1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 11d382aafbSBarry Smith in the conf/variables definition of PETSC_INCLUDE 12d382aafbSBarry Smith */ 13d382aafbSBarry Smith #include "petscconf.h" 14d382aafbSBarry Smith #include "petscfix.h" 15d382aafbSBarry Smith 16d382aafbSBarry Smith /* ========================================================================== */ 17d382aafbSBarry Smith /* 18d382aafbSBarry Smith This facilitates using C version of PETSc from C++ and 19e2e64c6bSBarry Smith C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 20d382aafbSBarry Smith */ 21d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 22d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 23d382aafbSBarry Smith #endif 24d382aafbSBarry Smith 25d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 26d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" { 27d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END } 28d382aafbSBarry Smith #else 29d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN 30d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END 31d382aafbSBarry Smith #endif 32d382aafbSBarry Smith /* ========================================================================== */ 33d382aafbSBarry Smith /* 34d382aafbSBarry Smith Current PETSc version number and release date. Also listed in 35d382aafbSBarry Smith Web page 36d382aafbSBarry Smith src/docs/tex/manual/intro.tex, 37d382aafbSBarry Smith src/docs/tex/manual/manual.tex. 38d382aafbSBarry Smith src/docs/website/index.html. 39d382aafbSBarry Smith */ 40d382aafbSBarry Smith #include "petscversion.h" 41301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 42d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1) 43301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \ 44d382aafbSBarry Smith PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 45301d30feSBarry Smith PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE) 46d382aafbSBarry Smith #else 47301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s HG Date: %s", \ 48301d30feSBarry Smith PETSC_VERSION_HG, PETSC_VERSION_DATE_HG) 49d382aafbSBarry Smith #endif 50d382aafbSBarry Smith 51d382aafbSBarry Smith /*MC 52d382aafbSBarry Smith PetscGetVersion - Gets the PETSc version information in a string. 53d382aafbSBarry Smith 54d382aafbSBarry Smith Input Parameter: 55d382aafbSBarry Smith . len - length of the string 56d382aafbSBarry Smith 57d382aafbSBarry Smith Output Parameter: 58d382aafbSBarry Smith . version - version string 59d382aafbSBarry Smith 60d382aafbSBarry Smith Level: developer 61d382aafbSBarry Smith 62d382aafbSBarry Smith Usage: 63d382aafbSBarry Smith char version[256]; 64d382aafbSBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 65d382aafbSBarry Smith 66d382aafbSBarry Smith Fortran Note: 67d382aafbSBarry Smith This routine is not supported in Fortran. 68d382aafbSBarry Smith 69d382aafbSBarry Smith .seealso: PetscGetProgramName() 70d382aafbSBarry Smith 71d382aafbSBarry Smith M*/ 72d382aafbSBarry Smith 73d382aafbSBarry Smith /* ========================================================================== */ 74d382aafbSBarry Smith 75d382aafbSBarry Smith /* 76d382aafbSBarry Smith Currently cannot check formatting for PETSc print statements because we have our 77d382aafbSBarry Smith own format %D and %G 78d382aafbSBarry Smith */ 79d382aafbSBarry Smith #undef PETSC_PRINTF_FORMAT_CHECK 80d382aafbSBarry Smith #define PETSC_PRINTF_FORMAT_CHECK(a,b) 81d382aafbSBarry Smith #undef PETSC_FPRINTF_FORMAT_CHECK 82d382aafbSBarry Smith #define PETSC_FPRINTF_FORMAT_CHECK(a,b) 83d382aafbSBarry Smith 84d382aafbSBarry Smith /* 85e2e64c6bSBarry Smith Fixes for ./configure time choices which impact our interface. Currently only 86d382aafbSBarry Smith calling conventions and extra compiler checking falls under this category. 87d382aafbSBarry Smith */ 88d382aafbSBarry Smith #if !defined(PETSC_STDCALL) 89d382aafbSBarry Smith #define PETSC_STDCALL 90d382aafbSBarry Smith #endif 91d382aafbSBarry Smith #if !defined(PETSC_TEMPLATE) 92d382aafbSBarry Smith #define PETSC_TEMPLATE 93d382aafbSBarry Smith #endif 94d382aafbSBarry Smith #if !defined(PETSC_HAVE_DLL_EXPORT) 95d382aafbSBarry Smith #define PETSC_DLL_EXPORT 96d382aafbSBarry Smith #define PETSC_DLL_IMPORT 97d382aafbSBarry Smith #endif 988738c821SJed Brown #if !defined(PETSCSYS_DLLEXPORT) 998738c821SJed Brown #define PETSCSYS_DLLEXPORT 100d382aafbSBarry Smith #endif 101d382aafbSBarry Smith #if !defined(PETSCVEC_DLLEXPORT) 102d382aafbSBarry Smith #define PETSCVEC_DLLEXPORT 103d382aafbSBarry Smith #endif 104d382aafbSBarry Smith #if !defined(PETSCMAT_DLLEXPORT) 105d382aafbSBarry Smith #define PETSCMAT_DLLEXPORT 106d382aafbSBarry Smith #endif 107d382aafbSBarry Smith #if !defined(PETSCDM_DLLEXPORT) 108d382aafbSBarry Smith #define PETSCDM_DLLEXPORT 109d382aafbSBarry Smith #endif 110d382aafbSBarry Smith #if !defined(PETSCKSP_DLLEXPORT) 111d382aafbSBarry Smith #define PETSCKSP_DLLEXPORT 112d382aafbSBarry Smith #endif 113d382aafbSBarry Smith #if !defined(PETSCSNES_DLLEXPORT) 114d382aafbSBarry Smith #define PETSCSNES_DLLEXPORT 115d382aafbSBarry Smith #endif 116d382aafbSBarry Smith #if !defined(PETSCTS_DLLEXPORT) 117d382aafbSBarry Smith #define PETSCTS_DLLEXPORT 118d382aafbSBarry Smith #endif 119d382aafbSBarry Smith #if !defined(PETSCFORTRAN_DLLEXPORT) 120d382aafbSBarry Smith #define PETSCFORTRAN_DLLEXPORT 121d382aafbSBarry Smith #endif 122d382aafbSBarry Smith /* ========================================================================== */ 123d382aafbSBarry Smith 124d382aafbSBarry Smith /* 125d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 126d382aafbSBarry Smith 127d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 128d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 129d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 130d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 131d382aafbSBarry Smith mpicxx.h directly in their code 132d382aafbSBarry Smith */ 133d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 134d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 135d382aafbSBarry Smith #include "mpi.h" 13665013866SBarry Smith 137d382aafbSBarry Smith /* 138d382aafbSBarry Smith Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 139d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 140d382aafbSBarry Smith 141d382aafbSBarry Smith The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense. 142d382aafbSBarry Smith */ 143d382aafbSBarry Smith #include <stdio.h> 144d382aafbSBarry Smith 145d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 146d382aafbSBarry Smith #if !defined(MPIAPI) 147d382aafbSBarry Smith #define MPIAPI 148d382aafbSBarry Smith #endif 149d382aafbSBarry Smith 150b3506946SBarry Smith 151d382aafbSBarry Smith /*MC 152d382aafbSBarry Smith PetscErrorCode - datatype used for return error code from all PETSc functions 153d382aafbSBarry Smith 154d382aafbSBarry Smith Level: beginner 155d382aafbSBarry Smith 156d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 157d382aafbSBarry Smith M*/ 158d382aafbSBarry Smith typedef int PetscErrorCode; 159d382aafbSBarry Smith 160d382aafbSBarry Smith /*MC 161d382aafbSBarry Smith 162503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 163d382aafbSBarry Smith (internal integer in the data structure used for error 164d382aafbSBarry Smith checking). These are all defined by an offset from the lowest 1650700a824SBarry Smith one, PETSC_SMALLEST_CLASSID. 166d382aafbSBarry Smith 167d382aafbSBarry Smith Level: advanced 168d382aafbSBarry Smith 1690700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 170d382aafbSBarry Smith M*/ 1710700a824SBarry Smith typedef int PetscClassId; 172d382aafbSBarry Smith 173d382aafbSBarry Smith /*MC 174c60ec953SBarry Smith PetscLogEvent - id used to identify PETSc or user events which timed portions (blocks of executable) 175c60ec953SBarry Smith code. 176d382aafbSBarry Smith 177d382aafbSBarry Smith Level: intermediate 178d382aafbSBarry Smith 179d382aafbSBarry Smith .seealso: PetscLogEventRegister(), PetscLogEventBegin(), PetscLogEventEnd(), PetscLogStage 180d382aafbSBarry Smith M*/ 181d382aafbSBarry Smith typedef int PetscLogEvent; 182d382aafbSBarry Smith 183d382aafbSBarry Smith /*MC 184c60ec953SBarry Smith PetscLogStage - id used to identify user stages (phases, sections) of runs - for logging 185d382aafbSBarry Smith 186d382aafbSBarry Smith Level: intermediate 187d382aafbSBarry Smith 188d382aafbSBarry Smith .seealso: PetscLogStageRegister(), PetscLogStageBegin(), PetscLogStageEnd(), PetscLogEvent 189d382aafbSBarry Smith M*/ 190d382aafbSBarry Smith typedef int PetscLogStage; 191d382aafbSBarry Smith 192d382aafbSBarry Smith /*MC 193d382aafbSBarry Smith PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 194d382aafbSBarry Smith 195d382aafbSBarry Smith Level: intermediate 196d382aafbSBarry Smith 197d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 1983b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 1993b2a8c54SBarry Smith (except on very rare BLAS/LAPACK implementations that support 64 bit integers). 2003b2a8c54SBarry Smith 2013b2a8c54SBarry Smith PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 2023b2a8c54SBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 2033b2a8c54SBarry Smith 2043b2a8c54SBarry Smith PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2053b2a8c54SBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 206d382aafbSBarry Smith 207d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt 208d382aafbSBarry Smith 209d382aafbSBarry Smith M*/ 210d382aafbSBarry Smith typedef int PetscBLASInt; 211d382aafbSBarry Smith 212d382aafbSBarry Smith /*MC 213d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 214d382aafbSBarry Smith 215d382aafbSBarry Smith Level: intermediate 216d382aafbSBarry Smith 217d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 2183b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 219d382aafbSBarry Smith 2203b2a8c54SBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 221d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 222d382aafbSBarry Smith 2233b2a8c54SBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 224d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 225d382aafbSBarry Smith 226d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 227d382aafbSBarry Smith 228d382aafbSBarry Smith M*/ 229d382aafbSBarry Smith typedef int PetscMPIInt; 230d382aafbSBarry Smith 231d382aafbSBarry Smith /*MC 232d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 233d382aafbSBarry Smith 234d382aafbSBarry Smith Level: intermediate 235d382aafbSBarry Smith 236d382aafbSBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 237d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 238d382aafbSBarry Smith 239d382aafbSBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 240d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 241d382aafbSBarry Smith 242d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 243d382aafbSBarry Smith M*/ 244d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 245d382aafbSBarry Smith 246d382aafbSBarry Smith /*MC 247d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 2483b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 249d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 250d382aafbSBarry Smith 251d382aafbSBarry Smith Level: intermediate 252d382aafbSBarry Smith 253d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 254d382aafbSBarry Smith M*/ 255d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 256d382aafbSBarry Smith typedef long long PetscInt; 257d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT 258d382aafbSBarry Smith #else 259d382aafbSBarry Smith typedef int PetscInt; 260d382aafbSBarry Smith #define MPIU_INT MPI_INT 261d382aafbSBarry Smith #endif 262d382aafbSBarry Smith 263503cfb0cSBarry Smith /* 264503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 265503cfb0cSBarry Smith */ 266d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 267d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT 268d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 269d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG 270d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 271d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT 272d382aafbSBarry Smith #else 273d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 274d382aafbSBarry Smith #endif 275d382aafbSBarry Smith 276d382aafbSBarry Smith 277d382aafbSBarry Smith /* 278d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 279d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 280d382aafbSBarry Smith */ 281d382aafbSBarry Smith 282d382aafbSBarry Smith extern FILE* PETSC_STDOUT; 283d382aafbSBarry Smith 284d382aafbSBarry Smith /* 285d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 286d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 287d382aafbSBarry Smith */ 288d382aafbSBarry Smith extern FILE* PETSC_STDERR; 289d382aafbSBarry Smith 290d382aafbSBarry Smith /* 291d382aafbSBarry Smith PETSC_ZOPEFD is used to send data to the PETSc webpage. It can be used 292d382aafbSBarry Smith in conjunction with PETSC_STDOUT, or by itself. 293d382aafbSBarry Smith */ 294d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD; 295d382aafbSBarry Smith 296d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 297d382aafbSBarry Smith /*MC 298d382aafbSBarry Smith PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of 299d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 300d382aafbSBarry Smith 301d382aafbSBarry Smith Synopsis: 302d382aafbSBarry Smith PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function)) 303d382aafbSBarry Smith 304eca87e8dSBarry Smith Not collective 305eca87e8dSBarry Smith 306d382aafbSBarry Smith Level: developer 307d382aafbSBarry Smith 308d382aafbSBarry Smith Example: 309d382aafbSBarry Smith PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine 310d382aafbSBarry Smith PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r) 311d382aafbSBarry Smith 312d382aafbSBarry Smith .seealso: PetscPolymorphicFunction() 313d382aafbSBarry Smith 314d382aafbSBarry Smith M*/ 315d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;} 316d382aafbSBarry Smith 317d382aafbSBarry Smith /*MC 318d382aafbSBarry Smith PetscPolymorphicScalar - allows defining a C++ polymorphic version of 319d382aafbSBarry Smith a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument 320d382aafbSBarry Smith 321d382aafbSBarry Smith Synopsis: 322d382aafbSBarry Smith PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function)) 323d382aafbSBarry Smith 324eca87e8dSBarry Smith Not collective 325eca87e8dSBarry Smith 326d382aafbSBarry Smith Level: developer 327d382aafbSBarry Smith 328d382aafbSBarry Smith Example: 329d382aafbSBarry Smith PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine 330d382aafbSBarry Smith PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);} 331d382aafbSBarry Smith 332d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine() 333d382aafbSBarry Smith 334d382aafbSBarry Smith M*/ 335d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;} 336d382aafbSBarry Smith 337d382aafbSBarry Smith /*MC 338d382aafbSBarry Smith PetscPolymorphicFunction - allows defining a C++ polymorphic version of 339d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 340d382aafbSBarry Smith and returns the computed value (istead of an error code) 341d382aafbSBarry Smith 342d382aafbSBarry Smith Synopsis: 343d382aafbSBarry Smith PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name) 344d382aafbSBarry Smith 345eca87e8dSBarry Smith Not collective 346eca87e8dSBarry Smith 347d382aafbSBarry Smith Level: developer 348d382aafbSBarry Smith 349d382aafbSBarry Smith Example: 350d382aafbSBarry Smith PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine 351d382aafbSBarry Smith PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;} 352d382aafbSBarry Smith 353d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine() 354d382aafbSBarry Smith 355d382aafbSBarry Smith M*/ 356d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;} 357d382aafbSBarry Smith 358d382aafbSBarry Smith #else 359d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) 360d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) 361d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) 362d382aafbSBarry Smith #endif 363d382aafbSBarry Smith 364d382aafbSBarry Smith /*MC 365d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 366d382aafbSBarry Smith 367d382aafbSBarry Smith Synopsis: 368ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 369d382aafbSBarry Smith 370eca87e8dSBarry Smith Not Collective 371eca87e8dSBarry Smith 372d382aafbSBarry Smith Input Parameters: 373d382aafbSBarry Smith . cond - condition or expression 374d382aafbSBarry Smith 375d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 376d382aafbSBarry Smith branch is unlikely. 377d382aafbSBarry Smith 378d382aafbSBarry Smith Level: advanced 379d382aafbSBarry Smith 380d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 381d382aafbSBarry Smith M*/ 382d382aafbSBarry Smith 383d382aafbSBarry Smith /*MC 384d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 385d382aafbSBarry Smith 386d382aafbSBarry Smith Synopsis: 387ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 388d382aafbSBarry Smith 389eca87e8dSBarry Smith Not Collective 390eca87e8dSBarry Smith 391d382aafbSBarry Smith Input Parameters: 392d382aafbSBarry Smith . cond - condition or expression 393d382aafbSBarry Smith 394d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 395d382aafbSBarry Smith branch is likely. 396d382aafbSBarry Smith 397d382aafbSBarry Smith Level: advanced 398d382aafbSBarry Smith 399d382aafbSBarry Smith .seealso: PetscUnlikely() 400d382aafbSBarry Smith M*/ 401d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 402d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 403d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 404d382aafbSBarry Smith #else 405cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 406cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 407d382aafbSBarry Smith #endif 408d382aafbSBarry Smith 409d382aafbSBarry Smith /* 410d382aafbSBarry Smith Extern indicates a PETSc function defined elsewhere 411d382aafbSBarry Smith */ 412d382aafbSBarry Smith #if !defined(EXTERN) 413d382aafbSBarry Smith #define EXTERN extern 414d382aafbSBarry Smith #endif 415d382aafbSBarry Smith 416d382aafbSBarry Smith /* 417d382aafbSBarry Smith Defines some elementary mathematics functions and constants. 418d382aafbSBarry Smith */ 419d382aafbSBarry Smith #include "petscmath.h" 420d382aafbSBarry Smith 421d382aafbSBarry Smith /* 422d382aafbSBarry Smith Declare extern C stuff after including external header files 423d382aafbSBarry Smith */ 424d382aafbSBarry Smith 425d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN 426d382aafbSBarry Smith 427d382aafbSBarry Smith /* 428d382aafbSBarry Smith Basic PETSc constants 429d382aafbSBarry Smith */ 430d382aafbSBarry Smith 431d382aafbSBarry Smith /*E 432ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 433d382aafbSBarry Smith 434d382aafbSBarry Smith Level: beginner 435d382aafbSBarry Smith 436ace3abfcSBarry Smith Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 43734e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 43834e82e7dSBarry Smith 439d382aafbSBarry Smith E*/ 440ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 441ace3abfcSBarry Smith extern const char *PetscBools[]; 442*70b3c8c7SBarry Smith 443*70b3c8c7SBarry Smith /*E 444*70b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 445*70b3c8c7SBarry Smith 446*70b3c8c7SBarry Smith Level: beginner 447*70b3c8c7SBarry Smith 448*70b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 449*70b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 450*70b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 451*70b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 452*70b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 453*70b3c8c7SBarry Smith 454*70b3c8c7SBarry Smith E*/ 455*70b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 456*70b3c8c7SBarry Smith extern const char *PetscCopyModes[]; 457d382aafbSBarry Smith 458d382aafbSBarry Smith /*MC 459ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 460d382aafbSBarry Smith 461d382aafbSBarry Smith Level: beginner 462d382aafbSBarry Smith 463d382aafbSBarry Smith Note: Zero integer 464d382aafbSBarry Smith 465ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE 466d382aafbSBarry Smith M*/ 467d382aafbSBarry Smith 468d382aafbSBarry Smith /*MC 469ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 470d382aafbSBarry Smith 471d382aafbSBarry Smith Level: beginner 472d382aafbSBarry Smith 473d382aafbSBarry Smith Note: Nonzero integer 474d382aafbSBarry Smith 475ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE 476d382aafbSBarry Smith M*/ 477d382aafbSBarry Smith 478d382aafbSBarry Smith /*MC 479d382aafbSBarry Smith PETSC_YES - Alias for PETSC_TRUE 480d382aafbSBarry Smith 481d382aafbSBarry Smith Level: beginner 482d382aafbSBarry Smith 483d382aafbSBarry Smith Note: Zero integer 484d382aafbSBarry Smith 485ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE, PETSC_FALSE, PETSC_NO 486d382aafbSBarry Smith M*/ 487d382aafbSBarry Smith #define PETSC_YES PETSC_TRUE 488d382aafbSBarry Smith 489d382aafbSBarry Smith /*MC 490d382aafbSBarry Smith PETSC_NO - Alias for PETSC_FALSE 491d382aafbSBarry Smith 492d382aafbSBarry Smith Level: beginner 493d382aafbSBarry Smith 494d382aafbSBarry Smith Note: Nonzero integer 495d382aafbSBarry Smith 496ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE, PETSC_FALSE, PETSC_YES 497d382aafbSBarry Smith M*/ 498d382aafbSBarry Smith #define PETSC_NO PETSC_FALSE 499d382aafbSBarry Smith 500d382aafbSBarry Smith /*MC 501d382aafbSBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer 502d382aafbSBarry Smith 503d382aafbSBarry Smith Level: beginner 504d382aafbSBarry Smith 505d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 506d382aafbSBarry Smith some default 507d382aafbSBarry Smith 508d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 509503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 510d382aafbSBarry Smith 51134e82e7dSBarry Smith Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under 51234e82e7dSBarry Smith different versions of Unix. It is tricky to insure the correct include file is always included. 51334e82e7dSBarry Smith 514d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 515d382aafbSBarry Smith 516d382aafbSBarry Smith M*/ 517d382aafbSBarry Smith #define PETSC_NULL 0 518d382aafbSBarry Smith 519d382aafbSBarry Smith /*MC 520d382aafbSBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 521d382aafbSBarry Smith where you wish PETSc to use the default. 522d382aafbSBarry Smith 523d382aafbSBarry Smith Level: beginner 524d382aafbSBarry Smith 525d382aafbSBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 526d382aafbSBarry Smith 527d382aafbSBarry Smith M*/ 528d382aafbSBarry Smith #define PETSC_DECIDE -1 529d382aafbSBarry Smith 530d382aafbSBarry Smith /*MC 531d382aafbSBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 532d382aafbSBarry Smith where you wish PETSc to use the default. 533d382aafbSBarry Smith 534d382aafbSBarry Smith Level: beginner 535d382aafbSBarry Smith 536d382aafbSBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 537d382aafbSBarry Smith 538d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 539d382aafbSBarry Smith 540d382aafbSBarry Smith M*/ 541d382aafbSBarry Smith #define PETSC_DEFAULT -2 542d382aafbSBarry Smith 543d382aafbSBarry Smith 544d382aafbSBarry Smith /*MC 545d382aafbSBarry Smith PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 546d382aafbSBarry Smith 547d382aafbSBarry Smith Level: beginner 548d382aafbSBarry Smith 549d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 550d382aafbSBarry Smith some default 551d382aafbSBarry Smith 552d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 553d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 554d382aafbSBarry Smith 555d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 556d382aafbSBarry Smith 557d382aafbSBarry Smith M*/ 558d382aafbSBarry Smith #define PETSC_IGNORE PETSC_NULL 559d382aafbSBarry Smith 560d382aafbSBarry Smith /*MC 561d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 562d382aafbSBarry Smith where you wish PETSc to compute the required value. 563d382aafbSBarry Smith 564d382aafbSBarry Smith Level: beginner 565d382aafbSBarry Smith 566d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 567d382aafbSBarry Smith 568d382aafbSBarry Smith M*/ 569d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 570d382aafbSBarry Smith 571d382aafbSBarry Smith /*MC 572d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 573d382aafbSBarry Smith all the processs that PETSc knows about. 574d382aafbSBarry Smith 575d382aafbSBarry Smith Level: beginner 576d382aafbSBarry Smith 577d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 578d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 579d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 580d382aafbSBarry Smith PetscInitialize() 581d382aafbSBarry Smith 582d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 583d382aafbSBarry Smith 584d382aafbSBarry Smith M*/ 585d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD; 586d382aafbSBarry Smith 587d382aafbSBarry Smith /*MC 588503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 589d382aafbSBarry Smith 590d382aafbSBarry Smith Level: beginner 591d382aafbSBarry Smith 592d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 593d382aafbSBarry Smith 594d382aafbSBarry Smith M*/ 595d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 596d382aafbSBarry Smith 597ace3abfcSBarry Smith extern PETSCSYS_DLLEXPORT PetscBool PetscInitializeCalled; 598ace3abfcSBarry Smith extern PETSCSYS_DLLEXPORT PetscBool PetscFinalizeCalled; 599d382aafbSBarry Smith 6008738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 6018738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 6028738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommDestroy(MPI_Comm*); 603d382aafbSBarry Smith 604d382aafbSBarry Smith /*MC 605d382aafbSBarry Smith PetscMalloc - Allocates memory 606d382aafbSBarry Smith 607eca87e8dSBarry Smith Synopsis: 608eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 609eca87e8dSBarry Smith 610eca87e8dSBarry Smith Not Collective 611eca87e8dSBarry Smith 612d382aafbSBarry Smith Input Parameter: 613d382aafbSBarry Smith . m - number of bytes to allocate 614d382aafbSBarry Smith 615d382aafbSBarry Smith Output Parameter: 616d382aafbSBarry Smith . result - memory allocated 617d382aafbSBarry Smith 618d382aafbSBarry Smith Level: beginner 619d382aafbSBarry Smith 620d382aafbSBarry Smith Notes: Memory is always allocated at least double aligned 621d382aafbSBarry Smith 622d382aafbSBarry Smith If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 623d382aafbSBarry Smith properly handle not freeing the null pointer. 624d382aafbSBarry Smith 625d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 626d382aafbSBarry Smith 627d382aafbSBarry Smith Concepts: memory allocation 628d382aafbSBarry Smith 629d382aafbSBarry Smith M*/ 6302714b66aSJed Brown #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 631d382aafbSBarry Smith 632d382aafbSBarry Smith /*MC 633503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 634d382aafbSBarry Smith 635d382aafbSBarry Smith Synopsis: 636d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 637d382aafbSBarry Smith 638eca87e8dSBarry Smith Not Collective 639eca87e8dSBarry Smith 640eca87e8dSBarry Smith Input Parameters: 641eca87e8dSBarry Smith . addr - address to align (any pointer type) 642eca87e8dSBarry Smith 643d382aafbSBarry Smith Level: developer 644d382aafbSBarry Smith 645d382aafbSBarry Smith .seealso: PetscMallocAlign() 646d382aafbSBarry Smith 647d382aafbSBarry Smith Concepts: memory allocation 648d382aafbSBarry Smith M*/ 649d382aafbSBarry Smith #if defined PETSC_UINTPTR_T 650d382aafbSBarry Smith # define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 651d382aafbSBarry Smith #else 652d382aafbSBarry Smith # define PetscAddrAlign(a) (void*)(a) 653d382aafbSBarry Smith #endif 654d382aafbSBarry Smith 655d382aafbSBarry Smith /*MC 656503cfb0cSBarry Smith PetscMalloc2 - Allocates 2 chunks of memory both aligned to PETSC_MEMALIGN 657d382aafbSBarry Smith 658eca87e8dSBarry Smith Synopsis: 659eca87e8dSBarry Smith PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 660eca87e8dSBarry Smith 661eca87e8dSBarry Smith Not Collective 662eca87e8dSBarry Smith 663d382aafbSBarry Smith Input Parameter: 664d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 665d382aafbSBarry Smith . t1 - type of first memory elements 666d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 667d382aafbSBarry Smith - t2 - type of second memory elements 668d382aafbSBarry Smith 669d382aafbSBarry Smith Output Parameter: 670d382aafbSBarry Smith + r1 - memory allocated in first chunk 671d382aafbSBarry Smith - r2 - memory allocated in second chunk 672d382aafbSBarry Smith 673d382aafbSBarry Smith Level: developer 674d382aafbSBarry Smith 675d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 676d382aafbSBarry Smith 677d382aafbSBarry Smith Concepts: memory allocation 678d382aafbSBarry Smith 679d382aafbSBarry Smith M*/ 680d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 681d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 682d382aafbSBarry Smith #else 6833b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \ 684d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 685d382aafbSBarry Smith #endif 686d382aafbSBarry Smith 687d382aafbSBarry Smith /*MC 688503cfb0cSBarry Smith PetscMalloc3 - Allocates 3 chunks of memory all aligned to PETSC_MEMALIGN 689d382aafbSBarry Smith 690eca87e8dSBarry Smith Synopsis: 691eca87e8dSBarry Smith PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 692eca87e8dSBarry Smith 693eca87e8dSBarry Smith Not Collective 694eca87e8dSBarry Smith 695d382aafbSBarry Smith Input Parameter: 696d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 697d382aafbSBarry Smith . t1 - type of first memory elements 698d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 699d382aafbSBarry Smith . t2 - type of second memory elements 700d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 701d382aafbSBarry Smith - t3 - type of third memory elements 702d382aafbSBarry Smith 703d382aafbSBarry Smith Output Parameter: 704d382aafbSBarry Smith + r1 - memory allocated in first chunk 705d382aafbSBarry Smith . r2 - memory allocated in second chunk 706d382aafbSBarry Smith - r3 - memory allocated in third chunk 707d382aafbSBarry Smith 708d382aafbSBarry Smith Level: developer 709d382aafbSBarry Smith 710d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 711d382aafbSBarry Smith 712d382aafbSBarry Smith Concepts: memory allocation 713d382aafbSBarry Smith 714d382aafbSBarry Smith M*/ 715d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 716d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 717d382aafbSBarry Smith #else 7183b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 719d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 720d382aafbSBarry Smith #endif 721d382aafbSBarry Smith 722d382aafbSBarry Smith /*MC 723503cfb0cSBarry Smith PetscMalloc4 - Allocates 4 chunks of memory all aligned to PETSC_MEMALIGN 724d382aafbSBarry Smith 725eca87e8dSBarry Smith Synopsis: 726eca87e8dSBarry Smith PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 727eca87e8dSBarry Smith 728eca87e8dSBarry Smith Not Collective 729eca87e8dSBarry Smith 730d382aafbSBarry Smith Input Parameter: 731d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 732d382aafbSBarry Smith . t1 - type of first memory elements 733d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 734d382aafbSBarry Smith . t2 - type of second memory elements 735d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 736d382aafbSBarry Smith . t3 - type of third memory elements 737d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 738d382aafbSBarry Smith - t4 - type of fourth memory elements 739d382aafbSBarry Smith 740d382aafbSBarry Smith Output Parameter: 741d382aafbSBarry Smith + r1 - memory allocated in first chunk 742d382aafbSBarry Smith . r2 - memory allocated in second chunk 743d382aafbSBarry Smith . r3 - memory allocated in third chunk 744d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 745d382aafbSBarry Smith 746d382aafbSBarry Smith Level: developer 747d382aafbSBarry Smith 748d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 749d382aafbSBarry Smith 750d382aafbSBarry Smith Concepts: memory allocation 751d382aafbSBarry Smith 752d382aafbSBarry Smith M*/ 753d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 754d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 755d382aafbSBarry Smith #else 756d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 7573b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 758d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 759d382aafbSBarry Smith #endif 760d382aafbSBarry Smith 761d382aafbSBarry Smith /*MC 762503cfb0cSBarry Smith PetscMalloc5 - Allocates 5 chunks of memory all aligned to PETSC_MEMALIGN 763d382aafbSBarry Smith 764eca87e8dSBarry Smith Synopsis: 765eca87e8dSBarry Smith PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 766eca87e8dSBarry Smith 767eca87e8dSBarry Smith Not Collective 768eca87e8dSBarry Smith 769d382aafbSBarry Smith Input Parameter: 770d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 771d382aafbSBarry Smith . t1 - type of first memory elements 772d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 773d382aafbSBarry Smith . t2 - type of second memory elements 774d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 775d382aafbSBarry Smith . t3 - type of third memory elements 776d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 777d382aafbSBarry Smith . t4 - type of fourth memory elements 778d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 779d382aafbSBarry Smith - t5 - type of fifth memory elements 780d382aafbSBarry Smith 781d382aafbSBarry Smith Output Parameter: 782d382aafbSBarry Smith + r1 - memory allocated in first chunk 783d382aafbSBarry Smith . r2 - memory allocated in second chunk 784d382aafbSBarry Smith . r3 - memory allocated in third chunk 785d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 786d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 787d382aafbSBarry Smith 788d382aafbSBarry Smith Level: developer 789d382aafbSBarry Smith 790d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 791d382aafbSBarry Smith 792d382aafbSBarry Smith Concepts: memory allocation 793d382aafbSBarry Smith 794d382aafbSBarry Smith M*/ 795d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 796d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 797d382aafbSBarry Smith #else 798d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 7993b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 800d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 801d382aafbSBarry Smith #endif 802d382aafbSBarry Smith 803d382aafbSBarry Smith 804d382aafbSBarry Smith /*MC 805503cfb0cSBarry Smith PetscMalloc6 - Allocates 6 chunks of memory all aligned to PETSC_MEMALIGN 806d382aafbSBarry Smith 807eca87e8dSBarry Smith Synopsis: 808eca87e8dSBarry Smith PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 809eca87e8dSBarry Smith 810eca87e8dSBarry Smith Not Collective 811eca87e8dSBarry Smith 812d382aafbSBarry Smith Input Parameter: 813d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 814d382aafbSBarry Smith . t1 - type of first memory elements 815d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 816d382aafbSBarry Smith . t2 - type of second memory elements 817d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 818d382aafbSBarry Smith . t3 - type of third memory elements 819d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 820d382aafbSBarry Smith . t4 - type of fourth memory elements 821d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 822d382aafbSBarry Smith . t5 - type of fifth memory elements 823d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 824d382aafbSBarry Smith - t6 - type of sixth memory elements 825d382aafbSBarry Smith 826d382aafbSBarry Smith Output Parameter: 827d382aafbSBarry Smith + r1 - memory allocated in first chunk 828d382aafbSBarry Smith . r2 - memory allocated in second chunk 829d382aafbSBarry Smith . r3 - memory allocated in third chunk 830d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 831d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 832d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 833d382aafbSBarry Smith 834d382aafbSBarry Smith Level: developer 835d382aafbSBarry Smith 836d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 837d382aafbSBarry Smith 838d382aafbSBarry Smith Concepts: memory allocation 839d382aafbSBarry Smith 840d382aafbSBarry Smith M*/ 841d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 842d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 843d382aafbSBarry Smith #else 844d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 8453b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 846d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 847d382aafbSBarry Smith #endif 848d382aafbSBarry Smith 849d382aafbSBarry Smith /*MC 850503cfb0cSBarry Smith PetscMalloc7 - Allocates 7 chunks of memory all aligned to PETSC_MEMALIGN 851d382aafbSBarry Smith 852eca87e8dSBarry Smith Synopsis: 853eca87e8dSBarry Smith PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 854eca87e8dSBarry Smith 855eca87e8dSBarry Smith Not Collective 856eca87e8dSBarry Smith 857d382aafbSBarry Smith Input Parameter: 858d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 859d382aafbSBarry Smith . t1 - type of first memory elements 860d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 861d382aafbSBarry Smith . t2 - type of second memory elements 862d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 863d382aafbSBarry Smith . t3 - type of third memory elements 864d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 865d382aafbSBarry Smith . t4 - type of fourth memory elements 866d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 867d382aafbSBarry Smith . t5 - type of fifth memory elements 868d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 869d382aafbSBarry Smith . t6 - type of sixth memory elements 870d382aafbSBarry Smith . m7 - number of elements to allocate in 7th chunk (may be zero) 871d382aafbSBarry Smith - t7 - type of sixth memory elements 872d382aafbSBarry Smith 873d382aafbSBarry Smith Output Parameter: 874d382aafbSBarry Smith + r1 - memory allocated in first chunk 875d382aafbSBarry Smith . r2 - memory allocated in second chunk 876d382aafbSBarry Smith . r3 - memory allocated in third chunk 877d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 878d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 879d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 880eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 881d382aafbSBarry Smith 882d382aafbSBarry Smith Level: developer 883d382aafbSBarry Smith 884d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 885d382aafbSBarry Smith 886d382aafbSBarry Smith Concepts: memory allocation 887d382aafbSBarry Smith 888d382aafbSBarry Smith M*/ 889d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 890d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 891d382aafbSBarry Smith #else 892d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 8933b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 894d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 895d382aafbSBarry Smith #endif 896d382aafbSBarry Smith 897d382aafbSBarry Smith /*MC 898503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 899d382aafbSBarry Smith 900eca87e8dSBarry Smith Synopsis: 901eca87e8dSBarry Smith PetscErrorCode PetscNew(struct type,((type *))result) 902eca87e8dSBarry Smith 903eca87e8dSBarry Smith Not Collective 904eca87e8dSBarry Smith 905d382aafbSBarry Smith Input Parameter: 906d382aafbSBarry Smith . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 907d382aafbSBarry Smith 908d382aafbSBarry Smith Output Parameter: 909d382aafbSBarry Smith . result - memory allocated 910d382aafbSBarry Smith 911d382aafbSBarry Smith Level: beginner 912d382aafbSBarry Smith 913d382aafbSBarry Smith .seealso: PetscFree(), PetscMalloc() 914d382aafbSBarry Smith 915d382aafbSBarry Smith Concepts: memory allocation 916d382aafbSBarry Smith 917d382aafbSBarry Smith M*/ 918d382aafbSBarry Smith #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 919d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 920d382aafbSBarry Smith 921d382aafbSBarry Smith /*MC 922d382aafbSBarry Smith PetscFree - Frees memory 923d382aafbSBarry Smith 924eca87e8dSBarry Smith Synopsis: 925eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 926eca87e8dSBarry Smith 927eca87e8dSBarry Smith Not Collective 928eca87e8dSBarry Smith 929d382aafbSBarry Smith Input Parameter: 930d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 931d382aafbSBarry Smith 932d382aafbSBarry Smith Level: beginner 933d382aafbSBarry Smith 934d382aafbSBarry Smith Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 935d382aafbSBarry Smith 936d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 937d382aafbSBarry Smith 938d382aafbSBarry Smith Concepts: memory allocation 939d382aafbSBarry Smith 940d382aafbSBarry Smith M*/ 94181dabb53SJed Brown #define PetscFree(a) ((a) ? ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || (((a) = 0),0)) : 0) 942d382aafbSBarry Smith 943d382aafbSBarry Smith /*MC 944d382aafbSBarry Smith PetscFreeVoid - Frees memory 945d382aafbSBarry Smith 946d382aafbSBarry Smith Synopsis: 947d382aafbSBarry Smith void PetscFreeVoid(void *memory) 948d382aafbSBarry Smith 949eca87e8dSBarry Smith Not Collective 950eca87e8dSBarry Smith 951eca87e8dSBarry Smith Input Parameter: 952eca87e8dSBarry Smith . memory - memory to free 953eca87e8dSBarry Smith 954d382aafbSBarry Smith Level: beginner 955d382aafbSBarry Smith 956d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 957d382aafbSBarry Smith 958d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 959d382aafbSBarry Smith 960d382aafbSBarry Smith Concepts: memory allocation 961d382aafbSBarry Smith 962d382aafbSBarry Smith M*/ 9632714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0) 964d382aafbSBarry Smith 965d382aafbSBarry Smith 966d382aafbSBarry Smith /*MC 967d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 968d382aafbSBarry Smith 969eca87e8dSBarry Smith Synopsis: 970eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 971eca87e8dSBarry Smith 972eca87e8dSBarry Smith Not Collective 973eca87e8dSBarry Smith 974d382aafbSBarry Smith Input Parameter: 975d382aafbSBarry Smith + memory1 - memory to free 976d382aafbSBarry Smith - memory2 - 2nd memory to free 977d382aafbSBarry Smith 978d382aafbSBarry Smith Level: developer 979d382aafbSBarry Smith 980d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 981d382aafbSBarry Smith 982d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 983d382aafbSBarry Smith 984d382aafbSBarry Smith Concepts: memory allocation 985d382aafbSBarry Smith 986d382aafbSBarry Smith M*/ 987d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 988d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 989d382aafbSBarry Smith #else 99081dabb53SJed Brown #define PetscFree2(m1,m2) ((m2)=0, PetscFree(m1)) 991d382aafbSBarry Smith #endif 992d382aafbSBarry Smith 993d382aafbSBarry Smith /*MC 994d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 995d382aafbSBarry Smith 996eca87e8dSBarry Smith Synopsis: 997eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 998eca87e8dSBarry Smith 999eca87e8dSBarry Smith Not Collective 1000eca87e8dSBarry Smith 1001d382aafbSBarry Smith Input Parameter: 1002d382aafbSBarry Smith + memory1 - memory to free 1003d382aafbSBarry Smith . memory2 - 2nd memory to free 1004d382aafbSBarry Smith - memory3 - 3rd memory to free 1005d382aafbSBarry Smith 1006d382aafbSBarry Smith Level: developer 1007d382aafbSBarry Smith 1008d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 1009d382aafbSBarry Smith 1010d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1011d382aafbSBarry Smith 1012d382aafbSBarry Smith Concepts: memory allocation 1013d382aafbSBarry Smith 1014d382aafbSBarry Smith M*/ 1015d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1016d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1017d382aafbSBarry Smith #else 101881dabb53SJed Brown #define PetscFree3(m1,m2,m3) ((m3)=0,(m2)=0,PetscFree(m1)) 1019d382aafbSBarry Smith #endif 1020d382aafbSBarry Smith 1021d382aafbSBarry Smith /*MC 1022d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1023d382aafbSBarry Smith 1024eca87e8dSBarry Smith Synopsis: 1025eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1026eca87e8dSBarry Smith 1027eca87e8dSBarry Smith Not Collective 1028eca87e8dSBarry Smith 1029d382aafbSBarry Smith Input Parameter: 1030d382aafbSBarry Smith + m1 - memory to free 1031d382aafbSBarry Smith . m2 - 2nd memory to free 1032d382aafbSBarry Smith . m3 - 3rd memory to free 1033d382aafbSBarry Smith - m4 - 4th memory to free 1034d382aafbSBarry Smith 1035d382aafbSBarry Smith Level: developer 1036d382aafbSBarry Smith 1037d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 1038d382aafbSBarry Smith 1039d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1040d382aafbSBarry Smith 1041d382aafbSBarry Smith Concepts: memory allocation 1042d382aafbSBarry Smith 1043d382aafbSBarry Smith M*/ 1044d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1045d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1046d382aafbSBarry Smith #else 104781dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4) ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1048d382aafbSBarry Smith #endif 1049d382aafbSBarry Smith 1050d382aafbSBarry Smith /*MC 1051d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1052d382aafbSBarry Smith 1053eca87e8dSBarry Smith Synopsis: 1054eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1055eca87e8dSBarry Smith 1056eca87e8dSBarry Smith Not Collective 1057eca87e8dSBarry Smith 1058d382aafbSBarry Smith Input Parameter: 1059d382aafbSBarry Smith + m1 - memory to free 1060d382aafbSBarry Smith . m2 - 2nd memory to free 1061d382aafbSBarry Smith . m3 - 3rd memory to free 1062d382aafbSBarry Smith . m4 - 4th memory to free 1063d382aafbSBarry Smith - m5 - 5th memory to free 1064d382aafbSBarry Smith 1065d382aafbSBarry Smith Level: developer 1066d382aafbSBarry Smith 1067d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 1068d382aafbSBarry Smith 1069d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1070d382aafbSBarry Smith 1071d382aafbSBarry Smith Concepts: memory allocation 1072d382aafbSBarry Smith 1073d382aafbSBarry Smith M*/ 1074d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1075d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1076d382aafbSBarry Smith #else 107781dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1078d382aafbSBarry Smith #endif 1079d382aafbSBarry Smith 1080d382aafbSBarry Smith 1081d382aafbSBarry Smith /*MC 1082d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1083d382aafbSBarry Smith 1084eca87e8dSBarry Smith Synopsis: 1085eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1086eca87e8dSBarry Smith 1087eca87e8dSBarry Smith Not Collective 1088eca87e8dSBarry Smith 1089d382aafbSBarry Smith Input Parameter: 1090d382aafbSBarry Smith + m1 - memory to free 1091d382aafbSBarry Smith . m2 - 2nd memory to free 1092d382aafbSBarry Smith . m3 - 3rd memory to free 1093d382aafbSBarry Smith . m4 - 4th memory to free 1094d382aafbSBarry Smith . m5 - 5th memory to free 1095d382aafbSBarry Smith - m6 - 6th memory to free 1096d382aafbSBarry Smith 1097d382aafbSBarry Smith 1098d382aafbSBarry Smith Level: developer 1099d382aafbSBarry Smith 1100d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1101d382aafbSBarry Smith 1102d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1103d382aafbSBarry Smith 1104d382aafbSBarry Smith Concepts: memory allocation 1105d382aafbSBarry Smith 1106d382aafbSBarry Smith M*/ 1107d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1108d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1109d382aafbSBarry Smith #else 111081dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1111d382aafbSBarry Smith #endif 1112d382aafbSBarry Smith 1113d382aafbSBarry Smith /*MC 1114d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1115d382aafbSBarry Smith 1116eca87e8dSBarry Smith Synopsis: 1117eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1118eca87e8dSBarry Smith 1119eca87e8dSBarry Smith Not Collective 1120eca87e8dSBarry Smith 1121d382aafbSBarry Smith Input Parameter: 1122d382aafbSBarry Smith + m1 - memory to free 1123d382aafbSBarry Smith . m2 - 2nd memory to free 1124d382aafbSBarry Smith . m3 - 3rd memory to free 1125d382aafbSBarry Smith . m4 - 4th memory to free 1126d382aafbSBarry Smith . m5 - 5th memory to free 1127d382aafbSBarry Smith . m6 - 6th memory to free 1128d382aafbSBarry Smith - m7 - 7th memory to free 1129d382aafbSBarry Smith 1130d382aafbSBarry Smith 1131d382aafbSBarry Smith Level: developer 1132d382aafbSBarry Smith 1133d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1134d382aafbSBarry Smith 1135d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1136d382aafbSBarry Smith PetscMalloc7() 1137d382aafbSBarry Smith 1138d382aafbSBarry Smith Concepts: memory allocation 1139d382aafbSBarry Smith 1140d382aafbSBarry Smith M*/ 1141d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1142d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1143d382aafbSBarry Smith #else 114481dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1145d382aafbSBarry Smith #endif 1146d382aafbSBarry Smith 11478738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 11488738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 11498738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 11508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocClear(void); 1151d382aafbSBarry Smith 1152d382aafbSBarry Smith /* 1153d382aafbSBarry Smith Routines for tracing memory corruption/bleeding with default PETSc 1154d382aafbSBarry Smith memory allocation 1155d382aafbSBarry Smith */ 11568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDump(FILE *); 11578738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDumpLog(FILE *); 11588738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocGetCurrentUsage(PetscLogDouble *); 11598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocGetMaximumUsage(PetscLogDouble *); 1160ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocDebug(PetscBool ); 11618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocValidate(int,const char[],const char[],const char[]); 11628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMallocSetDumpLog(void); 1163d382aafbSBarry Smith 1164d382aafbSBarry Smith 1165d382aafbSBarry Smith /* 1166d382aafbSBarry Smith Variable type where we stash PETSc object pointers in Fortran. 1167d382aafbSBarry Smith On most machines size(pointer) == sizeof(long) - except windows 1168d382aafbSBarry Smith where its sizeof(long long) 1169d382aafbSBarry Smith */ 1170d382aafbSBarry Smith 1171d382aafbSBarry Smith #if (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG) 1172d382aafbSBarry Smith #define PetscFortranAddr long 1173d382aafbSBarry Smith #elif (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG_LONG) 1174d382aafbSBarry Smith #define PetscFortranAddr long long 1175d382aafbSBarry Smith #else 1176d382aafbSBarry Smith #error "Unknown size for PetscFortranAddr! Send us a bugreport at petsc-maint@mcs.anl.gov" 1177d382aafbSBarry Smith #endif 1178d382aafbSBarry Smith 1179d382aafbSBarry Smith /*E 1180d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1181d382aafbSBarry Smith 1182d382aafbSBarry Smith Level: beginner 1183d382aafbSBarry Smith 1184d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1185d382aafbSBarry Smith 1186d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1187d382aafbSBarry Smith PetscDataTypeGetSize() 1188d382aafbSBarry Smith 1189d382aafbSBarry Smith E*/ 1190d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 1191ace3abfcSBarry Smith PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC_LONG_DOUBLE = 10, PETSC_QD_DD = 11} PetscDataType; 1192d382aafbSBarry Smith extern const char *PetscDataTypes[]; 1193d382aafbSBarry Smith 1194d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1195d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1196d382aafbSBarry Smith #else 1197d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1198d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 1199d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1200d382aafbSBarry Smith #define PETSC_SCALAR PETSC_LONG_DOUBLE 1201d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1202d382aafbSBarry Smith #define PETSC_SCALAR PETSC_INT 1203d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1204d382aafbSBarry Smith #define PETSC_SCALAR PETSC_QD_DD 1205d382aafbSBarry Smith #else 1206d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1207d382aafbSBarry Smith #endif 1208d382aafbSBarry Smith #endif 1209d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1210d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 1211d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1212d382aafbSBarry Smith #define PETSC_REAL PETSC_LONG_DOUBLE 1213d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1214d382aafbSBarry Smith #define PETSC_REAL PETSC_INT 1215d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1216d382aafbSBarry Smith #define PETSC_REAL PETSC_QD_DD 1217d382aafbSBarry Smith #else 1218d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1219d382aafbSBarry Smith #endif 1220d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1221d382aafbSBarry Smith 12228738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 12238738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 12248738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDataTypeGetSize(PetscDataType,size_t*); 1225d382aafbSBarry Smith 1226d382aafbSBarry Smith /* 1227d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1228d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1229d382aafbSBarry Smith functionality and/or error checking. 1230d382aafbSBarry Smith */ 12318738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 12328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemmove(void*,void *,size_t); 1233ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemcmp(const void*,const void*,size_t,PetscBool *); 12348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrlen(const char[],size_t*); 12358738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrToArray(const char[],int*,char ***); 12368738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrToArrayDestroy(int,char **); 1237ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcmp(const char[],const char[],PetscBool *); 1238ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrgrt(const char[],const char[],PetscBool *); 1239ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcasecmp(const char[],const char[],PetscBool *); 1240ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncmp(const char[],const char[],size_t,PetscBool *); 12418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcpy(char[],const char[]); 12428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrcat(char[],const char[]); 12438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncat(char[],const char[],size_t); 12448738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrncpy(char[],const char[],size_t); 12458738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrchr(const char[],char,char *[]); 12468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrtolower(char[]); 12478738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrrchr(const char[],char,char *[]); 12488738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrstr(const char[],const char[],char *[]); 12498738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrrstr(const char[],const char[],char *[]); 12508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrallocpy(const char[],char *[]); 12518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1252d382aafbSBarry Smith 1253d382aafbSBarry Smith /*S 1254d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1255d382aafbSBarry Smith 1256d382aafbSBarry Smith Level: intermediate 1257d382aafbSBarry Smith 1258d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1259d382aafbSBarry Smith S*/ 1260d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1261d382aafbSBarry Smith 12628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenCreate(const char[],const char,PetscToken*); 12638738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenFind(PetscToken,char *[]); 12648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTokenDestroy(PetscToken); 1265d382aafbSBarry Smith 1266d382aafbSBarry Smith /* 1267d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1268d382aafbSBarry Smith */ 12698738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT MPI_Op PetscMaxSum_Op; 1270d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX) 12718738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT MPI_Op MPIU_SUM; 1272d382aafbSBarry Smith #else 1273d382aafbSBarry Smith #define MPIU_SUM MPI_SUM 1274d382aafbSBarry Smith #endif 12758738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1276d382aafbSBarry Smith 1277d382aafbSBarry Smith /*S 1278d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1279d382aafbSBarry Smith 1280d382aafbSBarry Smith Level: beginner 1281d382aafbSBarry Smith 1282d382aafbSBarry Smith Note: This is the base class from which all objects appear. 1283d382aafbSBarry Smith 12841890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1285d382aafbSBarry Smith S*/ 1286d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1287d382aafbSBarry Smith 1288d382aafbSBarry Smith /*S 1289d382aafbSBarry Smith PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1290d382aafbSBarry Smith by string name 1291d382aafbSBarry Smith 1292d382aafbSBarry Smith Level: advanced 1293d382aafbSBarry Smith 1294d382aafbSBarry Smith .seealso: PetscFListAdd(), PetscFListDestroy() 1295d382aafbSBarry Smith S*/ 1296d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList; 1297d382aafbSBarry Smith 1298d382aafbSBarry Smith /*E 1299d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1300d382aafbSBarry Smith 1301d382aafbSBarry Smith Level: beginner 1302d382aafbSBarry Smith 1303d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1304d382aafbSBarry Smith 1305d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1306d382aafbSBarry Smith 1307d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1308d382aafbSBarry Smith 1309d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1310d382aafbSBarry Smith 1311d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1312d382aafbSBarry Smith 1313d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1314d382aafbSBarry Smith E*/ 1315d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1316d382aafbSBarry Smith 1317d382aafbSBarry Smith #include "petscviewer.h" 1318d382aafbSBarry Smith #include "petscoptions.h" 1319d382aafbSBarry Smith 13200700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 13218738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_LARGEST_CLASSID; 13228738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_OBJECT_CLASSID; 13238738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscClassIdRegister(const char[],PetscClassId *); 1324d382aafbSBarry Smith 1325d382aafbSBarry Smith /* 1326d382aafbSBarry Smith Routines that get memory usage information from the OS 1327d382aafbSBarry Smith */ 13288738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryGetCurrentUsage(PetscLogDouble *); 13298738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryGetMaximumUsage(PetscLogDouble *); 13308738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemorySetGetMaximumUsage(void); 13318738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMemoryShowUsage(PetscViewer,const char[]); 1332d382aafbSBarry Smith 1333ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInfoAllow(PetscBool ,const char []); 13348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetTime(PetscLogDouble*); 13358738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetCPUTime(PetscLogDouble*); 13368738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSleep(PetscReal); 1337d382aafbSBarry Smith 1338d382aafbSBarry Smith /* 1339d382aafbSBarry Smith Initialization of PETSc 1340d382aafbSBarry Smith */ 13418738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitialize(int*,char***,const char[],const char[]); 1342d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL)) 13438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitializeNoArguments(void); 1344ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscInitialized(PetscBool *); 1345ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFinalized(PetscBool *); 13468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFinalize(void); 1347d382aafbSBarry Smith EXTERN PetscErrorCode PetscInitializeFortran(void); 13488738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArgs(int*,char ***); 13498738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArguments(char ***); 13508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFreeArguments(char **); 1351d382aafbSBarry Smith 13528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscEnd(void); 13538738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSysInitializePackage(const char[]); 1354d382aafbSBarry Smith 1355d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD; 13568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 13578738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPSpawn(PetscMPIInt); 13588738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPFinalize(void); 13598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 13608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 13618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPFree(MPI_Comm,void*); 13628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenMPMalloc(MPI_Comm,size_t,void**); 1363d382aafbSBarry Smith 13648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonInitialize(const char[],const char[]); 13658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonFinalize(void); 1366e0ab9aedSLisandro Dalcin EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPythonPrintError(void); 1367d382aafbSBarry Smith 1368d382aafbSBarry Smith /* 1369d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 1370d382aafbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be 1371d382aafbSBarry Smith C++. 1372d382aafbSBarry Smith */ 1373d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void); 1374d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void); 1375d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1376d382aafbSBarry Smith 1377d382aafbSBarry Smith /* 1378d382aafbSBarry Smith PetscTryMethod - Queries an object for a method, if it exists then calls it. 1379d382aafbSBarry Smith These are intended to be used only inside PETSc functions. 1380503cfb0cSBarry Smith 1381503cfb0cSBarry Smith Level: developer 1382503cfb0cSBarry Smith 1383503cfb0cSBarry Smith .seealso: PetscUseMethod() 1384d382aafbSBarry Smith */ 1385d382aafbSBarry Smith #define PetscTryMethod(obj,A,B,C) \ 1386d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1387d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1388d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1389d382aafbSBarry Smith } 1390503cfb0cSBarry Smith 1391503cfb0cSBarry Smith /* 1392503cfb0cSBarry Smith PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error. 1393503cfb0cSBarry Smith These are intended to be used only inside PETSc functions. 1394503cfb0cSBarry Smith 1395503cfb0cSBarry Smith Level: developer 1396503cfb0cSBarry Smith 1397503cfb0cSBarry Smith .seealso: PetscTryMethod() 1398503cfb0cSBarry Smith */ 1399d382aafbSBarry Smith #define PetscUseMethod(obj,A,B,C) \ 1400d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1401d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1402d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1403be015529SBarry Smith else SETERRQ1(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \ 1404d382aafbSBarry Smith } 1405503cfb0cSBarry Smith 1406d382aafbSBarry Smith /* 1407d382aafbSBarry Smith Functions that can act on any PETSc object. 1408d382aafbSBarry Smith */ 14098738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCreate(MPI_Comm,PetscObject*); 14108738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCreateGeneric(MPI_Comm, PetscClassId, const char [], PetscObject *); 14118738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDestroy(PetscObject); 14128738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetComm(PetscObject,MPI_Comm *); 14138738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetClassId(PetscObject,PetscClassId *); 14148738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetType(PetscObject,const char []); 14158738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetType(PetscObject,const char *[]); 14168738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetName(PetscObject,const char[]); 14178738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetName(PetscObject,const char*[]); 1418317d6ea6SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]); 14198738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetTabLevel(PetscObject,PetscInt); 14208738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetTabLevel(PetscObject,PetscInt*); 14218738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 14228738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectReference(PetscObject); 14238738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetReference(PetscObject,PetscInt*); 14248738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDereference(PetscObject); 14258738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 14268738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectView(PetscObject,PetscViewer); 14278738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectCompose(PetscObject,const char[],PetscObject); 14288738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectQuery(PetscObject,const char[],PetscObject *); 14298738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 14308738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetFromOptions(PetscObject); 14318738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetUp(PetscObject); 14328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 14338738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*); 14348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectProcessOptionsHandlers(PetscObject); 14358738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectDestroyOptionsHandlers(PetscObject); 1436d382aafbSBarry Smith 1437d382aafbSBarry Smith /*MC 1438d382aafbSBarry Smith PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1439d382aafbSBarry Smith 1440eca87e8dSBarry Smith Synopsis: 1441eca87e8dSBarry Smith PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1442eca87e8dSBarry Smith 1443ad4df100SBarry Smith Logically Collective on PetscObject 1444d382aafbSBarry Smith 1445d382aafbSBarry Smith Input Parameters: 1446d382aafbSBarry Smith + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1447d382aafbSBarry Smith PetscObjectCompose((PetscObject)mat,...); 1448d382aafbSBarry Smith . name - name associated with the child function 1449d382aafbSBarry Smith . fname - name of the function 1450d382aafbSBarry Smith - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1451d382aafbSBarry Smith 1452d382aafbSBarry Smith Level: advanced 1453d382aafbSBarry Smith 1454d382aafbSBarry Smith 1455d382aafbSBarry Smith Notes: 1456d382aafbSBarry Smith To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1457d382aafbSBarry Smith 1458d382aafbSBarry Smith PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1459d382aafbSBarry Smith Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1460d382aafbSBarry Smith 1461d382aafbSBarry Smith The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 146220de1f94SBarry Smith work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading) 1463d382aafbSBarry Smith enabled. 1464d382aafbSBarry Smith 1465d382aafbSBarry Smith Concepts: objects^composing functions 1466d382aafbSBarry Smith Concepts: composing functions 1467d382aafbSBarry Smith Concepts: functions^querying 1468d382aafbSBarry Smith Concepts: objects^querying 1469d382aafbSBarry Smith Concepts: querying objects 1470d382aafbSBarry Smith 1471d382aafbSBarry Smith .seealso: PetscObjectQueryFunction() 1472d382aafbSBarry Smith M*/ 1473d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1474d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1475d382aafbSBarry Smith #else 1476d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1477d382aafbSBarry Smith #endif 1478d382aafbSBarry Smith 14798738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 14808738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectSetOptionsPrefix(PetscObject,const char[]); 14818738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 14828738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 14838738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 14849fb22e1aSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectAMSPublish(PetscObject); 1485c457296dSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectUnPublish(PetscObject); 14868738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectChangeTypeName(PetscObject,const char[]); 14878738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectRegisterDestroy(PetscObject); 14888738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectRegisterDestroyAll(void); 14898738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscObjectName(PetscObject); 1490ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTypeCompare(PetscObject,const char[],PetscBool *); 14918738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRegisterFinalize(PetscErrorCode (*)(void)); 14928738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRegisterFinalizeAll(void); 1493d382aafbSBarry Smith 1494d382aafbSBarry Smith /* 1495d382aafbSBarry Smith Defines PETSc error handling. 1496d382aafbSBarry Smith */ 1497d382aafbSBarry Smith #include "petscerror.h" 1498d382aafbSBarry Smith 1499d382aafbSBarry Smith /*S 1500503cfb0cSBarry Smith PetscOList - Linked list of PETSc objects, each accessable by string name 1501d382aafbSBarry Smith 15021d0fab5eSBarry Smith Level: developer 1503d382aafbSBarry Smith 15041d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 15051d0fab5eSBarry Smith 15061d0fab5eSBarry Smith .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery() 1507d382aafbSBarry Smith S*/ 1508d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList; 1509d382aafbSBarry Smith 15108738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListDestroy(PetscOList); 15118738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListFind(PetscOList,const char[],PetscObject*); 15128738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListReverseFind(PetscOList,PetscObject,char**); 15138738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListAdd(PetscOList *,const char[],PetscObject); 15148738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOListDuplicate(PetscOList,PetscOList *); 1515d382aafbSBarry Smith 1516d382aafbSBarry Smith /* 1517503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1518d382aafbSBarry Smith link libraries that will be loaded as needed. 1519d382aafbSBarry Smith */ 15208738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 15218738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListDestroy(PetscFList*); 15228738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListFind(PetscFList,MPI_Comm,const char[],void (**)(void)); 15238738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1524d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1525d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1526d382aafbSBarry Smith #else 1527d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1528d382aafbSBarry Smith #endif 15298738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListDuplicate(PetscFList,PetscFList *); 15308738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListView(PetscFList,PetscViewer); 15318738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListConcat(const char [],const char [],char []); 15328738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFListGet(PetscFList,char ***,int*); 1533d382aafbSBarry Smith 1534d382aafbSBarry Smith /*S 1535d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1536d382aafbSBarry Smith 1537d382aafbSBarry Smith Level: advanced 1538d382aafbSBarry Smith 153920de1f94SBarry Smith --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries 1540d382aafbSBarry Smith 1541d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1542d382aafbSBarry Smith S*/ 1543d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 15448738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscDLLibrary DLLibrariesLoaded; 15458738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 15468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 15478738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 15488738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryPrintPath(PetscDLLibrary); 1549ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 15508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 15518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryClose(PetscDLLibrary); 15528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1553d382aafbSBarry Smith 1554d382aafbSBarry Smith /* 155505846914SDmitry Karpeev PetscFwk support. Needs to be documented. 155605846914SDmitry Karpeev Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc. 155705846914SDmitry Karpeev */ 155805846914SDmitry Karpeev #include "petscfwk.h" 155905846914SDmitry Karpeev 156005846914SDmitry Karpeev /* 1561d382aafbSBarry Smith Useful utility routines 1562d382aafbSBarry Smith */ 15638738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 15648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 15658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1566d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1)) 1567d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1)) 15688738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1569d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1)) 1570d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1)) 15718738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBarrier(PetscObject); 15728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscMPIDump(FILE*); 1573d382aafbSBarry Smith 1574503cfb0cSBarry Smith /* 1575ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1576503cfb0cSBarry Smith 1577503cfb0cSBarry Smith Notes: This is useful in cases like 1578503cfb0cSBarry Smith $ int *a; 1579ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 1580ace3abfcSBarry Smith where !a does not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1581503cfb0cSBarry Smith */ 1582d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1583503cfb0cSBarry Smith 1584d382aafbSBarry Smith /* 1585d382aafbSBarry Smith Defines basic graphics available from PETSc. 1586d382aafbSBarry Smith */ 1587d382aafbSBarry Smith #include "petscdraw.h" 1588d382aafbSBarry Smith 1589d382aafbSBarry Smith /* 1590d382aafbSBarry Smith Defines the base data structures for all PETSc objects 1591d382aafbSBarry Smith */ 1592d382aafbSBarry Smith #include "private/petscimpl.h" 1593503cfb0cSBarry Smith 1594d382aafbSBarry Smith /* 1595d382aafbSBarry Smith Defines PETSc profiling. 1596d382aafbSBarry Smith */ 1597d382aafbSBarry Smith #include "petsclog.h" 1598d382aafbSBarry Smith 1599d382aafbSBarry Smith /* 1600b3506946SBarry Smith For locking, unlocking and destroying AMS memories associated with PETSc objects. ams.h is included in petscviewer.h 1601d382aafbSBarry Smith */ 1602b3506946SBarry Smith #if defined(PETSC_HAVE_AMS) 1603ace3abfcSBarry Smith extern PetscBool PetscAMSPublishAll; 1604b3506946SBarry Smith #define PetscObjectTakeAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem)) 1605b3506946SBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem)) 1606b3506946SBarry Smith #define PetscObjectDepublish(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1; 1607b3506946SBarry Smith #else 1608d382aafbSBarry Smith #define PetscObjectTakeAccess(obj) 0 1609d382aafbSBarry Smith #define PetscObjectGrantAccess(obj) 0 1610d382aafbSBarry Smith #define PetscObjectDepublish(obj) 0 1611b3506946SBarry Smith #endif 1612d382aafbSBarry Smith 1613d382aafbSBarry Smith /* 1614d382aafbSBarry Smith Simple PETSc parallel IO for ASCII printing 1615d382aafbSBarry Smith */ 16168738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFixFilename(const char[],char[]); 16178738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 16188738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFClose(MPI_Comm,FILE*); 16198738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_PRINTF_FORMAT_CHECK(3,4); 16208738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPrintf(MPI_Comm,const char[],...) PETSC_PRINTF_FORMAT_CHECK(2,3); 16218738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSNPrintf(char*,size_t,const char [],...); 1622d382aafbSBarry Smith 1623d382aafbSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1624d382aafbSBarry Smith #include <stdarg.h> 1625c9a19010SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 16268738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT (*PetscVFPrintf)(FILE*,const char[],va_list); 16278738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscVFPrintfDefault(FILE*,const char[],va_list); 1628d382aafbSBarry Smith 1629d382aafbSBarry Smith /*MC 1630d382aafbSBarry Smith PetscErrorPrintf - Prints error messages. 1631d382aafbSBarry Smith 1632d382aafbSBarry Smith Synopsis: 1633d382aafbSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1634d382aafbSBarry Smith 1635eca87e8dSBarry Smith Not Collective 1636eca87e8dSBarry Smith 1637d382aafbSBarry Smith Input Parameters: 1638d382aafbSBarry Smith . format - the usual printf() format string 1639d382aafbSBarry Smith 1640d382aafbSBarry Smith Options Database Keys: 1641d382aafbSBarry Smith + -error_output_stdout - cause error messages to be printed to stdout instead of the 1642d382aafbSBarry Smith (default) stderr 1643d382aafbSBarry Smith - -error_output_none to turn off all printing of error messages (does not change the way the 1644d382aafbSBarry Smith error is handled.) 1645d382aafbSBarry Smith 1646d382aafbSBarry Smith Notes: Use 1647d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1648d382aafbSBarry Smith $ error is handled.) and 1649d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1650c9a19010SBarry Smith $ of you can use your own function 1651d382aafbSBarry Smith 1652d382aafbSBarry Smith Use 1653d382aafbSBarry Smith PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1654d382aafbSBarry Smith PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1655d382aafbSBarry Smith 1656d382aafbSBarry Smith Use 1657d382aafbSBarry Smith PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1658d382aafbSBarry Smith 1659d382aafbSBarry Smith Level: developer 1660d382aafbSBarry Smith 1661d382aafbSBarry Smith Fortran Note: 1662d382aafbSBarry Smith This routine is not supported in Fortran. 1663d382aafbSBarry Smith 1664d382aafbSBarry Smith Concepts: error messages^printing 1665d382aafbSBarry Smith Concepts: printing^error messages 1666d382aafbSBarry Smith 1667c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf() 1668d382aafbSBarry Smith M*/ 16698738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1670d382aafbSBarry Smith 1671d382aafbSBarry Smith /*MC 1672d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1673d382aafbSBarry Smith 1674d382aafbSBarry Smith Synopsis: 1675d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1676d382aafbSBarry Smith 1677eca87e8dSBarry Smith Not Collective 1678eca87e8dSBarry Smith 1679d382aafbSBarry Smith Input Parameters: 1680d382aafbSBarry Smith . format - the usual printf() format string 1681d382aafbSBarry Smith 1682d382aafbSBarry Smith Level: developer 1683d382aafbSBarry Smith 1684d382aafbSBarry Smith Fortran Note: 1685d382aafbSBarry Smith This routine is not supported in Fortran. 1686d382aafbSBarry Smith 1687d382aafbSBarry Smith Concepts: help messages^printing 1688d382aafbSBarry Smith Concepts: printing^help messages 1689d382aafbSBarry Smith 1690d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1691d382aafbSBarry Smith M*/ 16928738c821SJed Brown EXTERN PETSCSYS_DLLEXPORT PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1693d382aafbSBarry Smith 1694d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1695d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1696d382aafbSBarry Smith EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1697d382aafbSBarry Smith 1698d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 16998738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 17008738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPClose(MPI_Comm,FILE*); 1701d382aafbSBarry Smith #endif 1702d382aafbSBarry Smith 17038738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedPrintf(MPI_Comm,const char[],...) PETSC_PRINTF_FORMAT_CHECK(2,3); 17048738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_PRINTF_FORMAT_CHECK(3,4); 17058738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFlush(MPI_Comm); 17068738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 17078738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 17088738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 17098738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetPetscDir(const char*[]); 1710d382aafbSBarry Smith 17118738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1712d382aafbSBarry Smith 1713d382aafbSBarry Smith /*S 1714d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1715d382aafbSBarry Smith 1716d382aafbSBarry Smith Level: advanced 1717d382aafbSBarry Smith 1718d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1719d382aafbSBarry Smith S*/ 17208738c821SJed Brown extern PetscClassId PETSCSYS_DLLEXPORT PETSC_CONTAINER_CLASSID; 1721d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 17228738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerGetPointer(PetscContainer,void **); 17238738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerSetPointer(PetscContainer,void *); 17248738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerDestroy(PetscContainer); 17258738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerCreate(MPI_Comm,PetscContainer *); 17268738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1727d382aafbSBarry Smith 1728d382aafbSBarry Smith /* 1729d382aafbSBarry Smith For use in debuggers 1730d382aafbSBarry Smith */ 17318738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscMPIInt PetscGlobalRank; 17328738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscMPIInt PetscGlobalSize; 17338738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscIntView(PetscInt,const PetscInt[],PetscViewer); 17348738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRealView(PetscInt,const PetscReal[],PetscViewer); 17358738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1736d382aafbSBarry Smith 1737d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H) 1738d382aafbSBarry Smith #include <memory.h> 1739d382aafbSBarry Smith #endif 1740d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1741d382aafbSBarry Smith #include <stdlib.h> 1742d382aafbSBarry Smith #endif 1743d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H) 1744d382aafbSBarry Smith #include <strings.h> 1745d382aafbSBarry Smith #endif 1746d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H) 1747d382aafbSBarry Smith #include <string.h> 1748d382aafbSBarry Smith #endif 17496c7e564aSBarry Smith 17506c7e564aSBarry Smith 1751d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H) 1752d382aafbSBarry Smith #include <xmmintrin.h> 1753d382aafbSBarry Smith #endif 1754d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H) 1755d382aafbSBarry Smith #include <stdint.h> 1756d382aafbSBarry Smith #endif 1757d382aafbSBarry Smith 1758d382aafbSBarry Smith /*@C 1759d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1760d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1761d382aafbSBarry Smith PetscMemmove() in that case. 1762d382aafbSBarry Smith 1763d382aafbSBarry Smith Not Collective 1764d382aafbSBarry Smith 1765d382aafbSBarry Smith Input Parameters: 1766d382aafbSBarry Smith + b - pointer to initial memory space 1767d382aafbSBarry Smith - n - length (in bytes) of space to copy 1768d382aafbSBarry Smith 1769d382aafbSBarry Smith Output Parameter: 1770d382aafbSBarry Smith . a - pointer to copy space 1771d382aafbSBarry Smith 1772d382aafbSBarry Smith Level: intermediate 1773d382aafbSBarry Smith 1774d382aafbSBarry Smith Compile Option: 1775d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1776d382aafbSBarry Smith for memory copies on double precision values. 1777d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1778d382aafbSBarry Smith for memory copies on double precision values. 1779d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1780d382aafbSBarry Smith for memory copies on double precision values. 1781d382aafbSBarry Smith 1782d382aafbSBarry Smith Note: 1783d382aafbSBarry Smith This routine is analogous to memcpy(). 1784d382aafbSBarry Smith 1785503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1786503cfb0cSBarry Smith 1787d382aafbSBarry Smith Concepts: memory^copying 1788d382aafbSBarry Smith Concepts: copying^memory 1789d382aafbSBarry Smith 1790d382aafbSBarry Smith .seealso: PetscMemmove() 1791d382aafbSBarry Smith 1792d382aafbSBarry Smith @*/ 17938738c821SJed Brown PETSC_STATIC_INLINE PetscErrorCode PETSCSYS_DLLEXPORT PetscMemcpy(void *a,const void *b,size_t n) 1794d382aafbSBarry Smith { 1795d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1796d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1797d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1798e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1799e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1800d382aafbSBarry Smith #endif 1801d382aafbSBarry Smith PetscFunctionBegin; 1802d382aafbSBarry Smith if (a != b) { 1803d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1804d382aafbSBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) { 1805e32f2f54SBarry Smith SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1806d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1807d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1808d382aafbSBarry Smith } 1809d382aafbSBarry Smith #endif 1810d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1811d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1812d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1813d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1814d382aafbSBarry Smith PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1815d382aafbSBarry Smith BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1816d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1817d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1818d382aafbSBarry Smith #else 1819d382aafbSBarry Smith size_t i; 1820d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1821d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1822d382aafbSBarry Smith #endif 1823d382aafbSBarry Smith } else { 1824d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1825d382aafbSBarry Smith } 1826d382aafbSBarry Smith #elif defined(PETSC_HAVE__INTEL_FAST_MEMCPY) 1827d382aafbSBarry Smith _intel_fast_memcpy((char*)(a),(char*)(b),n); 1828d382aafbSBarry Smith #else 1829d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1830d382aafbSBarry Smith #endif 1831d382aafbSBarry Smith } 1832d382aafbSBarry Smith PetscFunctionReturn(0); 1833d382aafbSBarry Smith } 1834d382aafbSBarry Smith 1835d382aafbSBarry Smith /*@C 1836d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1837d382aafbSBarry Smith 1838d382aafbSBarry Smith Not Collective 1839d382aafbSBarry Smith 1840d382aafbSBarry Smith Input Parameters: 1841d382aafbSBarry Smith + a - pointer to beginning memory location 1842d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1843d382aafbSBarry Smith 1844d382aafbSBarry Smith Level: intermediate 1845d382aafbSBarry Smith 1846d382aafbSBarry Smith Compile Option: 1847d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1848d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1849d382aafbSBarry Smith 1850503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1851503cfb0cSBarry Smith 1852d382aafbSBarry Smith Concepts: memory^zeroing 1853d382aafbSBarry Smith Concepts: zeroing^memory 1854d382aafbSBarry Smith 1855d382aafbSBarry Smith .seealso: PetscMemcpy() 1856d382aafbSBarry Smith @*/ 18578738c821SJed Brown PETSC_STATIC_INLINE PetscErrorCode PETSCSYS_DLLEXPORT PetscMemzero(void *a,size_t n) 1858d382aafbSBarry Smith { 1859d382aafbSBarry Smith if (n > 0) { 1860d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1861e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1862d382aafbSBarry Smith #endif 1863d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1864d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1865d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1866d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1867d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1868d382aafbSBarry Smith } else { 1869d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1870d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1871d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1872d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1873d382aafbSBarry Smith } else { 1874d382aafbSBarry Smith #endif 1875d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1876d382aafbSBarry Smith bzero((char *)a,n); 1877d382aafbSBarry Smith #elif defined (PETSC_HAVE__INTEL_FAST_MEMSET) 1878d382aafbSBarry Smith _intel_fast_memset((char*)a,0,n); 1879d382aafbSBarry Smith #else 1880d382aafbSBarry Smith memset((char*)a,0,n); 1881d382aafbSBarry Smith #endif 1882d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1883d382aafbSBarry Smith } 1884d382aafbSBarry Smith #endif 1885d382aafbSBarry Smith } 1886d382aafbSBarry Smith return 0; 1887d382aafbSBarry Smith } 1888d382aafbSBarry Smith 1889d382aafbSBarry Smith /*MC 1890d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1891d382aafbSBarry Smith 1892eca87e8dSBarry Smith Synopsis: 1893eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1894eca87e8dSBarry Smith 1895d382aafbSBarry Smith Not Collective 1896d382aafbSBarry Smith 1897d382aafbSBarry Smith Input Parameters: 1898d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1899d382aafbSBarry Smith . n - number of elements to fetch 1900d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 190150d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1902d382aafbSBarry Smith 1903d382aafbSBarry Smith Level: developer 1904d382aafbSBarry Smith 1905d382aafbSBarry Smith Notes: 1906d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1907d382aafbSBarry Smith 190850d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 190950d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 191050d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 191163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 191263cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 191363cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1914d382aafbSBarry Smith 1915d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1916d382aafbSBarry Smith address). 1917d382aafbSBarry Smith 1918d382aafbSBarry Smith Concepts: memory 1919d382aafbSBarry Smith M*/ 1920d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1921d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1922d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1923d382aafbSBarry Smith } while (0) 1924d382aafbSBarry Smith 1925d382aafbSBarry Smith /* 1926d382aafbSBarry Smith Allows accessing Matlab Engine 1927d382aafbSBarry Smith */ 1928d382aafbSBarry Smith #include "petscmatlab.h" 1929d382aafbSBarry Smith 1930d382aafbSBarry Smith /* 1931d382aafbSBarry Smith Determine if some of the kernel computation routines use 1932d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1933d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1934d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1935e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1936d382aafbSBarry Smith */ 1937d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1938d382aafbSBarry Smith 1939d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1940d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1941d382aafbSBarry Smith #endif 1942d382aafbSBarry Smith 19435a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19445a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1945d382aafbSBarry Smith #endif 1946d382aafbSBarry Smith 1947d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1948d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1949d382aafbSBarry Smith #endif 1950d382aafbSBarry Smith 1951d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1952d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1953d382aafbSBarry Smith #endif 1954d382aafbSBarry Smith 1955d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1956d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1957d382aafbSBarry Smith #endif 1958d382aafbSBarry Smith 1959d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1960d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1961d382aafbSBarry Smith #endif 1962d382aafbSBarry Smith 1963d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1964d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1965d382aafbSBarry Smith #endif 1966d382aafbSBarry Smith 1967d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1968d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1969d382aafbSBarry Smith #endif 1970d382aafbSBarry Smith 1971d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1972d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1973d382aafbSBarry Smith #endif 1974d382aafbSBarry Smith 1975d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1976d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1977d382aafbSBarry Smith #endif 1978d382aafbSBarry Smith 1979d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1980d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1981d382aafbSBarry Smith #endif 1982d382aafbSBarry Smith 1983d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1984d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1985d382aafbSBarry Smith #endif 1986d382aafbSBarry Smith 1987d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1988d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1989d382aafbSBarry Smith #endif 1990d382aafbSBarry Smith 1991d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1992d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1993d382aafbSBarry Smith #endif 1994d382aafbSBarry Smith 1995d382aafbSBarry Smith #endif 1996d382aafbSBarry Smith 1997d382aafbSBarry Smith /* 1998d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1999d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2000d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2001d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2002d382aafbSBarry Smith ugly extern "C" {} wrappers. 2003d382aafbSBarry Smith */ 2004d382aafbSBarry Smith #if defined(__cplusplus) 2005d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 2006d382aafbSBarry Smith #define EXTERN_C_END } 2007d382aafbSBarry Smith #else 2008d382aafbSBarry Smith #define EXTERN_C_BEGIN 2009d382aafbSBarry Smith #define EXTERN_C_END 2010d382aafbSBarry Smith #endif 2011d382aafbSBarry Smith 2012d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2013d382aafbSBarry Smith 2014d382aafbSBarry Smith /*MC 2015d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2016d382aafbSBarry Smith communication 2017d382aafbSBarry Smith 2018d382aafbSBarry Smith Level: beginner 2019d382aafbSBarry Smith 2020d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2021d382aafbSBarry Smith 2022d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2023d382aafbSBarry Smith M*/ 2024d382aafbSBarry Smith 2025d382aafbSBarry Smith /*MC 2026d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 2027d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 2028d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 2029d382aafbSBarry Smith 2030d382aafbSBarry Smith 2031d382aafbSBarry Smith Level: beginner 2032d382aafbSBarry Smith 2033d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 2034d382aafbSBarry Smith M*/ 2035d382aafbSBarry Smith 2036d382aafbSBarry Smith /*MC 2037d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 2038d382aafbSBarry Smith 2039d382aafbSBarry Smith Level: beginner 2040d382aafbSBarry Smith 2041d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 2042d382aafbSBarry Smith M*/ 2043d382aafbSBarry Smith 2044d382aafbSBarry Smith /*MC 2045d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 2046d382aafbSBarry Smith Level: beginner 2047d382aafbSBarry Smith 2048d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 2049d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2050d382aafbSBarry Smith 2051d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 2052d382aafbSBarry Smith M*/ 2053d382aafbSBarry Smith 2054d382aafbSBarry Smith /*MC 2055d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 2056d382aafbSBarry Smith 2057d382aafbSBarry Smith Level: beginner 2058d382aafbSBarry Smith 2059d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 2060d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2061d382aafbSBarry Smith 2062d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2063d382aafbSBarry Smith M*/ 2064d382aafbSBarry Smith 2065d382aafbSBarry Smith /*MC 2066d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith Level: beginner 2069d382aafbSBarry Smith 2070d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2071d382aafbSBarry Smith pass this value 2072d382aafbSBarry Smith 2073d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2074d382aafbSBarry Smith M*/ 2075d382aafbSBarry Smith 2076d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2077d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2078d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2079d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2080d382aafbSBarry Smith #else 2081d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2082d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2083d382aafbSBarry Smith #endif 2084d382aafbSBarry Smith #endif 2085d382aafbSBarry Smith 2086d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2087d382aafbSBarry Smith 2088d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2089d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2090d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2091d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2092d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2093d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2094d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2095d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX 2147483647 2096d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647 2097d382aafbSBarry Smith 2098d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2099e32f2f54SBarry Smith #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2100e32f2f54SBarry Smith #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2101d382aafbSBarry Smith #define PetscMPIIntCast(a) (a);PetscMPIIntCheck(a) 2102d382aafbSBarry Smith #define PetscBLASIntCast(a) (a);PetscBLASIntCheck(a) 2103d382aafbSBarry Smith 2104d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4) 2105e32f2f54SBarry Smith #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2106d382aafbSBarry Smith #define PetscHDF5IntCast(a) (a);PetscHDF5IntCheck(a) 2107d382aafbSBarry Smith #else 2108d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2109d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2110d382aafbSBarry Smith #endif 2111d382aafbSBarry Smith 2112d382aafbSBarry Smith #else 2113d382aafbSBarry Smith #define PetscMPIIntCheck(a) 2114d382aafbSBarry Smith #define PetscBLASIntCheck(a) 2115d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2116d382aafbSBarry Smith #define PetscMPIIntCast(a) a 2117d382aafbSBarry Smith #define PetscBLASIntCast(a) a 2118d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2119d382aafbSBarry Smith #endif 2120d382aafbSBarry Smith 2121d382aafbSBarry Smith 2122d382aafbSBarry Smith /* 2123d382aafbSBarry Smith The IBM include files define hz, here we hide it so that it may be used 2124d382aafbSBarry Smith as a regular user variable. 2125d382aafbSBarry Smith */ 2126d382aafbSBarry Smith #if defined(hz) 2127d382aafbSBarry Smith #undef hz 2128d382aafbSBarry Smith #endif 2129d382aafbSBarry Smith 2130d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2131d382aafbSBarry Smith 2132d382aafbSBarry Smith 2133d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2134d382aafbSBarry Smith #include <limits.h> 2135d382aafbSBarry Smith #endif 2136d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2137d382aafbSBarry Smith #include <sys/param.h> 2138d382aafbSBarry Smith #endif 2139d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2140d382aafbSBarry Smith #include <sys/types.h> 2141d382aafbSBarry Smith #endif 2142d382aafbSBarry Smith #if defined(MAXPATHLEN) 2143d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2144d382aafbSBarry Smith #elif defined(MAX_PATH) 2145d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2146d382aafbSBarry Smith #elif defined(_MAX_PATH) 2147d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2148d382aafbSBarry Smith #else 2149d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2150d382aafbSBarry Smith #endif 2151d382aafbSBarry Smith 2152d382aafbSBarry Smith /* Special support for C++ */ 2153d382aafbSBarry Smith #include "petscsys.hh" 21546c7e564aSBarry Smith 2155d382aafbSBarry Smith 2156d382aafbSBarry Smith /*MC 2157d382aafbSBarry Smith 2158d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2159d382aafbSBarry Smith 2160d382aafbSBarry Smith $ 1) classic Fortran 77 style 2161d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc 2162d382aafbSBarry Smith $ XXX variablename 2163d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2164d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2165d382aafbSBarry Smith $ 2166d382aafbSBarry Smith $ 2) classic Fortran 90 style 2167d1716517SSatish Balay $#include "finclude/petscXXX.h" 2168d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2169d382aafbSBarry Smith $ XXX variablename 2170d382aafbSBarry Smith $ 2171d382aafbSBarry Smith $ 3) Using Fortran modules 2172d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2173d382aafbSBarry Smith $ use petscXXXX 2174d382aafbSBarry Smith $ XXX variablename 2175d382aafbSBarry Smith $ 2176d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2177d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2178d382aafbSBarry Smith $ use petscXXXX 2179d382aafbSBarry Smith $ type(XXX) variablename 2180e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2181d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2182d382aafbSBarry Smith 2183d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2184d382aafbSBarry Smith 2185d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2186d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2187d382aafbSBarry Smith $ integer variablename 2188d382aafbSBarry Smith $ 2189d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2190d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2191d382aafbSBarry Smith 2192d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2193d382aafbSBarry Smith for only a few PETSc functions. 2194d382aafbSBarry Smith 2195d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2196d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2197d382aafbSBarry Smith you cannot have something like 2198d382aafbSBarry Smith $ PetscInt row,col 2199d382aafbSBarry Smith $ PetscScalar val 2200d382aafbSBarry Smith $ ... 2201d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2202d382aafbSBarry Smith You must instead have 2203d382aafbSBarry Smith $ PetscInt row(1),col(1) 2204d382aafbSBarry Smith $ PetscScalar val(1) 2205d382aafbSBarry Smith $ ... 2206d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2207d382aafbSBarry Smith 2208d382aafbSBarry Smith 2209d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2210d382aafbSBarry Smith 2211d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2212d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2213d382aafbSBarry Smith 2214d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2215d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2216d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2217d382aafbSBarry Smith 2218d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2219e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2220d382aafbSBarry Smith 2221d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2222d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2223d382aafbSBarry Smith 2224d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2225d382aafbSBarry Smith automatically by "make allfortranstubs". 2226d382aafbSBarry Smith 2227e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2228d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2229d382aafbSBarry Smith include their predecessors 2230d382aafbSBarry Smith 2231d382aafbSBarry Smith Level: beginner 2232d382aafbSBarry Smith 2233d382aafbSBarry Smith M*/ 2234d382aafbSBarry Smith 22358738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetArchType(char[],size_t); 22368738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetHostName(char[],size_t); 22378738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetUserName(char[],size_t); 22388738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetProgramName(char[],size_t); 22398738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetProgramName(const char[]); 22408738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetDate(char[],size_t); 2241d382aafbSBarry Smith 22428738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortInt(PetscInt,PetscInt[]); 22438738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 22448738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 22458738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 22468738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 22478738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 22488738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 22498738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortReal(PetscInt,PetscReal[]); 22508738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 22518738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 22528738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2253ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2254d382aafbSBarry Smith 22558738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDisplay(void); 22568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetDisplay(char[],size_t); 2257d382aafbSBarry Smith 2258d382aafbSBarry Smith /*E 2259d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2260d382aafbSBarry Smith with an optional dynamic library name, for example 2261d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2262d382aafbSBarry Smith 2263d382aafbSBarry Smith Level: beginner 2264d382aafbSBarry Smith 2265e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2266d382aafbSBarry Smith with the option --download-sprng 2267d382aafbSBarry Smith 2268d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom 2269d382aafbSBarry Smith E*/ 2270d382aafbSBarry Smith #define PetscRandomType char* 2271d382aafbSBarry Smith #define PETSCRAND "rand" 2272d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2273d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2274d382aafbSBarry Smith 2275d382aafbSBarry Smith /* Logging support */ 22768738c821SJed Brown extern PETSCSYS_DLLEXPORT PetscClassId PETSC_RANDOM_CLASSID; 2277d382aafbSBarry Smith 22788738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomInitializePackage(const char[]); 2279d382aafbSBarry Smith 2280d382aafbSBarry Smith /*S 2281d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2282d382aafbSBarry Smith 2283d382aafbSBarry Smith Level: intermediate 2284d382aafbSBarry Smith 2285d382aafbSBarry Smith Concepts: random numbers 2286d382aafbSBarry Smith 2287d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2288d382aafbSBarry Smith S*/ 2289d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2290d382aafbSBarry Smith 2291d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2292d382aafbSBarry Smith extern PetscFList PetscRandomList; 2293ace3abfcSBarry Smith extern PetscBool PetscRandomRegisterAllCalled; 2294d382aafbSBarry Smith 22958738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegisterAll(const char []); 22968738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 22978738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomRegisterDestroy(void); 22988738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetType(PetscRandom, const PetscRandomType); 22998738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetFromOptions(PetscRandom); 23008738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetType(PetscRandom, const PetscRandomType*); 23018738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomViewFromOptions(PetscRandom,char*); 23028738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomView(PetscRandom,PetscViewer); 2303d382aafbSBarry Smith 2304d382aafbSBarry Smith /*MC 2305d382aafbSBarry Smith PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2306d382aafbSBarry Smith 2307d382aafbSBarry Smith Synopsis: 23081890ba74SBarry Smith PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2309d382aafbSBarry Smith 2310d382aafbSBarry Smith Not Collective 2311d382aafbSBarry Smith 2312d382aafbSBarry Smith Input Parameters: 2313d382aafbSBarry Smith + name - The name of a new user-defined creation routine 2314d382aafbSBarry Smith . path - The path (either absolute or relative) of the library containing this routine 2315d382aafbSBarry Smith . func_name - The name of routine to create method context 2316d382aafbSBarry Smith - create_func - The creation routine itself 2317d382aafbSBarry Smith 2318d382aafbSBarry Smith Notes: 2319d382aafbSBarry Smith PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2320d382aafbSBarry Smith 2321d382aafbSBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2322d382aafbSBarry Smith 2323d382aafbSBarry Smith Sample usage: 2324d382aafbSBarry Smith .vb 2325d382aafbSBarry Smith PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2326d382aafbSBarry Smith .ve 2327d382aafbSBarry Smith 2328d382aafbSBarry Smith Then, your random type can be chosen with the procedural interface via 2329d382aafbSBarry Smith .vb 2330d382aafbSBarry Smith PetscRandomCreate(MPI_Comm, PetscRandom *); 2331d382aafbSBarry Smith PetscRandomSetType(PetscRandom,"my_random_name"); 2332d382aafbSBarry Smith .ve 2333d382aafbSBarry Smith or at runtime via the option 2334d382aafbSBarry Smith .vb 2335d382aafbSBarry Smith -random_type my_random_name 2336d382aafbSBarry Smith .ve 2337d382aafbSBarry Smith 2338d382aafbSBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2339d382aafbSBarry Smith 2340d382aafbSBarry Smith For an example of the code needed to interface your own random number generator see 2341d382aafbSBarry Smith src/sys/random/impls/rand/rand.c 2342d382aafbSBarry Smith 2343d382aafbSBarry Smith Level: advanced 2344d382aafbSBarry Smith 2345d382aafbSBarry Smith .keywords: PetscRandom, register 2346d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2347d382aafbSBarry Smith M*/ 2348d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2349d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2350d382aafbSBarry Smith #else 2351d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2352d382aafbSBarry Smith #endif 2353d382aafbSBarry Smith 23548738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomCreate(MPI_Comm,PetscRandom*); 23558738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetValue(PetscRandom,PetscScalar*); 23568738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetValueReal(PetscRandom,PetscReal*); 23578738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 23588738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 23598738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSetSeed(PetscRandom,unsigned long); 23608738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomGetSeed(PetscRandom,unsigned long *); 23618738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomSeed(PetscRandom); 23628738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscRandomDestroy(PetscRandom); 2363d382aafbSBarry Smith 23648738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetFullPath(const char[],char[],size_t); 23658738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetRelativePath(const char[],char[],size_t); 23668738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetWorkingDirectory(char[],size_t); 23678738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetRealPath(const char[],char[]); 23688738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetHomeDirectory(char[],size_t); 2369ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTestFile(const char[],char,PetscBool *); 2370ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscTestDirectory(const char[],char,PetscBool *); 2371d382aafbSBarry Smith 23728738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryRead(int,void*,PetscInt,PetscDataType); 23738738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2374ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2375ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 23768738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryOpen(const char[],PetscFileMode,int *); 23778738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinaryClose(int); 2378ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSharedTmp(MPI_Comm,PetscBool *); 2379ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 23808738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGetTmp(MPI_Comm,char[],size_t); 2381ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2382ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 23838738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscOpenSocket(char*,int,int*); 2384a240c4b3SBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscWebServe(MPI_Comm,int); 2385d382aafbSBarry Smith 2386d382aafbSBarry Smith /* 2387d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2388d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2389d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2390d382aafbSBarry Smith PetscBinarySeek(). 2391d382aafbSBarry Smith */ 2392d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2393d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2394d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2395d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2396d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2397d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2398d382aafbSBarry Smith 2399d382aafbSBarry Smith /*E 2400d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2401d382aafbSBarry Smith 2402d382aafbSBarry Smith Level: advanced 2403d382aafbSBarry Smith 2404d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2405d382aafbSBarry Smith E*/ 2406d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 24078738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 24088738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2409d382aafbSBarry Smith 24108738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebugTerminal(const char[]); 2411ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebugger(const char[],PetscBool ); 24128738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDefaultDebugger(void); 24138738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSetDebuggerFromString(char*); 24148738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscAttachDebugger(void); 24158738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscStopForDebugger(void); 2416d382aafbSBarry Smith 24178738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 24188738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 24198738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 24208738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 24218738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2422d382aafbSBarry Smith 2423ace3abfcSBarry Smith EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2424d382aafbSBarry Smith 2425d382aafbSBarry Smith /*E 2426d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2427d382aafbSBarry Smith 2428d382aafbSBarry Smith Level: beginner 2429d382aafbSBarry Smith 2430d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2431d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2432d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2433d382aafbSBarry Smith E*/ 2434d382aafbSBarry Smith typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES} InsertMode; 2435d382aafbSBarry Smith 2436d382aafbSBarry Smith /*MC 2437d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2438d382aafbSBarry Smith 2439d382aafbSBarry Smith Level: beginner 2440d382aafbSBarry Smith 2441d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2442eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2443eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2444d382aafbSBarry Smith 2445d382aafbSBarry Smith M*/ 2446d382aafbSBarry Smith 2447d382aafbSBarry Smith /*MC 2448d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2449d382aafbSBarry Smith value into that location 2450d382aafbSBarry Smith 2451d382aafbSBarry Smith Level: beginner 2452d382aafbSBarry Smith 2453d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2454eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2455eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2456d382aafbSBarry Smith 2457d382aafbSBarry Smith M*/ 2458d382aafbSBarry Smith 2459d382aafbSBarry Smith /*MC 2460d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2461d382aafbSBarry Smith 2462d382aafbSBarry Smith Level: beginner 2463d382aafbSBarry Smith 2464d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2465d382aafbSBarry Smith 2466d382aafbSBarry Smith M*/ 2467d382aafbSBarry Smith 2468d382aafbSBarry Smith /*S 2469d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2470d382aafbSBarry Smith 2471d382aafbSBarry Smith Level: advanced 2472d382aafbSBarry Smith 2473d382aafbSBarry Smith Concepts: communicator, create 2474d382aafbSBarry Smith S*/ 2475d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2476d382aafbSBarry Smith 2477d382aafbSBarry Smith struct _n_PetscSubcomm { 2478d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2479d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2480d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 2481d382aafbSBarry Smith PetscInt n; /* num of subcommunicators under the parent communicator */ 2482d382aafbSBarry Smith PetscInt color; /* color of processors belong to this communicator */ 2483d382aafbSBarry Smith }; 2484d382aafbSBarry Smith 2485638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 2486638faf0bSHong Zhang extern const char *PetscSubcommTypes[]; 2487638faf0bSHong Zhang 2488d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 24898738c821SJed Brown EXTERN PetscErrorCode PETSCSYS_DLLEXPORT PetscSubcommDestroy(PetscSubcomm); 2490d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2491d8a68f86SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetType(PetscSubcomm,const PetscSubcommType); 24921ba920a7SHong Zhang EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt); 2493d382aafbSBarry Smith 2494d382aafbSBarry Smith PETSC_EXTERN_CXX_END 24956c7e564aSBarry Smith 2496d382aafbSBarry Smith #endif 2497