1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith # endif 25216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith # define _BSD_SOURCE 2773fca5a0SBarry Smith # endif 2807f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay # define _DEFAULT_SOURCE 3007f00807SSatish Balay # endif 31ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar # define _GNU_SOURCE 33ea0fecefSShri Abhyankar # endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36df4397b0SStefano Zampini #include <petscsystypes.h> 37df4397b0SStefano Zampini 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 402c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 41d382aafbSBarry Smith */ 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48c5e4d11fSDmitry Karpeev /* ========================================================================== */ 49c5e4d11fSDmitry Karpeev /* 50c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 511cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 521cc8b206SBarry Smith file within an extern "C". 53c5e4d11fSDmitry Karpeev */ 54c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 55c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 56c5e4d11fSDmitry Karpeev #endif 57c5e4d11fSDmitry Karpeev 58ed938b00SJed Brown #if defined(__cplusplus) 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 60ed938b00SJed Brown #else 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 62ed938b00SJed Brown #endif 63ed938b00SJed Brown 64ed938b00SJed Brown #if defined(__cplusplus) 6558c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 66ed938b00SJed Brown #else 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 7058c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7158c433abSLisandro Dalcin 72ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 73014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 74014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7726703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7826703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7926703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 81014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 82014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 84d382aafbSBarry Smith #else 85014dd563SJed Brown # define PETSC_DLLEXPORT 86014dd563SJed Brown # define PETSC_DLLIMPORT 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 88014dd563SJed Brown #endif 89014dd563SJed Brown 90014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 91014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 92014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 94014dd563SJed Brown #endif 95014dd563SJed Brown 961cc8b206SBarry Smith /* 971cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 981cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 991cc8b206SBarry Smith used from C and are always visible in the shared libraries 1001cc8b206SBarry Smith */ 1012c280183SJed Brown #if defined(__cplusplus) 102014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 103638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10421f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 105014dd563SJed Brown #else 106014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1086258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 109d382aafbSBarry Smith #endif 11027710113SBarry Smith 1112c8e378dSBarry Smith #include <petscversion.h> 112a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 113d382aafbSBarry Smith 114d382aafbSBarry Smith /* ========================================================================== */ 115d382aafbSBarry Smith 116d382aafbSBarry Smith /* 117d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 118d382aafbSBarry Smith 119d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 120d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 121d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 122d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 123d382aafbSBarry Smith mpicxx.h directly in their code 124d382aafbSBarry Smith */ 125fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 126d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 127fa9e63e2SJed Brown #endif 128fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 129d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 130fa9e63e2SJed Brown #endif 131e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 132e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 133e771154cSJed Brown #else 1342c8e378dSBarry Smith # include <mpi.h> 135e771154cSJed Brown #endif 13665013866SBarry Smith 1374e1ad211SJed Brown /*MC 1384e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1394e1ad211SJed Brown 1404e1ad211SJed Brown Notes: 1414e1ad211SJed Brown Typical usage is within normal code, 1424e1ad211SJed Brown 1434e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1444e1ad211SJed Brown 1454e1ad211SJed Brown but can also be used in the preprocessor, 1464e1ad211SJed Brown 1474e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1484e1ad211SJed Brown $ ... 1494e1ad211SJed Brown $ #else 1504e1ad211SJed Brown 1514e1ad211SJed Brown Either way evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1) or undefined. This macro 1524e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1534e1ad211SJed Brown 1544e1ad211SJed Brown Developer Notes: 1554e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1564e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1574e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1584e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1594e1ad211SJed Brown 1604e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1614e1ad211SJed Brown implementation of variadic macros. 1624e1ad211SJed Brown 1634e1ad211SJed Brown Level: developer 1644e1ad211SJed Brown M*/ 1654e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1664e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1674e1ad211SJed Brown # define PetscDefined_arg_ shift, 1684e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1694e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1704e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1714e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1724e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1734e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1744e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1754e1ad211SJed Brown #endif 1764e1ad211SJed Brown 177d382aafbSBarry Smith /* 178a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 179a7886beaSBarry Smith This usually happens because 180a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 181a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 182a7886beaSBarry Smith */ 183a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 184c9b973beSBarry Smith # if !defined(MPIUNI_H) 185a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 186a7886beaSBarry Smith # endif 18741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 18841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 18941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 19041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 19141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 19241f4af4cSSatish Balay # endif 19341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 19441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 19541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 19641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 19741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 19841f4af4cSSatish Balay # endif 199a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 20041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 201a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 202ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 203a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 204a7886beaSBarry Smith # endif 205a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 206a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 207a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 208ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 209c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 210a7886beaSBarry Smith # endif 211d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 212d97fd468SStefano Zampini # if !defined(MSMPI_VER) 213d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 214d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 215d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 216d97fd468SStefano Zampini # endif 217d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 218d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 219a7886beaSBarry Smith #endif 220a7886beaSBarry Smith 221a7886beaSBarry Smith /* 2222981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 223d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 224d382aafbSBarry Smith */ 225d382aafbSBarry Smith #include <stdio.h> 226d382aafbSBarry Smith 227d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 228d382aafbSBarry Smith #if !defined(MPIAPI) 229d382aafbSBarry Smith #define MPIAPI 230d382aafbSBarry Smith #endif 231d382aafbSBarry Smith 2321cc8b206SBarry Smith /* 2331cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2341cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2351cc8b206SBarry Smith does not match the actual type of the argument being passed in 2361cc8b206SBarry Smith */ 237c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 238894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 239894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2408ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2418ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 242894dd566SJed Brown # endif 243894dd566SJed Brown #endif 244894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 245894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2468ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2478ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 248894dd566SJed Brown #endif 249b3506946SBarry Smith 2505a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 251df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 252e28ce29aSPatrick Sanan 253e28ce29aSPatrick Sanan /*MC 254e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 255e28ce29aSPatrick Sanan 256e28ce29aSPatrick Sanan Notes: 257e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 258e28ce29aSPatrick Sanan 259e28ce29aSPatrick Sanan Level: beginner 260e28ce29aSPatrick Sanan 261e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 262e28ce29aSPatrick Sanan M*/ 263e28ce29aSPatrick Sanan 26437354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 265bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 266a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 267fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 268bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 269a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 270f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 271bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 272a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 273236ed0a3SSatish Balay #else 274bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 275236ed0a3SSatish Balay #endif 276b7b8f77aSBarry Smith 2777cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 278b7b8f77aSBarry Smith 279d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 280bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 281a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 282d382aafbSBarry Smith #else 283d382aafbSBarry Smith # define MPIU_INT MPI_INT 284a05e1a72SSatish Balay # define PetscInt_FMT "d" 285d382aafbSBarry Smith #endif 286d382aafbSBarry Smith 287503cfb0cSBarry Smith /* 288503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 289503cfb0cSBarry Smith */ 290e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 291d382aafbSBarry Smith 292d382aafbSBarry Smith /* 293d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 294d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 295d382aafbSBarry Smith */ 296014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 297d382aafbSBarry Smith 298d382aafbSBarry Smith /* 299d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 300d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 301d382aafbSBarry Smith */ 302014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 303d382aafbSBarry Smith 304d382aafbSBarry Smith /*MC 305d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 306d382aafbSBarry Smith 307d382aafbSBarry Smith Synopsis: 308aaa7dc30SBarry Smith #include <petscsys.h> 309ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 310d382aafbSBarry Smith 311eca87e8dSBarry Smith Not Collective 312eca87e8dSBarry Smith 313d382aafbSBarry Smith Input Parameters: 314d382aafbSBarry Smith . cond - condition or expression 315d382aafbSBarry Smith 316e28ce29aSPatrick Sanan Notes: 317e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 318d382aafbSBarry Smith branch is unlikely. 319d382aafbSBarry Smith 320d382aafbSBarry Smith Level: advanced 321d382aafbSBarry Smith 322cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 323d382aafbSBarry Smith M*/ 324d382aafbSBarry Smith 325d382aafbSBarry Smith /*MC 326d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 327d382aafbSBarry Smith 328d382aafbSBarry Smith Synopsis: 329aaa7dc30SBarry Smith #include <petscsys.h> 33023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 331d382aafbSBarry Smith 332eca87e8dSBarry Smith Not Collective 333eca87e8dSBarry Smith 334d382aafbSBarry Smith Input Parameters: 335d382aafbSBarry Smith . cond - condition or expression 336d382aafbSBarry Smith 337e28ce29aSPatrick Sanan Notes: 338e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 339d382aafbSBarry Smith branch is likely. 340d382aafbSBarry Smith 341d382aafbSBarry Smith Level: advanced 342d382aafbSBarry Smith 343d382aafbSBarry Smith .seealso: PetscUnlikely() 344d382aafbSBarry Smith M*/ 345d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 346d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 347d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 348d382aafbSBarry Smith #else 349cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 350cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 351d382aafbSBarry Smith #endif 352d382aafbSBarry Smith 353cf9c20a2SJed Brown /*MC 354cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 355cf9c20a2SJed Brown 356cf9c20a2SJed Brown Synopsis: 357cf9c20a2SJed Brown #include <petscsys.h> 358cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 359cf9c20a2SJed Brown 360cf9c20a2SJed Brown Not Collective 361cf9c20a2SJed Brown 362cf9c20a2SJed Brown Input Parameters: 363cf9c20a2SJed Brown . cond - condition or expression 364cf9c20a2SJed Brown 365cf9c20a2SJed Brown Notes: 366cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 367cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 368cf9c20a2SJed Brown 369cf9c20a2SJed Brown Level: advanced 370cf9c20a2SJed Brown 371cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 372cf9c20a2SJed Brown M*/ 373cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 374cf9c20a2SJed Brown 375d382aafbSBarry Smith /* 376d382aafbSBarry Smith Declare extern C stuff after including external header files 377d382aafbSBarry Smith */ 378d382aafbSBarry Smith 3796a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 38070b3c8c7SBarry Smith 3818b49ba18SBarry Smith /* 382390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 3838b49ba18SBarry Smith */ 3848b49ba18SBarry Smith #include <petscmath.h> 3858b49ba18SBarry Smith 3866a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 387d382aafbSBarry Smith 388d382aafbSBarry Smith /*MC 3890298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 390d382aafbSBarry Smith 391d382aafbSBarry Smith Level: beginner 392d382aafbSBarry Smith 393e28ce29aSPatrick Sanan Note: 394e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 395d382aafbSBarry Smith some default 396d382aafbSBarry Smith 397e28ce29aSPatrick Sanan Fortran Notes: 398e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 399d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 400d382aafbSBarry Smith 401e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 402d382aafbSBarry Smith 403d382aafbSBarry Smith M*/ 4040298fd71SBarry Smith #define PETSC_IGNORE NULL 405d382aafbSBarry Smith 406c528d872SBarry Smith /* This is deprecated */ 407c528d872SBarry Smith #define PETSC_NULL NULL 408c528d872SBarry Smith 409d382aafbSBarry Smith /*MC 410557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 411557d4da8SBarry Smith where you wish PETSc to use the default. 412557d4da8SBarry Smith 413557d4da8SBarry Smith Level: beginner 414557d4da8SBarry Smith 415e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 416557d4da8SBarry Smith 417557d4da8SBarry Smith M*/ 418557d4da8SBarry Smith #define PETSC_DECIDE -1 419557d4da8SBarry Smith 420557d4da8SBarry Smith /*MC 421d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 422d382aafbSBarry Smith where you wish PETSc to compute the required value. 423d382aafbSBarry Smith 424d382aafbSBarry Smith Level: beginner 425d382aafbSBarry Smith 426e28ce29aSPatrick Sanan Developer Note: 427e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 428557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 429557d4da8SBarry Smith 4300298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 431d382aafbSBarry Smith 432d382aafbSBarry Smith M*/ 433d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 434d382aafbSBarry Smith 435d382aafbSBarry Smith /*MC 436557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 437557d4da8SBarry Smith where you wish PETSc to use the default. 438557d4da8SBarry Smith 439557d4da8SBarry Smith Level: beginner 440557d4da8SBarry Smith 441e28ce29aSPatrick Sanan Fortran Notes: 442e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 443557d4da8SBarry Smith 4440298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 445557d4da8SBarry Smith 446557d4da8SBarry Smith M*/ 447557d4da8SBarry Smith #define PETSC_DEFAULT -2 448557d4da8SBarry Smith 449557d4da8SBarry Smith /*MC 450d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 451ea8fe74dSBarry Smith all the processes that PETSc knows about. 452d382aafbSBarry Smith 453d382aafbSBarry Smith Level: beginner 454d382aafbSBarry Smith 455e28ce29aSPatrick Sanan Notes: 456e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 457d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 458d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 459a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 460a990b902SBarry Smith 461a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 462a990b902SBarry Smith is called because it may not have a valid value yet. 463d382aafbSBarry Smith 464d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 465d382aafbSBarry Smith 466d382aafbSBarry Smith M*/ 467014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 468d382aafbSBarry Smith 469d382aafbSBarry Smith /*MC 470503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 471d382aafbSBarry Smith 472d382aafbSBarry Smith Level: beginner 473d382aafbSBarry Smith 474e28ce29aSPatrick Sanan Notes: 475e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 476a990b902SBarry Smith 477d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 478d382aafbSBarry Smith 479d382aafbSBarry Smith M*/ 480d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 481d382aafbSBarry Smith 482*6de5d289SStefano Zampini /*MC 483*6de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 484*6de5d289SStefano Zampini MPI with MPI_Init_thread. 485*6de5d289SStefano Zampini 486*6de5d289SStefano Zampini Level: beginner 487*6de5d289SStefano Zampini 488*6de5d289SStefano Zampini Notes: 489*6de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 490*6de5d289SStefano Zampini 491*6de5d289SStefano Zampini .seealso: PetscInitialize() 492*6de5d289SStefano Zampini 493*6de5d289SStefano Zampini M*/ 494*6de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 495*6de5d289SStefano Zampini 496d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 497014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 498014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 4994cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 50082f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 501d382aafbSBarry Smith 502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 505d382aafbSBarry Smith 5067381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 5077381773fSBarry Smith PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm); 5087381773fSBarry Smith #endif 5097381773fSBarry Smith 510d382aafbSBarry Smith /*MC 51195dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 512d382aafbSBarry Smith 513eca87e8dSBarry Smith Synopsis: 514aaa7dc30SBarry Smith #include <petscsys.h> 515eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 516eca87e8dSBarry Smith 517eca87e8dSBarry Smith Not Collective 518eca87e8dSBarry Smith 519d382aafbSBarry Smith Input Parameter: 520d382aafbSBarry Smith . m - number of bytes to allocate 521d382aafbSBarry Smith 522d382aafbSBarry Smith Output Parameter: 523d382aafbSBarry Smith . result - memory allocated 524d382aafbSBarry Smith 525d382aafbSBarry Smith Level: beginner 526d382aafbSBarry Smith 52749d7da52SJed Brown Notes: 52849d7da52SJed Brown Memory is always allocated at least double aligned 529d382aafbSBarry Smith 53049d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 531d382aafbSBarry Smith 532d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 533d382aafbSBarry Smith 534d382aafbSBarry Smith M*/ 535071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 536d382aafbSBarry Smith 537d382aafbSBarry Smith /*MC 5383221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5393221ece2SMatthew G. Knepley 5403221ece2SMatthew G. Knepley Synopsis: 5413221ece2SMatthew G. Knepley #include <petscsys.h> 5423221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5433221ece2SMatthew G. Knepley 5443221ece2SMatthew G. Knepley Not Collective 5453221ece2SMatthew G. Knepley 5463221ece2SMatthew G. Knepley Input Parameters: 5473221ece2SMatthew G. Knepley + m - number of bytes to allocate 54892f119d6SBarry Smith - result - previous memory 5493221ece2SMatthew G. Knepley 5503221ece2SMatthew G. Knepley Output Parameter: 5513221ece2SMatthew G. Knepley . result - new memory allocated 5523221ece2SMatthew G. Knepley 5533221ece2SMatthew G. Knepley Level: developer 5543221ece2SMatthew G. Knepley 5553221ece2SMatthew G. Knepley Notes: 5563221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 5573221ece2SMatthew G. Knepley 5583221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 5593221ece2SMatthew G. Knepley 5603221ece2SMatthew G. Knepley M*/ 5613221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 5623221ece2SMatthew G. Knepley 5633221ece2SMatthew G. Knepley /*MC 564503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 565d382aafbSBarry Smith 566d382aafbSBarry Smith Synopsis: 567aaa7dc30SBarry Smith #include <petscsys.h> 568d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 569d382aafbSBarry Smith 570eca87e8dSBarry Smith Not Collective 571eca87e8dSBarry Smith 572eca87e8dSBarry Smith Input Parameters: 573eca87e8dSBarry Smith . addr - address to align (any pointer type) 574eca87e8dSBarry Smith 575d382aafbSBarry Smith Level: developer 576d382aafbSBarry Smith 577d382aafbSBarry Smith .seealso: PetscMallocAlign() 578d382aafbSBarry Smith 579d382aafbSBarry Smith M*/ 580d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 581d382aafbSBarry Smith 582d382aafbSBarry Smith /*MC 583785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 584d382aafbSBarry Smith 585eca87e8dSBarry Smith Synopsis: 586aaa7dc30SBarry Smith #include <petscsys.h> 587785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 588785e854fSJed Brown 589785e854fSJed Brown Not Collective 590785e854fSJed Brown 591785e854fSJed Brown Input Parameter: 592390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 593785e854fSJed Brown 594785e854fSJed Brown Output Parameter: 5951fe1b817SJunchao Zhang . r1 - memory allocated 596785e854fSJed Brown 597e28ce29aSPatrick Sanan Note: 598e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 599390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 600390e1bf2SBarry Smith $ PetscInt *id; 601390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 602390e1bf2SBarry Smith not 603390e1bf2SBarry Smith $ PetscInt *id; 604390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 605390e1bf2SBarry Smith 6061fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 607390e1bf2SBarry Smith 608390e1bf2SBarry Smith Level: beginner 609785e854fSJed Brown 6101795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 611785e854fSJed Brown 612785e854fSJed Brown M*/ 6132553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 614785e854fSJed Brown 615785e854fSJed Brown /*MC 6161795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6171795a4d1SJed Brown 6181795a4d1SJed Brown Synopsis: 619aaa7dc30SBarry Smith #include <petscsys.h> 6201795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6211795a4d1SJed Brown 6221795a4d1SJed Brown Not Collective 6231795a4d1SJed Brown 6241795a4d1SJed Brown Input Parameter: 6251795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6261795a4d1SJed Brown 6271795a4d1SJed Brown Output Parameter: 6281fe1b817SJunchao Zhang . r1 - memory allocated 6291795a4d1SJed Brown 630e28ce29aSPatrick Sanan Notes: 631e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 632390e1bf2SBarry Smith 633390e1bf2SBarry Smith Level: beginner 6341795a4d1SJed Brown 6351795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6361795a4d1SJed Brown 6371795a4d1SJed Brown M*/ 6382553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 6391795a4d1SJed Brown 6401795a4d1SJed Brown /*MC 641dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 642d382aafbSBarry Smith 643eca87e8dSBarry Smith Synopsis: 644aaa7dc30SBarry Smith #include <petscsys.h> 645dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 646eca87e8dSBarry Smith 647eca87e8dSBarry Smith Not Collective 648eca87e8dSBarry Smith 649d382aafbSBarry Smith Input Parameter: 650d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 651dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 652d382aafbSBarry Smith 653d382aafbSBarry Smith Output Parameter: 654d382aafbSBarry Smith + r1 - memory allocated in first chunk 655d382aafbSBarry Smith - r2 - memory allocated in second chunk 656d382aafbSBarry Smith 657d382aafbSBarry Smith Level: developer 658d382aafbSBarry Smith 6591795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 660d382aafbSBarry Smith 661d382aafbSBarry Smith M*/ 6622553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 663d382aafbSBarry Smith 664d382aafbSBarry Smith /*MC 6651795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 666d382aafbSBarry Smith 667eca87e8dSBarry Smith Synopsis: 668aaa7dc30SBarry Smith #include <petscsys.h> 6691795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 670eca87e8dSBarry Smith 671eca87e8dSBarry Smith Not Collective 672eca87e8dSBarry Smith 673d382aafbSBarry Smith Input Parameter: 674d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 6751795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 6761795a4d1SJed Brown 6771795a4d1SJed Brown Output Parameter: 6781795a4d1SJed Brown + r1 - memory allocated in first chunk 6791795a4d1SJed Brown - r2 - memory allocated in second chunk 6801795a4d1SJed Brown 6811795a4d1SJed Brown Level: developer 6821795a4d1SJed Brown 6831795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 6841795a4d1SJed Brown 6851795a4d1SJed Brown M*/ 6862553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 6871795a4d1SJed Brown 6881795a4d1SJed Brown /*MC 689dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 690d382aafbSBarry Smith 691d382aafbSBarry Smith Synopsis: 692aaa7dc30SBarry Smith #include <petscsys.h> 693dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 694d382aafbSBarry Smith 695d382aafbSBarry Smith Not Collective 696d382aafbSBarry Smith 697d382aafbSBarry Smith Input Parameter: 698d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 699d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 700dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 701d382aafbSBarry Smith 702d382aafbSBarry Smith Output Parameter: 703d382aafbSBarry Smith + r1 - memory allocated in first chunk 704d382aafbSBarry Smith . r2 - memory allocated in second chunk 705d382aafbSBarry Smith - r3 - memory allocated in third chunk 706d382aafbSBarry Smith 707d382aafbSBarry Smith Level: developer 708d382aafbSBarry Smith 7091795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 710d382aafbSBarry Smith 711d382aafbSBarry Smith M*/ 7122553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 713d382aafbSBarry Smith 714d382aafbSBarry Smith /*MC 7151795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 716d382aafbSBarry Smith 717eca87e8dSBarry Smith Synopsis: 718aaa7dc30SBarry Smith #include <petscsys.h> 7191795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 720eca87e8dSBarry Smith 721eca87e8dSBarry Smith Not Collective 722eca87e8dSBarry Smith 723d382aafbSBarry Smith Input Parameter: 724d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 725d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7261795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7271795a4d1SJed Brown 7281795a4d1SJed Brown Output Parameter: 7291795a4d1SJed Brown + r1 - memory allocated in first chunk 7301795a4d1SJed Brown . r2 - memory allocated in second chunk 7311795a4d1SJed Brown - r3 - memory allocated in third chunk 7321795a4d1SJed Brown 7331795a4d1SJed Brown Level: developer 7341795a4d1SJed Brown 7351795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7361795a4d1SJed Brown 7371795a4d1SJed Brown M*/ 7382553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 7391795a4d1SJed Brown 7401795a4d1SJed Brown /*MC 741dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 742d382aafbSBarry Smith 743d382aafbSBarry Smith Synopsis: 744aaa7dc30SBarry Smith #include <petscsys.h> 745dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 746d382aafbSBarry Smith 747d382aafbSBarry Smith Not Collective 748d382aafbSBarry Smith 749d382aafbSBarry Smith Input Parameter: 750d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 751d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 752d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 753dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 754d382aafbSBarry Smith 755d382aafbSBarry Smith Output Parameter: 756d382aafbSBarry Smith + r1 - memory allocated in first chunk 757d382aafbSBarry Smith . r2 - memory allocated in second chunk 758d382aafbSBarry Smith . r3 - memory allocated in third chunk 759d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 760d382aafbSBarry Smith 761d382aafbSBarry Smith Level: developer 762d382aafbSBarry Smith 7631795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 764d382aafbSBarry Smith 765d382aafbSBarry Smith M*/ 7662553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 767d382aafbSBarry Smith 768d382aafbSBarry Smith /*MC 7691795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 770d382aafbSBarry Smith 771eca87e8dSBarry Smith Synopsis: 772aaa7dc30SBarry Smith #include <petscsys.h> 7731795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 774eca87e8dSBarry Smith 775eca87e8dSBarry Smith Not Collective 776eca87e8dSBarry Smith 777e28ce29aSPatrick Sanan Input Parameters: 778d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 779d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 780d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 7811795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 7821795a4d1SJed Brown 783e28ce29aSPatrick Sanan Output Parameters: 7841795a4d1SJed Brown + r1 - memory allocated in first chunk 7851795a4d1SJed Brown . r2 - memory allocated in second chunk 7861795a4d1SJed Brown . r3 - memory allocated in third chunk 7871795a4d1SJed Brown - r4 - memory allocated in fourth chunk 7881795a4d1SJed Brown 7891795a4d1SJed Brown Level: developer 7901795a4d1SJed Brown 7911795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 7921795a4d1SJed Brown 7931795a4d1SJed Brown M*/ 7942553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 7951795a4d1SJed Brown 7961795a4d1SJed Brown /*MC 797dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 798d382aafbSBarry Smith 799d382aafbSBarry Smith Synopsis: 800aaa7dc30SBarry Smith #include <petscsys.h> 801dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 802d382aafbSBarry Smith 803d382aafbSBarry Smith Not Collective 804d382aafbSBarry Smith 805e28ce29aSPatrick Sanan Input Parameters: 806d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 807d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 808d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 809d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 810dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 811d382aafbSBarry Smith 812e28ce29aSPatrick Sanan Output Parameters: 813d382aafbSBarry Smith + r1 - memory allocated in first chunk 814d382aafbSBarry Smith . r2 - memory allocated in second chunk 815d382aafbSBarry Smith . r3 - memory allocated in third chunk 816d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 817d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 818d382aafbSBarry Smith 819d382aafbSBarry Smith Level: developer 820d382aafbSBarry Smith 8211795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 822d382aafbSBarry Smith 823d382aafbSBarry Smith M*/ 8242553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 825d382aafbSBarry Smith 826d382aafbSBarry Smith /*MC 8271795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 828d382aafbSBarry Smith 829eca87e8dSBarry Smith Synopsis: 830aaa7dc30SBarry Smith #include <petscsys.h> 8311795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 832eca87e8dSBarry Smith 833eca87e8dSBarry Smith Not Collective 834eca87e8dSBarry Smith 835e28ce29aSPatrick Sanan Input Parameters: 836d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 837d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 838d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 839d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 8401795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 8411795a4d1SJed Brown 842e28ce29aSPatrick Sanan Output Parameters: 8431795a4d1SJed Brown + r1 - memory allocated in first chunk 8441795a4d1SJed Brown . r2 - memory allocated in second chunk 8451795a4d1SJed Brown . r3 - memory allocated in third chunk 8461795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8471795a4d1SJed Brown - r5 - memory allocated in fifth chunk 8481795a4d1SJed Brown 8491795a4d1SJed Brown Level: developer 8501795a4d1SJed Brown 8511795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 8521795a4d1SJed Brown 8531795a4d1SJed Brown M*/ 8542553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 855d382aafbSBarry Smith 856d382aafbSBarry Smith /*MC 857dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 858d382aafbSBarry Smith 859d382aafbSBarry Smith Synopsis: 860aaa7dc30SBarry Smith #include <petscsys.h> 861dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 862d382aafbSBarry Smith 863d382aafbSBarry Smith Not Collective 864d382aafbSBarry Smith 865e28ce29aSPatrick Sanan Input Parameters: 866d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 867d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 868d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 869d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 870d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 871dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 872d382aafbSBarry Smith 873e28ce29aSPatrick Sanan Output Parameteasr: 874d382aafbSBarry Smith + r1 - memory allocated in first chunk 875d382aafbSBarry Smith . r2 - memory allocated in second chunk 876d382aafbSBarry Smith . r3 - memory allocated in third chunk 877d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 878d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 879d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 880d382aafbSBarry Smith 881d382aafbSBarry Smith Level: developer 882d382aafbSBarry Smith 8831795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 884d382aafbSBarry Smith 885d382aafbSBarry Smith M*/ 8862553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 887d382aafbSBarry Smith 888d382aafbSBarry Smith /*MC 8891795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 890d382aafbSBarry Smith 891eca87e8dSBarry Smith Synopsis: 892aaa7dc30SBarry Smith #include <petscsys.h> 8931795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 894eca87e8dSBarry Smith 895eca87e8dSBarry Smith Not Collective 896eca87e8dSBarry Smith 897e28ce29aSPatrick Sanan Input Parameters: 898d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 899d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 900d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 901d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 902d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9031795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9041795a4d1SJed Brown 905e28ce29aSPatrick Sanan Output Parameters: 9061795a4d1SJed Brown + r1 - memory allocated in first chunk 9071795a4d1SJed Brown . r2 - memory allocated in second chunk 9081795a4d1SJed Brown . r3 - memory allocated in third chunk 9091795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9101795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9111795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9121795a4d1SJed Brown 9131795a4d1SJed Brown Level: developer 9141795a4d1SJed Brown 9151795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9161795a4d1SJed Brown 9171795a4d1SJed Brown M*/ 9182553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9191795a4d1SJed Brown 9201795a4d1SJed Brown /*MC 921dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 922d382aafbSBarry Smith 923d382aafbSBarry Smith Synopsis: 924aaa7dc30SBarry Smith #include <petscsys.h> 925dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 926d382aafbSBarry Smith 927d382aafbSBarry Smith Not Collective 928d382aafbSBarry Smith 929e28ce29aSPatrick Sanan Input Parameters: 930d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 931d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 932d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 933d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 934d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 935d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 936dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 937d382aafbSBarry Smith 938e28ce29aSPatrick Sanan Output Parameters: 939d382aafbSBarry Smith + r1 - memory allocated in first chunk 940d382aafbSBarry Smith . r2 - memory allocated in second chunk 941d382aafbSBarry Smith . r3 - memory allocated in third chunk 942d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 943d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 944d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 945eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 946d382aafbSBarry Smith 947d382aafbSBarry Smith Level: developer 948d382aafbSBarry Smith 9491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 950d382aafbSBarry Smith 951d382aafbSBarry Smith M*/ 9522553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 953d382aafbSBarry Smith 954d382aafbSBarry Smith /*MC 9551795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 9561795a4d1SJed Brown 9571795a4d1SJed Brown Synopsis: 958aaa7dc30SBarry Smith #include <petscsys.h> 9591795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 9601795a4d1SJed Brown 9611795a4d1SJed Brown Not Collective 9621795a4d1SJed Brown 963e28ce29aSPatrick Sanan Input Parameters: 9641795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 9651795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 9661795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 9671795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 9681795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 9691795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 9701795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 9711795a4d1SJed Brown 972e28ce29aSPatrick Sanan Output Parameters: 9731795a4d1SJed Brown + r1 - memory allocated in first chunk 9741795a4d1SJed Brown . r2 - memory allocated in second chunk 9751795a4d1SJed Brown . r3 - memory allocated in third chunk 9761795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9771795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9781795a4d1SJed Brown . r6 - memory allocated in sixth chunk 9791795a4d1SJed Brown - r7 - memory allocated in seventh chunk 9801795a4d1SJed Brown 9811795a4d1SJed Brown Level: developer 9821795a4d1SJed Brown 9831795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 9841795a4d1SJed Brown 9851795a4d1SJed Brown M*/ 9862553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 9871795a4d1SJed Brown 9881795a4d1SJed Brown /*MC 989503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 990d382aafbSBarry Smith 991eca87e8dSBarry Smith Synopsis: 992aaa7dc30SBarry Smith #include <petscsys.h> 993b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 994eca87e8dSBarry Smith 995eca87e8dSBarry Smith Not Collective 996eca87e8dSBarry Smith 997d382aafbSBarry Smith Output Parameter: 998b00a9115SJed Brown . result - memory allocated, sized to match pointer type 999d382aafbSBarry Smith 1000d382aafbSBarry Smith Level: beginner 1001d382aafbSBarry Smith 1002390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1003d382aafbSBarry Smith 1004d382aafbSBarry Smith M*/ 1005b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1006ad0619ddSBarry Smith 1007ad0619ddSBarry Smith /*MC 1008b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1009ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1010ad0619ddSBarry Smith 1011ad0619ddSBarry Smith Synopsis: 1012aaa7dc30SBarry Smith #include <petscsys.h> 1013b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1014ad0619ddSBarry Smith 1015ad0619ddSBarry Smith Not Collective 1016ad0619ddSBarry Smith 1017ad0619ddSBarry Smith Input Parameter: 1018b00a9115SJed Brown . obj - object memory is logged to 1019ad0619ddSBarry Smith 1020ad0619ddSBarry Smith Output Parameter: 1021b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1022ad0619ddSBarry Smith 1023ad0619ddSBarry Smith Level: developer 1024ad0619ddSBarry Smith 1025390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1026ad0619ddSBarry Smith 1027ad0619ddSBarry Smith M*/ 1028d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1029d382aafbSBarry Smith 1030d382aafbSBarry Smith /*MC 1031d382aafbSBarry Smith PetscFree - Frees memory 1032d382aafbSBarry Smith 1033eca87e8dSBarry Smith Synopsis: 1034aaa7dc30SBarry Smith #include <petscsys.h> 1035eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1036eca87e8dSBarry Smith 1037eca87e8dSBarry Smith Not Collective 1038eca87e8dSBarry Smith 1039d382aafbSBarry Smith Input Parameter: 10407f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1041d382aafbSBarry Smith 1042d382aafbSBarry Smith Level: beginner 1043d382aafbSBarry Smith 104449d7da52SJed Brown Notes: 1045390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1046390e1bf2SBarry Smith 104749d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1048d382aafbSBarry Smith 1049390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1050d382aafbSBarry Smith 1051d382aafbSBarry Smith M*/ 1052ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1053d382aafbSBarry Smith 1054d382aafbSBarry Smith /*MC 1055d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1056d382aafbSBarry Smith 1057eca87e8dSBarry Smith Synopsis: 1058aaa7dc30SBarry Smith #include <petscsys.h> 1059eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1060eca87e8dSBarry Smith 1061eca87e8dSBarry Smith Not Collective 1062eca87e8dSBarry Smith 1063e28ce29aSPatrick Sanan Input Parameters: 1064d382aafbSBarry Smith + memory1 - memory to free 1065d382aafbSBarry Smith - memory2 - 2nd memory to free 1066d382aafbSBarry Smith 1067d382aafbSBarry Smith Level: developer 1068d382aafbSBarry Smith 106995452b02SPatrick Sanan Notes: 107095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1071d382aafbSBarry Smith 1072d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1073d382aafbSBarry Smith 1074d382aafbSBarry Smith M*/ 1075ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1076d382aafbSBarry Smith 1077d382aafbSBarry Smith /*MC 1078d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1079d382aafbSBarry Smith 1080eca87e8dSBarry Smith Synopsis: 1081aaa7dc30SBarry Smith #include <petscsys.h> 1082eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1083eca87e8dSBarry Smith 1084eca87e8dSBarry Smith Not Collective 1085eca87e8dSBarry Smith 1086e28ce29aSPatrick Sanan Input Parameters: 1087d382aafbSBarry Smith + memory1 - memory to free 1088d382aafbSBarry Smith . memory2 - 2nd memory to free 1089d382aafbSBarry Smith - memory3 - 3rd memory to free 1090d382aafbSBarry Smith 1091d382aafbSBarry Smith Level: developer 1092d382aafbSBarry Smith 109395452b02SPatrick Sanan Notes: 109495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1095d382aafbSBarry Smith 1096d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1097d382aafbSBarry Smith 1098d382aafbSBarry Smith M*/ 1099ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1100d382aafbSBarry Smith 1101d382aafbSBarry Smith /*MC 1102d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1103d382aafbSBarry Smith 1104eca87e8dSBarry Smith Synopsis: 1105aaa7dc30SBarry Smith #include <petscsys.h> 1106eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1107eca87e8dSBarry Smith 1108eca87e8dSBarry Smith Not Collective 1109eca87e8dSBarry Smith 1110e28ce29aSPatrick Sanan Input Parameters: 1111d382aafbSBarry Smith + m1 - memory to free 1112d382aafbSBarry Smith . m2 - 2nd memory to free 1113d382aafbSBarry Smith . m3 - 3rd memory to free 1114d382aafbSBarry Smith - m4 - 4th memory to free 1115d382aafbSBarry Smith 1116d382aafbSBarry Smith Level: developer 1117d382aafbSBarry Smith 111895452b02SPatrick Sanan Notes: 111995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1120d382aafbSBarry Smith 1121d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1122d382aafbSBarry Smith 1123d382aafbSBarry Smith M*/ 1124ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1125d382aafbSBarry Smith 1126d382aafbSBarry Smith /*MC 1127d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1128d382aafbSBarry Smith 1129eca87e8dSBarry Smith Synopsis: 1130aaa7dc30SBarry Smith #include <petscsys.h> 1131eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1132eca87e8dSBarry Smith 1133eca87e8dSBarry Smith Not Collective 1134eca87e8dSBarry Smith 1135e28ce29aSPatrick Sanan Input Parameters: 1136d382aafbSBarry Smith + m1 - memory to free 1137d382aafbSBarry Smith . m2 - 2nd memory to free 1138d382aafbSBarry Smith . m3 - 3rd memory to free 1139d382aafbSBarry Smith . m4 - 4th memory to free 1140d382aafbSBarry Smith - m5 - 5th memory to free 1141d382aafbSBarry Smith 1142d382aafbSBarry Smith Level: developer 1143d382aafbSBarry Smith 114495452b02SPatrick Sanan Notes: 114595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1146d382aafbSBarry Smith 1147d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1148d382aafbSBarry Smith 1149d382aafbSBarry Smith M*/ 1150ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1151d382aafbSBarry Smith 1152d382aafbSBarry Smith /*MC 1153d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1154d382aafbSBarry Smith 1155eca87e8dSBarry Smith Synopsis: 1156aaa7dc30SBarry Smith #include <petscsys.h> 1157eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1158eca87e8dSBarry Smith 1159eca87e8dSBarry Smith Not Collective 1160eca87e8dSBarry Smith 1161e28ce29aSPatrick Sanan Input Parameters: 1162d382aafbSBarry Smith + m1 - memory to free 1163d382aafbSBarry Smith . m2 - 2nd memory to free 1164d382aafbSBarry Smith . m3 - 3rd memory to free 1165d382aafbSBarry Smith . m4 - 4th memory to free 1166d382aafbSBarry Smith . m5 - 5th memory to free 1167d382aafbSBarry Smith - m6 - 6th memory to free 1168d382aafbSBarry Smith 1169d382aafbSBarry Smith 1170d382aafbSBarry Smith Level: developer 1171d382aafbSBarry Smith 117295452b02SPatrick Sanan Notes: 117395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1174d382aafbSBarry Smith 1175d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1176d382aafbSBarry Smith 1177d382aafbSBarry Smith M*/ 1178ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1179d382aafbSBarry Smith 1180d382aafbSBarry Smith /*MC 1181d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1182d382aafbSBarry Smith 1183eca87e8dSBarry Smith Synopsis: 1184aaa7dc30SBarry Smith #include <petscsys.h> 1185eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1186eca87e8dSBarry Smith 1187eca87e8dSBarry Smith Not Collective 1188eca87e8dSBarry Smith 1189e28ce29aSPatrick Sanan Input Parameters: 1190d382aafbSBarry Smith + m1 - memory to free 1191d382aafbSBarry Smith . m2 - 2nd memory to free 1192d382aafbSBarry Smith . m3 - 3rd memory to free 1193d382aafbSBarry Smith . m4 - 4th memory to free 1194d382aafbSBarry Smith . m5 - 5th memory to free 1195d382aafbSBarry Smith . m6 - 6th memory to free 1196d382aafbSBarry Smith - m7 - 7th memory to free 1197d382aafbSBarry Smith 1198d382aafbSBarry Smith 1199d382aafbSBarry Smith Level: developer 1200d382aafbSBarry Smith 120195452b02SPatrick Sanan Notes: 120295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1203d382aafbSBarry Smith 1204d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1205d382aafbSBarry Smith PetscMalloc7() 1206d382aafbSBarry Smith 1207d382aafbSBarry Smith M*/ 1208ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1209d382aafbSBarry Smith 1210ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1211ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1212071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1213efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12143221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1215ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 121692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1217014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1218d382aafbSBarry Smith 1219d382aafbSBarry Smith /* 1220c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1221c1706be6SHong Zhang */ 1222c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1223c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 122431f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 122531f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 122631f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 122731f06eaaSHong Zhang #endif 1228c1706be6SHong Zhang 1229a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 123036763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1231a5057860SBarry Smith 1232a5057860SBarry Smith /* 123366d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1234d382aafbSBarry Smith */ 1235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 123692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1239e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1240e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 124192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 124292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1243efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 124492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 124592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1246d382aafbSBarry Smith 12476a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 12518e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1252d382aafbSBarry Smith 1253d382aafbSBarry Smith /* 1254d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1255d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1256d382aafbSBarry Smith functionality and/or error checking. 1257d382aafbSBarry Smith */ 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1261d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1269a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 12732f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 12782c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 128147340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 12826fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 12836991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 12846991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1286d382aafbSBarry Smith 1287573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1288573b0fb4SBarry Smith 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1292d382aafbSBarry Smith 1293e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1294a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1295a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1296a53986e1SJed Brown 1297d382aafbSBarry Smith /* 1298d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1299d382aafbSBarry Smith */ 1300367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1301570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1302014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 13032414b3c7SJed Brown #else 13042414b3c7SJed Brown #define MPIU_SUM MPI_SUM 13052414b3c7SJed Brown #endif 1306570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1307014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1308014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1309d9822059SBarry Smith #else 1310d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1311d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1312d9822059SBarry Smith #endif 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1314d382aafbSBarry Smith 1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1317eb3f98d2SBarry Smith 131895c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1319d6a4318aSJed Brown 1320639ff905SBarry Smith /* 1321639ff905SBarry Smith Defines PETSc error handling. 1322639ff905SBarry Smith */ 1323639ff905SBarry Smith #include <petscerror.h> 1324d382aafbSBarry Smith 13250700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1326014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1327014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 132981256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 133081256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 133181256985SMatthew G. Knepley 1332d382aafbSBarry Smith 1333d382aafbSBarry Smith /* 1334d382aafbSBarry Smith Routines that get memory usage information from the OS 1335d382aafbSBarry Smith */ 1336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1339b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1340d382aafbSBarry Smith 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1342d382aafbSBarry Smith 1343d382aafbSBarry Smith /* 1344d382aafbSBarry Smith Initialization of PETSc 1345d382aafbSBarry Smith */ 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1356d382aafbSBarry Smith 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1358607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1359d382aafbSBarry Smith 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1364d382aafbSBarry Smith 1365a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1366a50e088cSMatthew G. Knepley 1367a50e088cSMatthew G. Knepley 1368d382aafbSBarry Smith /* 1369d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 13702981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1371d382aafbSBarry Smith */ 1372638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1373638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1374638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1375d382aafbSBarry Smith 1376d382aafbSBarry Smith /* 1377d382aafbSBarry Smith Functions that can act on any PETSc object. 1378d382aafbSBarry Smith */ 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1397bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1398bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14010eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14020eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1404d382aafbSBarry Smith 1405665c2dedSJed Brown #include <petscviewertypes.h> 1406639ff905SBarry Smith #include <petscoptions.h> 1407639ff905SBarry Smith 14080633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14090633abcbSJed Brown 1410639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1411c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1412dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1413639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14140005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14150005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1423685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 14264099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1428b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1431d382aafbSBarry Smith 1432e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 14337aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1434e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1435e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1436e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1437e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1438e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1439e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1440e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1441e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1442e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 144315681b3cSBarry Smith 1444ec7429eaSBarry Smith #else 14457aab2a10SBarry Smith #define PetscSAWsBlock() 0 1446e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1447e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1448e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1449e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1450e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1451e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1452e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1453e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1454e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 145515681b3cSBarry Smith 1456ec7429eaSBarry Smith #endif 1457b90c6cbeSBarry Smith 145882b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 145982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 146082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 14617d5d4d99SBarry Smith 14625fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1463a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 14645fe58b6fSBarry Smith #endif 14657eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1466a64a8e02SBarry Smith 1467140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1468140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1469140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1470140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1471140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1472140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1473d382aafbSBarry Smith 1474d382aafbSBarry Smith /* 1475503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1476d382aafbSBarry Smith link libraries that will be loaded as needed. 1477d382aafbSBarry Smith */ 1478a240a19fSJed Brown 1479a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1480a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1481140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 14821c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 14831c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 148444ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1485140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1486140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1487140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1488d382aafbSBarry Smith 1489014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1497d382aafbSBarry Smith 1498d382aafbSBarry Smith /* 1499d382aafbSBarry Smith Useful utility routines 1500d382aafbSBarry Smith */ 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 15076ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 15086ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1509d382aafbSBarry Smith 151064ac3b0dSPatrick Sanan /*MC 1511ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1512503cfb0cSBarry Smith 1513e28ce29aSPatrick Sanan Notes: 1514e28ce29aSPatrick Sanan This is useful in cases like 1515503cfb0cSBarry Smith $ int *a; 1516ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 15171cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 151864ac3b0dSPatrick Sanan 151964ac3b0dSPatrick Sanan Level: beginner 152064ac3b0dSPatrick Sanan 152164ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 152264ac3b0dSPatrick Sanan M*/ 1523d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1524503cfb0cSBarry Smith 1525d382aafbSBarry Smith /*MC 1526d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1527d382aafbSBarry Smith 1528d382aafbSBarry Smith Synopsis: 1529aaa7dc30SBarry Smith #include <petscsys.h> 1530d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1531d382aafbSBarry Smith 1532eca87e8dSBarry Smith Not Collective 1533eca87e8dSBarry Smith 1534d382aafbSBarry Smith Input Parameters: 1535d382aafbSBarry Smith . format - the usual printf() format string 1536d382aafbSBarry Smith 1537d382aafbSBarry Smith Level: developer 1538d382aafbSBarry Smith 1539d382aafbSBarry Smith Fortran Note: 1540d382aafbSBarry Smith This routine is not supported in Fortran. 1541d382aafbSBarry Smith 1542d382aafbSBarry Smith 1543d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1544d382aafbSBarry Smith M*/ 1545014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1546d382aafbSBarry Smith 1547fcfd50ebSBarry Smith /* 1548fcfd50ebSBarry Smith Defines PETSc profiling. 1549fcfd50ebSBarry Smith */ 15502c8e378dSBarry Smith #include <petsclog.h> 1551fcfd50ebSBarry Smith 1552fcfd50ebSBarry Smith /* 1553fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1554fcfd50ebSBarry Smith */ 1555014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1561014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 15621b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1563fcfd50ebSBarry Smith 1564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1565014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1567d382aafbSBarry Smith 1568d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1569d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1570d781fa04SBarry Smith 1571d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1573016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 157474ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1575d382aafbSBarry Smith #endif 1576d382aafbSBarry Smith 1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 15790ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1584d382aafbSBarry Smith 1585014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1586014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1591b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1592d382aafbSBarry Smith 1593d382aafbSBarry Smith /* 1594d382aafbSBarry Smith For use in debuggers 1595d382aafbSBarry Smith */ 1596014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1597014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1601d382aafbSBarry Smith 1602a663daf8SBarry Smith #include <stddef.h> 1603a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1604d382aafbSBarry Smith #include <stdlib.h> 16056c7e564aSBarry Smith 16064a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1607d382aafbSBarry Smith #include <xmmintrin.h> 1608d382aafbSBarry Smith #endif 1609d382aafbSBarry Smith 1610d382aafbSBarry Smith /*@C 1611580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1612580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1613580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1614580bdb30SBarry Smith 1615580bdb30SBarry Smith Not Collective 1616580bdb30SBarry Smith 1617580bdb30SBarry Smith Input Parameters: 1618580bdb30SBarry Smith + b - pointer to initial memory space 1619580bdb30SBarry Smith . a - pointer to copy space 1620580bdb30SBarry Smith - n - length (in bytes) of space to copy 1621580bdb30SBarry Smith 1622580bdb30SBarry Smith Level: intermediate 1623580bdb30SBarry Smith 1624580bdb30SBarry Smith Note: 1625857a15f1SBarry Smith PetscArraymove() is preferred 1626580bdb30SBarry Smith This routine is analogous to memmove(). 1627580bdb30SBarry Smith 1628580bdb30SBarry Smith Developers Note: This is inlined for performance 1629580bdb30SBarry Smith 1630580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1631580bdb30SBarry Smith PetscArraymove() 1632580bdb30SBarry Smith @*/ 1633580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1634580bdb30SBarry Smith { 1635580bdb30SBarry Smith PetscFunctionBegin; 1636580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1637580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1638580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1639580bdb30SBarry Smith if (a < b) { 1640580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1641580bdb30SBarry Smith else { 1642580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1643580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1644580bdb30SBarry Smith } 1645580bdb30SBarry Smith } else { 1646580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1647580bdb30SBarry Smith else { 1648580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1649580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1650580bdb30SBarry Smith } 1651580bdb30SBarry Smith } 1652580bdb30SBarry Smith #else 1653580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1654580bdb30SBarry Smith #endif 1655580bdb30SBarry Smith PetscFunctionReturn(0); 1656580bdb30SBarry Smith } 1657580bdb30SBarry Smith 1658d382aafbSBarry Smith /*@C 1659d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1660d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1661d382aafbSBarry Smith PetscMemmove() in that case. 1662d382aafbSBarry Smith 1663d382aafbSBarry Smith Not Collective 1664d382aafbSBarry Smith 1665d382aafbSBarry Smith Input Parameters: 1666d382aafbSBarry Smith + b - pointer to initial memory space 1667d382aafbSBarry Smith - n - length (in bytes) of space to copy 1668d382aafbSBarry Smith 1669d382aafbSBarry Smith Output Parameter: 1670d382aafbSBarry Smith . a - pointer to copy space 1671d382aafbSBarry Smith 1672d382aafbSBarry Smith Level: intermediate 1673d382aafbSBarry Smith 1674d382aafbSBarry Smith Compile Option: 1675d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1676d382aafbSBarry Smith for memory copies on double precision values. 1677d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1678d382aafbSBarry Smith for memory copies on double precision values. 1679d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1680d382aafbSBarry Smith for memory copies on double precision values. 1681d382aafbSBarry Smith 1682d382aafbSBarry Smith Note: 1683580bdb30SBarry Smith Prefer PetscArraycpy() 1684d382aafbSBarry Smith This routine is analogous to memcpy(). 16851fd49c25SBarry Smith Not available from Fortran 16861fd49c25SBarry Smith 1687f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1688f5f57ec0SBarry Smith 1689580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1690d382aafbSBarry Smith 1691d382aafbSBarry Smith @*/ 16927087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1693d382aafbSBarry Smith { 1694d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1695c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1696c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1697a7e36092SMatthew G Knepley PetscFunctionBegin; 1698e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1699e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1700a7e36092SMatthew G Knepley #else 1701d382aafbSBarry Smith PetscFunctionBegin; 1702a7e36092SMatthew G Knepley #endif 1703a47a537aSLisandro Dalcin if (a != b && n > 0) { 1704d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1705e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1706d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1707d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1708d382aafbSBarry Smith #endif 1709d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1710c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1711d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1712d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1713c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1714c5df96a5SBarry Smith PetscErrorCode ierr; 1715c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 17168b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1717d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1718d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1719d382aafbSBarry Smith #else 1720d382aafbSBarry Smith size_t i; 1721d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1722d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1723d382aafbSBarry Smith #endif 1724d382aafbSBarry Smith } else { 1725d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1726d382aafbSBarry Smith } 1727d382aafbSBarry Smith #else 1728d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1729d382aafbSBarry Smith #endif 1730d382aafbSBarry Smith } 1731d382aafbSBarry Smith PetscFunctionReturn(0); 1732d382aafbSBarry Smith } 1733d382aafbSBarry Smith 1734d382aafbSBarry Smith /*@C 1735d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1736d382aafbSBarry Smith 1737d382aafbSBarry Smith Not Collective 1738d382aafbSBarry Smith 1739d382aafbSBarry Smith Input Parameters: 1740d382aafbSBarry Smith + a - pointer to beginning memory location 1741d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1742d382aafbSBarry Smith 1743d382aafbSBarry Smith Level: intermediate 1744d382aafbSBarry Smith 1745d382aafbSBarry Smith Compile Option: 1746d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1747d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1748d382aafbSBarry Smith 17491fd49c25SBarry Smith Not available from Fortran 1750857a15f1SBarry Smith Prefer PetscArrayzero() 17511fd49c25SBarry Smith 1752503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1753503cfb0cSBarry Smith 1754580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1755d382aafbSBarry Smith @*/ 17567087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1757d382aafbSBarry Smith { 1758d382aafbSBarry Smith if (n > 0) { 1759d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1760e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1761d382aafbSBarry Smith #endif 1762d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1763d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1764d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1765d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1766d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1767d382aafbSBarry Smith } else { 1768d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1769d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1770d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1771d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1772d382aafbSBarry Smith } else { 1773d382aafbSBarry Smith #endif 1774d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1775d382aafbSBarry Smith bzero((char *)a,n); 1776d382aafbSBarry Smith #else 1777d382aafbSBarry Smith memset((char*)a,0,n); 1778d382aafbSBarry Smith #endif 1779d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1780d382aafbSBarry Smith } 1781d382aafbSBarry Smith #endif 1782d382aafbSBarry Smith } 1783d382aafbSBarry Smith return 0; 1784d382aafbSBarry Smith } 1785d382aafbSBarry Smith 1786d382aafbSBarry Smith /*MC 1787580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1788580bdb30SBarry Smith 1789580bdb30SBarry Smith Synopsis: 1790580bdb30SBarry Smith #include <petscsys.h> 1791580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1792580bdb30SBarry Smith 1793580bdb30SBarry Smith Not Collective 1794580bdb30SBarry Smith 1795580bdb30SBarry Smith Input Parameters: 1796580bdb30SBarry Smith + str1 - First array 1797580bdb30SBarry Smith . str2 - Second array 1798580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1799580bdb30SBarry Smith 1800580bdb30SBarry Smith Output Parameters: 1801580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1802580bdb30SBarry Smith 1803580bdb30SBarry Smith Level: intermediate 1804580bdb30SBarry Smith 1805580bdb30SBarry Smith Note: 1806857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1807580bdb30SBarry Smith The arrays must be of the same type 1808580bdb30SBarry Smith 1809580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1810580bdb30SBarry Smith PetscArraymove() 1811580bdb30SBarry Smith M*/ 18129e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1813580bdb30SBarry Smith 18148f8f2f0dSBarry Smith /*MC 1815580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1816580bdb30SBarry Smith do not overlap 1817580bdb30SBarry Smith 1818580bdb30SBarry Smith Synopsis: 1819580bdb30SBarry Smith #include <petscsys.h> 1820580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1821580bdb30SBarry Smith 1822580bdb30SBarry Smith Not Collective 1823580bdb30SBarry Smith 1824580bdb30SBarry Smith Input Parameters: 1825580bdb30SBarry Smith + str1 - First array 1826580bdb30SBarry Smith . str2 - Second array 1827580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1828580bdb30SBarry Smith 1829580bdb30SBarry Smith Level: intermediate 1830580bdb30SBarry Smith 1831580bdb30SBarry Smith Note: 1832857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1833580bdb30SBarry Smith The arrays must be of the same type 1834580bdb30SBarry Smith 1835580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1836580bdb30SBarry Smith M*/ 18379e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1838580bdb30SBarry Smith 18398f8f2f0dSBarry Smith /*MC 1840580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1841580bdb30SBarry Smith 1842580bdb30SBarry Smith Synopsis: 1843580bdb30SBarry Smith #include <petscsys.h> 1844580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1845580bdb30SBarry Smith 1846580bdb30SBarry Smith Not Collective 1847580bdb30SBarry Smith 1848580bdb30SBarry Smith Input Parameters: 1849de25709eSStefano Zampini + str1 - First array (destination) 1850de25709eSStefano Zampini . str2 - Second array (source) 1851580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1852580bdb30SBarry Smith 1853580bdb30SBarry Smith Level: intermediate 1854580bdb30SBarry Smith 1855580bdb30SBarry Smith Note: 1856857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1857580bdb30SBarry Smith The arrays must be of the same type 1858580bdb30SBarry Smith 1859580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1860580bdb30SBarry Smith M*/ 18619e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1862580bdb30SBarry Smith 18638f8f2f0dSBarry Smith /*MC 1864580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1865580bdb30SBarry Smith 1866580bdb30SBarry Smith Synopsis: 1867580bdb30SBarry Smith #include <petscsys.h> 1868580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1869580bdb30SBarry Smith 1870580bdb30SBarry Smith Not Collective 1871580bdb30SBarry Smith 1872580bdb30SBarry Smith Input Parameters: 1873580bdb30SBarry Smith + str1 - array 1874580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1875580bdb30SBarry Smith 1876580bdb30SBarry Smith Level: intermediate 1877580bdb30SBarry Smith 1878580bdb30SBarry Smith Note: 1879857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1880580bdb30SBarry Smith 1881580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1882580bdb30SBarry Smith M*/ 18839e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1884580bdb30SBarry Smith 1885d382aafbSBarry Smith /*MC 1886d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1887d382aafbSBarry Smith 1888eca87e8dSBarry Smith Synopsis: 1889aaa7dc30SBarry Smith #include <petscsys.h> 1890eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1891eca87e8dSBarry Smith 1892d382aafbSBarry Smith Not Collective 1893d382aafbSBarry Smith 1894d382aafbSBarry Smith Input Parameters: 1895d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1896d382aafbSBarry Smith . n - number of elements to fetch 1897d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 189850d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1899d382aafbSBarry Smith 1900d382aafbSBarry Smith Level: developer 1901d382aafbSBarry Smith 1902d382aafbSBarry Smith Notes: 1903d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1904d382aafbSBarry Smith 190550d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 190650d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 190750d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 190863cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 190963cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 191063cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1911d382aafbSBarry Smith 1912d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1913d382aafbSBarry Smith address). 1914d382aafbSBarry Smith 1915d382aafbSBarry Smith M*/ 1916d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1917d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1918d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1919d382aafbSBarry Smith } while (0) 1920d382aafbSBarry Smith 1921d382aafbSBarry Smith /* 1922d382aafbSBarry Smith Determine if some of the kernel computation routines use 1923d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1924d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1925d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1926e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1927d382aafbSBarry Smith */ 1928d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1929d382aafbSBarry Smith 1930d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1931d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1932d382aafbSBarry Smith #endif 1933d382aafbSBarry Smith 19345a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19355a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1936d382aafbSBarry Smith #endif 1937d382aafbSBarry Smith 1938d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1939d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1940d382aafbSBarry Smith #endif 1941d382aafbSBarry Smith 1942d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1943d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1944d382aafbSBarry Smith #endif 1945d382aafbSBarry Smith 1946d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1947d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1948d382aafbSBarry Smith #endif 1949d382aafbSBarry Smith 1950d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1951d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1952d382aafbSBarry Smith #endif 1953d382aafbSBarry Smith 1954d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1955d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1956d382aafbSBarry Smith #endif 1957d382aafbSBarry Smith 1958d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1959d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1960d382aafbSBarry Smith #endif 1961d382aafbSBarry Smith 1962d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1963d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1964d382aafbSBarry Smith #endif 1965d382aafbSBarry Smith 1966d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1967d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1968d382aafbSBarry Smith #endif 1969d382aafbSBarry Smith 1970d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1971d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1972d382aafbSBarry Smith #endif 1973d382aafbSBarry Smith 1974d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1975d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1976d382aafbSBarry Smith #endif 1977d382aafbSBarry Smith 1978d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1979d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1980d382aafbSBarry Smith #endif 1981d382aafbSBarry Smith 1982d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1983d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1984d382aafbSBarry Smith #endif 1985d382aafbSBarry Smith 1986d382aafbSBarry Smith #endif 1987d382aafbSBarry Smith 1988d382aafbSBarry Smith /* 1989d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1990d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1991d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1992d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1993d382aafbSBarry Smith ugly extern "C" {} wrappers. 1994d382aafbSBarry Smith */ 1995d382aafbSBarry Smith #if defined(__cplusplus) 1996d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 1997d382aafbSBarry Smith # define EXTERN_C_END } 1998d382aafbSBarry Smith #else 1999d382aafbSBarry Smith # define EXTERN_C_BEGIN 2000d382aafbSBarry Smith # define EXTERN_C_END 2001d382aafbSBarry Smith #endif 2002d382aafbSBarry Smith 2003d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2004d382aafbSBarry Smith 2005d382aafbSBarry Smith /*MC 2006d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2007d382aafbSBarry Smith communication 2008d382aafbSBarry Smith 2009d382aafbSBarry Smith Level: beginner 2010d382aafbSBarry Smith 2011d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2012d382aafbSBarry Smith 2013d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2014d382aafbSBarry Smith M*/ 2015d382aafbSBarry Smith 2016d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2017014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2018014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2019c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2020c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2021c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2022c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2023d382aafbSBarry Smith #endif 2024d382aafbSBarry Smith 2025d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2026d382aafbSBarry Smith 2027d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2028d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2029d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2030d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2031d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2032d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2033d382aafbSBarry Smith 203461b0d812SBarry Smith /*@C 2035c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2036c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2037c73702f5SBarry Smith 2038c73702f5SBarry Smith Not Collective 2039c73702f5SBarry Smith 2040c73702f5SBarry Smith Input Parameter: 2041c73702f5SBarry Smith . a - the PetscInt64 value 2042c73702f5SBarry Smith 2043c73702f5SBarry Smith Output Parameter: 2044c73702f5SBarry Smith . b - the resulting PetscInt value 2045c73702f5SBarry Smith 2046c73702f5SBarry Smith Level: advanced 2047c73702f5SBarry Smith 2048c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2049c73702f5SBarry Smith 2050c73702f5SBarry Smith Not available from Fortran 2051c73702f5SBarry Smith 2052c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast() 2053c73702f5SBarry Smith @*/ 2054c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2055c73702f5SBarry Smith { 2056c73702f5SBarry Smith PetscFunctionBegin; 2057c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2058c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2059c73702f5SBarry Smith #endif 2060c73702f5SBarry Smith *b = (PetscInt)(a); 2061c73702f5SBarry Smith PetscFunctionReturn(0); 2062c73702f5SBarry Smith } 2063c73702f5SBarry Smith 2064c73702f5SBarry Smith /*@C 206561b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 206661b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 206761b0d812SBarry Smith 206861b0d812SBarry Smith Not Collective 206961b0d812SBarry Smith 207061b0d812SBarry Smith Input Parameter: 207161b0d812SBarry Smith . a - the PetscInt value 207261b0d812SBarry Smith 207361b0d812SBarry Smith Output Parameter: 207461b0d812SBarry Smith . b - the resulting PetscBLASInt value 207561b0d812SBarry Smith 207661b0d812SBarry Smith Level: advanced 207761b0d812SBarry Smith 20781fd49c25SBarry Smith Not available from Fortran 20791fd49c25SBarry Smith 2080c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 208161b0d812SBarry Smith @*/ 2082c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2083c5df96a5SBarry Smith { 2084c5df96a5SBarry Smith PetscFunctionBegin; 2085c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 208673f49a0bSSatish Balay *b = 0; 2087c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2088c5df96a5SBarry Smith #endif 2089c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2090c5df96a5SBarry Smith PetscFunctionReturn(0); 2091c5df96a5SBarry Smith } 2092c5df96a5SBarry Smith 209361b0d812SBarry Smith /*@C 209461b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 209561b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 209661b0d812SBarry Smith 209761b0d812SBarry Smith Not Collective 209861b0d812SBarry Smith 209961b0d812SBarry Smith Input Parameter: 210061b0d812SBarry Smith . a - the PetscInt value 210161b0d812SBarry Smith 210261b0d812SBarry Smith Output Parameter: 210361b0d812SBarry Smith . b - the resulting PetscMPIInt value 210461b0d812SBarry Smith 210561b0d812SBarry Smith Level: advanced 210661b0d812SBarry Smith 21071fd49c25SBarry Smith Not available from Fortran 21081fd49c25SBarry Smith 2109c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 211061b0d812SBarry Smith @*/ 21114dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 21124dc2109aSBarry Smith { 21134dc2109aSBarry Smith PetscFunctionBegin; 21144dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 211573f49a0bSSatish Balay *b = 0; 21164dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 21174dc2109aSBarry Smith #endif 2118c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21194dc2109aSBarry Smith PetscFunctionReturn(0); 21204dc2109aSBarry Smith } 21214dc2109aSBarry Smith 2122bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 21232f18eb33SBarry Smith 21242f18eb33SBarry Smith /*@C 21252f18eb33SBarry Smith 21262f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 21272f18eb33SBarry Smith 21282f18eb33SBarry Smith Not Collective 21292f18eb33SBarry Smith 21302f18eb33SBarry Smith Input Parameter: 21312f18eb33SBarry Smith + a - the PetscReal value 21322f18eb33SBarry Smith - b - the second value 21332f18eb33SBarry Smith 2134390e1bf2SBarry Smith Returns: 2135390e1bf2SBarry Smith the result as a PetscInt value 21362f18eb33SBarry Smith 2137bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21382f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 21392f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21402f18eb33SBarry Smith 2141e28ce29aSPatrick Sanan Developers Note: 2142e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21432f18eb33SBarry Smith 21442f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21452f18eb33SBarry Smith 21461fd49c25SBarry Smith Not available from Fortran 21471fd49c25SBarry Smith 21482f18eb33SBarry Smith Level: advanced 21492f18eb33SBarry Smith 2150390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 21512f18eb33SBarry Smith @*/ 21522f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 21532f18eb33SBarry Smith { 2154bafee8b4SSatish Balay PetscInt64 r; 21552f18eb33SBarry Smith 2156bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 21572f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21582f18eb33SBarry Smith return (PetscInt) r; 21592f18eb33SBarry Smith } 21602f18eb33SBarry Smith 21612f18eb33SBarry Smith /*@C 21622f18eb33SBarry Smith 21632f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 21642f18eb33SBarry Smith 21652f18eb33SBarry Smith Not Collective 21662f18eb33SBarry Smith 21672f18eb33SBarry Smith Input Parameter: 21682f18eb33SBarry Smith + a - the PetscInt value 21692f18eb33SBarry Smith - b - the second value 21702f18eb33SBarry Smith 2171390e1bf2SBarry Smith Returns: 2172390e1bf2SBarry Smith the result as a PetscInt value 21732f18eb33SBarry Smith 2174bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21752f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 21762f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21772f18eb33SBarry Smith 21781fd49c25SBarry Smith Not available from Fortran 21791fd49c25SBarry Smith 21802f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21812f18eb33SBarry Smith 21822f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21832f18eb33SBarry Smith 21842f18eb33SBarry Smith Level: advanced 21852f18eb33SBarry Smith 2186390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 21872f18eb33SBarry Smith @*/ 21882f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 21892f18eb33SBarry Smith { 2190bafee8b4SSatish Balay PetscInt64 r; 21912f18eb33SBarry Smith 2192bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 21932f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21942f18eb33SBarry Smith return (PetscInt) r; 21952f18eb33SBarry Smith } 21962f18eb33SBarry Smith 2197f91af8c7SBarry Smith /*@C 2198f91af8c7SBarry Smith 2199f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2200f91af8c7SBarry Smith 2201f91af8c7SBarry Smith Not Collective 2202f91af8c7SBarry Smith 2203f91af8c7SBarry Smith Input Parameter: 2204f91af8c7SBarry Smith + a - the PetscInt value 2205f91af8c7SBarry Smith - b - the second value 2206f91af8c7SBarry Smith 2207390e1bf2SBarry Smith Returns: 2208390e1bf2SBarry Smith the result as a PetscInt value 2209f91af8c7SBarry Smith 2210bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2211f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2212f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2213f91af8c7SBarry Smith 2214f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2215f91af8c7SBarry Smith 2216f5f57ec0SBarry Smith Not available from Fortran 2217f5f57ec0SBarry Smith 2218f91af8c7SBarry Smith Level: advanced 2219f91af8c7SBarry Smith 2220390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2221f91af8c7SBarry Smith @*/ 2222f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2223f91af8c7SBarry Smith { 2224bafee8b4SSatish Balay PetscInt64 r; 2225f91af8c7SBarry Smith 2226bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2227f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2228f91af8c7SBarry Smith return (PetscInt) r; 2229f91af8c7SBarry Smith } 2230f91af8c7SBarry Smith 22312f18eb33SBarry Smith /*@C 22322f18eb33SBarry Smith 22332f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 22342f18eb33SBarry Smith 22352f18eb33SBarry Smith Not Collective 22362f18eb33SBarry Smith 22372f18eb33SBarry Smith Input Parameter: 22382f18eb33SBarry Smith + a - the PetscInt value 22392f18eb33SBarry Smith - b - the second value 22402f18eb33SBarry Smith 22412f18eb33SBarry Smith Output Parameter:ma 2242390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 22432f18eb33SBarry Smith 2244bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 22452f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 22462f18eb33SBarry Smith 2247f5f57ec0SBarry Smith Not available from Fortran 2248f5f57ec0SBarry Smith 2249220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 22502f18eb33SBarry Smith 22512f18eb33SBarry Smith Level: advanced 22522f18eb33SBarry Smith 2253220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 22542f18eb33SBarry Smith @*/ 22552f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 22562f18eb33SBarry Smith { 2257bafee8b4SSatish Balay PetscInt64 r; 22582f18eb33SBarry Smith 22592f18eb33SBarry Smith PetscFunctionBegin; 2260bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22612f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22622f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 22632f18eb33SBarry Smith #endif 2264f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2265f91af8c7SBarry Smith PetscFunctionReturn(0); 2266f91af8c7SBarry Smith } 2267f91af8c7SBarry Smith 2268f91af8c7SBarry Smith /*@C 2269f91af8c7SBarry Smith 2270fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2271f91af8c7SBarry Smith 2272f91af8c7SBarry Smith Not Collective 2273f91af8c7SBarry Smith 2274f91af8c7SBarry Smith Input Parameter: 2275f91af8c7SBarry Smith + a - the PetscInt value 2276f91af8c7SBarry Smith - b - the second value 2277f91af8c7SBarry Smith 2278f91af8c7SBarry Smith Output Parameter:ma 2279390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2280f91af8c7SBarry Smith 2281bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2282f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2283f91af8c7SBarry Smith 2284f5f57ec0SBarry Smith Not available from Fortran 2285f5f57ec0SBarry Smith 2286f91af8c7SBarry Smith Level: advanced 2287f91af8c7SBarry Smith 2288390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2289f91af8c7SBarry Smith @*/ 2290f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2291f91af8c7SBarry Smith { 2292bafee8b4SSatish Balay PetscInt64 r; 2293f91af8c7SBarry Smith 2294f91af8c7SBarry Smith PetscFunctionBegin; 2295bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2296f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2297f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2298f91af8c7SBarry Smith #endif 2299f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 23002f18eb33SBarry Smith PetscFunctionReturn(0); 23012f18eb33SBarry Smith } 2302c5df96a5SBarry Smith 2303d382aafbSBarry Smith /* 23042981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2305d382aafbSBarry Smith */ 2306d382aafbSBarry Smith #if defined(hz) 2307d382aafbSBarry Smith # undef hz 2308d382aafbSBarry Smith #endif 2309d382aafbSBarry Smith 231015a5570dSLisandro Dalcin #include <limits.h> 231115a5570dSLisandro Dalcin 231215a5570dSLisandro Dalcin /* The number of bits in a byte */ 231315a5570dSLisandro Dalcin 231415a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 231515a5570dSLisandro Dalcin 2316d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2317d382aafbSBarry Smith 2318d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2319d382aafbSBarry Smith # include <sys/param.h> 2320d382aafbSBarry Smith #endif 2321d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2322d382aafbSBarry Smith # include <sys/types.h> 2323d382aafbSBarry Smith #endif 2324d382aafbSBarry Smith #if defined(MAXPATHLEN) 2325d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2326d382aafbSBarry Smith #elif defined(MAX_PATH) 2327d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2328d382aafbSBarry Smith #elif defined(_MAX_PATH) 2329d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2330d382aafbSBarry Smith #else 2331d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2332d382aafbSBarry Smith #endif 2333d382aafbSBarry Smith 2334d382aafbSBarry Smith /*MC 2335d382aafbSBarry Smith 233666d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 233766d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 233866d79e26SBarry Smith 233966d79e26SBarry Smith 234066d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 234166d79e26SBarry Smith 234266d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 234366d79e26SBarry Smith 234466d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 234566d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 234666d79e26SBarry Smith 234766d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 234866d79e26SBarry Smith 234966d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 235066d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 235166d79e26SBarry Smith version number (x.y.z). 235266d79e26SBarry Smith 235366d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 235466d79e26SBarry Smith 235566d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 235666d79e26SBarry Smith 235766d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 235866d79e26SBarry Smith 235966d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 236066d79e26SBarry Smith 236166d79e26SBarry Smith Level: intermediate 236266d79e26SBarry Smith 236366d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 236466d79e26SBarry Smith 236566d79e26SBarry Smith M*/ 236666d79e26SBarry Smith 236766d79e26SBarry Smith /*MC 236866d79e26SBarry Smith 23691b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 23701b266c99SBarry Smith of every function and module definition you need something like 2371d382aafbSBarry Smith 2372d382aafbSBarry Smith $ 2373af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 23740f665fc7SPatrick Sanan $ use petscXXX 23751b266c99SBarry Smith 2376692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 23771b266c99SBarry Smith 2378d382aafbSBarry Smith $ XXX variablename 23791b266c99SBarry Smith $ type(tXXX) variablename 23801b266c99SBarry Smith 2381692afcd8SPatrick Sanan For example, 23821b266c99SBarry Smith 2383bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 23841b266c99SBarry Smith $ use petscvec 2385d382aafbSBarry Smith $ 2386692afcd8SPatrick Sanan $ Vec b 2387692afcd8SPatrick Sanan $ type(tVec) x 2388d382aafbSBarry Smith 2389d382aafbSBarry Smith Level: beginner 2390d382aafbSBarry Smith 2391d382aafbSBarry Smith M*/ 2392d382aafbSBarry Smith 2393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 239927710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24005f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2401d382aafbSBarry Smith 24026a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24036a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24046a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2406ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 240722ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2409f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 241060e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2411d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 24156c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 241617d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 241717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 24195569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 242117df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 242339f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2425745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 242639f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 24306c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 24316c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2432e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2433d382aafbSBarry Smith 2434ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2435ce605777SToby Isaac 2436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2438d382aafbSBarry Smith 243976bdecfbSBarry Smith /*J 2440d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2441d382aafbSBarry Smith 2442d382aafbSBarry Smith Level: beginner 2443d382aafbSBarry Smith 2444e28ce29aSPatrick Sanan Notes: 2445e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 244625ccb61fSToby Isaac with the option --download-sprng or --download-random123 2447d382aafbSBarry Smith 24488f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 244976bdecfbSBarry Smith J*/ 245019fd82e9SBarry Smith typedef const char* PetscRandomType; 2451d382aafbSBarry Smith #define PETSCRAND "rand" 2452d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2453d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2454c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 245525ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2456d382aafbSBarry Smith 2457d382aafbSBarry Smith /* Logging support */ 2458014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2459d382aafbSBarry Smith 2460607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2461d382aafbSBarry Smith 2462d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2463140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2464d382aafbSBarry Smith 2465bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 246619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 246819fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2469fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2471d382aafbSBarry Smith 2472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2481d382aafbSBarry Smith 2482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 248997540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24908a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 249197540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2492d382aafbSBarry Smith 249330815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 249430815ce0SLisandro Dalcin 24959860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 24969860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2497f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2498f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2506c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2507e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2508c891a504SStefano Zampini #endif 2509d382aafbSBarry Smith 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2513d382aafbSBarry Smith 2514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2520d382aafbSBarry Smith 2521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2526cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2527cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2528d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2529d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2530d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2531d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 25326afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 25336afbe7ddSJed Brown MPI_Request**,MPI_Request**, 25346afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 25356afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 25366afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2537d382aafbSBarry Smith 25386145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 25396145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 25406145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 25416145cd65SJed Brown 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2543d382aafbSBarry Smith 2544ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2545ce94432eSBarry Smith 254645487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 254745487dadSJed Brown 2548d382aafbSBarry Smith struct _n_PetscSubcomm { 2549d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2550d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2551306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 255245487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 255345487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2554708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 255545487dadSJed Brown PetscSubcommType type; 2556e5acf8a4SHong Zhang char *subcommprefix; 2557d382aafbSBarry Smith }; 2558d382aafbSBarry Smith 2559c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2560306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 256136be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2562014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2563014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2565014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 256665d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2567053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2568f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2569e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2570a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2571a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2572a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2573d382aafbSBarry Smith 25749962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 25759962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 25769962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 25779962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 25789962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 25799962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25809962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 25819962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 25829962606eSBarry Smith 25835e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25845f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 25855f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25865f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25875f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 25885e71baefSBarry Smith 2589a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2590a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2591a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2592a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2593a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2594a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2595a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2596a32e93adSJunchao Zhang 259713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 25980f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 259913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2600137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2601137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2602137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 260313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 260413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 26050f453b92SJed Brown 26065e71baefSBarry Smith 2607471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2608471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2609471ecdacSJed Brown * possible. */ 26106a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2611d382aafbSBarry Smith 26129de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 26139de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 26149de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 26159de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 26169de0f6ecSBarry Smith 2617ace2fbaeSBarry Smith #include <stdarg.h> 2618ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2619ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2620ace2fbaeSBarry Smith 2621268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2622fbfcfee5SBarry Smith 26231f817a21SBarry Smith /*@C 26241f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26251f817a21SBarry Smith 26261f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 26271f817a21SBarry Smith 26281f817a21SBarry Smith Input Parameters: 26291f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 26301f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 26311f817a21SBarry Smith 2632850545d0SSatish Balay Level: intermediate 2633850545d0SSatish Balay 2634f5f57ec0SBarry Smith Not available from Fortran 2635f5f57ec0SBarry Smith 26361f817a21SBarry Smith Options Database: 2637063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 26381f817a21SBarry Smith @*/ 2639dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2640dff31646SBarry Smith { 2641dff31646SBarry Smith size_t len; 2642dff31646SBarry Smith char *vstring; 2643dff31646SBarry Smith PetscErrorCode ierr; 2644dff31646SBarry Smith 26451f817a21SBarry Smith PetscFunctionBegin; 26468d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2647dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 264835005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2649580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2650dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26511f817a21SBarry Smith PetscFunctionReturn(0); 2652dff31646SBarry Smith } 2653dff31646SBarry Smith 2654b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2655fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2656fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2657f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2658fe278a28SBarry Smith 2659f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2660f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2661b967cddfSBarry Smith 26629f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 26639f4d3c52SBarry Smith 266404102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2665763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2666dff31646SBarry Smith 266768e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 26685dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2669d382aafbSBarry Smith 2670b2566f29SBarry Smith 2671b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2672b2566f29SBarry Smith /* 2673b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2674b2566f29SBarry Smith */ 26758f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 267677a5e07dSBarry Smith 267777a5e07dSBarry Smith /*MC 267877a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 267977a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 268077a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 268177a5e07dSBarry Smith 2682d083f849SBarry Smith Collective 268377a5e07dSBarry Smith 268477a5e07dSBarry Smith Synopsis: 268577a5e07dSBarry Smith #include <petscsys.h> 268677a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 268777a5e07dSBarry Smith 268877a5e07dSBarry Smith Input Parameters: 268977a5e07dSBarry Smith + indata - pointer to the input data to be reduced 269077a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 269177a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 269277a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 269377a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 269477a5e07dSBarry Smith 269577a5e07dSBarry Smith Output Parameter: 269677a5e07dSBarry Smith . outdata - the reduced values 269777a5e07dSBarry Smith 2698e28ce29aSPatrick Sanan Notes: 2699e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 270077a5e07dSBarry Smith 270177a5e07dSBarry Smith Level: developer 270277a5e07dSBarry Smith 270377a5e07dSBarry Smith .seealso: MPI_Allreduce() 270477a5e07dSBarry Smith M*/ 2705fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2706b2566f29SBarry Smith #else 2707b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2708b2566f29SBarry Smith #endif 2709b2566f29SBarry Smith 2710b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 27118198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 27128198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 27132f065d89SBarry Smith #endif 27148198064fSBarry Smith 271512801b39SBarry Smith /* 271612801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 271712801b39SBarry Smith */ 27188ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 27198ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 272012801b39SBarry Smith 2721d382aafbSBarry Smith #endif 2722