1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 11d382aafbSBarry Smith in the conf/variables definition of PETSC_INCLUDE 12d382aafbSBarry Smith */ 13d382aafbSBarry Smith #include "petscconf.h" 14d382aafbSBarry Smith #include "petscfix.h" 15d382aafbSBarry Smith 16d382aafbSBarry Smith /* ========================================================================== */ 17d382aafbSBarry Smith /* 18d382aafbSBarry Smith This facilitates using C version of PETSc from C++ and 19e2e64c6bSBarry Smith C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 20d382aafbSBarry Smith */ 21d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 22d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 23d382aafbSBarry Smith #endif 241ec50b02SJed Brown 251ec50b02SJed Brown #if defined(__cplusplus) 261ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 271ec50b02SJed Brown #else 281ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 291ec50b02SJed Brown #endif 30d382aafbSBarry Smith 31d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 32d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" { 33d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END } 34d382aafbSBarry Smith #else 35d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN 36d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END 37d382aafbSBarry Smith #endif 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 40d382aafbSBarry Smith Current PETSc version number and release date. Also listed in 41d382aafbSBarry Smith Web page 42d382aafbSBarry Smith src/docs/tex/manual/intro.tex, 43d382aafbSBarry Smith src/docs/tex/manual/manual.tex. 44d382aafbSBarry Smith src/docs/website/index.html. 45d382aafbSBarry Smith */ 46d382aafbSBarry Smith #include "petscversion.h" 47301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 48d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1) 49301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \ 50d382aafbSBarry Smith PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 51301d30feSBarry Smith PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE) 52d382aafbSBarry Smith #else 53301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s HG Date: %s", \ 54301d30feSBarry Smith PETSC_VERSION_HG, PETSC_VERSION_DATE_HG) 55d382aafbSBarry Smith #endif 56d382aafbSBarry Smith 57d382aafbSBarry Smith /*MC 58d382aafbSBarry Smith PetscGetVersion - Gets the PETSc version information in a string. 59d382aafbSBarry Smith 60d382aafbSBarry Smith Input Parameter: 61d382aafbSBarry Smith . len - length of the string 62d382aafbSBarry Smith 63d382aafbSBarry Smith Output Parameter: 64d382aafbSBarry Smith . version - version string 65d382aafbSBarry Smith 66d382aafbSBarry Smith Level: developer 67d382aafbSBarry Smith 68d382aafbSBarry Smith Usage: 69d382aafbSBarry Smith char version[256]; 70d382aafbSBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 71d382aafbSBarry Smith 72d382aafbSBarry Smith Fortran Note: 73d382aafbSBarry Smith This routine is not supported in Fortran. 74d382aafbSBarry Smith 75d382aafbSBarry Smith .seealso: PetscGetProgramName() 76d382aafbSBarry Smith 77d382aafbSBarry Smith M*/ 78d382aafbSBarry Smith 79d382aafbSBarry Smith /* ========================================================================== */ 80d382aafbSBarry Smith 81d382aafbSBarry Smith /* 82e2e64c6bSBarry Smith Fixes for ./configure time choices which impact our interface. Currently only 83d382aafbSBarry Smith calling conventions and extra compiler checking falls under this category. 84d382aafbSBarry Smith */ 85d382aafbSBarry Smith #if !defined(PETSC_STDCALL) 86d382aafbSBarry Smith #define PETSC_STDCALL 87d382aafbSBarry Smith #endif 88d382aafbSBarry Smith #if !defined(PETSC_TEMPLATE) 89d382aafbSBarry Smith #define PETSC_TEMPLATE 90d382aafbSBarry Smith #endif 91d382aafbSBarry Smith #if !defined(PETSC_HAVE_DLL_EXPORT) 92d382aafbSBarry Smith #define PETSC_DLL_EXPORT 93d382aafbSBarry Smith #define PETSC_DLL_IMPORT 94d382aafbSBarry Smith #endif 958738c821SJed Brown #if !defined(PETSCSYS_DLLEXPORT) 968738c821SJed Brown #define PETSCSYS_DLLEXPORT 97d382aafbSBarry Smith #endif 98d382aafbSBarry Smith #if !defined(PETSCVEC_DLLEXPORT) 99d382aafbSBarry Smith #define PETSCVEC_DLLEXPORT 100d382aafbSBarry Smith #endif 101d382aafbSBarry Smith #if !defined(PETSCMAT_DLLEXPORT) 102d382aafbSBarry Smith #define PETSCMAT_DLLEXPORT 103d382aafbSBarry Smith #endif 104d382aafbSBarry Smith #if !defined(PETSCDM_DLLEXPORT) 105d382aafbSBarry Smith #define PETSCDM_DLLEXPORT 106d382aafbSBarry Smith #endif 107d382aafbSBarry Smith #if !defined(PETSCKSP_DLLEXPORT) 108d382aafbSBarry Smith #define PETSCKSP_DLLEXPORT 109d382aafbSBarry Smith #endif 110d382aafbSBarry Smith #if !defined(PETSCSNES_DLLEXPORT) 111d382aafbSBarry Smith #define PETSCSNES_DLLEXPORT 112d382aafbSBarry Smith #endif 113d382aafbSBarry Smith #if !defined(PETSCTS_DLLEXPORT) 114d382aafbSBarry Smith #define PETSCTS_DLLEXPORT 115d382aafbSBarry Smith #endif 116d382aafbSBarry Smith #if !defined(PETSCFORTRAN_DLLEXPORT) 117d382aafbSBarry Smith #define PETSCFORTRAN_DLLEXPORT 118d382aafbSBarry Smith #endif 119d382aafbSBarry Smith /* ========================================================================== */ 120d382aafbSBarry Smith 121d382aafbSBarry Smith /* 122d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 123d382aafbSBarry Smith 124d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 125d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 126d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 127d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 128d382aafbSBarry Smith mpicxx.h directly in their code 129d382aafbSBarry Smith */ 130d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 131d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 132d382aafbSBarry Smith #include "mpi.h" 13365013866SBarry Smith 134d382aafbSBarry Smith /* 135d382aafbSBarry Smith Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 136d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 137d382aafbSBarry Smith 138d382aafbSBarry Smith The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense. 139d382aafbSBarry Smith */ 140d382aafbSBarry Smith #include <stdio.h> 141d382aafbSBarry Smith 142d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 143d382aafbSBarry Smith #if !defined(MPIAPI) 144d382aafbSBarry Smith #define MPIAPI 145d382aafbSBarry Smith #endif 146d382aafbSBarry Smith 147b3506946SBarry Smith 148d382aafbSBarry Smith /*MC 149d382aafbSBarry Smith PetscErrorCode - datatype used for return error code from all PETSc functions 150d382aafbSBarry Smith 151d382aafbSBarry Smith Level: beginner 152d382aafbSBarry Smith 153d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 154d382aafbSBarry Smith M*/ 155d382aafbSBarry Smith typedef int PetscErrorCode; 156d382aafbSBarry Smith 157d382aafbSBarry Smith /*MC 158d382aafbSBarry Smith 159503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 160d382aafbSBarry Smith (internal integer in the data structure used for error 161d382aafbSBarry Smith checking). These are all defined by an offset from the lowest 1620700a824SBarry Smith one, PETSC_SMALLEST_CLASSID. 163d382aafbSBarry Smith 164d382aafbSBarry Smith Level: advanced 165d382aafbSBarry Smith 1660700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 167d382aafbSBarry Smith M*/ 1680700a824SBarry Smith typedef int PetscClassId; 169d382aafbSBarry Smith 170d382aafbSBarry Smith 171d382aafbSBarry Smith /*MC 172d382aafbSBarry Smith PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 173d382aafbSBarry Smith 174d382aafbSBarry Smith Level: intermediate 175d382aafbSBarry Smith 176d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 1773b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 1783b2a8c54SBarry Smith (except on very rare BLAS/LAPACK implementations that support 64 bit integers). 1793b2a8c54SBarry Smith 1803b2a8c54SBarry Smith PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 1813b2a8c54SBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 1823b2a8c54SBarry Smith 1833b2a8c54SBarry Smith PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 1843b2a8c54SBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 185d382aafbSBarry Smith 186d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt 187d382aafbSBarry Smith 188d382aafbSBarry Smith M*/ 189d382aafbSBarry Smith typedef int PetscBLASInt; 190d382aafbSBarry Smith 191d382aafbSBarry Smith /*MC 192d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 193d382aafbSBarry Smith 194d382aafbSBarry Smith Level: intermediate 195d382aafbSBarry Smith 196d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 1973b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 198d382aafbSBarry Smith 1993b2a8c54SBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 200d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 201d382aafbSBarry Smith 2023b2a8c54SBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 203d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 204d382aafbSBarry Smith 205d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 206d382aafbSBarry Smith 207d382aafbSBarry Smith M*/ 208d382aafbSBarry Smith typedef int PetscMPIInt; 209d382aafbSBarry Smith 210d382aafbSBarry Smith /*MC 211d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 212d382aafbSBarry Smith 213d382aafbSBarry Smith Level: intermediate 214d382aafbSBarry Smith 215d382aafbSBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 216d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 217d382aafbSBarry Smith 218d382aafbSBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 219d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 220d382aafbSBarry Smith 221d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 222d382aafbSBarry Smith M*/ 223d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 224d382aafbSBarry Smith 225d382aafbSBarry Smith /*MC 226d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 2273b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 228d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 229d382aafbSBarry Smith 230d382aafbSBarry Smith Level: intermediate 231d382aafbSBarry Smith 232d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 233d382aafbSBarry Smith M*/ 234d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 235d382aafbSBarry Smith typedef long long PetscInt; 236d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT 237d382aafbSBarry Smith #else 238d382aafbSBarry Smith typedef int PetscInt; 239d382aafbSBarry Smith #define MPIU_INT MPI_INT 240d382aafbSBarry Smith #endif 241d382aafbSBarry Smith 24258b60935SBarry Smith /*EC 24358b60935SBarry Smith 24458b60935SBarry Smith PetscPrecision - indicates what precision the object is using 24558b60935SBarry Smith 24658b60935SBarry Smith Level: advanced 24758b60935SBarry Smith 24858b60935SBarry Smith .seealso: PetscObjectSetPrecision() 24958b60935SBarry Smith E*/ 25058b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision; 25158b60935SBarry Smith extern const char *PetscPrecisions[]; 25258b60935SBarry Smith 25358b60935SBarry Smith 254503cfb0cSBarry Smith /* 255503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 256503cfb0cSBarry Smith */ 257d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 258d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT 259d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 260d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG 261d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 262d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT 263d382aafbSBarry Smith #else 264d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 265d382aafbSBarry Smith #endif 266d382aafbSBarry Smith 267d382aafbSBarry Smith 268d382aafbSBarry Smith /* 269d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 270d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 271d382aafbSBarry Smith */ 272d382aafbSBarry Smith 273d382aafbSBarry Smith extern FILE* PETSC_STDOUT; 274d382aafbSBarry Smith 275d382aafbSBarry Smith /* 276d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 277d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 278d382aafbSBarry Smith */ 279d382aafbSBarry Smith extern FILE* PETSC_STDERR; 280d382aafbSBarry Smith 281d382aafbSBarry Smith /* 282d382aafbSBarry Smith PETSC_ZOPEFD is used to send data to the PETSc webpage. It can be used 283d382aafbSBarry Smith in conjunction with PETSC_STDOUT, or by itself. 284d382aafbSBarry Smith */ 285d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD; 286d382aafbSBarry Smith 287d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 288d382aafbSBarry Smith /*MC 289d382aafbSBarry Smith PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of 290d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 291d382aafbSBarry Smith 292d382aafbSBarry Smith Synopsis: 293d382aafbSBarry Smith PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function)) 294d382aafbSBarry Smith 295eca87e8dSBarry Smith Not collective 296eca87e8dSBarry Smith 297d382aafbSBarry Smith Level: developer 298d382aafbSBarry Smith 299d382aafbSBarry Smith Example: 300d382aafbSBarry Smith PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine 301d382aafbSBarry Smith PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r) 302d382aafbSBarry Smith 303d382aafbSBarry Smith .seealso: PetscPolymorphicFunction() 304d382aafbSBarry Smith 305d382aafbSBarry Smith M*/ 306d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;} 307d382aafbSBarry Smith 308d382aafbSBarry Smith /*MC 309d382aafbSBarry Smith PetscPolymorphicScalar - allows defining a C++ polymorphic version of 310d382aafbSBarry Smith a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument 311d382aafbSBarry Smith 312d382aafbSBarry Smith Synopsis: 313d382aafbSBarry Smith PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function)) 314d382aafbSBarry Smith 315eca87e8dSBarry Smith Not collective 316eca87e8dSBarry Smith 317d382aafbSBarry Smith Level: developer 318d382aafbSBarry Smith 319d382aafbSBarry Smith Example: 320d382aafbSBarry Smith PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine 321d382aafbSBarry Smith PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);} 322d382aafbSBarry Smith 323d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine() 324d382aafbSBarry Smith 325d382aafbSBarry Smith M*/ 326d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;} 327d382aafbSBarry Smith 328d382aafbSBarry Smith /*MC 329d382aafbSBarry Smith PetscPolymorphicFunction - allows defining a C++ polymorphic version of 330d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 331d382aafbSBarry Smith and returns the computed value (istead of an error code) 332d382aafbSBarry Smith 333d382aafbSBarry Smith Synopsis: 334d382aafbSBarry Smith PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name) 335d382aafbSBarry Smith 336eca87e8dSBarry Smith Not collective 337eca87e8dSBarry Smith 338d382aafbSBarry Smith Level: developer 339d382aafbSBarry Smith 340d382aafbSBarry Smith Example: 341d382aafbSBarry Smith PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine 342d382aafbSBarry Smith PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;} 343d382aafbSBarry Smith 344d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine() 345d382aafbSBarry Smith 346d382aafbSBarry Smith M*/ 347d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;} 348d382aafbSBarry Smith 349d382aafbSBarry Smith #else 350d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) 351d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) 352d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) 353d382aafbSBarry Smith #endif 354d382aafbSBarry Smith 355d382aafbSBarry Smith /*MC 356d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 357d382aafbSBarry Smith 358d382aafbSBarry Smith Synopsis: 359ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 360d382aafbSBarry Smith 361eca87e8dSBarry Smith Not Collective 362eca87e8dSBarry Smith 363d382aafbSBarry Smith Input Parameters: 364d382aafbSBarry Smith . cond - condition or expression 365d382aafbSBarry Smith 366d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 367d382aafbSBarry Smith branch is unlikely. 368d382aafbSBarry Smith 369d382aafbSBarry Smith Level: advanced 370d382aafbSBarry Smith 371d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 372d382aafbSBarry Smith M*/ 373d382aafbSBarry Smith 374d382aafbSBarry Smith /*MC 375d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 376d382aafbSBarry Smith 377d382aafbSBarry Smith Synopsis: 378ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 379d382aafbSBarry Smith 380eca87e8dSBarry Smith Not Collective 381eca87e8dSBarry Smith 382d382aafbSBarry Smith Input Parameters: 383d382aafbSBarry Smith . cond - condition or expression 384d382aafbSBarry Smith 385d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 386d382aafbSBarry Smith branch is likely. 387d382aafbSBarry Smith 388d382aafbSBarry Smith Level: advanced 389d382aafbSBarry Smith 390d382aafbSBarry Smith .seealso: PetscUnlikely() 391d382aafbSBarry Smith M*/ 392d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 393d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 394d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 395d382aafbSBarry Smith #else 396cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 397cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 398d382aafbSBarry Smith #endif 399d382aafbSBarry Smith 400d382aafbSBarry Smith /* 401d382aafbSBarry Smith Extern indicates a PETSc function defined elsewhere 402d382aafbSBarry Smith */ 403d382aafbSBarry Smith #if !defined(EXTERN) 404d382aafbSBarry Smith #define EXTERN extern 405d382aafbSBarry Smith #endif 406d382aafbSBarry Smith 407d382aafbSBarry Smith /* 408d382aafbSBarry Smith Defines some elementary mathematics functions and constants. 409d382aafbSBarry Smith */ 410d382aafbSBarry Smith #include "petscmath.h" 411d382aafbSBarry Smith 412d382aafbSBarry Smith /* 413d382aafbSBarry Smith Declare extern C stuff after including external header files 414d382aafbSBarry Smith */ 415d382aafbSBarry Smith 416d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN 417d382aafbSBarry Smith 418d382aafbSBarry Smith /* 419d382aafbSBarry Smith Basic PETSc constants 420d382aafbSBarry Smith */ 421d382aafbSBarry Smith 422d382aafbSBarry Smith /*E 423ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 424d382aafbSBarry Smith 425d382aafbSBarry Smith Level: beginner 426d382aafbSBarry Smith 427ace3abfcSBarry Smith Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 42834e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 42934e82e7dSBarry Smith 430d382aafbSBarry Smith E*/ 431ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 432ace3abfcSBarry Smith extern const char *PetscBools[]; 43370b3c8c7SBarry Smith 43470b3c8c7SBarry Smith /*E 43570b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 43670b3c8c7SBarry Smith 43770b3c8c7SBarry Smith Level: beginner 43870b3c8c7SBarry Smith 43970b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 44070b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 44170b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 44270b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 44370b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 44470b3c8c7SBarry Smith 44570b3c8c7SBarry Smith E*/ 44670b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 44770b3c8c7SBarry Smith extern const char *PetscCopyModes[]; 448d382aafbSBarry Smith 449d382aafbSBarry Smith /*MC 450ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 451d382aafbSBarry Smith 452d382aafbSBarry Smith Level: beginner 453d382aafbSBarry Smith 454d382aafbSBarry Smith Note: Zero integer 455d382aafbSBarry Smith 456ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE 457d382aafbSBarry Smith M*/ 458d382aafbSBarry Smith 459d382aafbSBarry Smith /*MC 460ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 461d382aafbSBarry Smith 462d382aafbSBarry Smith Level: beginner 463d382aafbSBarry Smith 464d382aafbSBarry Smith Note: Nonzero integer 465d382aafbSBarry Smith 466ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE 467d382aafbSBarry Smith M*/ 468d382aafbSBarry Smith 469d382aafbSBarry Smith /*MC 470d382aafbSBarry Smith PETSC_YES - Alias for PETSC_TRUE 471d382aafbSBarry Smith 472d382aafbSBarry Smith Level: beginner 473d382aafbSBarry Smith 474d382aafbSBarry Smith Note: Zero integer 475d382aafbSBarry Smith 476ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE, PETSC_FALSE, PETSC_NO 477d382aafbSBarry Smith M*/ 478d382aafbSBarry Smith #define PETSC_YES PETSC_TRUE 479d382aafbSBarry Smith 480d382aafbSBarry Smith /*MC 481d382aafbSBarry Smith PETSC_NO - Alias for PETSC_FALSE 482d382aafbSBarry Smith 483d382aafbSBarry Smith Level: beginner 484d382aafbSBarry Smith 485d382aafbSBarry Smith Note: Nonzero integer 486d382aafbSBarry Smith 487ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE, PETSC_FALSE, PETSC_YES 488d382aafbSBarry Smith M*/ 489d382aafbSBarry Smith #define PETSC_NO PETSC_FALSE 490d382aafbSBarry Smith 491d382aafbSBarry Smith /*MC 492d382aafbSBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer 493d382aafbSBarry Smith 494d382aafbSBarry Smith Level: beginner 495d382aafbSBarry Smith 496d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 497d382aafbSBarry Smith some default 498d382aafbSBarry Smith 499d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 500503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 501d382aafbSBarry Smith 50234e82e7dSBarry Smith Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under 50334e82e7dSBarry Smith different versions of Unix. It is tricky to insure the correct include file is always included. 50434e82e7dSBarry Smith 505d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 506d382aafbSBarry Smith 507d382aafbSBarry Smith M*/ 508d382aafbSBarry Smith #define PETSC_NULL 0 509d382aafbSBarry Smith 510d382aafbSBarry Smith /*MC 511d382aafbSBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 512d382aafbSBarry Smith where you wish PETSc to use the default. 513d382aafbSBarry Smith 514d382aafbSBarry Smith Level: beginner 515d382aafbSBarry Smith 516d382aafbSBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 517d382aafbSBarry Smith 518d382aafbSBarry Smith M*/ 519d382aafbSBarry Smith #define PETSC_DECIDE -1 520d382aafbSBarry Smith 521d382aafbSBarry Smith /*MC 522d382aafbSBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 523d382aafbSBarry Smith where you wish PETSc to use the default. 524d382aafbSBarry Smith 525d382aafbSBarry Smith Level: beginner 526d382aafbSBarry Smith 527d382aafbSBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 528d382aafbSBarry Smith 529d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 530d382aafbSBarry Smith 531d382aafbSBarry Smith M*/ 532d382aafbSBarry Smith #define PETSC_DEFAULT -2 533d382aafbSBarry Smith 534d382aafbSBarry Smith 535d382aafbSBarry Smith /*MC 536d382aafbSBarry Smith PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 537d382aafbSBarry Smith 538d382aafbSBarry Smith Level: beginner 539d382aafbSBarry Smith 540d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 541d382aafbSBarry Smith some default 542d382aafbSBarry Smith 543d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 544d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 545d382aafbSBarry Smith 546d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 547d382aafbSBarry Smith 548d382aafbSBarry Smith M*/ 549d382aafbSBarry Smith #define PETSC_IGNORE PETSC_NULL 550d382aafbSBarry Smith 551d382aafbSBarry Smith /*MC 552d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 553d382aafbSBarry Smith where you wish PETSc to compute the required value. 554d382aafbSBarry Smith 555d382aafbSBarry Smith Level: beginner 556d382aafbSBarry Smith 557d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 558d382aafbSBarry Smith 559d382aafbSBarry Smith M*/ 560d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 561d382aafbSBarry Smith 562d382aafbSBarry Smith /*MC 563d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 564d382aafbSBarry Smith all the processs that PETSc knows about. 565d382aafbSBarry Smith 566d382aafbSBarry Smith Level: beginner 567d382aafbSBarry Smith 568d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 569d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 570d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 571d382aafbSBarry Smith PetscInitialize() 572d382aafbSBarry Smith 573d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 574d382aafbSBarry Smith 575d382aafbSBarry Smith M*/ 576d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD; 577d382aafbSBarry Smith 578d382aafbSBarry Smith /*MC 579503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 580d382aafbSBarry Smith 581d382aafbSBarry Smith Level: beginner 582d382aafbSBarry Smith 583d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 584d382aafbSBarry Smith 585d382aafbSBarry Smith M*/ 586d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 587d382aafbSBarry Smith 588ace3abfcSBarry Smith extern PETSCSYS_DLLEXPORT PetscBool PetscInitializeCalled; 589ace3abfcSBarry Smith extern PETSCSYS_DLLEXPORT PetscBool PetscFinalizeCalled; 590d382aafbSBarry Smith 5918738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 5928738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 5938738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommDestroy(MPI_Comm*); 594d382aafbSBarry Smith 595d382aafbSBarry Smith /*MC 596d382aafbSBarry Smith PetscMalloc - Allocates memory 597d382aafbSBarry Smith 598eca87e8dSBarry Smith Synopsis: 599eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 600eca87e8dSBarry Smith 601eca87e8dSBarry Smith Not Collective 602eca87e8dSBarry Smith 603d382aafbSBarry Smith Input Parameter: 604d382aafbSBarry Smith . m - number of bytes to allocate 605d382aafbSBarry Smith 606d382aafbSBarry Smith Output Parameter: 607d382aafbSBarry Smith . result - memory allocated 608d382aafbSBarry Smith 609d382aafbSBarry Smith Level: beginner 610d382aafbSBarry Smith 611d382aafbSBarry Smith Notes: Memory is always allocated at least double aligned 612d382aafbSBarry Smith 613d382aafbSBarry Smith If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 614d382aafbSBarry Smith properly handle not freeing the null pointer. 615d382aafbSBarry Smith 616d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 617d382aafbSBarry Smith 618d382aafbSBarry Smith Concepts: memory allocation 619d382aafbSBarry Smith 620d382aafbSBarry Smith M*/ 6212714b66aSJed Brown #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 622d382aafbSBarry Smith 623d382aafbSBarry Smith /*MC 624503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 625d382aafbSBarry Smith 626d382aafbSBarry Smith Synopsis: 627d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 628d382aafbSBarry Smith 629eca87e8dSBarry Smith Not Collective 630eca87e8dSBarry Smith 631eca87e8dSBarry Smith Input Parameters: 632eca87e8dSBarry Smith . addr - address to align (any pointer type) 633eca87e8dSBarry Smith 634d382aafbSBarry Smith Level: developer 635d382aafbSBarry Smith 636d382aafbSBarry Smith .seealso: PetscMallocAlign() 637d382aafbSBarry Smith 638d382aafbSBarry Smith Concepts: memory allocation 639d382aafbSBarry Smith M*/ 640d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 641d382aafbSBarry Smith 642d382aafbSBarry Smith /*MC 643503cfb0cSBarry Smith PetscMalloc2 - Allocates 2 chunks of memory both aligned to PETSC_MEMALIGN 644d382aafbSBarry Smith 645eca87e8dSBarry Smith Synopsis: 646eca87e8dSBarry Smith PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 647eca87e8dSBarry Smith 648eca87e8dSBarry Smith Not Collective 649eca87e8dSBarry Smith 650d382aafbSBarry Smith Input Parameter: 651d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 652d382aafbSBarry Smith . t1 - type of first memory elements 653d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 654d382aafbSBarry Smith - t2 - type of second memory elements 655d382aafbSBarry Smith 656d382aafbSBarry Smith Output Parameter: 657d382aafbSBarry Smith + r1 - memory allocated in first chunk 658d382aafbSBarry Smith - r2 - memory allocated in second chunk 659d382aafbSBarry Smith 660d382aafbSBarry Smith Level: developer 661d382aafbSBarry Smith 662d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 663d382aafbSBarry Smith 664d382aafbSBarry Smith Concepts: memory allocation 665d382aafbSBarry Smith 666d382aafbSBarry Smith M*/ 667d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 668d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 669d382aafbSBarry Smith #else 6703b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \ 671d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 672d382aafbSBarry Smith #endif 673d382aafbSBarry Smith 674d382aafbSBarry Smith /*MC 675503cfb0cSBarry Smith PetscMalloc3 - Allocates 3 chunks of memory all aligned to PETSC_MEMALIGN 676d382aafbSBarry Smith 677eca87e8dSBarry Smith Synopsis: 678eca87e8dSBarry Smith PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 679eca87e8dSBarry Smith 680eca87e8dSBarry Smith Not Collective 681eca87e8dSBarry Smith 682d382aafbSBarry Smith Input Parameter: 683d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 684d382aafbSBarry Smith . t1 - type of first memory elements 685d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 686d382aafbSBarry Smith . t2 - type of second memory elements 687d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 688d382aafbSBarry Smith - t3 - type of third memory elements 689d382aafbSBarry Smith 690d382aafbSBarry Smith Output Parameter: 691d382aafbSBarry Smith + r1 - memory allocated in first chunk 692d382aafbSBarry Smith . r2 - memory allocated in second chunk 693d382aafbSBarry Smith - r3 - memory allocated in third chunk 694d382aafbSBarry Smith 695d382aafbSBarry Smith Level: developer 696d382aafbSBarry Smith 697d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 698d382aafbSBarry Smith 699d382aafbSBarry Smith Concepts: memory allocation 700d382aafbSBarry Smith 701d382aafbSBarry Smith M*/ 702d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 703d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 704d382aafbSBarry Smith #else 7053b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 706d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 707d382aafbSBarry Smith #endif 708d382aafbSBarry Smith 709d382aafbSBarry Smith /*MC 710503cfb0cSBarry Smith PetscMalloc4 - Allocates 4 chunks of memory all aligned to PETSC_MEMALIGN 711d382aafbSBarry Smith 712eca87e8dSBarry Smith Synopsis: 713eca87e8dSBarry Smith PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 714eca87e8dSBarry Smith 715eca87e8dSBarry Smith Not Collective 716eca87e8dSBarry Smith 717d382aafbSBarry Smith Input Parameter: 718d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 719d382aafbSBarry Smith . t1 - type of first memory elements 720d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 721d382aafbSBarry Smith . t2 - type of second memory elements 722d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 723d382aafbSBarry Smith . t3 - type of third memory elements 724d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 725d382aafbSBarry Smith - t4 - type of fourth memory elements 726d382aafbSBarry Smith 727d382aafbSBarry Smith Output Parameter: 728d382aafbSBarry Smith + r1 - memory allocated in first chunk 729d382aafbSBarry Smith . r2 - memory allocated in second chunk 730d382aafbSBarry Smith . r3 - memory allocated in third chunk 731d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 732d382aafbSBarry Smith 733d382aafbSBarry Smith Level: developer 734d382aafbSBarry Smith 735d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 736d382aafbSBarry Smith 737d382aafbSBarry Smith Concepts: memory allocation 738d382aafbSBarry Smith 739d382aafbSBarry Smith M*/ 740d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 741d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 742d382aafbSBarry Smith #else 743d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 7443b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 745d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 746d382aafbSBarry Smith #endif 747d382aafbSBarry Smith 748d382aafbSBarry Smith /*MC 749503cfb0cSBarry Smith PetscMalloc5 - Allocates 5 chunks of memory all aligned to PETSC_MEMALIGN 750d382aafbSBarry Smith 751eca87e8dSBarry Smith Synopsis: 752eca87e8dSBarry Smith PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 753eca87e8dSBarry Smith 754eca87e8dSBarry Smith Not Collective 755eca87e8dSBarry Smith 756d382aafbSBarry Smith Input Parameter: 757d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 758d382aafbSBarry Smith . t1 - type of first memory elements 759d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 760d382aafbSBarry Smith . t2 - type of second memory elements 761d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 762d382aafbSBarry Smith . t3 - type of third memory elements 763d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 764d382aafbSBarry Smith . t4 - type of fourth memory elements 765d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 766d382aafbSBarry Smith - t5 - type of fifth memory elements 767d382aafbSBarry Smith 768d382aafbSBarry Smith Output Parameter: 769d382aafbSBarry Smith + r1 - memory allocated in first chunk 770d382aafbSBarry Smith . r2 - memory allocated in second chunk 771d382aafbSBarry Smith . r3 - memory allocated in third chunk 772d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 773d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 774d382aafbSBarry Smith 775d382aafbSBarry Smith Level: developer 776d382aafbSBarry Smith 777d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 778d382aafbSBarry Smith 779d382aafbSBarry Smith Concepts: memory allocation 780d382aafbSBarry Smith 781d382aafbSBarry Smith M*/ 782d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 783d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 784d382aafbSBarry Smith #else 785d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 7863b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 787d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 788d382aafbSBarry Smith #endif 789d382aafbSBarry Smith 790d382aafbSBarry Smith 791d382aafbSBarry Smith /*MC 792503cfb0cSBarry Smith PetscMalloc6 - Allocates 6 chunks of memory all aligned to PETSC_MEMALIGN 793d382aafbSBarry Smith 794eca87e8dSBarry Smith Synopsis: 795eca87e8dSBarry Smith PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 796eca87e8dSBarry Smith 797eca87e8dSBarry Smith Not Collective 798eca87e8dSBarry Smith 799d382aafbSBarry Smith Input Parameter: 800d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 801d382aafbSBarry Smith . t1 - type of first memory elements 802d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 803d382aafbSBarry Smith . t2 - type of second memory elements 804d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 805d382aafbSBarry Smith . t3 - type of third memory elements 806d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 807d382aafbSBarry Smith . t4 - type of fourth memory elements 808d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 809d382aafbSBarry Smith . t5 - type of fifth memory elements 810d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 811d382aafbSBarry Smith - t6 - type of sixth memory elements 812d382aafbSBarry Smith 813d382aafbSBarry Smith Output Parameter: 814d382aafbSBarry Smith + r1 - memory allocated in first chunk 815d382aafbSBarry Smith . r2 - memory allocated in second chunk 816d382aafbSBarry Smith . r3 - memory allocated in third chunk 817d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 818d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 819d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 820d382aafbSBarry Smith 821d382aafbSBarry Smith Level: developer 822d382aafbSBarry Smith 823d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 824d382aafbSBarry Smith 825d382aafbSBarry Smith Concepts: memory allocation 826d382aafbSBarry Smith 827d382aafbSBarry Smith M*/ 828d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 829d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 830d382aafbSBarry Smith #else 831d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 8323b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 833d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 834d382aafbSBarry Smith #endif 835d382aafbSBarry Smith 836d382aafbSBarry Smith /*MC 837503cfb0cSBarry Smith PetscMalloc7 - Allocates 7 chunks of memory all aligned to PETSC_MEMALIGN 838d382aafbSBarry Smith 839eca87e8dSBarry Smith Synopsis: 840eca87e8dSBarry Smith PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 841eca87e8dSBarry Smith 842eca87e8dSBarry Smith Not Collective 843eca87e8dSBarry Smith 844d382aafbSBarry Smith Input Parameter: 845d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 846d382aafbSBarry Smith . t1 - type of first memory elements 847d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 848d382aafbSBarry Smith . t2 - type of second memory elements 849d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 850d382aafbSBarry Smith . t3 - type of third memory elements 851d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 852d382aafbSBarry Smith . t4 - type of fourth memory elements 853d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 854d382aafbSBarry Smith . t5 - type of fifth memory elements 855d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 856d382aafbSBarry Smith . t6 - type of sixth memory elements 857d382aafbSBarry Smith . m7 - number of elements to allocate in 7th chunk (may be zero) 858d382aafbSBarry Smith - t7 - type of sixth memory elements 859d382aafbSBarry Smith 860d382aafbSBarry Smith Output Parameter: 861d382aafbSBarry Smith + r1 - memory allocated in first chunk 862d382aafbSBarry Smith . r2 - memory allocated in second chunk 863d382aafbSBarry Smith . r3 - memory allocated in third chunk 864d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 865d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 866d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 867eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 868d382aafbSBarry Smith 869d382aafbSBarry Smith Level: developer 870d382aafbSBarry Smith 871d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 872d382aafbSBarry Smith 873d382aafbSBarry Smith Concepts: memory allocation 874d382aafbSBarry Smith 875d382aafbSBarry Smith M*/ 876d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 877d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 878d382aafbSBarry Smith #else 879d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 8803b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 881d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 882d382aafbSBarry Smith #endif 883d382aafbSBarry Smith 884d382aafbSBarry Smith /*MC 885503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 886d382aafbSBarry Smith 887eca87e8dSBarry Smith Synopsis: 888eca87e8dSBarry Smith PetscErrorCode PetscNew(struct type,((type *))result) 889eca87e8dSBarry Smith 890eca87e8dSBarry Smith Not Collective 891eca87e8dSBarry Smith 892d382aafbSBarry Smith Input Parameter: 893d382aafbSBarry Smith . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 894d382aafbSBarry Smith 895d382aafbSBarry Smith Output Parameter: 896d382aafbSBarry Smith . result - memory allocated 897d382aafbSBarry Smith 898d382aafbSBarry Smith Level: beginner 899d382aafbSBarry Smith 900ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog() 901d382aafbSBarry Smith 902d382aafbSBarry Smith Concepts: memory allocation 903d382aafbSBarry Smith 904d382aafbSBarry Smith M*/ 905d382aafbSBarry Smith #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 906ad0619ddSBarry Smith 907ad0619ddSBarry Smith /*MC 908ad0619ddSBarry Smith PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 909ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 910ad0619ddSBarry Smith 911ad0619ddSBarry Smith Synopsis: 912ad0619ddSBarry Smith PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result) 913ad0619ddSBarry Smith 914ad0619ddSBarry Smith Not Collective 915ad0619ddSBarry Smith 916ad0619ddSBarry Smith Input Parameter: 917ad0619ddSBarry Smith + obj - object memory is logged to 918ad0619ddSBarry Smith - type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 919ad0619ddSBarry Smith 920ad0619ddSBarry Smith Output Parameter: 921ad0619ddSBarry Smith . result - memory allocated 922ad0619ddSBarry Smith 923ad0619ddSBarry Smith Level: developer 924ad0619ddSBarry Smith 925ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory() 926ad0619ddSBarry Smith 927ad0619ddSBarry Smith Concepts: memory allocation 928ad0619ddSBarry Smith 929ad0619ddSBarry Smith M*/ 930d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 931d382aafbSBarry Smith 932d382aafbSBarry Smith /*MC 933d382aafbSBarry Smith PetscFree - Frees memory 934d382aafbSBarry Smith 935eca87e8dSBarry Smith Synopsis: 936eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 937eca87e8dSBarry Smith 938eca87e8dSBarry Smith Not Collective 939eca87e8dSBarry Smith 940d382aafbSBarry Smith Input Parameter: 941d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 942d382aafbSBarry Smith 943d382aafbSBarry Smith Level: beginner 944d382aafbSBarry Smith 945d382aafbSBarry Smith Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 946d382aafbSBarry Smith 947d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 948d382aafbSBarry Smith 949d382aafbSBarry Smith Concepts: memory allocation 950d382aafbSBarry Smith 951d382aafbSBarry Smith M*/ 95281dabb53SJed Brown #define PetscFree(a) ((a) ? ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || (((a) = 0),0)) : 0) 953d382aafbSBarry Smith 954d382aafbSBarry Smith /*MC 955d382aafbSBarry Smith PetscFreeVoid - Frees memory 956d382aafbSBarry Smith 957d382aafbSBarry Smith Synopsis: 958d382aafbSBarry Smith void PetscFreeVoid(void *memory) 959d382aafbSBarry Smith 960eca87e8dSBarry Smith Not Collective 961eca87e8dSBarry Smith 962eca87e8dSBarry Smith Input Parameter: 963eca87e8dSBarry Smith . memory - memory to free 964eca87e8dSBarry Smith 965d382aafbSBarry Smith Level: beginner 966d382aafbSBarry Smith 967d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 968d382aafbSBarry Smith 969d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 970d382aafbSBarry Smith 971d382aafbSBarry Smith Concepts: memory allocation 972d382aafbSBarry Smith 973d382aafbSBarry Smith M*/ 9742714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0) 975d382aafbSBarry Smith 976d382aafbSBarry Smith 977d382aafbSBarry Smith /*MC 978d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 979d382aafbSBarry Smith 980eca87e8dSBarry Smith Synopsis: 981eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 982eca87e8dSBarry Smith 983eca87e8dSBarry Smith Not Collective 984eca87e8dSBarry Smith 985d382aafbSBarry Smith Input Parameter: 986d382aafbSBarry Smith + memory1 - memory to free 987d382aafbSBarry Smith - memory2 - 2nd memory to free 988d382aafbSBarry Smith 989d382aafbSBarry Smith Level: developer 990d382aafbSBarry Smith 991d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 992d382aafbSBarry Smith 993d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 994d382aafbSBarry Smith 995d382aafbSBarry Smith Concepts: memory allocation 996d382aafbSBarry Smith 997d382aafbSBarry Smith M*/ 998d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 999d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 1000d382aafbSBarry Smith #else 100181dabb53SJed Brown #define PetscFree2(m1,m2) ((m2)=0, PetscFree(m1)) 1002d382aafbSBarry Smith #endif 1003d382aafbSBarry Smith 1004d382aafbSBarry Smith /*MC 1005d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1006d382aafbSBarry Smith 1007eca87e8dSBarry Smith Synopsis: 1008eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1009eca87e8dSBarry Smith 1010eca87e8dSBarry Smith Not Collective 1011eca87e8dSBarry Smith 1012d382aafbSBarry Smith Input Parameter: 1013d382aafbSBarry Smith + memory1 - memory to free 1014d382aafbSBarry Smith . memory2 - 2nd memory to free 1015d382aafbSBarry Smith - memory3 - 3rd memory to free 1016d382aafbSBarry Smith 1017d382aafbSBarry Smith Level: developer 1018d382aafbSBarry Smith 1019d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 1020d382aafbSBarry Smith 1021d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1022d382aafbSBarry Smith 1023d382aafbSBarry Smith Concepts: memory allocation 1024d382aafbSBarry Smith 1025d382aafbSBarry Smith M*/ 1026d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1027d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1028d382aafbSBarry Smith #else 102981dabb53SJed Brown #define PetscFree3(m1,m2,m3) ((m3)=0,(m2)=0,PetscFree(m1)) 1030d382aafbSBarry Smith #endif 1031d382aafbSBarry Smith 1032d382aafbSBarry Smith /*MC 1033d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1034d382aafbSBarry Smith 1035eca87e8dSBarry Smith Synopsis: 1036eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1037eca87e8dSBarry Smith 1038eca87e8dSBarry Smith Not Collective 1039eca87e8dSBarry Smith 1040d382aafbSBarry Smith Input Parameter: 1041d382aafbSBarry Smith + m1 - memory to free 1042d382aafbSBarry Smith . m2 - 2nd memory to free 1043d382aafbSBarry Smith . m3 - 3rd memory to free 1044d382aafbSBarry Smith - m4 - 4th memory to free 1045d382aafbSBarry Smith 1046d382aafbSBarry Smith Level: developer 1047d382aafbSBarry Smith 1048d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 1049d382aafbSBarry Smith 1050d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1051d382aafbSBarry Smith 1052d382aafbSBarry Smith Concepts: memory allocation 1053d382aafbSBarry Smith 1054d382aafbSBarry Smith M*/ 1055d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1056d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1057d382aafbSBarry Smith #else 105881dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4) ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1059d382aafbSBarry Smith #endif 1060d382aafbSBarry Smith 1061d382aafbSBarry Smith /*MC 1062d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1063d382aafbSBarry Smith 1064eca87e8dSBarry Smith Synopsis: 1065eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1066eca87e8dSBarry Smith 1067eca87e8dSBarry Smith Not Collective 1068eca87e8dSBarry Smith 1069d382aafbSBarry Smith Input Parameter: 1070d382aafbSBarry Smith + m1 - memory to free 1071d382aafbSBarry Smith . m2 - 2nd memory to free 1072d382aafbSBarry Smith . m3 - 3rd memory to free 1073d382aafbSBarry Smith . m4 - 4th memory to free 1074d382aafbSBarry Smith - m5 - 5th memory to free 1075d382aafbSBarry Smith 1076d382aafbSBarry Smith Level: developer 1077d382aafbSBarry Smith 1078d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 1079d382aafbSBarry Smith 1080d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1081d382aafbSBarry Smith 1082d382aafbSBarry Smith Concepts: memory allocation 1083d382aafbSBarry Smith 1084d382aafbSBarry Smith M*/ 1085d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1086d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1087d382aafbSBarry Smith #else 108881dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1089d382aafbSBarry Smith #endif 1090d382aafbSBarry Smith 1091d382aafbSBarry Smith 1092d382aafbSBarry Smith /*MC 1093d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1094d382aafbSBarry Smith 1095eca87e8dSBarry Smith Synopsis: 1096eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1097eca87e8dSBarry Smith 1098eca87e8dSBarry Smith Not Collective 1099eca87e8dSBarry Smith 1100d382aafbSBarry Smith Input Parameter: 1101d382aafbSBarry Smith + m1 - memory to free 1102d382aafbSBarry Smith . m2 - 2nd memory to free 1103d382aafbSBarry Smith . m3 - 3rd memory to free 1104d382aafbSBarry Smith . m4 - 4th memory to free 1105d382aafbSBarry Smith . m5 - 5th memory to free 1106d382aafbSBarry Smith - m6 - 6th memory to free 1107d382aafbSBarry Smith 1108d382aafbSBarry Smith 1109d382aafbSBarry Smith Level: developer 1110d382aafbSBarry Smith 1111d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1112d382aafbSBarry Smith 1113d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1114d382aafbSBarry Smith 1115d382aafbSBarry Smith Concepts: memory allocation 1116d382aafbSBarry Smith 1117d382aafbSBarry Smith M*/ 1118d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1119d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1120d382aafbSBarry Smith #else 112181dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1122d382aafbSBarry Smith #endif 1123d382aafbSBarry Smith 1124d382aafbSBarry Smith /*MC 1125d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1126d382aafbSBarry Smith 1127eca87e8dSBarry Smith Synopsis: 1128eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1129eca87e8dSBarry Smith 1130eca87e8dSBarry Smith Not Collective 1131eca87e8dSBarry Smith 1132d382aafbSBarry Smith Input Parameter: 1133d382aafbSBarry Smith + m1 - memory to free 1134d382aafbSBarry Smith . m2 - 2nd memory to free 1135d382aafbSBarry Smith . m3 - 3rd memory to free 1136d382aafbSBarry Smith . m4 - 4th memory to free 1137d382aafbSBarry Smith . m5 - 5th memory to free 1138d382aafbSBarry Smith . m6 - 6th memory to free 1139d382aafbSBarry Smith - m7 - 7th memory to free 1140d382aafbSBarry Smith 1141d382aafbSBarry Smith 1142d382aafbSBarry Smith Level: developer 1143d382aafbSBarry Smith 1144d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1145d382aafbSBarry Smith 1146d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1147d382aafbSBarry Smith PetscMalloc7() 1148d382aafbSBarry Smith 1149d382aafbSBarry Smith Concepts: memory allocation 1150d382aafbSBarry Smith 1151d382aafbSBarry Smith M*/ 1152d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1153d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1154d382aafbSBarry Smith #else 115581dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1156d382aafbSBarry Smith #endif 1157d382aafbSBarry Smith 11588738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 11598738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 11608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 11618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocClear(void); 1162d382aafbSBarry Smith 1163d382aafbSBarry Smith /* 1164*66d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1165d382aafbSBarry Smith */ 11668738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDump(FILE *); 11678738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDumpLog(FILE *); 11688738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocGetCurrentUsage(PetscLogDouble *); 11698738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocGetMaximumUsage(PetscLogDouble *); 1170ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDebug(PetscBool); 11718738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocValidate(int,const char[],const char[],const char[]); 11728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocSetDumpLog(void); 1173d382aafbSBarry Smith 1174d382aafbSBarry Smith 1175d382aafbSBarry Smith /* 1176d382aafbSBarry Smith Variable type where we stash PETSc object pointers in Fortran. 1177*66d669d6SBarry Smith On most machines size(pointer) == sizeof(long) - except Microsoft Windows where its sizeof(long long). 1178*66d669d6SBarry Smith Note we could just use size_t here, but then PETSC_VIEWER_*_*_FORTRAN would need to be given as positive numbers. 1179d382aafbSBarry Smith */ 1180d382aafbSBarry Smith 1181d382aafbSBarry Smith #if (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG) 1182d382aafbSBarry Smith #define PetscFortranAddr long 1183d382aafbSBarry Smith #elif (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG_LONG) 1184d382aafbSBarry Smith #define PetscFortranAddr long long 1185d382aafbSBarry Smith #else 1186d382aafbSBarry Smith #error "Unknown size for PetscFortranAddr! Send us a bugreport at petsc-maint@mcs.anl.gov" 1187d382aafbSBarry Smith #endif 1188d382aafbSBarry Smith 1189d382aafbSBarry Smith /*E 1190d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1191d382aafbSBarry Smith 1192d382aafbSBarry Smith Level: beginner 1193d382aafbSBarry Smith 1194d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1195d382aafbSBarry Smith 1196d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1197d382aafbSBarry Smith PetscDataTypeGetSize() 1198d382aafbSBarry Smith 1199d382aafbSBarry Smith E*/ 1200d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 1201ace3abfcSBarry Smith PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC_LONG_DOUBLE = 10, PETSC_QD_DD = 11} PetscDataType; 1202d382aafbSBarry Smith extern const char *PetscDataTypes[]; 1203d382aafbSBarry Smith 1204d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1205d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1206d382aafbSBarry Smith #else 1207d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1208d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 1209d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1210d382aafbSBarry Smith #define PETSC_SCALAR PETSC_LONG_DOUBLE 1211d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1212d382aafbSBarry Smith #define PETSC_SCALAR PETSC_INT 1213d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1214d382aafbSBarry Smith #define PETSC_SCALAR PETSC_QD_DD 1215d382aafbSBarry Smith #else 1216d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1217d382aafbSBarry Smith #endif 1218d382aafbSBarry Smith #endif 1219d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1220d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 1221d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1222d382aafbSBarry Smith #define PETSC_REAL PETSC_LONG_DOUBLE 1223d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1224d382aafbSBarry Smith #define PETSC_REAL PETSC_INT 1225d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1226d382aafbSBarry Smith #define PETSC_REAL PETSC_QD_DD 1227d382aafbSBarry Smith #else 1228d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1229d382aafbSBarry Smith #endif 1230d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1231d382aafbSBarry Smith 12328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 12338738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 12348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDataTypeGetSize(PetscDataType,size_t*); 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith /* 1237d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1238d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1239d382aafbSBarry Smith functionality and/or error checking. 1240d382aafbSBarry Smith */ 12418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 12428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemmove(void*,void *,size_t); 1243ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemcmp(const void*,const void*,size_t,PetscBool *); 12448738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrlen(const char[],size_t*); 12458738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrToArray(const char[],int*,char ***); 12468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrToArrayDestroy(int,char **); 1247ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcmp(const char[],const char[],PetscBool *); 1248ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrgrt(const char[],const char[],PetscBool *); 1249ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcasecmp(const char[],const char[],PetscBool *); 1250ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncmp(const char[],const char[],size_t,PetscBool *); 12518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcpy(char[],const char[]); 12528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcat(char[],const char[]); 12538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncat(char[],const char[],size_t); 12548738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncpy(char[],const char[],size_t); 12558738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrchr(const char[],char,char *[]); 12568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrtolower(char[]); 12578738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrrchr(const char[],char,char *[]); 12588738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrstr(const char[],const char[],char *[]); 12598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrrstr(const char[],const char[],char *[]); 12608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrallocpy(const char[],char *[]); 12618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1262d382aafbSBarry Smith 1263d382aafbSBarry Smith /*S 1264d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1265d382aafbSBarry Smith 1266d382aafbSBarry Smith Level: intermediate 1267d382aafbSBarry Smith 1268d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1269d382aafbSBarry Smith S*/ 1270d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1271d382aafbSBarry Smith 12728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenCreate(const char[],const char,PetscToken*); 12738738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenFind(PetscToken,char *[]); 12748738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenDestroy(PetscToken); 1275d382aafbSBarry Smith 1276d382aafbSBarry Smith /* 1277d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1278d382aafbSBarry Smith */ 12798738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT MPI_Op PetscMaxSum_Op; 1280d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX) 12818738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT MPI_Op MPIU_SUM; 1282d382aafbSBarry Smith #else 1283d382aafbSBarry Smith #define MPIU_SUM MPI_SUM 1284d382aafbSBarry Smith #endif 12858738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1286d382aafbSBarry Smith 1287d382aafbSBarry Smith /*S 1288d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1289d382aafbSBarry Smith 1290d382aafbSBarry Smith Level: beginner 1291d382aafbSBarry Smith 1292d382aafbSBarry Smith Note: This is the base class from which all objects appear. 1293d382aafbSBarry Smith 12941890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1295d382aafbSBarry Smith S*/ 1296d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1297d382aafbSBarry Smith 1298d382aafbSBarry Smith /*S 1299d382aafbSBarry Smith PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1300d382aafbSBarry Smith by string name 1301d382aafbSBarry Smith 1302d382aafbSBarry Smith Level: advanced 1303d382aafbSBarry Smith 1304d382aafbSBarry Smith .seealso: PetscFListAdd(), PetscFListDestroy() 1305d382aafbSBarry Smith S*/ 1306d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList; 1307d382aafbSBarry Smith 1308d382aafbSBarry Smith /*E 1309d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1310d382aafbSBarry Smith 1311d382aafbSBarry Smith Level: beginner 1312d382aafbSBarry Smith 1313d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1314d382aafbSBarry Smith 1315d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1316d382aafbSBarry Smith 1317d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1318d382aafbSBarry Smith 1319d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1320d382aafbSBarry Smith 1321d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1322d382aafbSBarry Smith 1323d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1324d382aafbSBarry Smith E*/ 1325d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1326d382aafbSBarry Smith 1327d382aafbSBarry Smith #include "petscviewer.h" 1328d382aafbSBarry Smith #include "petscoptions.h" 1329d382aafbSBarry Smith 13300700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 13318738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_LARGEST_CLASSID; 13328738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_OBJECT_CLASSID; 13338738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscClassIdRegister(const char[],PetscClassId *); 1334d382aafbSBarry Smith 1335d382aafbSBarry Smith /* 1336d382aafbSBarry Smith Routines that get memory usage information from the OS 1337d382aafbSBarry Smith */ 13388738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryGetCurrentUsage(PetscLogDouble *); 13398738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryGetMaximumUsage(PetscLogDouble *); 13408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemorySetGetMaximumUsage(void); 13418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryShowUsage(PetscViewer,const char[]); 1342d382aafbSBarry Smith 1343ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInfoAllow(PetscBool ,const char []); 13448738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetTime(PetscLogDouble*); 13458738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetCPUTime(PetscLogDouble*); 13468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSleep(PetscReal); 1347d382aafbSBarry Smith 1348d382aafbSBarry Smith /* 1349d382aafbSBarry Smith Initialization of PETSc 1350d382aafbSBarry Smith */ 13518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitialize(int*,char***,const char[],const char[]); 1352d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL)) 13538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitializeNoArguments(void); 1354ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitialized(PetscBool *); 1355ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFinalized(PetscBool *); 13568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFinalize(void); 1357d382aafbSBarry Smith EXTERN PetscErrorCode PetscInitializeFortran(void); 13588738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArgs(int*,char ***); 13598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArguments(char ***); 13608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFreeArguments(char **); 1361d382aafbSBarry Smith 13628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscEnd(void); 13638738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSysInitializePackage(const char[]); 1364d382aafbSBarry Smith 1365d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD; 13668738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 13678738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPSpawn(PetscMPIInt); 13688738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPFinalize(void); 13698738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 13708738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 13718738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPFree(MPI_Comm,void*); 13728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPMalloc(MPI_Comm,size_t,void**); 1373d382aafbSBarry Smith 13748738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonInitialize(const char[],const char[]); 13758738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonFinalize(void); 1376e0ab9aedSLisandro Dalcin EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonPrintError(void); 1377d382aafbSBarry Smith 1378d382aafbSBarry Smith /* 1379d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 1380d382aafbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be 1381d382aafbSBarry Smith C++. 1382d382aafbSBarry Smith */ 1383d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void); 1384d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void); 1385d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1386d382aafbSBarry Smith 1387d382aafbSBarry Smith /* 1388d382aafbSBarry Smith PetscTryMethod - Queries an object for a method, if it exists then calls it. 1389d382aafbSBarry Smith These are intended to be used only inside PETSc functions. 1390503cfb0cSBarry Smith 1391503cfb0cSBarry Smith Level: developer 1392503cfb0cSBarry Smith 1393503cfb0cSBarry Smith .seealso: PetscUseMethod() 1394d382aafbSBarry Smith */ 1395d382aafbSBarry Smith #define PetscTryMethod(obj,A,B,C) \ 1396d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1397d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1398d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1399d382aafbSBarry Smith } 1400503cfb0cSBarry Smith 1401503cfb0cSBarry Smith /* 1402503cfb0cSBarry Smith PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error. 1403503cfb0cSBarry Smith These are intended to be used only inside PETSc functions. 1404503cfb0cSBarry Smith 1405503cfb0cSBarry Smith Level: developer 1406503cfb0cSBarry Smith 1407503cfb0cSBarry Smith .seealso: PetscTryMethod() 1408503cfb0cSBarry Smith */ 1409d382aafbSBarry Smith #define PetscUseMethod(obj,A,B,C) \ 1410d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1411d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1412d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1413703c66c1SJed Brown else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \ 1414d382aafbSBarry Smith } 1415503cfb0cSBarry Smith 1416d382aafbSBarry Smith /* 1417d382aafbSBarry Smith Functions that can act on any PETSc object. 1418d382aafbSBarry Smith */ 14198738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCreate(MPI_Comm,PetscObject*); 14208738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCreateGeneric(MPI_Comm, PetscClassId, const char [], PetscObject *); 14218738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDestroy(PetscObject); 14228738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetComm(PetscObject,MPI_Comm *); 14238738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetClassId(PetscObject,PetscClassId *); 14248738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetType(PetscObject,const char []); 1425e4974155SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetPrecision(PetscObject,PetscPrecision); 14268738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetType(PetscObject,const char *[]); 14278738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetName(PetscObject,const char[]); 14288738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetName(PetscObject,const char*[]); 1429317d6ea6SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]); 14308738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetTabLevel(PetscObject,PetscInt); 14318738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetTabLevel(PetscObject,PetscInt*); 14328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 14338738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectReference(PetscObject); 14348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetReference(PetscObject,PetscInt*); 14358738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDereference(PetscObject); 14368738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 14378738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectView(PetscObject,PetscViewer); 14388738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCompose(PetscObject,const char[],PetscObject); 14398738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectQuery(PetscObject,const char[],PetscObject *); 14408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 14418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetFromOptions(PetscObject); 14428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetUp(PetscObject); 14438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 14448738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*); 14458738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectProcessOptionsHandlers(PetscObject); 14468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDestroyOptionsHandlers(PetscObject); 1447d382aafbSBarry Smith 1448d382aafbSBarry Smith /*MC 1449d382aafbSBarry Smith PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1450d382aafbSBarry Smith 1451eca87e8dSBarry Smith Synopsis: 1452eca87e8dSBarry Smith PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1453eca87e8dSBarry Smith 1454ad4df100SBarry Smith Logically Collective on PetscObject 1455d382aafbSBarry Smith 1456d382aafbSBarry Smith Input Parameters: 1457d382aafbSBarry Smith + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1458d382aafbSBarry Smith PetscObjectCompose((PetscObject)mat,...); 1459d382aafbSBarry Smith . name - name associated with the child function 1460d382aafbSBarry Smith . fname - name of the function 1461d382aafbSBarry Smith - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1462d382aafbSBarry Smith 1463d382aafbSBarry Smith Level: advanced 1464d382aafbSBarry Smith 1465d382aafbSBarry Smith 1466d382aafbSBarry Smith Notes: 1467d382aafbSBarry Smith To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1468d382aafbSBarry Smith 1469d382aafbSBarry Smith PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1470d382aafbSBarry Smith Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1471d382aafbSBarry Smith 1472d382aafbSBarry Smith The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 147320de1f94SBarry Smith work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading) 1474d382aafbSBarry Smith enabled. 1475d382aafbSBarry Smith 1476d382aafbSBarry Smith Concepts: objects^composing functions 1477d382aafbSBarry Smith Concepts: composing functions 1478d382aafbSBarry Smith Concepts: functions^querying 1479d382aafbSBarry Smith Concepts: objects^querying 1480d382aafbSBarry Smith Concepts: querying objects 1481d382aafbSBarry Smith 1482d382aafbSBarry Smith .seealso: PetscObjectQueryFunction() 1483d382aafbSBarry Smith M*/ 1484d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1485d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1486d382aafbSBarry Smith #else 1487d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1488d382aafbSBarry Smith #endif 1489d382aafbSBarry Smith 14908738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 14918738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetOptionsPrefix(PetscObject,const char[]); 14928738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 14938738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 14948738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 14959fb22e1aSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAMSPublish(PetscObject); 1496c457296dSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectUnPublish(PetscObject); 14978738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectChangeTypeName(PetscObject,const char[]); 14988738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectRegisterDestroy(PetscObject); 14998738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectRegisterDestroyAll(void); 15008738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectName(PetscObject); 1501ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTypeCompare(PetscObject,const char[],PetscBool *); 15028738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRegisterFinalize(PetscErrorCode (*)(void)); 15038738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRegisterFinalizeAll(void); 1504d382aafbSBarry Smith 1505d382aafbSBarry Smith /* 1506d382aafbSBarry Smith Defines PETSc error handling. 1507d382aafbSBarry Smith */ 1508d382aafbSBarry Smith #include "petscerror.h" 1509d382aafbSBarry Smith 1510d382aafbSBarry Smith /*S 1511503cfb0cSBarry Smith PetscOList - Linked list of PETSc objects, each accessable by string name 1512d382aafbSBarry Smith 15131d0fab5eSBarry Smith Level: developer 1514d382aafbSBarry Smith 15151d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 15161d0fab5eSBarry Smith 15171d0fab5eSBarry Smith .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery() 1518d382aafbSBarry Smith S*/ 1519d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList; 1520d382aafbSBarry Smith 15218738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListDestroy(PetscOList); 15228738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListFind(PetscOList,const char[],PetscObject*); 15238738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListReverseFind(PetscOList,PetscObject,char**); 15248738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListAdd(PetscOList *,const char[],PetscObject); 15258738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListDuplicate(PetscOList,PetscOList *); 1526d382aafbSBarry Smith 1527d382aafbSBarry Smith /* 1528503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1529d382aafbSBarry Smith link libraries that will be loaded as needed. 1530d382aafbSBarry Smith */ 15318738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 15328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListDestroy(PetscFList*); 15338738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListFind(PetscFList,MPI_Comm,const char[],void (**)(void)); 15348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1535d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1536d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1537d382aafbSBarry Smith #else 1538d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1539d382aafbSBarry Smith #endif 15408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListDuplicate(PetscFList,PetscFList *); 15418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListView(PetscFList,PetscViewer); 15428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListConcat(const char [],const char [],char []); 15438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListGet(PetscFList,char ***,int*); 1544d382aafbSBarry Smith 1545d382aafbSBarry Smith /*S 1546d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1547d382aafbSBarry Smith 1548d382aafbSBarry Smith Level: advanced 1549d382aafbSBarry Smith 155020de1f94SBarry Smith --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries 1551d382aafbSBarry Smith 1552d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1553d382aafbSBarry Smith S*/ 1554d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 15558738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscDLLibrary DLLibrariesLoaded; 15568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 15578738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 15588738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 15598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryPrintPath(PetscDLLibrary); 1560ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 15618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 15628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryClose(PetscDLLibrary); 15638738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1564d382aafbSBarry Smith 1565d382aafbSBarry Smith /* 156605846914SDmitry Karpeev PetscFwk support. Needs to be documented. 156705846914SDmitry Karpeev Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc. 156805846914SDmitry Karpeev */ 156905846914SDmitry Karpeev #include "petscfwk.h" 157005846914SDmitry Karpeev 157105846914SDmitry Karpeev /* 1572d382aafbSBarry Smith Useful utility routines 1573d382aafbSBarry Smith */ 15748738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 15758738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 15768738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1577d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1)) 1578d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1)) 15798738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1580d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1)) 1581d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1)) 15828738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBarrier(PetscObject); 15838738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMPIDump(FILE*); 1584d382aafbSBarry Smith 1585503cfb0cSBarry Smith /* 1586ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1587503cfb0cSBarry Smith 1588503cfb0cSBarry Smith Notes: This is useful in cases like 1589503cfb0cSBarry Smith $ int *a; 1590ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 1591ace3abfcSBarry Smith where !a does not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1592503cfb0cSBarry Smith */ 1593d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1594503cfb0cSBarry Smith 1595d382aafbSBarry Smith /* 1596d382aafbSBarry Smith Defines basic graphics available from PETSc. 1597d382aafbSBarry Smith */ 1598d382aafbSBarry Smith #include "petscdraw.h" 1599d382aafbSBarry Smith 1600d382aafbSBarry Smith /* 1601d382aafbSBarry Smith Defines the base data structures for all PETSc objects 1602d382aafbSBarry Smith */ 1603d382aafbSBarry Smith #include "private/petscimpl.h" 1604503cfb0cSBarry Smith 1605d382aafbSBarry Smith /* 1606d382aafbSBarry Smith Defines PETSc profiling. 1607d382aafbSBarry Smith */ 1608d382aafbSBarry Smith #include "petsclog.h" 1609d382aafbSBarry Smith 1610d382aafbSBarry Smith /* 1611b3506946SBarry Smith For locking, unlocking and destroying AMS memories associated with PETSc objects. ams.h is included in petscviewer.h 1612d382aafbSBarry Smith */ 1613b3506946SBarry Smith #if defined(PETSC_HAVE_AMS) 1614ace3abfcSBarry Smith extern PetscBool PetscAMSPublishAll; 1615b3506946SBarry Smith #define PetscObjectTakeAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem)) 1616b3506946SBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem)) 1617b3506946SBarry Smith #define PetscObjectDepublish(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1; 1618b3506946SBarry Smith #else 1619d382aafbSBarry Smith #define PetscObjectTakeAccess(obj) 0 1620d382aafbSBarry Smith #define PetscObjectGrantAccess(obj) 0 1621d382aafbSBarry Smith #define PetscObjectDepublish(obj) 0 1622b3506946SBarry Smith #endif 1623d382aafbSBarry Smith 1624d382aafbSBarry Smith /* 1625d382aafbSBarry Smith Simple PETSc parallel IO for ASCII printing 1626d382aafbSBarry Smith */ 16278738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFixFilename(const char[],char[]); 16288738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 16298738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFClose(MPI_Comm,FILE*); 1630*66d669d6SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1631*66d669d6SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPrintf(MPI_Comm,const char[],...); 16328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSNPrintf(char*,size_t,const char [],...); 1633d382aafbSBarry Smith 1634238ccf28SShri Abhyankar 1635238ccf28SShri Abhyankar 1636d382aafbSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1637d382aafbSBarry Smith #include <stdarg.h> 1638c9a19010SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 16398738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT (*PetscVFPrintf)(FILE*,const char[],va_list); 16408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscVFPrintfDefault(FILE*,const char[],va_list); 1641d382aafbSBarry Smith 1642238ccf28SShri Abhyankar #if defined(PETSC_HAVE_MATLAB_ENGINE) 1643238ccf28SShri Abhyankar EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscVFPrintf_Matlab(FILE*,const char[],va_list); 1644238ccf28SShri Abhyankar #endif 1645238ccf28SShri Abhyankar 1646d382aafbSBarry Smith /*MC 1647d382aafbSBarry Smith PetscErrorPrintf - Prints error messages. 1648d382aafbSBarry Smith 1649d382aafbSBarry Smith Synopsis: 1650d382aafbSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1651d382aafbSBarry Smith 1652eca87e8dSBarry Smith Not Collective 1653eca87e8dSBarry Smith 1654d382aafbSBarry Smith Input Parameters: 1655d382aafbSBarry Smith . format - the usual printf() format string 1656d382aafbSBarry Smith 1657d382aafbSBarry Smith Options Database Keys: 1658d382aafbSBarry Smith + -error_output_stdout - cause error messages to be printed to stdout instead of the 1659d382aafbSBarry Smith (default) stderr 1660d382aafbSBarry Smith - -error_output_none to turn off all printing of error messages (does not change the way the 1661d382aafbSBarry Smith error is handled.) 1662d382aafbSBarry Smith 1663d382aafbSBarry Smith Notes: Use 1664d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1665d382aafbSBarry Smith $ error is handled.) and 1666d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1667c9a19010SBarry Smith $ of you can use your own function 1668d382aafbSBarry Smith 1669d382aafbSBarry Smith Use 1670d382aafbSBarry Smith PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1671d382aafbSBarry Smith PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1672d382aafbSBarry Smith 1673d382aafbSBarry Smith Use 1674d382aafbSBarry Smith PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1675d382aafbSBarry Smith 1676d382aafbSBarry Smith Level: developer 1677d382aafbSBarry Smith 1678d382aafbSBarry Smith Fortran Note: 1679d382aafbSBarry Smith This routine is not supported in Fortran. 1680d382aafbSBarry Smith 1681d382aafbSBarry Smith Concepts: error messages^printing 1682d382aafbSBarry Smith Concepts: printing^error messages 1683d382aafbSBarry Smith 1684c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf() 1685d382aafbSBarry Smith M*/ 16868738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1687d382aafbSBarry Smith 1688d382aafbSBarry Smith /*MC 1689d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1690d382aafbSBarry Smith 1691d382aafbSBarry Smith Synopsis: 1692d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1693d382aafbSBarry Smith 1694eca87e8dSBarry Smith Not Collective 1695eca87e8dSBarry Smith 1696d382aafbSBarry Smith Input Parameters: 1697d382aafbSBarry Smith . format - the usual printf() format string 1698d382aafbSBarry Smith 1699d382aafbSBarry Smith Level: developer 1700d382aafbSBarry Smith 1701d382aafbSBarry Smith Fortran Note: 1702d382aafbSBarry Smith This routine is not supported in Fortran. 1703d382aafbSBarry Smith 1704d382aafbSBarry Smith Concepts: help messages^printing 1705d382aafbSBarry Smith Concepts: printing^help messages 1706d382aafbSBarry Smith 1707d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1708d382aafbSBarry Smith M*/ 17098738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1710d382aafbSBarry Smith 1711d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1712d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1713d382aafbSBarry Smith EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1714d382aafbSBarry Smith 1715d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 17168738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 17178738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPClose(MPI_Comm,FILE*); 1718d382aafbSBarry Smith #endif 1719d382aafbSBarry Smith 1720*66d669d6SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1721*66d669d6SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 17228738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFlush(MPI_Comm); 17238738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 17248738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 17258738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 17268738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetPetscDir(const char*[]); 1727d382aafbSBarry Smith 17288738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1729d382aafbSBarry Smith 1730d382aafbSBarry Smith /*S 1731d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1732d382aafbSBarry Smith 1733d382aafbSBarry Smith Level: advanced 1734d382aafbSBarry Smith 1735d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1736d382aafbSBarry Smith S*/ 17378738c821SJed Brown extern PetscClassId PETSCSYS_DLLEXPORT PETSC_CONTAINER_CLASSID; 1738d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 17398738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerGetPointer(PetscContainer,void **); 17408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerSetPointer(PetscContainer,void *); 17418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerDestroy(PetscContainer); 17428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerCreate(MPI_Comm,PetscContainer *); 17438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1744d382aafbSBarry Smith 1745d382aafbSBarry Smith /* 1746d382aafbSBarry Smith For use in debuggers 1747d382aafbSBarry Smith */ 17488738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscMPIInt PetscGlobalRank; 17498738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscMPIInt PetscGlobalSize; 17508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscIntView(PetscInt,const PetscInt[],PetscViewer); 17518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRealView(PetscInt,const PetscReal[],PetscViewer); 17528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1753d382aafbSBarry Smith 1754d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H) 1755d382aafbSBarry Smith #include <memory.h> 1756d382aafbSBarry Smith #endif 1757d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1758d382aafbSBarry Smith #include <stdlib.h> 1759d382aafbSBarry Smith #endif 1760d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H) 1761d382aafbSBarry Smith #include <strings.h> 1762d382aafbSBarry Smith #endif 1763d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H) 1764d382aafbSBarry Smith #include <string.h> 1765d382aafbSBarry Smith #endif 17666c7e564aSBarry Smith 17676c7e564aSBarry Smith 1768d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H) 1769d382aafbSBarry Smith #include <xmmintrin.h> 1770d382aafbSBarry Smith #endif 1771d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H) 1772d382aafbSBarry Smith #include <stdint.h> 1773d382aafbSBarry Smith #endif 1774d382aafbSBarry Smith 1775d382aafbSBarry Smith /*@C 1776d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1777d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1778d382aafbSBarry Smith PetscMemmove() in that case. 1779d382aafbSBarry Smith 1780d382aafbSBarry Smith Not Collective 1781d382aafbSBarry Smith 1782d382aafbSBarry Smith Input Parameters: 1783d382aafbSBarry Smith + b - pointer to initial memory space 1784d382aafbSBarry Smith - n - length (in bytes) of space to copy 1785d382aafbSBarry Smith 1786d382aafbSBarry Smith Output Parameter: 1787d382aafbSBarry Smith . a - pointer to copy space 1788d382aafbSBarry Smith 1789d382aafbSBarry Smith Level: intermediate 1790d382aafbSBarry Smith 1791d382aafbSBarry Smith Compile Option: 1792d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1793d382aafbSBarry Smith for memory copies on double precision values. 1794d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1795d382aafbSBarry Smith for memory copies on double precision values. 1796d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1797d382aafbSBarry Smith for memory copies on double precision values. 1798d382aafbSBarry Smith 1799d382aafbSBarry Smith Note: 1800d382aafbSBarry Smith This routine is analogous to memcpy(). 1801d382aafbSBarry Smith 1802503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1803503cfb0cSBarry Smith 1804d382aafbSBarry Smith Concepts: memory^copying 1805d382aafbSBarry Smith Concepts: copying^memory 1806d382aafbSBarry Smith 1807d382aafbSBarry Smith .seealso: PetscMemmove() 1808d382aafbSBarry Smith 1809d382aafbSBarry Smith @*/ 18108738c821SJed Brown PETSC_STATIC_INLINE PetscErrorCode PETSCSYS_DLLEXPORT PetscMemcpy(void *a,const void *b,size_t n) 1811d382aafbSBarry Smith { 1812d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1813d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1814d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1815e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1816e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1817d382aafbSBarry Smith #endif 1818d382aafbSBarry Smith PetscFunctionBegin; 1819d382aafbSBarry Smith if (a != b) { 1820d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1821d382aafbSBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) { 1822e32f2f54SBarry Smith SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1823d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1824d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1825d382aafbSBarry Smith } 1826d382aafbSBarry Smith #endif 1827d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1828d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1829d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1830d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1831d382aafbSBarry Smith PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1832d382aafbSBarry Smith BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1833d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1834d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1835d382aafbSBarry Smith #else 1836d382aafbSBarry Smith size_t i; 1837d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1838d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1839d382aafbSBarry Smith #endif 1840d382aafbSBarry Smith } else { 1841d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1842d382aafbSBarry Smith } 1843d382aafbSBarry Smith #elif defined(PETSC_HAVE__INTEL_FAST_MEMCPY) 1844d382aafbSBarry Smith _intel_fast_memcpy((char*)(a),(char*)(b),n); 1845d382aafbSBarry Smith #else 1846d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1847d382aafbSBarry Smith #endif 1848d382aafbSBarry Smith } 1849d382aafbSBarry Smith PetscFunctionReturn(0); 1850d382aafbSBarry Smith } 1851d382aafbSBarry Smith 1852d382aafbSBarry Smith /*@C 1853d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1854d382aafbSBarry Smith 1855d382aafbSBarry Smith Not Collective 1856d382aafbSBarry Smith 1857d382aafbSBarry Smith Input Parameters: 1858d382aafbSBarry Smith + a - pointer to beginning memory location 1859d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1860d382aafbSBarry Smith 1861d382aafbSBarry Smith Level: intermediate 1862d382aafbSBarry Smith 1863d382aafbSBarry Smith Compile Option: 1864d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1865d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1866d382aafbSBarry Smith 1867503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1868503cfb0cSBarry Smith 1869d382aafbSBarry Smith Concepts: memory^zeroing 1870d382aafbSBarry Smith Concepts: zeroing^memory 1871d382aafbSBarry Smith 1872d382aafbSBarry Smith .seealso: PetscMemcpy() 1873d382aafbSBarry Smith @*/ 18748738c821SJed Brown PETSC_STATIC_INLINE PetscErrorCode PETSCSYS_DLLEXPORT PetscMemzero(void *a,size_t n) 1875d382aafbSBarry Smith { 1876d382aafbSBarry Smith if (n > 0) { 1877d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1878e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1879d382aafbSBarry Smith #endif 1880d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1881d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1882d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1883d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1884d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1885d382aafbSBarry Smith } else { 1886d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1887d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1888d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1889d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1890d382aafbSBarry Smith } else { 1891d382aafbSBarry Smith #endif 1892d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1893d382aafbSBarry Smith bzero((char *)a,n); 1894d382aafbSBarry Smith #elif defined (PETSC_HAVE__INTEL_FAST_MEMSET) 1895d382aafbSBarry Smith _intel_fast_memset((char*)a,0,n); 1896d382aafbSBarry Smith #else 1897d382aafbSBarry Smith memset((char*)a,0,n); 1898d382aafbSBarry Smith #endif 1899d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1900d382aafbSBarry Smith } 1901d382aafbSBarry Smith #endif 1902d382aafbSBarry Smith } 1903d382aafbSBarry Smith return 0; 1904d382aafbSBarry Smith } 1905d382aafbSBarry Smith 1906d382aafbSBarry Smith /*MC 1907d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1908d382aafbSBarry Smith 1909eca87e8dSBarry Smith Synopsis: 1910eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1911eca87e8dSBarry Smith 1912d382aafbSBarry Smith Not Collective 1913d382aafbSBarry Smith 1914d382aafbSBarry Smith Input Parameters: 1915d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1916d382aafbSBarry Smith . n - number of elements to fetch 1917d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 191850d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1919d382aafbSBarry Smith 1920d382aafbSBarry Smith Level: developer 1921d382aafbSBarry Smith 1922d382aafbSBarry Smith Notes: 1923d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1924d382aafbSBarry Smith 192550d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 192650d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 192750d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 192863cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 192963cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 193063cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1931d382aafbSBarry Smith 1932d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1933d382aafbSBarry Smith address). 1934d382aafbSBarry Smith 1935d382aafbSBarry Smith Concepts: memory 1936d382aafbSBarry Smith M*/ 1937d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1938d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1939d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1940d382aafbSBarry Smith } while (0) 1941d382aafbSBarry Smith 1942d382aafbSBarry Smith /* 1943d382aafbSBarry Smith Allows accessing Matlab Engine 1944d382aafbSBarry Smith */ 1945d382aafbSBarry Smith #include "petscmatlab.h" 1946d382aafbSBarry Smith 1947d382aafbSBarry Smith /* 1948d382aafbSBarry Smith Determine if some of the kernel computation routines use 1949d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1950d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1951d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1952e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1953d382aafbSBarry Smith */ 1954d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1955d382aafbSBarry Smith 1956d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1957d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1958d382aafbSBarry Smith #endif 1959d382aafbSBarry Smith 19605a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19615a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1962d382aafbSBarry Smith #endif 1963d382aafbSBarry Smith 1964d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1965d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1966d382aafbSBarry Smith #endif 1967d382aafbSBarry Smith 1968d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1969d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1970d382aafbSBarry Smith #endif 1971d382aafbSBarry Smith 1972d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1973d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1974d382aafbSBarry Smith #endif 1975d382aafbSBarry Smith 1976d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1977d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1978d382aafbSBarry Smith #endif 1979d382aafbSBarry Smith 1980d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1981d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1982d382aafbSBarry Smith #endif 1983d382aafbSBarry Smith 1984d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1985d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1986d382aafbSBarry Smith #endif 1987d382aafbSBarry Smith 1988d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1989d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1990d382aafbSBarry Smith #endif 1991d382aafbSBarry Smith 1992d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1993d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1994d382aafbSBarry Smith #endif 1995d382aafbSBarry Smith 1996d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1997d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1998d382aafbSBarry Smith #endif 1999d382aafbSBarry Smith 2000d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2001d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2002d382aafbSBarry Smith #endif 2003d382aafbSBarry Smith 2004d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2005d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2006d382aafbSBarry Smith #endif 2007d382aafbSBarry Smith 2008d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2009d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2010d382aafbSBarry Smith #endif 2011d382aafbSBarry Smith 2012d382aafbSBarry Smith #endif 2013d382aafbSBarry Smith 2014d382aafbSBarry Smith /* 2015d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2016d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2017d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2018d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2019d382aafbSBarry Smith ugly extern "C" {} wrappers. 2020d382aafbSBarry Smith */ 2021d382aafbSBarry Smith #if defined(__cplusplus) 2022d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 2023d382aafbSBarry Smith #define EXTERN_C_END } 2024d382aafbSBarry Smith #else 2025d382aafbSBarry Smith #define EXTERN_C_BEGIN 2026d382aafbSBarry Smith #define EXTERN_C_END 2027d382aafbSBarry Smith #endif 2028d382aafbSBarry Smith 2029d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2030d382aafbSBarry Smith 2031d382aafbSBarry Smith /*MC 2032d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2033d382aafbSBarry Smith communication 2034d382aafbSBarry Smith 2035d382aafbSBarry Smith Level: beginner 2036d382aafbSBarry Smith 2037d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2038d382aafbSBarry Smith 2039d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2040d382aafbSBarry Smith M*/ 2041d382aafbSBarry Smith 2042d382aafbSBarry Smith /*MC 2043d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 2044d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 2045d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 2046d382aafbSBarry Smith 2047d382aafbSBarry Smith 2048d382aafbSBarry Smith Level: beginner 2049d382aafbSBarry Smith 2050d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 2051d382aafbSBarry Smith M*/ 2052d382aafbSBarry Smith 2053d382aafbSBarry Smith /*MC 2054d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 2055d382aafbSBarry Smith 2056d382aafbSBarry Smith Level: beginner 2057d382aafbSBarry Smith 2058d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 2059d382aafbSBarry Smith M*/ 2060d382aafbSBarry Smith 2061d382aafbSBarry Smith /*MC 2062d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 2063d382aafbSBarry Smith Level: beginner 2064d382aafbSBarry Smith 2065d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 2066d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 2069d382aafbSBarry Smith M*/ 2070d382aafbSBarry Smith 2071d382aafbSBarry Smith /*MC 2072d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 2073d382aafbSBarry Smith 2074d382aafbSBarry Smith Level: beginner 2075d382aafbSBarry Smith 2076d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 2077d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2078d382aafbSBarry Smith 2079d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2080d382aafbSBarry Smith M*/ 2081d382aafbSBarry Smith 2082d382aafbSBarry Smith /*MC 2083d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2084d382aafbSBarry Smith 2085d382aafbSBarry Smith Level: beginner 2086d382aafbSBarry Smith 2087d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2088d382aafbSBarry Smith pass this value 2089d382aafbSBarry Smith 2090d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2091d382aafbSBarry Smith M*/ 2092d382aafbSBarry Smith 2093d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2094d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2095d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2096d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2097d382aafbSBarry Smith #else 2098d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2099d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2100d382aafbSBarry Smith #endif 2101d382aafbSBarry Smith #endif 2102d382aafbSBarry Smith 2103d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2104d382aafbSBarry Smith 2105d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2106d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2107d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2108d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2109d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2110d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2111d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2112d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX 2147483647 2113d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647 2114d382aafbSBarry Smith 2115d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2116e32f2f54SBarry Smith #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2117e32f2f54SBarry Smith #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2118d382aafbSBarry Smith #define PetscMPIIntCast(a) (a);PetscMPIIntCheck(a) 2119d382aafbSBarry Smith #define PetscBLASIntCast(a) (a);PetscBLASIntCheck(a) 2120d382aafbSBarry Smith 2121d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4) 2122e32f2f54SBarry Smith #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2123d382aafbSBarry Smith #define PetscHDF5IntCast(a) (a);PetscHDF5IntCheck(a) 2124d382aafbSBarry Smith #else 2125d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2126d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2127d382aafbSBarry Smith #endif 2128d382aafbSBarry Smith 2129d382aafbSBarry Smith #else 2130d382aafbSBarry Smith #define PetscMPIIntCheck(a) 2131d382aafbSBarry Smith #define PetscBLASIntCheck(a) 2132d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2133d382aafbSBarry Smith #define PetscMPIIntCast(a) a 2134d382aafbSBarry Smith #define PetscBLASIntCast(a) a 2135d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2136d382aafbSBarry Smith #endif 2137d382aafbSBarry Smith 2138d382aafbSBarry Smith 2139d382aafbSBarry Smith /* 2140d382aafbSBarry Smith The IBM include files define hz, here we hide it so that it may be used 2141d382aafbSBarry Smith as a regular user variable. 2142d382aafbSBarry Smith */ 2143d382aafbSBarry Smith #if defined(hz) 2144d382aafbSBarry Smith #undef hz 2145d382aafbSBarry Smith #endif 2146d382aafbSBarry Smith 2147d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2148d382aafbSBarry Smith 2149d382aafbSBarry Smith 2150d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2151d382aafbSBarry Smith #include <limits.h> 2152d382aafbSBarry Smith #endif 2153d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2154d382aafbSBarry Smith #include <sys/param.h> 2155d382aafbSBarry Smith #endif 2156d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2157d382aafbSBarry Smith #include <sys/types.h> 2158d382aafbSBarry Smith #endif 2159d382aafbSBarry Smith #if defined(MAXPATHLEN) 2160d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2161d382aafbSBarry Smith #elif defined(MAX_PATH) 2162d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2163d382aafbSBarry Smith #elif defined(_MAX_PATH) 2164d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2165d382aafbSBarry Smith #else 2166d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2167d382aafbSBarry Smith #endif 2168d382aafbSBarry Smith 2169d382aafbSBarry Smith /* Special support for C++ */ 2170d382aafbSBarry Smith #include "petscsys.hh" 21716c7e564aSBarry Smith 2172d382aafbSBarry Smith 2173d382aafbSBarry Smith /*MC 2174d382aafbSBarry Smith 2175d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2176d382aafbSBarry Smith 2177d382aafbSBarry Smith $ 1) classic Fortran 77 style 2178d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc 2179d382aafbSBarry Smith $ XXX variablename 2180d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2181d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2182d382aafbSBarry Smith $ 2183d382aafbSBarry Smith $ 2) classic Fortran 90 style 2184d1716517SSatish Balay $#include "finclude/petscXXX.h" 2185d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2186d382aafbSBarry Smith $ XXX variablename 2187d382aafbSBarry Smith $ 2188d382aafbSBarry Smith $ 3) Using Fortran modules 2189d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2190d382aafbSBarry Smith $ use petscXXXX 2191d382aafbSBarry Smith $ XXX variablename 2192d382aafbSBarry Smith $ 2193d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2194d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2195d382aafbSBarry Smith $ use petscXXXX 2196d382aafbSBarry Smith $ type(XXX) variablename 2197e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2198d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2199d382aafbSBarry Smith 2200d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2201d382aafbSBarry Smith 2202d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2203d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2204d382aafbSBarry Smith $ integer variablename 2205d382aafbSBarry Smith $ 2206d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2207d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2208d382aafbSBarry Smith 2209d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2210d382aafbSBarry Smith for only a few PETSc functions. 2211d382aafbSBarry Smith 2212d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2213d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2214d382aafbSBarry Smith you cannot have something like 2215d382aafbSBarry Smith $ PetscInt row,col 2216d382aafbSBarry Smith $ PetscScalar val 2217d382aafbSBarry Smith $ ... 2218d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2219d382aafbSBarry Smith You must instead have 2220d382aafbSBarry Smith $ PetscInt row(1),col(1) 2221d382aafbSBarry Smith $ PetscScalar val(1) 2222d382aafbSBarry Smith $ ... 2223d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2224d382aafbSBarry Smith 2225d382aafbSBarry Smith 2226d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2227d382aafbSBarry Smith 2228d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2229d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2230d382aafbSBarry Smith 2231d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2232d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2233d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2234d382aafbSBarry Smith 2235d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2236e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2237d382aafbSBarry Smith 2238d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2239d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2240d382aafbSBarry Smith 2241d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2242d382aafbSBarry Smith automatically by "make allfortranstubs". 2243d382aafbSBarry Smith 2244e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2245d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2246d382aafbSBarry Smith include their predecessors 2247d382aafbSBarry Smith 2248d382aafbSBarry Smith Level: beginner 2249d382aafbSBarry Smith 2250d382aafbSBarry Smith M*/ 2251d382aafbSBarry Smith 22528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArchType(char[],size_t); 22538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetHostName(char[],size_t); 22548738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetUserName(char[],size_t); 22558738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetProgramName(char[],size_t); 22568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetProgramName(const char[]); 22578738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetDate(char[],size_t); 2258d382aafbSBarry Smith 22598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortInt(PetscInt,PetscInt[]); 22608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 22618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 22628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 22638738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 22648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 22658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 22668738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortReal(PetscInt,PetscReal[]); 22678738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 22688738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 22698738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2270ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2271d382aafbSBarry Smith 22728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDisplay(void); 22738738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetDisplay(char[],size_t); 2274d382aafbSBarry Smith 2275d382aafbSBarry Smith /*E 2276d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2277d382aafbSBarry Smith with an optional dynamic library name, for example 2278d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2279d382aafbSBarry Smith 2280d382aafbSBarry Smith Level: beginner 2281d382aafbSBarry Smith 2282e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2283d382aafbSBarry Smith with the option --download-sprng 2284d382aafbSBarry Smith 2285d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom 2286d382aafbSBarry Smith E*/ 2287d382aafbSBarry Smith #define PetscRandomType char* 2288d382aafbSBarry Smith #define PETSCRAND "rand" 2289d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2290d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2291d382aafbSBarry Smith 2292d382aafbSBarry Smith /* Logging support */ 22938738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_RANDOM_CLASSID; 2294d382aafbSBarry Smith 22958738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomInitializePackage(const char[]); 2296d382aafbSBarry Smith 2297d382aafbSBarry Smith /*S 2298d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2299d382aafbSBarry Smith 2300d382aafbSBarry Smith Level: intermediate 2301d382aafbSBarry Smith 2302d382aafbSBarry Smith Concepts: random numbers 2303d382aafbSBarry Smith 2304d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2305d382aafbSBarry Smith S*/ 2306d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2307d382aafbSBarry Smith 2308d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2309d382aafbSBarry Smith extern PetscFList PetscRandomList; 2310ace3abfcSBarry Smith extern PetscBool PetscRandomRegisterAllCalled; 2311d382aafbSBarry Smith 23128738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegisterAll(const char []); 23138738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 23148738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegisterDestroy(void); 23158738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetType(PetscRandom, const PetscRandomType); 23168738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetFromOptions(PetscRandom); 23178738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetType(PetscRandom, const PetscRandomType*); 23188738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomViewFromOptions(PetscRandom,char*); 23198738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomView(PetscRandom,PetscViewer); 2320d382aafbSBarry Smith 2321d382aafbSBarry Smith /*MC 2322d382aafbSBarry Smith PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2323d382aafbSBarry Smith 2324d382aafbSBarry Smith Synopsis: 23251890ba74SBarry Smith PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2326d382aafbSBarry Smith 2327d382aafbSBarry Smith Not Collective 2328d382aafbSBarry Smith 2329d382aafbSBarry Smith Input Parameters: 2330d382aafbSBarry Smith + name - The name of a new user-defined creation routine 2331d382aafbSBarry Smith . path - The path (either absolute or relative) of the library containing this routine 2332d382aafbSBarry Smith . func_name - The name of routine to create method context 2333d382aafbSBarry Smith - create_func - The creation routine itself 2334d382aafbSBarry Smith 2335d382aafbSBarry Smith Notes: 2336d382aafbSBarry Smith PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2337d382aafbSBarry Smith 2338d382aafbSBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2339d382aafbSBarry Smith 2340d382aafbSBarry Smith Sample usage: 2341d382aafbSBarry Smith .vb 2342d382aafbSBarry Smith PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2343d382aafbSBarry Smith .ve 2344d382aafbSBarry Smith 2345d382aafbSBarry Smith Then, your random type can be chosen with the procedural interface via 2346d382aafbSBarry Smith .vb 2347d382aafbSBarry Smith PetscRandomCreate(MPI_Comm, PetscRandom *); 2348d382aafbSBarry Smith PetscRandomSetType(PetscRandom,"my_random_name"); 2349d382aafbSBarry Smith .ve 2350d382aafbSBarry Smith or at runtime via the option 2351d382aafbSBarry Smith .vb 2352d382aafbSBarry Smith -random_type my_random_name 2353d382aafbSBarry Smith .ve 2354d382aafbSBarry Smith 2355d382aafbSBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2356d382aafbSBarry Smith 2357d382aafbSBarry Smith For an example of the code needed to interface your own random number generator see 2358d382aafbSBarry Smith src/sys/random/impls/rand/rand.c 2359d382aafbSBarry Smith 2360d382aafbSBarry Smith Level: advanced 2361d382aafbSBarry Smith 2362d382aafbSBarry Smith .keywords: PetscRandom, register 2363d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2364d382aafbSBarry Smith M*/ 2365d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2366d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2367d382aafbSBarry Smith #else 2368d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2369d382aafbSBarry Smith #endif 2370d382aafbSBarry Smith 23718738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomCreate(MPI_Comm,PetscRandom*); 23728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetValue(PetscRandom,PetscScalar*); 23738738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetValueReal(PetscRandom,PetscReal*); 23748738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 23758738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 23768738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetSeed(PetscRandom,unsigned long); 23778738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetSeed(PetscRandom,unsigned long *); 23788738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSeed(PetscRandom); 23798738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomDestroy(PetscRandom); 2380d382aafbSBarry Smith 23818738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetFullPath(const char[],char[],size_t); 23828738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetRelativePath(const char[],char[],size_t); 23838738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetWorkingDirectory(char[],size_t); 23848738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetRealPath(const char[],char[]); 23858738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetHomeDirectory(char[],size_t); 2386ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTestFile(const char[],char,PetscBool *); 2387ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTestDirectory(const char[],char,PetscBool *); 2388d382aafbSBarry Smith 23898738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryRead(int,void*,PetscInt,PetscDataType); 23908738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2391ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2392ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 23938738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryOpen(const char[],PetscFileMode,int *); 23948738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryClose(int); 2395ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSharedTmp(MPI_Comm,PetscBool *); 2396ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 23978738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetTmp(MPI_Comm,char[],size_t); 2398ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2399ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 24008738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenSocket(char*,int,int*); 2401a240c4b3SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscWebServe(MPI_Comm,int); 2402d382aafbSBarry Smith 2403d382aafbSBarry Smith /* 2404d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2405d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2406d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2407d382aafbSBarry Smith PetscBinarySeek(). 2408d382aafbSBarry Smith */ 2409d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2410d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2411d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2412d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2413d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2414d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2415d382aafbSBarry Smith 2416d382aafbSBarry Smith /*E 2417d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2418d382aafbSBarry Smith 2419d382aafbSBarry Smith Level: advanced 2420d382aafbSBarry Smith 2421d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2422d382aafbSBarry Smith E*/ 2423d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 24248738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 24258738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2426d382aafbSBarry Smith 24278738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebugTerminal(const char[]); 2428ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebugger(const char[],PetscBool ); 24298738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDefaultDebugger(void); 24308738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebuggerFromString(char*); 24318738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscAttachDebugger(void); 24328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStopForDebugger(void); 2433d382aafbSBarry Smith 24348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 24358738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 24368738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 24378738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 24388738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2439d382aafbSBarry Smith 2440ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2441d382aafbSBarry Smith 2442d382aafbSBarry Smith /*E 2443d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2444d382aafbSBarry Smith 2445d382aafbSBarry Smith Level: beginner 2446d382aafbSBarry Smith 2447d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2448d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2449d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2450d382aafbSBarry Smith E*/ 2451d382aafbSBarry Smith typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES} InsertMode; 2452d382aafbSBarry Smith 2453d382aafbSBarry Smith /*MC 2454d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2455d382aafbSBarry Smith 2456d382aafbSBarry Smith Level: beginner 2457d382aafbSBarry Smith 2458d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2459eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2460eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2461d382aafbSBarry Smith 2462d382aafbSBarry Smith M*/ 2463d382aafbSBarry Smith 2464d382aafbSBarry Smith /*MC 2465d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2466d382aafbSBarry Smith value into that location 2467d382aafbSBarry Smith 2468d382aafbSBarry Smith Level: beginner 2469d382aafbSBarry Smith 2470d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2471eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2472eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2473d382aafbSBarry Smith 2474d382aafbSBarry Smith M*/ 2475d382aafbSBarry Smith 2476d382aafbSBarry Smith /*MC 2477d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2478d382aafbSBarry Smith 2479d382aafbSBarry Smith Level: beginner 2480d382aafbSBarry Smith 2481d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2482d382aafbSBarry Smith 2483d382aafbSBarry Smith M*/ 2484d382aafbSBarry Smith 2485d382aafbSBarry Smith /*S 2486d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2487d382aafbSBarry Smith 2488d382aafbSBarry Smith Level: advanced 2489d382aafbSBarry Smith 2490d382aafbSBarry Smith Concepts: communicator, create 2491d382aafbSBarry Smith S*/ 2492d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2493d382aafbSBarry Smith 2494d382aafbSBarry Smith struct _n_PetscSubcomm { 2495d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2496d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2497d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 2498d382aafbSBarry Smith PetscInt n; /* num of subcommunicators under the parent communicator */ 2499d382aafbSBarry Smith PetscInt color; /* color of processors belong to this communicator */ 2500d382aafbSBarry Smith }; 2501d382aafbSBarry Smith 2502638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 2503638faf0bSHong Zhang extern const char *PetscSubcommTypes[]; 2504638faf0bSHong Zhang 2505d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 25068738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSubcommDestroy(PetscSubcomm); 2507d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2508d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetType(PetscSubcomm,const PetscSubcommType); 25091ba920a7SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt); 2510d382aafbSBarry Smith 2511d382aafbSBarry Smith PETSC_EXTERN_CXX_END 25126c7e564aSBarry Smith 2513d382aafbSBarry Smith #endif 2514