 1602d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1603d382aafbSBarry Smith M*/ 1604014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1605d382aafbSBarry Smith 1606fcfd50ebSBarry Smith /* 1607fcfd50ebSBarry Smith Defines PETSc profiling. 1608fcfd50ebSBarry Smith */ 16092c8e378dSBarry Smith #include <petsclog.h> 1610fcfd50ebSBarry Smith 1611fcfd50ebSBarry Smith /* 1612fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1613fcfd50ebSBarry Smith */ 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16211b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1622fcfd50ebSBarry Smith 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1626d382aafbSBarry Smith 1627d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1628d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1629d781fa04SBarry Smith 1630d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1632016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 163374ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1634d382aafbSBarry Smith #endif 1635d382aafbSBarry Smith 1636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 16380ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1643d382aafbSBarry Smith 1644014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1650b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1651d382aafbSBarry Smith 1652d382aafbSBarry Smith /* 1653d382aafbSBarry Smith For use in debuggers 1654d382aafbSBarry Smith */ 1655014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1656014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1660d382aafbSBarry Smith 1661a663daf8SBarry Smith #include <stddef.h> 1662a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1663d382aafbSBarry Smith #include <stdlib.h> 16646c7e564aSBarry Smith 16654a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1666d382aafbSBarry Smith #include <xmmintrin.h> 1667d382aafbSBarry Smith #endif 1668d382aafbSBarry Smith 1669d382aafbSBarry Smith /*@C 1670580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1671580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1672580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1673580bdb30SBarry Smith 1674580bdb30SBarry Smith Not Collective 1675580bdb30SBarry Smith 1676580bdb30SBarry Smith Input Parameters: 1677580bdb30SBarry Smith + b - pointer to initial memory space 1678580bdb30SBarry Smith . a - pointer to copy space 1679580bdb30SBarry Smith - n - length (in bytes) of space to copy 1680580bdb30SBarry Smith 1681580bdb30SBarry Smith Level: intermediate 1682580bdb30SBarry Smith 1683580bdb30SBarry Smith Note: 1684857a15f1SBarry Smith PetscArraymove() is preferred 1685580bdb30SBarry Smith This routine is analogous to memmove(). 1686580bdb30SBarry Smith 1687580bdb30SBarry Smith Developers Note: This is inlined for performance 1688580bdb30SBarry Smith 1689580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1690580bdb30SBarry Smith PetscArraymove() 1691580bdb30SBarry Smith @*/ 1692580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1693580bdb30SBarry Smith { 1694580bdb30SBarry Smith PetscFunctionBegin; 1695580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1696580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1697580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1698580bdb30SBarry Smith if (a < b) { 1699580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1700580bdb30SBarry Smith else { 1701580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1702580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1703580bdb30SBarry Smith } 1704580bdb30SBarry Smith } else { 1705580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1706580bdb30SBarry Smith else { 1707580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1708580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1709580bdb30SBarry Smith } 1710580bdb30SBarry Smith } 1711580bdb30SBarry Smith #else 1712580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1713580bdb30SBarry Smith #endif 1714580bdb30SBarry Smith PetscFunctionReturn(0); 1715580bdb30SBarry Smith } 1716580bdb30SBarry Smith 1717d382aafbSBarry Smith /*@C 1718d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1719d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1720d382aafbSBarry Smith PetscMemmove() in that case. 1721d382aafbSBarry Smith 1722d382aafbSBarry Smith Not Collective 1723d382aafbSBarry Smith 1724d382aafbSBarry Smith Input Parameters: 1725d382aafbSBarry Smith + b - pointer to initial memory space 1726d382aafbSBarry Smith - n - length (in bytes) of space to copy 1727d382aafbSBarry Smith 1728d382aafbSBarry Smith Output Parameter: 1729d382aafbSBarry Smith . a - pointer to copy space 1730d382aafbSBarry Smith 1731d382aafbSBarry Smith Level: intermediate 1732d382aafbSBarry Smith 1733d382aafbSBarry Smith Compile Option: 1734d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1735d382aafbSBarry Smith for memory copies on double precision values. 1736d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1737d382aafbSBarry Smith for memory copies on double precision values. 1738d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1739d382aafbSBarry Smith for memory copies on double precision values. 1740d382aafbSBarry Smith 1741d382aafbSBarry Smith Note: 1742580bdb30SBarry Smith Prefer PetscArraycpy() 1743d382aafbSBarry Smith This routine is analogous to memcpy(). 17441fd49c25SBarry Smith Not available from Fortran 17451fd49c25SBarry Smith 1746f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1747f5f57ec0SBarry Smith 1748580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1749d382aafbSBarry Smith 1750d382aafbSBarry Smith @*/ 17517087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1752d382aafbSBarry Smith { 1753d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1754c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1755c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1756a7e36092SMatthew G Knepley PetscFunctionBegin; 1757e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1758e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1759a7e36092SMatthew G Knepley #else 1760d382aafbSBarry Smith PetscFunctionBegin; 1761a7e36092SMatthew G Knepley #endif 1762a47a537aSLisandro Dalcin if (a != b && n > 0) { 1763d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1764e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1765d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1766d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1767d382aafbSBarry Smith #endif 1768d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1769c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1770d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1771d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1772c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1773c5df96a5SBarry Smith PetscErrorCode ierr; 1774c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 17758b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1776d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1777d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1778d382aafbSBarry Smith #else 1779d382aafbSBarry Smith size_t i; 1780d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1781d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1782d382aafbSBarry Smith #endif 1783d382aafbSBarry Smith } else { 1784d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1785d382aafbSBarry Smith } 1786d382aafbSBarry Smith #else 1787d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1788d382aafbSBarry Smith #endif 1789d382aafbSBarry Smith } 1790d382aafbSBarry Smith PetscFunctionReturn(0); 1791d382aafbSBarry Smith } 1792d382aafbSBarry Smith 1793d382aafbSBarry Smith /*@C 1794d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1795d382aafbSBarry Smith 1796d382aafbSBarry Smith Not Collective 1797d382aafbSBarry Smith 1798d382aafbSBarry Smith Input Parameters: 1799d382aafbSBarry Smith + a - pointer to beginning memory location 1800d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1801d382aafbSBarry Smith 1802d382aafbSBarry Smith Level: intermediate 1803d382aafbSBarry Smith 1804d382aafbSBarry Smith Compile Option: 1805d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1806d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1807d382aafbSBarry Smith 18081fd49c25SBarry Smith Not available from Fortran 1809857a15f1SBarry Smith Prefer PetscArrayzero() 18101fd49c25SBarry Smith 1811503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1812503cfb0cSBarry Smith 1813580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1814d382aafbSBarry Smith @*/ 18157087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1816d382aafbSBarry Smith { 1817d382aafbSBarry Smith if (n > 0) { 1818d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 181918703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1820d382aafbSBarry Smith #endif 1821d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1822d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1823d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1824d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1825d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1826d382aafbSBarry Smith } else { 1827d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1828d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1829d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1830d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1831d382aafbSBarry Smith } else { 1832d382aafbSBarry Smith #endif 1833d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1834d382aafbSBarry Smith bzero((char *)a,n); 1835d382aafbSBarry Smith #else 1836d382aafbSBarry Smith memset((char*)a,0,n); 1837d382aafbSBarry Smith #endif 1838d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1839d382aafbSBarry Smith } 1840d382aafbSBarry Smith #endif 1841d382aafbSBarry Smith } 1842d382aafbSBarry Smith return 0; 1843d382aafbSBarry Smith } 1844d382aafbSBarry Smith 1845d382aafbSBarry Smith /*MC 1846580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1847580bdb30SBarry Smith 1848580bdb30SBarry Smith Synopsis: 1849580bdb30SBarry Smith #include <petscsys.h> 1850580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1851580bdb30SBarry Smith 1852580bdb30SBarry Smith Not Collective 1853580bdb30SBarry Smith 1854580bdb30SBarry Smith Input Parameters: 1855580bdb30SBarry Smith + str1 - First array 1856580bdb30SBarry Smith . str2 - Second array 1857580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1858580bdb30SBarry Smith 1859580bdb30SBarry Smith Output Parameters: 1860580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1861580bdb30SBarry Smith 1862580bdb30SBarry Smith Level: intermediate 1863580bdb30SBarry Smith 1864580bdb30SBarry Smith Note: 1865857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1866580bdb30SBarry Smith The arrays must be of the same type 1867580bdb30SBarry Smith 1868580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1869580bdb30SBarry Smith PetscArraymove() 1870580bdb30SBarry Smith M*/ 18719e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1872580bdb30SBarry Smith 18738f8f2f0dSBarry Smith /*MC 1874580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1875580bdb30SBarry Smith do not overlap 1876580bdb30SBarry Smith 1877580bdb30SBarry Smith Synopsis: 1878580bdb30SBarry Smith #include <petscsys.h> 1879580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1880580bdb30SBarry Smith 1881580bdb30SBarry Smith Not Collective 1882580bdb30SBarry Smith 1883580bdb30SBarry Smith Input Parameters: 1884580bdb30SBarry Smith + str1 - First array 1885580bdb30SBarry Smith . str2 - Second array 1886580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1887580bdb30SBarry Smith 1888580bdb30SBarry Smith Level: intermediate 1889580bdb30SBarry Smith 1890580bdb30SBarry Smith Note: 1891857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1892580bdb30SBarry Smith The arrays must be of the same type 1893580bdb30SBarry Smith 1894580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1895580bdb30SBarry Smith M*/ 18969e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1897580bdb30SBarry Smith 18988f8f2f0dSBarry Smith /*MC 1899580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1900580bdb30SBarry Smith 1901580bdb30SBarry Smith Synopsis: 1902580bdb30SBarry Smith #include <petscsys.h> 1903580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1904580bdb30SBarry Smith 1905580bdb30SBarry Smith Not Collective 1906580bdb30SBarry Smith 1907580bdb30SBarry Smith Input Parameters: 1908de25709eSStefano Zampini + str1 - First array (destination) 1909de25709eSStefano Zampini . str2 - Second array (source) 1910580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1911580bdb30SBarry Smith 1912580bdb30SBarry Smith Level: intermediate 1913580bdb30SBarry Smith 1914580bdb30SBarry Smith Note: 1915857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1916580bdb30SBarry Smith The arrays must be of the same type 1917580bdb30SBarry Smith 1918580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1919580bdb30SBarry Smith M*/ 19209e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1921580bdb30SBarry Smith 19228f8f2f0dSBarry Smith /*MC 1923580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1924580bdb30SBarry Smith 1925580bdb30SBarry Smith Synopsis: 1926580bdb30SBarry Smith #include <petscsys.h> 1927580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1928580bdb30SBarry Smith 1929580bdb30SBarry Smith Not Collective 1930580bdb30SBarry Smith 1931580bdb30SBarry Smith Input Parameters: 1932580bdb30SBarry Smith + str1 - array 1933580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1934580bdb30SBarry Smith 1935580bdb30SBarry Smith Level: intermediate 1936580bdb30SBarry Smith 1937580bdb30SBarry Smith Note: 1938857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1939580bdb30SBarry Smith 1940580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1941580bdb30SBarry Smith M*/ 19429e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1943580bdb30SBarry Smith 1944d382aafbSBarry Smith /*MC 1945d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1946d382aafbSBarry Smith 1947eca87e8dSBarry Smith Synopsis: 1948aaa7dc30SBarry Smith #include <petscsys.h> 1949eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1950eca87e8dSBarry Smith 1951d382aafbSBarry Smith Not Collective 1952d382aafbSBarry Smith 1953d382aafbSBarry Smith Input Parameters: 1954d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1955d382aafbSBarry Smith . n - number of elements to fetch 1956d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 195750d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1958d382aafbSBarry Smith 1959d382aafbSBarry Smith Level: developer 1960d382aafbSBarry Smith 1961d382aafbSBarry Smith Notes: 1962d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1963d382aafbSBarry Smith 196450d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 196550d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 196650d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 196763cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 196863cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 196963cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1970d382aafbSBarry Smith 1971d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1972d382aafbSBarry Smith address). 1973d382aafbSBarry Smith 1974d382aafbSBarry Smith M*/ 1975d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1976d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1977d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1978d382aafbSBarry Smith } while (0) 1979d382aafbSBarry Smith 1980d382aafbSBarry Smith /* 1981d382aafbSBarry Smith Determine if some of the kernel computation routines use 1982d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1983d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1984d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1985e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1986d382aafbSBarry Smith */ 1987d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1988d382aafbSBarry Smith 1989d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1990d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1991d382aafbSBarry Smith #endif 1992d382aafbSBarry Smith 19935a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19945a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1995d382aafbSBarry Smith #endif 1996d382aafbSBarry Smith 1997d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1998d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1999d382aafbSBarry Smith #endif 2000d382aafbSBarry Smith 2001d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2002d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2003d382aafbSBarry Smith #endif 2004d382aafbSBarry Smith 2005d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2006d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2007d382aafbSBarry Smith #endif 2008d382aafbSBarry Smith 2009d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2010d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2011d382aafbSBarry Smith #endif 2012d382aafbSBarry Smith 2013d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2014d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2015d382aafbSBarry Smith #endif 2016d382aafbSBarry Smith 2017d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2018d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2019d382aafbSBarry Smith #endif 2020d382aafbSBarry Smith 2021d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2022d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2023d382aafbSBarry Smith #endif 2024d382aafbSBarry Smith 2025d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2026d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2027d382aafbSBarry Smith #endif 2028d382aafbSBarry Smith 2029d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2030d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2031d382aafbSBarry Smith #endif 2032d382aafbSBarry Smith 2033d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2034d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2035d382aafbSBarry Smith #endif 2036d382aafbSBarry Smith 2037d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2038d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2039d382aafbSBarry Smith #endif 2040d382aafbSBarry Smith 2041d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2042d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2043d382aafbSBarry Smith #endif 2044d382aafbSBarry Smith 2045d382aafbSBarry Smith #endif 2046d382aafbSBarry Smith 2047d382aafbSBarry Smith /* 2048d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2049d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2050d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2051d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2052d382aafbSBarry Smith ugly extern "C" {} wrappers. 2053d382aafbSBarry Smith */ 2054d382aafbSBarry Smith #if defined(__cplusplus) 2055d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2056d382aafbSBarry Smith # define EXTERN_C_END } 2057d382aafbSBarry Smith #else 2058d382aafbSBarry Smith # define EXTERN_C_BEGIN 2059d382aafbSBarry Smith # define EXTERN_C_END 2060d382aafbSBarry Smith #endif 2061d382aafbSBarry Smith 2062d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2063d382aafbSBarry Smith 2064d382aafbSBarry Smith /*MC 2065d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2066d382aafbSBarry Smith communication 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith Level: beginner 2069d382aafbSBarry Smith 2070d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2071d382aafbSBarry Smith 2072d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2073d382aafbSBarry Smith M*/ 2074d382aafbSBarry Smith 2075d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2076014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2077014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2078c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2079c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2080c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2081c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2082d382aafbSBarry Smith #endif 2083d382aafbSBarry Smith 2084d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2085d382aafbSBarry Smith 2086d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2087d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2088d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2089d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2090d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2091d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2092d382aafbSBarry Smith 209361b0d812SBarry Smith /*@C 2094c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2095c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2096c73702f5SBarry Smith 2097c73702f5SBarry Smith Not Collective 2098c73702f5SBarry Smith 2099c73702f5SBarry Smith Input Parameter: 2100c73702f5SBarry Smith . a - the PetscInt64 value 2101c73702f5SBarry Smith 2102c73702f5SBarry Smith Output Parameter: 2103c73702f5SBarry Smith . b - the resulting PetscInt value 2104c73702f5SBarry Smith 2105c73702f5SBarry Smith Level: advanced 2106c73702f5SBarry Smith 2107c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2108c73702f5SBarry Smith 2109c73702f5SBarry Smith Not available from Fortran 2110c73702f5SBarry Smith 2111c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast() 2112c73702f5SBarry Smith @*/ 2113c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2114c73702f5SBarry Smith { 2115c73702f5SBarry Smith PetscFunctionBegin; 2116c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2117c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2118c73702f5SBarry Smith #endif 2119c73702f5SBarry Smith *b = (PetscInt)(a); 2120c73702f5SBarry Smith PetscFunctionReturn(0); 2121c73702f5SBarry Smith } 2122c73702f5SBarry Smith 2123c73702f5SBarry Smith /*@C 212461b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 212561b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 212661b0d812SBarry Smith 212761b0d812SBarry Smith Not Collective 212861b0d812SBarry Smith 212961b0d812SBarry Smith Input Parameter: 213061b0d812SBarry Smith . a - the PetscInt value 213161b0d812SBarry Smith 213261b0d812SBarry Smith Output Parameter: 213361b0d812SBarry Smith . b - the resulting PetscBLASInt value 213461b0d812SBarry Smith 213561b0d812SBarry Smith Level: advanced 213661b0d812SBarry Smith 21370bc7d38cSBarry Smith Notes: 21381fd49c25SBarry Smith Not available from Fortran 2139f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 21401fd49c25SBarry Smith 2141c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 214261b0d812SBarry Smith @*/ 2143c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2144c5df96a5SBarry Smith { 2145c5df96a5SBarry Smith PetscFunctionBegin; 2146c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 214773f49a0bSSatish Balay *b = 0; 2148c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2149c5df96a5SBarry Smith #endif 21500bc7d38cSBarry Smith if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2151c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2152c5df96a5SBarry Smith PetscFunctionReturn(0); 2153c5df96a5SBarry Smith } 2154c5df96a5SBarry Smith 215561b0d812SBarry Smith /*@C 215661b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 215761b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 215861b0d812SBarry Smith 215961b0d812SBarry Smith Not Collective 216061b0d812SBarry Smith 216161b0d812SBarry Smith Input Parameter: 216261b0d812SBarry Smith . a - the PetscInt value 216361b0d812SBarry Smith 216461b0d812SBarry Smith Output Parameter: 216561b0d812SBarry Smith . b - the resulting PetscMPIInt value 216661b0d812SBarry Smith 216761b0d812SBarry Smith Level: advanced 216861b0d812SBarry Smith 21691fd49c25SBarry Smith Not available from Fortran 21701fd49c25SBarry Smith 2171c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 217261b0d812SBarry Smith @*/ 21734dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 21744dc2109aSBarry Smith { 21754dc2109aSBarry Smith PetscFunctionBegin; 21764dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 217773f49a0bSSatish Balay *b = 0; 21784dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 21794dc2109aSBarry Smith #endif 2180c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21814dc2109aSBarry Smith PetscFunctionReturn(0); 21824dc2109aSBarry Smith } 21834dc2109aSBarry Smith 2184bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 21852f18eb33SBarry Smith 21862f18eb33SBarry Smith /*@C 21872f18eb33SBarry Smith 21882f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 21892f18eb33SBarry Smith 21902f18eb33SBarry Smith Not Collective 21912f18eb33SBarry Smith 21922f18eb33SBarry Smith Input Parameter: 21932f18eb33SBarry Smith + a - the PetscReal value 21942f18eb33SBarry Smith - b - the second value 21952f18eb33SBarry Smith 2196390e1bf2SBarry Smith Returns: 2197390e1bf2SBarry Smith the result as a PetscInt value 21982f18eb33SBarry Smith 2199bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22002f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22012f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22022f18eb33SBarry Smith 2203e28ce29aSPatrick Sanan Developers Note: 2204e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22052f18eb33SBarry Smith 22062f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22072f18eb33SBarry Smith 22081fd49c25SBarry Smith Not available from Fortran 22091fd49c25SBarry Smith 22102f18eb33SBarry Smith Level: advanced 22112f18eb33SBarry Smith 2212390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 22132f18eb33SBarry Smith @*/ 22142f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 22152f18eb33SBarry Smith { 2216bafee8b4SSatish Balay PetscInt64 r; 22172f18eb33SBarry Smith 2218bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 22192f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22202f18eb33SBarry Smith return (PetscInt) r; 22212f18eb33SBarry Smith } 22222f18eb33SBarry Smith 22232f18eb33SBarry Smith /*@C 22242f18eb33SBarry Smith 22252f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 22262f18eb33SBarry Smith 22272f18eb33SBarry Smith Not Collective 22282f18eb33SBarry Smith 22292f18eb33SBarry Smith Input Parameter: 22302f18eb33SBarry Smith + a - the PetscInt value 22312f18eb33SBarry Smith - b - the second value 22322f18eb33SBarry Smith 2233390e1bf2SBarry Smith Returns: 2234390e1bf2SBarry Smith the result as a PetscInt value 22352f18eb33SBarry Smith 2236bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22372f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 22382f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22392f18eb33SBarry Smith 22401fd49c25SBarry Smith Not available from Fortran 22411fd49c25SBarry Smith 22422f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22432f18eb33SBarry Smith 22442f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22452f18eb33SBarry Smith 22462f18eb33SBarry Smith Level: advanced 22472f18eb33SBarry Smith 2248390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 22492f18eb33SBarry Smith @*/ 22502f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 22512f18eb33SBarry Smith { 2252bafee8b4SSatish Balay PetscInt64 r; 22532f18eb33SBarry Smith 2254bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22552f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22562f18eb33SBarry Smith return (PetscInt) r; 22572f18eb33SBarry Smith } 22582f18eb33SBarry Smith 2259f91af8c7SBarry Smith /*@C 2260f91af8c7SBarry Smith 2261f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2262f91af8c7SBarry Smith 2263f91af8c7SBarry Smith Not Collective 2264f91af8c7SBarry Smith 2265f91af8c7SBarry Smith Input Parameter: 2266f91af8c7SBarry Smith + a - the PetscInt value 2267f91af8c7SBarry Smith - b - the second value 2268f91af8c7SBarry Smith 2269390e1bf2SBarry Smith Returns: 2270390e1bf2SBarry Smith the result as a PetscInt value 2271f91af8c7SBarry Smith 2272bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2273f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2274f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2275f91af8c7SBarry Smith 2276f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2277f91af8c7SBarry Smith 2278f5f57ec0SBarry Smith Not available from Fortran 2279f5f57ec0SBarry Smith 2280f91af8c7SBarry Smith Level: advanced 2281f91af8c7SBarry Smith 2282390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2283f91af8c7SBarry Smith @*/ 2284f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2285f91af8c7SBarry Smith { 2286bafee8b4SSatish Balay PetscInt64 r; 2287f91af8c7SBarry Smith 2288bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2289f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2290f91af8c7SBarry Smith return (PetscInt) r; 2291f91af8c7SBarry Smith } 2292f91af8c7SBarry Smith 22932f18eb33SBarry Smith /*@C 22942f18eb33SBarry Smith 22952f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 22962f18eb33SBarry Smith 22972f18eb33SBarry Smith Not Collective 22982f18eb33SBarry Smith 22992f18eb33SBarry Smith Input Parameter: 23002f18eb33SBarry Smith + a - the PetscInt value 23012f18eb33SBarry Smith - b - the second value 23022f18eb33SBarry Smith 23032f18eb33SBarry Smith Output Parameter:ma 2304390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 23052f18eb33SBarry Smith 2306bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 23072f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 23082f18eb33SBarry Smith 2309f5f57ec0SBarry Smith Not available from Fortran 2310f5f57ec0SBarry Smith 2311220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 23122f18eb33SBarry Smith 23132f18eb33SBarry Smith Level: advanced 23142f18eb33SBarry Smith 2315220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 23162f18eb33SBarry Smith @*/ 23172f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 23182f18eb33SBarry Smith { 2319bafee8b4SSatish Balay PetscInt64 r; 23202f18eb33SBarry Smith 23212f18eb33SBarry Smith PetscFunctionBegin; 2322bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23232f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 23242f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 23252f18eb33SBarry Smith #endif 2326f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2327f91af8c7SBarry Smith PetscFunctionReturn(0); 2328f91af8c7SBarry Smith } 2329f91af8c7SBarry Smith 2330f91af8c7SBarry Smith /*@C 2331f91af8c7SBarry Smith 2332fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2333f91af8c7SBarry Smith 2334f91af8c7SBarry Smith Not Collective 2335f91af8c7SBarry Smith 2336f91af8c7SBarry Smith Input Parameter: 2337f91af8c7SBarry Smith + a - the PetscInt value 2338f91af8c7SBarry Smith - b - the second value 2339f91af8c7SBarry Smith 2340f91af8c7SBarry Smith Output Parameter:ma 2341390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2342f91af8c7SBarry Smith 2343bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2344f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2345f91af8c7SBarry Smith 2346f5f57ec0SBarry Smith Not available from Fortran 2347f5f57ec0SBarry Smith 2348f91af8c7SBarry Smith Level: advanced 2349f91af8c7SBarry Smith 2350390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2351f91af8c7SBarry Smith @*/ 2352f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2353f91af8c7SBarry Smith { 2354bafee8b4SSatish Balay PetscInt64 r; 2355f91af8c7SBarry Smith 2356f91af8c7SBarry Smith PetscFunctionBegin; 2357bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2358f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2359f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2360f91af8c7SBarry Smith #endif 2361f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 23622f18eb33SBarry Smith PetscFunctionReturn(0); 23632f18eb33SBarry Smith } 2364c5df96a5SBarry Smith 2365d382aafbSBarry Smith /* 23662981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2367d382aafbSBarry Smith */ 2368d382aafbSBarry Smith #if defined(hz) 2369d382aafbSBarry Smith # undef hz 2370d382aafbSBarry Smith #endif 2371d382aafbSBarry Smith 237215a5570dSLisandro Dalcin #include <limits.h> 237315a5570dSLisandro Dalcin 237415a5570dSLisandro Dalcin /* The number of bits in a byte */ 237515a5570dSLisandro Dalcin 237615a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 237715a5570dSLisandro Dalcin 2378d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2379d382aafbSBarry Smith # include <sys/types.h> 2380d382aafbSBarry Smith #endif 2381d382aafbSBarry Smith 2382d382aafbSBarry Smith /*MC 2383d382aafbSBarry Smith 238466d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 238566d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 238666d79e26SBarry Smith 238766d79e26SBarry Smith 238866d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 238966d79e26SBarry Smith 239066d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 239166d79e26SBarry Smith 239266d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 239366d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 239466d79e26SBarry Smith 239566d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 239666d79e26SBarry Smith 239766d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 239866d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 239966d79e26SBarry Smith version number (x.y.z). 240066d79e26SBarry Smith 240166d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 240266d79e26SBarry Smith 240366d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 240466d79e26SBarry Smith 240566d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 240666d79e26SBarry Smith 240766d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 240866d79e26SBarry Smith 240966d79e26SBarry Smith Level: intermediate 241066d79e26SBarry Smith 241166d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 241266d79e26SBarry Smith 241366d79e26SBarry Smith M*/ 241466d79e26SBarry Smith 241566d79e26SBarry Smith /*MC 241666d79e26SBarry Smith 24171b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 24181b266c99SBarry Smith of every function and module definition you need something like 2419d382aafbSBarry Smith 2420d382aafbSBarry Smith $ 2421af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 24220f665fc7SPatrick Sanan $ use petscXXX 24231b266c99SBarry Smith 2424692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 24251b266c99SBarry Smith 2426d382aafbSBarry Smith $ XXX variablename 24271b266c99SBarry Smith $ type(tXXX) variablename 24281b266c99SBarry Smith 2429692afcd8SPatrick Sanan For example, 24301b266c99SBarry Smith 2431bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 24321b266c99SBarry Smith $ use petscvec 2433d382aafbSBarry Smith $ 2434692afcd8SPatrick Sanan $ Vec b 2435692afcd8SPatrick Sanan $ type(tVec) x 2436d382aafbSBarry Smith 2437d382aafbSBarry Smith Level: beginner 2438d382aafbSBarry Smith 2439d382aafbSBarry Smith M*/ 2440d382aafbSBarry Smith 2441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 244727710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24485f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2449d382aafbSBarry Smith 24506a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24516a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24526a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2454ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 245522ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2457f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 245860e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2459d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 24636c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 246417d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 246517d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 24675569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 246917df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 247139f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2473745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 247439f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 24786c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 24796c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2480e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2481ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2482ce605777SToby Isaac 24834d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2484676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2485676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2486676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 24874d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2488676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2489676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2490676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2491676f2a66SJacob Faibussowitsch 2492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2494d382aafbSBarry Smith 249576bdecfbSBarry Smith /*J 2496d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2497d382aafbSBarry Smith 2498d382aafbSBarry Smith Level: beginner 2499d382aafbSBarry Smith 2500e28ce29aSPatrick Sanan Notes: 2501e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 250225ccb61fSToby Isaac with the option --download-sprng or --download-random123 2503d382aafbSBarry Smith 25048f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 250576bdecfbSBarry Smith J*/ 250619fd82e9SBarry Smith typedef const char* PetscRandomType; 2507d382aafbSBarry Smith #define PETSCRAND "rand" 2508d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2509d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2510c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 251125ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2512d382aafbSBarry Smith 2513d382aafbSBarry Smith /* Logging support */ 2514014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2515d382aafbSBarry Smith 2516607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2517d382aafbSBarry Smith 2518d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2519140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2520d382aafbSBarry Smith 2521bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 252219fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 252419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2525fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2527d382aafbSBarry Smith 2528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2537d382aafbSBarry Smith 2538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 254597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 25468a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 254797540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2548d382aafbSBarry Smith 254930815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 255030815ce0SLisandro Dalcin 25519860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 25529860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2553f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2554f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2555014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2561014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2562c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2563e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2564c891a504SStefano Zampini #endif 2565d382aafbSBarry Smith 2566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2569d382aafbSBarry Smith 2570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2571014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2574014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 25762a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2577d382aafbSBarry Smith 2578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2583cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2584cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2585d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2586d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2587d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2588d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 25896afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 25906afbe7ddSJed Brown MPI_Request**,MPI_Request**, 25916afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 25926afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 25936afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2594d382aafbSBarry Smith 25956145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 25966145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 25976145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 25986145cd65SJed Brown 2599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2600d382aafbSBarry Smith 2601ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2602ce94432eSBarry Smith 260345487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 260445487dadSJed Brown 2605d382aafbSBarry Smith struct _n_PetscSubcomm { 2606d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2607d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2608306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 260945487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 261045487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2611708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 261245487dadSJed Brown PetscSubcommType type; 2613e5acf8a4SHong Zhang char *subcommprefix; 2614d382aafbSBarry Smith }; 2615d382aafbSBarry Smith 2616c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2617306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 261836be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 262365d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2624053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2625f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2626e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2627a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2628a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2629a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2630d382aafbSBarry Smith 26319962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 26329962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 26339962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 26349962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 26359962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 26369962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 26379962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 26389962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 26399962606eSBarry Smith 26405e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 26415f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 26425f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26435f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26445f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 26455e71baefSBarry Smith 2646a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2647a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2648a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2649a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2650a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2651a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2652a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2653a32e93adSJunchao Zhang 265413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 26550f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 265613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2657137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2658137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2659137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 266013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 266113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 26620f453b92SJed Brown 26635e71baefSBarry Smith 2664471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2665471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2666471ecdacSJed Brown * possible. */ 26676a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2668d382aafbSBarry Smith 26699de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 26709de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 26719de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 26729de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 26739de0f6ecSBarry Smith 2674ace2fbaeSBarry Smith #include <stdarg.h> 2675ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2676ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2677ace2fbaeSBarry Smith 2678268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2679fbfcfee5SBarry Smith 26801f817a21SBarry Smith /*@C 26811f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26821f817a21SBarry Smith 26831f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 26841f817a21SBarry Smith 26851f817a21SBarry Smith Input Parameters: 26861f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 26871f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 26881f817a21SBarry Smith 2689850545d0SSatish Balay Level: intermediate 2690850545d0SSatish Balay 2691f5f57ec0SBarry Smith Not available from Fortran 2692f5f57ec0SBarry Smith 26931f817a21SBarry Smith Options Database: 2694063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 26951f817a21SBarry Smith @*/ 2696dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2697dff31646SBarry Smith { 2698dff31646SBarry Smith size_t len; 2699dff31646SBarry Smith char *vstring; 2700dff31646SBarry Smith PetscErrorCode ierr; 2701dff31646SBarry Smith 27021f817a21SBarry Smith PetscFunctionBegin; 27038d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2704dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 270535005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2706580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2707dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27081f817a21SBarry Smith PetscFunctionReturn(0); 2709dff31646SBarry Smith } 2710dff31646SBarry Smith 2711b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2712fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2713fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2714f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2715fe278a28SBarry Smith 2716f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2717f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2718b967cddfSBarry Smith 27199f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27209f4d3c52SBarry Smith 272104102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2722763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2723dff31646SBarry Smith 272468e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27255dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2726d382aafbSBarry Smith 2727b2566f29SBarry Smith 2728b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2729b2566f29SBarry Smith /* 2730b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2731b2566f29SBarry Smith */ 27328f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 273377a5e07dSBarry Smith 273477a5e07dSBarry Smith /*MC 273577a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 273677a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 273777a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 273877a5e07dSBarry Smith 2739d083f849SBarry Smith Collective 274077a5e07dSBarry Smith 274177a5e07dSBarry Smith Synopsis: 274277a5e07dSBarry Smith #include <petscsys.h> 274377a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 274477a5e07dSBarry Smith 274577a5e07dSBarry Smith Input Parameters: 274677a5e07dSBarry Smith + indata - pointer to the input data to be reduced 274777a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 274877a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 274977a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 275077a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 275177a5e07dSBarry Smith 275277a5e07dSBarry Smith Output Parameter: 275377a5e07dSBarry Smith . outdata - the reduced values 275477a5e07dSBarry Smith 2755e28ce29aSPatrick Sanan Notes: 2756e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 275777a5e07dSBarry Smith 275877a5e07dSBarry Smith Level: developer 275977a5e07dSBarry Smith 276077a5e07dSBarry Smith .seealso: MPI_Allreduce() 276177a5e07dSBarry Smith M*/ 2762fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2763b2566f29SBarry Smith #else 2764b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2765b2566f29SBarry Smith #endif 2766b2566f29SBarry Smith 2767b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 27688198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 27698198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 27702f065d89SBarry Smith #endif 27718198064fSBarry Smith 277212801b39SBarry Smith /* 277312801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 277412801b39SBarry Smith */ 27758ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 27768ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 277712801b39SBarry Smith 2778d382aafbSBarry Smith #endif 2779