xref: /petsc/include/petscsys.h (revision 7c2de77555ca8df2e98ec67e3ad5e704141d2a43)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
112981ebdbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/
122981ebdbSBarry Smith    does not exist and petscconf.h is in the same directory as the other PETSc include files.
13d382aafbSBarry Smith */
142c8e378dSBarry Smith #include <petscconf.h>
152c8e378dSBarry Smith #include <petscfix.h>
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
29ea0fecefSShri Abhyankar #define _GNU_SOURCE
30ea0fecefSShri Abhyankar #endif
3173fca5a0SBarry Smith #endif
3273fca5a0SBarry Smith 
33d382aafbSBarry Smith /* ========================================================================== */
34d382aafbSBarry Smith /*
352981ebdbSBarry Smith    This facilitates using the C version of PETSc from C++ and the
36e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
37d382aafbSBarry Smith */
38d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
39d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
40d382aafbSBarry Smith #endif
411ec50b02SJed Brown 
421ec50b02SJed Brown #if defined(__cplusplus)
431ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
441ec50b02SJed Brown #else
451ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
461ec50b02SJed Brown #endif
47d382aafbSBarry Smith 
48ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */
49014dd563SJed Brown #  define PETSC_DLLEXPORT __declspec(dllexport)
50014dd563SJed Brown #  define PETSC_DLLIMPORT __declspec(dllimport)
51014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY)
52014dd563SJed Brown #  define PETSC_DLLEXPORT __attribute__((visibility ("default")))
53014dd563SJed Brown #  define PETSC_DLLIMPORT __attribute__((visibility ("default")))
54d382aafbSBarry Smith #else
55014dd563SJed Brown #  define PETSC_DLLEXPORT
56014dd563SJed Brown #  define PETSC_DLLIMPORT
57014dd563SJed Brown #endif
58014dd563SJed Brown 
59014dd563SJed Brown #if defined(petsc_EXPORTS)      /* CMake defines this when building the shared library */
60014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT
61014dd563SJed Brown #else  /* Win32 users need this to import symbols from petsc.dll */
62014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT
63014dd563SJed Brown #endif
64014dd563SJed Brown 
65014dd563SJed Brown #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
66014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC
67638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C"
68014dd563SJed Brown #else
69014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
70638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF
71d382aafbSBarry Smith #endif
7227710113SBarry Smith 
732c8e378dSBarry Smith #include <petscversion.h>
74301d30feSBarry Smith #define PETSC_AUTHOR_INFO  "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
75d382aafbSBarry Smith 
76d382aafbSBarry Smith /* ========================================================================== */
77d382aafbSBarry Smith 
78d382aafbSBarry Smith /*
79d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
82d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
83d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
84d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
85d382aafbSBarry Smith     mpicxx.h directly in their code
86d382aafbSBarry Smith */
87d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
88d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
892c8e378dSBarry Smith #include <mpi.h>
9065013866SBarry Smith 
91d382aafbSBarry Smith /*
922981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
93d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
94d382aafbSBarry Smith */
95d382aafbSBarry Smith #include <stdio.h>
96d382aafbSBarry Smith 
97d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
98d382aafbSBarry Smith #if !defined(MPIAPI)
99d382aafbSBarry Smith #define MPIAPI
100d382aafbSBarry Smith #endif
101d382aafbSBarry Smith 
102b3506946SBarry Smith 
103d382aafbSBarry Smith /*MC
104d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
105d382aafbSBarry Smith 
106d382aafbSBarry Smith     Level: beginner
107d382aafbSBarry Smith 
108d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
109d382aafbSBarry Smith M*/
110d382aafbSBarry Smith typedef int PetscErrorCode;
111d382aafbSBarry Smith 
112d382aafbSBarry Smith /*MC
113d382aafbSBarry Smith 
114503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
115d382aafbSBarry Smith          (internal integer in the data structure used for error
1162981ebdbSBarry Smith          checking). These are all computed by an offset from the lowest
1170700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
118d382aafbSBarry Smith 
119d382aafbSBarry Smith     Level: advanced
120d382aafbSBarry Smith 
1210700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
122d382aafbSBarry Smith M*/
1230700a824SBarry Smith typedef int PetscClassId;
124d382aafbSBarry Smith 
125d382aafbSBarry Smith 
126d382aafbSBarry Smith /*MC
127d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
128d382aafbSBarry Smith 
129d382aafbSBarry Smith     Level: intermediate
130d382aafbSBarry Smith 
131d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1323b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
133d382aafbSBarry Smith 
1343b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
1352981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
136d382aafbSBarry Smith 
1373b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
1382981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
139d382aafbSBarry Smith 
140d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
141d382aafbSBarry Smith 
142d382aafbSBarry Smith M*/
143d382aafbSBarry Smith typedef int PetscMPIInt;
144d382aafbSBarry Smith 
145d382aafbSBarry Smith /*MC
146d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
147d382aafbSBarry Smith 
148d382aafbSBarry Smith     Level: intermediate
149d382aafbSBarry Smith 
150d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
151d382aafbSBarry Smith M*/
152d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
153d382aafbSBarry Smith 
154d382aafbSBarry Smith /*MC
155d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1563b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
157d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
158d382aafbSBarry Smith 
159d382aafbSBarry Smith    Level: intermediate
160d382aafbSBarry Smith 
161d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
162d382aafbSBarry Smith M*/
163f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
164f505b413SSatish Balay typedef long long Petsc64bitInt;
165f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
166236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
167236ed0a3SSatish Balay #else
168f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
169236ed0a3SSatish Balay #endif
170d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
171236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
172d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
173d382aafbSBarry Smith #else
174d382aafbSBarry Smith typedef int PetscInt;
175d382aafbSBarry Smith #define MPIU_INT MPI_INT
176d382aafbSBarry Smith #endif
177236ed0a3SSatish Balay 
178d382aafbSBarry Smith 
179702bc34aSSatish Balay /*MC
180702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
181702bc34aSSatish Balay 
182702bc34aSSatish Balay     Level: intermediate
183702bc34aSSatish Balay 
184702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
185702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
186702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
187702bc34aSSatish Balay 
188702bc34aSSatish Balay     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1892981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
190702bc34aSSatish Balay 
191702bc34aSSatish Balay     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1922981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
193702bc34aSSatish Balay 
1942981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
195702bc34aSSatish Balay      if you run ./configure with the option
196702bc34aSSatish Balay      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
1972981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
1982981ebdbSBarry Smith 
1992981ebdbSBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices
2002981ebdbSBarry Smith 
2012981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
202702bc34aSSatish Balay 
203702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
204702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
205702bc34aSSatish Balay 
206702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt
207702bc34aSSatish Balay 
208702bc34aSSatish Balay M*/
209702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
210702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt;
211702bc34aSSatish Balay #else
212702bc34aSSatish Balay typedef int PetscBLASInt;
213702bc34aSSatish Balay #endif
214702bc34aSSatish Balay 
21558b60935SBarry Smith /*EC
21658b60935SBarry Smith 
2172981ebdbSBarry Smith     PetscPrecision - indicates what precision the object is using. This is currently not used.
21858b60935SBarry Smith 
21958b60935SBarry Smith     Level: advanced
22058b60935SBarry Smith 
22158b60935SBarry Smith .seealso: PetscObjectSetPrecision()
22258b60935SBarry Smith E*/
22358b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
224014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[];
22558b60935SBarry Smith 
226503cfb0cSBarry Smith /*
227503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
228503cfb0cSBarry Smith */
229d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
230d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
231d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
232d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
233d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
234d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
235d382aafbSBarry Smith #else
236d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
237d382aafbSBarry Smith #endif
238d382aafbSBarry Smith 
239d382aafbSBarry Smith 
240d382aafbSBarry Smith /*
241d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
242d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
243d382aafbSBarry Smith */
244014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT;
245d382aafbSBarry Smith 
246d382aafbSBarry Smith /*
247d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
248d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
249d382aafbSBarry Smith */
250014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR;
251d382aafbSBarry Smith 
252d382aafbSBarry Smith /*MC
253d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
254d382aafbSBarry Smith 
255d382aafbSBarry Smith     Synopsis:
256ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
257d382aafbSBarry Smith 
258eca87e8dSBarry Smith     Not Collective
259eca87e8dSBarry Smith 
260d382aafbSBarry Smith     Input Parameters:
261d382aafbSBarry Smith .   cond - condition or expression
262d382aafbSBarry Smith 
263d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
264d382aafbSBarry Smith     branch is unlikely.
265d382aafbSBarry Smith 
266d382aafbSBarry Smith     Level: advanced
267d382aafbSBarry Smith 
268d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
269d382aafbSBarry Smith M*/
270d382aafbSBarry Smith 
271d382aafbSBarry Smith /*MC
272d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
273d382aafbSBarry Smith 
274d382aafbSBarry Smith     Synopsis:
275ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
276d382aafbSBarry Smith 
277eca87e8dSBarry Smith     Not Collective
278eca87e8dSBarry Smith 
279d382aafbSBarry Smith     Input Parameters:
280d382aafbSBarry Smith .   cond - condition or expression
281d382aafbSBarry Smith 
282d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
283d382aafbSBarry Smith     branch is likely.
284d382aafbSBarry Smith 
285d382aafbSBarry Smith     Level: advanced
286d382aafbSBarry Smith 
287d382aafbSBarry Smith .seealso: PetscUnlikely()
288d382aafbSBarry Smith M*/
289d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
290d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
291d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
292d382aafbSBarry Smith #else
293cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
294cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
295d382aafbSBarry Smith #endif
296d382aafbSBarry Smith 
297d382aafbSBarry Smith /*
298d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
299d382aafbSBarry Smith */
3002c8e378dSBarry Smith #include <petscmath.h>
301d382aafbSBarry Smith 
302d382aafbSBarry Smith /*
303d382aafbSBarry Smith     Declare extern C stuff after including external header files
304d382aafbSBarry Smith */
305d382aafbSBarry Smith 
306d382aafbSBarry Smith 
307d382aafbSBarry Smith /*
308d382aafbSBarry Smith        Basic PETSc constants
309d382aafbSBarry Smith */
310d382aafbSBarry Smith 
311d382aafbSBarry Smith /*E
312ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
313d382aafbSBarry Smith 
314d382aafbSBarry Smith    Level: beginner
315d382aafbSBarry Smith 
316ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
31734e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
31834e82e7dSBarry Smith 
319d382aafbSBarry Smith E*/
320ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
3216a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[];
32270b3c8c7SBarry Smith 
32370b3c8c7SBarry Smith /*E
32470b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
32570b3c8c7SBarry Smith 
32670b3c8c7SBarry Smith    Level: beginner
32770b3c8c7SBarry Smith 
32870b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
32970b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
33070b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
33170b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
33270b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
33370b3c8c7SBarry Smith 
33470b3c8c7SBarry Smith E*/
33570b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
3366a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[];
337d382aafbSBarry Smith 
338d382aafbSBarry Smith /*MC
339ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
340d382aafbSBarry Smith 
341d382aafbSBarry Smith     Level: beginner
342d382aafbSBarry Smith 
343d382aafbSBarry Smith     Note: Zero integer
344d382aafbSBarry Smith 
345ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
346d382aafbSBarry Smith M*/
347d382aafbSBarry Smith 
348d382aafbSBarry Smith /*MC
349ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
350d382aafbSBarry Smith 
351d382aafbSBarry Smith     Level: beginner
352d382aafbSBarry Smith 
353d382aafbSBarry Smith     Note: Nonzero integer
354d382aafbSBarry Smith 
355ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
356d382aafbSBarry Smith M*/
357d382aafbSBarry Smith 
358d382aafbSBarry Smith /*MC
359d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
360d382aafbSBarry Smith 
361d382aafbSBarry Smith    Level: beginner
362d382aafbSBarry Smith 
363d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
364d382aafbSBarry Smith           some default
365d382aafbSBarry Smith 
366d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
367503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
368d382aafbSBarry Smith 
36934e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
37034e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
37134e82e7dSBarry Smith 
372d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
373d382aafbSBarry Smith 
374d382aafbSBarry Smith M*/
375d382aafbSBarry Smith #define PETSC_NULL           0
376d382aafbSBarry Smith 
377d382aafbSBarry Smith /*MC
378d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
379d382aafbSBarry Smith 
380d382aafbSBarry Smith    Level: beginner
381d382aafbSBarry Smith 
382d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
383d382aafbSBarry Smith           some default
384d382aafbSBarry Smith 
385d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
386d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
387d382aafbSBarry Smith 
388d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
389d382aafbSBarry Smith 
390d382aafbSBarry Smith M*/
391d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
392d382aafbSBarry Smith 
393d382aafbSBarry Smith /*MC
394557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
395557d4da8SBarry Smith        where you wish PETSc to use the default.
396557d4da8SBarry Smith 
397557d4da8SBarry Smith    Level: beginner
398557d4da8SBarry Smith 
399557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
400557d4da8SBarry Smith 
401557d4da8SBarry Smith M*/
402557d4da8SBarry Smith #define PETSC_DECIDE  -1
403557d4da8SBarry Smith 
404557d4da8SBarry Smith /*MC
405d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
406d382aafbSBarry Smith        where you wish PETSc to compute the required value.
407d382aafbSBarry Smith 
408d382aafbSBarry Smith    Level: beginner
409d382aafbSBarry Smith 
410557d4da8SBarry Smith 
411557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
412557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
413557d4da8SBarry Smith 
414d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
415d382aafbSBarry Smith 
416d382aafbSBarry Smith M*/
417d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
418d382aafbSBarry Smith 
419d382aafbSBarry Smith /*MC
420557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
421557d4da8SBarry Smith        where you wish PETSc to use the default.
422557d4da8SBarry Smith 
423557d4da8SBarry Smith    Level: beginner
424557d4da8SBarry Smith 
425557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
426557d4da8SBarry Smith 
427557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
428557d4da8SBarry Smith 
429557d4da8SBarry Smith M*/
430557d4da8SBarry Smith #define PETSC_DEFAULT  -2
431557d4da8SBarry Smith 
432557d4da8SBarry Smith /*MC
433d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
434d382aafbSBarry Smith            all the processs that PETSc knows about.
435d382aafbSBarry Smith 
436d382aafbSBarry Smith    Level: beginner
437d382aafbSBarry Smith 
438d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
439d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
440d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
441d382aafbSBarry Smith           PetscInitialize()
442d382aafbSBarry Smith 
443d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
444d382aafbSBarry Smith 
445d382aafbSBarry Smith M*/
446014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
447d382aafbSBarry Smith 
448d382aafbSBarry Smith /*MC
449503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
450d382aafbSBarry Smith 
451d382aafbSBarry Smith    Level: beginner
452d382aafbSBarry Smith 
453d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
454d382aafbSBarry Smith 
455d382aafbSBarry Smith M*/
456d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
457d382aafbSBarry Smith 
458014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled;
459014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled;
460014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize;
461d382aafbSBarry Smith 
462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
465d382aafbSBarry Smith 
466d382aafbSBarry Smith /*MC
467d382aafbSBarry Smith    PetscMalloc - Allocates memory
468d382aafbSBarry Smith 
469eca87e8dSBarry Smith    Synopsis:
470eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
471eca87e8dSBarry Smith 
472eca87e8dSBarry Smith    Not Collective
473eca87e8dSBarry Smith 
474d382aafbSBarry Smith    Input Parameter:
475d382aafbSBarry Smith .  m - number of bytes to allocate
476d382aafbSBarry Smith 
477d382aafbSBarry Smith    Output Parameter:
478d382aafbSBarry Smith .  result - memory allocated
479d382aafbSBarry Smith 
480d382aafbSBarry Smith    Level: beginner
481d382aafbSBarry Smith 
482d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
483d382aafbSBarry Smith 
484d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
485d382aafbSBarry Smith           properly handle not freeing the null pointer.
486d382aafbSBarry Smith 
487d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
488d382aafbSBarry Smith 
489d382aafbSBarry Smith   Concepts: memory allocation
490d382aafbSBarry Smith 
491d382aafbSBarry Smith M*/
4922714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
493d382aafbSBarry Smith 
494d382aafbSBarry Smith /*MC
495503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
496d382aafbSBarry Smith 
497d382aafbSBarry Smith    Synopsis:
498d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
499d382aafbSBarry Smith 
500eca87e8dSBarry Smith    Not Collective
501eca87e8dSBarry Smith 
502eca87e8dSBarry Smith    Input Parameters:
503eca87e8dSBarry Smith .  addr - address to align (any pointer type)
504eca87e8dSBarry Smith 
505d382aafbSBarry Smith    Level: developer
506d382aafbSBarry Smith 
507d382aafbSBarry Smith .seealso: PetscMallocAlign()
508d382aafbSBarry Smith 
509d382aafbSBarry Smith   Concepts: memory allocation
510d382aafbSBarry Smith M*/
511d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
512d382aafbSBarry Smith 
513d382aafbSBarry Smith /*MC
514503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
515d382aafbSBarry Smith 
516eca87e8dSBarry Smith    Synopsis:
517eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
518eca87e8dSBarry Smith 
519eca87e8dSBarry Smith    Not Collective
520eca87e8dSBarry Smith 
521d382aafbSBarry Smith    Input Parameter:
522d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
523d382aafbSBarry Smith .  t1 - type of first memory elements
524d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
525d382aafbSBarry Smith -  t2 - type of second memory elements
526d382aafbSBarry Smith 
527d382aafbSBarry Smith    Output Parameter:
528d382aafbSBarry Smith +  r1 - memory allocated in first chunk
529d382aafbSBarry Smith -  r2 - memory allocated in second chunk
530d382aafbSBarry Smith 
531d382aafbSBarry Smith    Level: developer
532d382aafbSBarry Smith 
533d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
534d382aafbSBarry Smith 
535d382aafbSBarry Smith   Concepts: memory allocation
536d382aafbSBarry Smith 
537d382aafbSBarry Smith M*/
538d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
539d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
540d382aafbSBarry Smith #else
5412981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
542d382aafbSBarry Smith #endif
543d382aafbSBarry Smith 
544d382aafbSBarry Smith /*MC
545503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
546d382aafbSBarry Smith 
547eca87e8dSBarry Smith    Synopsis:
548eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
549eca87e8dSBarry Smith 
550eca87e8dSBarry Smith    Not Collective
551eca87e8dSBarry Smith 
552d382aafbSBarry Smith    Input Parameter:
553d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
554d382aafbSBarry Smith .  t1 - type of first memory elements
555d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
556d382aafbSBarry Smith .  t2 - type of second memory elements
557d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
558d382aafbSBarry Smith -  t3 - type of third memory elements
559d382aafbSBarry Smith 
560d382aafbSBarry Smith    Output Parameter:
561d382aafbSBarry Smith +  r1 - memory allocated in first chunk
562d382aafbSBarry Smith .  r2 - memory allocated in second chunk
563d382aafbSBarry Smith -  r3 - memory allocated in third chunk
564d382aafbSBarry Smith 
565d382aafbSBarry Smith    Level: developer
566d382aafbSBarry Smith 
567d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
568d382aafbSBarry Smith 
569d382aafbSBarry Smith   Concepts: memory allocation
570d382aafbSBarry Smith 
571d382aafbSBarry Smith M*/
572d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
573d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
574d382aafbSBarry Smith #else
5753b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
576d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
577d382aafbSBarry Smith #endif
578d382aafbSBarry Smith 
579d382aafbSBarry Smith /*MC
580503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
581d382aafbSBarry Smith 
582eca87e8dSBarry Smith    Synopsis:
583eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
584eca87e8dSBarry Smith 
585eca87e8dSBarry Smith    Not Collective
586eca87e8dSBarry Smith 
587d382aafbSBarry Smith    Input Parameter:
588d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
589d382aafbSBarry Smith .  t1 - type of first memory elements
590d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
591d382aafbSBarry Smith .  t2 - type of second memory elements
592d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
593d382aafbSBarry Smith .  t3 - type of third memory elements
594d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
595d382aafbSBarry Smith -  t4 - type of fourth memory elements
596d382aafbSBarry Smith 
597d382aafbSBarry Smith    Output Parameter:
598d382aafbSBarry Smith +  r1 - memory allocated in first chunk
599d382aafbSBarry Smith .  r2 - memory allocated in second chunk
600d382aafbSBarry Smith .  r3 - memory allocated in third chunk
601d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
602d382aafbSBarry Smith 
603d382aafbSBarry Smith    Level: developer
604d382aafbSBarry Smith 
605d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
606d382aafbSBarry Smith 
607d382aafbSBarry Smith   Concepts: memory allocation
608d382aafbSBarry Smith 
609d382aafbSBarry Smith M*/
610d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
611d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
612d382aafbSBarry Smith #else
613d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6143b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
615d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
616d382aafbSBarry Smith #endif
617d382aafbSBarry Smith 
618d382aafbSBarry Smith /*MC
619503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
620d382aafbSBarry Smith 
621eca87e8dSBarry Smith    Synopsis:
622eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
623eca87e8dSBarry Smith 
624eca87e8dSBarry Smith    Not Collective
625eca87e8dSBarry Smith 
626d382aafbSBarry Smith    Input Parameter:
627d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
628d382aafbSBarry Smith .  t1 - type of first memory elements
629d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
630d382aafbSBarry Smith .  t2 - type of second memory elements
631d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
632d382aafbSBarry Smith .  t3 - type of third memory elements
633d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
634d382aafbSBarry Smith .  t4 - type of fourth memory elements
635d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
636d382aafbSBarry Smith -  t5 - type of fifth memory elements
637d382aafbSBarry Smith 
638d382aafbSBarry Smith    Output Parameter:
639d382aafbSBarry Smith +  r1 - memory allocated in first chunk
640d382aafbSBarry Smith .  r2 - memory allocated in second chunk
641d382aafbSBarry Smith .  r3 - memory allocated in third chunk
642d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
643d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
644d382aafbSBarry Smith 
645d382aafbSBarry Smith    Level: developer
646d382aafbSBarry Smith 
647d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
648d382aafbSBarry Smith 
649d382aafbSBarry Smith   Concepts: memory allocation
650d382aafbSBarry Smith 
651d382aafbSBarry Smith M*/
652d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
653d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
654d382aafbSBarry Smith #else
655d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
6563b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
657d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
658d382aafbSBarry Smith #endif
659d382aafbSBarry Smith 
660d382aafbSBarry Smith 
661d382aafbSBarry Smith /*MC
662503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
663d382aafbSBarry Smith 
664eca87e8dSBarry Smith    Synopsis:
665eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
666eca87e8dSBarry Smith 
667eca87e8dSBarry Smith    Not Collective
668eca87e8dSBarry Smith 
669d382aafbSBarry Smith    Input Parameter:
670d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
671d382aafbSBarry Smith .  t1 - type of first memory elements
672d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
673d382aafbSBarry Smith .  t2 - type of second memory elements
674d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
675d382aafbSBarry Smith .  t3 - type of third memory elements
676d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
677d382aafbSBarry Smith .  t4 - type of fourth memory elements
678d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
679d382aafbSBarry Smith .  t5 - type of fifth memory elements
680d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
681d382aafbSBarry Smith -  t6 - type of sixth memory elements
682d382aafbSBarry Smith 
683d382aafbSBarry Smith    Output Parameter:
684d382aafbSBarry Smith +  r1 - memory allocated in first chunk
685d382aafbSBarry Smith .  r2 - memory allocated in second chunk
686d382aafbSBarry Smith .  r3 - memory allocated in third chunk
687d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
688d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
689d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
690d382aafbSBarry Smith 
691d382aafbSBarry Smith    Level: developer
692d382aafbSBarry Smith 
693d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
694d382aafbSBarry Smith 
695d382aafbSBarry Smith   Concepts: memory allocation
696d382aafbSBarry Smith 
697d382aafbSBarry Smith M*/
698d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
699d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
700d382aafbSBarry Smith #else
701d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7023b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
703d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
704d382aafbSBarry Smith #endif
705d382aafbSBarry Smith 
706d382aafbSBarry Smith /*MC
707503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
708d382aafbSBarry Smith 
709eca87e8dSBarry Smith    Synopsis:
710eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
711eca87e8dSBarry Smith 
712eca87e8dSBarry Smith    Not Collective
713eca87e8dSBarry Smith 
714d382aafbSBarry Smith    Input Parameter:
715d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
716d382aafbSBarry Smith .  t1 - type of first memory elements
717d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
718d382aafbSBarry Smith .  t2 - type of second memory elements
719d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
720d382aafbSBarry Smith .  t3 - type of third memory elements
721d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
722d382aafbSBarry Smith .  t4 - type of fourth memory elements
723d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
724d382aafbSBarry Smith .  t5 - type of fifth memory elements
725d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
726d382aafbSBarry Smith .  t6 - type of sixth memory elements
727d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
728d382aafbSBarry Smith -  t7 - type of sixth memory elements
729d382aafbSBarry Smith 
730d382aafbSBarry Smith    Output Parameter:
731d382aafbSBarry Smith +  r1 - memory allocated in first chunk
732d382aafbSBarry Smith .  r2 - memory allocated in second chunk
733d382aafbSBarry Smith .  r3 - memory allocated in third chunk
734d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
735d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
736d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
737eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
738d382aafbSBarry Smith 
739d382aafbSBarry Smith    Level: developer
740d382aafbSBarry Smith 
741d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
742d382aafbSBarry Smith 
743d382aafbSBarry Smith   Concepts: memory allocation
744d382aafbSBarry Smith 
745d382aafbSBarry Smith M*/
746d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
747d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
748d382aafbSBarry Smith #else
749d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
7503b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
751d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
752d382aafbSBarry Smith #endif
753d382aafbSBarry Smith 
754d382aafbSBarry Smith /*MC
755503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
756d382aafbSBarry Smith 
757eca87e8dSBarry Smith    Synopsis:
758eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
759eca87e8dSBarry Smith 
760eca87e8dSBarry Smith    Not Collective
761eca87e8dSBarry Smith 
762d382aafbSBarry Smith    Input Parameter:
763d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
764d382aafbSBarry Smith 
765d382aafbSBarry Smith    Output Parameter:
766d382aafbSBarry Smith .  result - memory allocated
767d382aafbSBarry Smith 
768d382aafbSBarry Smith    Level: beginner
769d382aafbSBarry Smith 
770ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
771d382aafbSBarry Smith 
772d382aafbSBarry Smith   Concepts: memory allocation
773d382aafbSBarry Smith 
774d382aafbSBarry Smith M*/
775d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
776ad0619ddSBarry Smith 
777ad0619ddSBarry Smith /*MC
778ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
779ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
780ad0619ddSBarry Smith 
781ad0619ddSBarry Smith    Synopsis:
782ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
783ad0619ddSBarry Smith 
784ad0619ddSBarry Smith    Not Collective
785ad0619ddSBarry Smith 
786ad0619ddSBarry Smith    Input Parameter:
787ad0619ddSBarry Smith +  obj - object memory is logged to
788ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
789ad0619ddSBarry Smith 
790ad0619ddSBarry Smith    Output Parameter:
791ad0619ddSBarry Smith .  result - memory allocated
792ad0619ddSBarry Smith 
793ad0619ddSBarry Smith    Level: developer
794ad0619ddSBarry Smith 
795ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
796ad0619ddSBarry Smith 
797ad0619ddSBarry Smith   Concepts: memory allocation
798ad0619ddSBarry Smith 
799ad0619ddSBarry Smith M*/
800d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
801d382aafbSBarry Smith 
802d382aafbSBarry Smith /*MC
803d382aafbSBarry Smith    PetscFree - Frees memory
804d382aafbSBarry Smith 
805eca87e8dSBarry Smith    Synopsis:
806eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
807eca87e8dSBarry Smith 
808eca87e8dSBarry Smith    Not Collective
809eca87e8dSBarry Smith 
810d382aafbSBarry Smith    Input Parameter:
811d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
812d382aafbSBarry Smith 
813d382aafbSBarry Smith    Level: beginner
814d382aafbSBarry Smith 
815d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
816d382aafbSBarry Smith 
817d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
818d382aafbSBarry Smith 
819d382aafbSBarry Smith   Concepts: memory allocation
820d382aafbSBarry Smith 
821d382aafbSBarry Smith M*/
82212537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
823d382aafbSBarry Smith 
824d382aafbSBarry Smith /*MC
825d382aafbSBarry Smith    PetscFreeVoid - Frees memory
826d382aafbSBarry Smith 
827d382aafbSBarry Smith    Synopsis:
828d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
829d382aafbSBarry Smith 
830eca87e8dSBarry Smith    Not Collective
831eca87e8dSBarry Smith 
832eca87e8dSBarry Smith    Input Parameter:
833eca87e8dSBarry Smith .   memory - memory to free
834eca87e8dSBarry Smith 
835d382aafbSBarry Smith    Level: beginner
836d382aafbSBarry Smith 
837d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
838d382aafbSBarry Smith 
839d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
840d382aafbSBarry Smith 
841d382aafbSBarry Smith   Concepts: memory allocation
842d382aafbSBarry Smith 
843d382aafbSBarry Smith M*/
8442714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
845d382aafbSBarry Smith 
846d382aafbSBarry Smith 
847d382aafbSBarry Smith /*MC
848d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
849d382aafbSBarry Smith 
850eca87e8dSBarry Smith    Synopsis:
851eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
852eca87e8dSBarry Smith 
853eca87e8dSBarry Smith    Not Collective
854eca87e8dSBarry Smith 
855d382aafbSBarry Smith    Input Parameter:
856d382aafbSBarry Smith +   memory1 - memory to free
857d382aafbSBarry Smith -   memory2 - 2nd memory to free
858d382aafbSBarry Smith 
859d382aafbSBarry Smith    Level: developer
860d382aafbSBarry Smith 
861d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
862d382aafbSBarry Smith 
863d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
864d382aafbSBarry Smith 
865d382aafbSBarry Smith   Concepts: memory allocation
866d382aafbSBarry Smith 
867d382aafbSBarry Smith M*/
868d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
869d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
870d382aafbSBarry Smith #else
87181dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
872d382aafbSBarry Smith #endif
873d382aafbSBarry Smith 
874d382aafbSBarry Smith /*MC
875d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
876d382aafbSBarry Smith 
877eca87e8dSBarry Smith    Synopsis:
878eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
879eca87e8dSBarry Smith 
880eca87e8dSBarry Smith    Not Collective
881eca87e8dSBarry Smith 
882d382aafbSBarry Smith    Input Parameter:
883d382aafbSBarry Smith +   memory1 - memory to free
884d382aafbSBarry Smith .   memory2 - 2nd memory to free
885d382aafbSBarry Smith -   memory3 - 3rd memory to free
886d382aafbSBarry Smith 
887d382aafbSBarry Smith    Level: developer
888d382aafbSBarry Smith 
889d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
890d382aafbSBarry Smith 
891d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
892d382aafbSBarry Smith 
893d382aafbSBarry Smith   Concepts: memory allocation
894d382aafbSBarry Smith 
895d382aafbSBarry Smith M*/
896d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
897d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
898d382aafbSBarry Smith #else
89981dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
900d382aafbSBarry Smith #endif
901d382aafbSBarry Smith 
902d382aafbSBarry Smith /*MC
903d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
904d382aafbSBarry Smith 
905eca87e8dSBarry Smith    Synopsis:
906eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
907eca87e8dSBarry Smith 
908eca87e8dSBarry Smith    Not Collective
909eca87e8dSBarry Smith 
910d382aafbSBarry Smith    Input Parameter:
911d382aafbSBarry Smith +   m1 - memory to free
912d382aafbSBarry Smith .   m2 - 2nd memory to free
913d382aafbSBarry Smith .   m3 - 3rd memory to free
914d382aafbSBarry Smith -   m4 - 4th memory to free
915d382aafbSBarry Smith 
916d382aafbSBarry Smith    Level: developer
917d382aafbSBarry Smith 
918d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
919d382aafbSBarry Smith 
920d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
921d382aafbSBarry Smith 
922d382aafbSBarry Smith   Concepts: memory allocation
923d382aafbSBarry Smith 
924d382aafbSBarry Smith M*/
925d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
926d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
927d382aafbSBarry Smith #else
92881dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
929d382aafbSBarry Smith #endif
930d382aafbSBarry Smith 
931d382aafbSBarry Smith /*MC
932d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
933d382aafbSBarry Smith 
934eca87e8dSBarry Smith    Synopsis:
935eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
936eca87e8dSBarry Smith 
937eca87e8dSBarry Smith    Not Collective
938eca87e8dSBarry Smith 
939d382aafbSBarry Smith    Input Parameter:
940d382aafbSBarry Smith +   m1 - memory to free
941d382aafbSBarry Smith .   m2 - 2nd memory to free
942d382aafbSBarry Smith .   m3 - 3rd memory to free
943d382aafbSBarry Smith .   m4 - 4th memory to free
944d382aafbSBarry Smith -   m5 - 5th memory to free
945d382aafbSBarry Smith 
946d382aafbSBarry Smith    Level: developer
947d382aafbSBarry Smith 
948d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
949d382aafbSBarry Smith 
950d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
951d382aafbSBarry Smith 
952d382aafbSBarry Smith   Concepts: memory allocation
953d382aafbSBarry Smith 
954d382aafbSBarry Smith M*/
955d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
956d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
957d382aafbSBarry Smith #else
95881dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
959d382aafbSBarry Smith #endif
960d382aafbSBarry Smith 
961d382aafbSBarry Smith 
962d382aafbSBarry Smith /*MC
963d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
964d382aafbSBarry Smith 
965eca87e8dSBarry Smith    Synopsis:
966eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
967eca87e8dSBarry Smith 
968eca87e8dSBarry Smith    Not Collective
969eca87e8dSBarry Smith 
970d382aafbSBarry Smith    Input Parameter:
971d382aafbSBarry Smith +   m1 - memory to free
972d382aafbSBarry Smith .   m2 - 2nd memory to free
973d382aafbSBarry Smith .   m3 - 3rd memory to free
974d382aafbSBarry Smith .   m4 - 4th memory to free
975d382aafbSBarry Smith .   m5 - 5th memory to free
976d382aafbSBarry Smith -   m6 - 6th memory to free
977d382aafbSBarry Smith 
978d382aafbSBarry Smith 
979d382aafbSBarry Smith    Level: developer
980d382aafbSBarry Smith 
981d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
982d382aafbSBarry Smith 
983d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
984d382aafbSBarry Smith 
985d382aafbSBarry Smith   Concepts: memory allocation
986d382aafbSBarry Smith 
987d382aafbSBarry Smith M*/
988d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
989d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
990d382aafbSBarry Smith #else
99181dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
992d382aafbSBarry Smith #endif
993d382aafbSBarry Smith 
994d382aafbSBarry Smith /*MC
995d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
996d382aafbSBarry Smith 
997eca87e8dSBarry Smith    Synopsis:
998eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
999eca87e8dSBarry Smith 
1000eca87e8dSBarry Smith    Not Collective
1001eca87e8dSBarry Smith 
1002d382aafbSBarry Smith    Input Parameter:
1003d382aafbSBarry Smith +   m1 - memory to free
1004d382aafbSBarry Smith .   m2 - 2nd memory to free
1005d382aafbSBarry Smith .   m3 - 3rd memory to free
1006d382aafbSBarry Smith .   m4 - 4th memory to free
1007d382aafbSBarry Smith .   m5 - 5th memory to free
1008d382aafbSBarry Smith .   m6 - 6th memory to free
1009d382aafbSBarry Smith -   m7 - 7th memory to free
1010d382aafbSBarry Smith 
1011d382aafbSBarry Smith 
1012d382aafbSBarry Smith    Level: developer
1013d382aafbSBarry Smith 
1014d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1015d382aafbSBarry Smith 
1016d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1017d382aafbSBarry Smith           PetscMalloc7()
1018d382aafbSBarry Smith 
1019d382aafbSBarry Smith   Concepts: memory allocation
1020d382aafbSBarry Smith 
1021d382aafbSBarry Smith M*/
1022d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1023d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1024d382aafbSBarry Smith #else
102581dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1026d382aafbSBarry Smith #endif
1027d382aafbSBarry Smith 
1028014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
1029014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
1030014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
1031014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1032d382aafbSBarry Smith 
1033d382aafbSBarry Smith /*
1034a5057860SBarry Smith     PetscLogDouble variables are used to contain double precision numbers
1035a5057860SBarry Smith   that are not used in the numerical computations, but rather in logging,
1036a5057860SBarry Smith   timing etc.
1037a5057860SBarry Smith */
1038a5057860SBarry Smith typedef double PetscLogDouble;
1039a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1040a5057860SBarry Smith 
1041a5057860SBarry Smith /*
104266d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1043d382aafbSBarry Smith */
1044014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
1045014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *);
1046014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1047014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1048014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool);
1049014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]);
1050014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void);
1051574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble);
1052014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1053d382aafbSBarry Smith 
1054d382aafbSBarry Smith /*E
1055d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1056d382aafbSBarry Smith 
1057d382aafbSBarry Smith    Level: beginner
1058d382aafbSBarry Smith 
1059d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1060d382aafbSBarry Smith 
1061d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1062d382aafbSBarry Smith           PetscDataTypeGetSize()
1063d382aafbSBarry Smith 
1064d382aafbSBarry Smith E*/
1065d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
10662d53ad75SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;
10676a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[];
1068d382aafbSBarry Smith 
1069d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1070d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1071d382aafbSBarry Smith #else
1072ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1073d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
107459a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
107559a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1076d382aafbSBarry Smith #else
1077d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1078d382aafbSBarry Smith #endif
1079d382aafbSBarry Smith #endif
1080ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1081d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
108259a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
108359a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1084d382aafbSBarry Smith #else
1085d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1086d382aafbSBarry Smith #endif
1087d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1088d382aafbSBarry Smith 
1089014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1090014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1091014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
1092d382aafbSBarry Smith 
1093d382aafbSBarry Smith /*
1094d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1095d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1096d382aafbSBarry Smith    functionality and/or error checking.
1097d382aafbSBarry Smith */
1098014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
1099014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t);
1100014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
1101014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1102d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***);
1103014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1104014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool  *);
1105014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool  *);
1106014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1107014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1108014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1109014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1110014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t);
1111014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1112014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1113014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
11142f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]);
1115014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1116014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1118014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
11192c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*);
1120014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1121014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
112247340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***);
11236fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***);
1124014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1125d382aafbSBarry Smith 
1126d382aafbSBarry Smith /*S
1127d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1128d382aafbSBarry Smith 
1129d382aafbSBarry Smith   Level: intermediate
1130d382aafbSBarry Smith 
1131d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1132d382aafbSBarry Smith S*/
1133d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1134d382aafbSBarry Smith 
1135014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1138d382aafbSBarry Smith 
1139d382aafbSBarry Smith /*
1140d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1141d382aafbSBarry Smith */
1142014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op;
1143*7c2de775SJed Brown #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
1144014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM;
11452414b3c7SJed Brown #else
11462414b3c7SJed Brown #define MPIU_SUM MPI_SUM
11472414b3c7SJed Brown #endif
11482414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128)
1149014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX;
1150014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN;
1151d9822059SBarry Smith #else
1152d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1153d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1154d9822059SBarry Smith #endif
1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1156d382aafbSBarry Smith 
1157014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1158014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1159eb3f98d2SBarry Smith 
1160d382aafbSBarry Smith /*S
1161d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1162d382aafbSBarry Smith 
1163d382aafbSBarry Smith    Level: beginner
1164d382aafbSBarry Smith 
11652981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1166d382aafbSBarry Smith 
11671890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1168d382aafbSBarry Smith S*/
1169d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1170d382aafbSBarry Smith 
1171d382aafbSBarry Smith /*S
1172d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1173d382aafbSBarry Smith       by string name
1174d382aafbSBarry Smith 
1175d382aafbSBarry Smith    Level: advanced
1176d382aafbSBarry Smith 
11772981ebdbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy(), PetscOpFlist
1178d382aafbSBarry Smith S*/
1179d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1180d382aafbSBarry Smith 
1181e4d1774bSDmitry Karpeev /*S
1182e4d1774bSDmitry Karpeev      PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries,
1183e4d1774bSDmitry Karpeev                     accessed by string op name together with string argument types.
1184e4d1774bSDmitry Karpeev 
1185e4d1774bSDmitry Karpeev    Level: advanced
1186e4d1774bSDmitry Karpeev 
11872981ebdbSBarry Smith .seealso:  PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy()
1188e4d1774bSDmitry Karpeev S*/
1189e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList;
1190e4d1774bSDmitry Karpeev 
1191d382aafbSBarry Smith /*E
1192d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1193d382aafbSBarry Smith 
1194d382aafbSBarry Smith   Level: beginner
1195d382aafbSBarry Smith 
1196d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1197d382aafbSBarry Smith 
1198d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1199d382aafbSBarry Smith 
1200d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1201d382aafbSBarry Smith 
1202d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1203d382aafbSBarry Smith 
1204d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1205d382aafbSBarry Smith 
1206d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1207d382aafbSBarry Smith E*/
1208d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1209d382aafbSBarry Smith 
12102c8e378dSBarry Smith #include <petscviewer.h>
12112c8e378dSBarry Smith #include <petscoptions.h>
1212d382aafbSBarry Smith 
12130700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
1214014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1215014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1216014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1217d382aafbSBarry Smith 
1218d382aafbSBarry Smith /*
1219d382aafbSBarry Smith    Routines that get memory usage information from the OS
1220d382aafbSBarry Smith */
1221014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]);
1225d382aafbSBarry Smith 
1226014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []);
1227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*);
1228014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*);
1229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1230d382aafbSBarry Smith 
1231d382aafbSBarry Smith /*
1232d382aafbSBarry Smith    Initialization of PETSc
1233d382aafbSBarry Smith */
1234014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1244d382aafbSBarry Smith 
1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void);
1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]);
1247d382aafbSBarry Smith 
1248014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD;
1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt);
1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void);
1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*);
1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**);
1256d382aafbSBarry Smith 
1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1261d382aafbSBarry Smith 
1262d382aafbSBarry Smith /*
1263d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
12642981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1265d382aafbSBarry Smith */
1266638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);
1267638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);
1268638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1269d382aafbSBarry Smith 
1270d382aafbSBarry Smith /*
1271d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1272d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1273503cfb0cSBarry Smith 
1274503cfb0cSBarry Smith    Level: developer
1275503cfb0cSBarry Smith 
1276503cfb0cSBarry Smith .seealso: PetscUseMethod()
1277d382aafbSBarry Smith */
1278d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1279d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1280d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1281d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1282d382aafbSBarry Smith   }
1283503cfb0cSBarry Smith 
1284503cfb0cSBarry Smith /*
1285503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1286503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1287503cfb0cSBarry Smith 
1288503cfb0cSBarry Smith    Level: developer
1289503cfb0cSBarry Smith 
1290503cfb0cSBarry Smith .seealso: PetscTryMethod()
1291503cfb0cSBarry Smith */
1292d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1293d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1294d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1295d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1296703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1297d382aafbSBarry Smith   }
1298503cfb0cSBarry Smith 
1299d382aafbSBarry Smith /*
1300d382aafbSBarry Smith     Functions that can act on any PETSc object.
1301d382aafbSBarry Smith */
1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []);
1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision);
1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *);
1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject);
1329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject);
1330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
1331d382aafbSBarry Smith 
1332d382aafbSBarry Smith /*MC
1333d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1334d382aafbSBarry Smith 
1335eca87e8dSBarry Smith     Synopsis:
1336eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1337eca87e8dSBarry Smith 
1338ad4df100SBarry Smith    Logically Collective on PetscObject
1339d382aafbSBarry Smith 
1340d382aafbSBarry Smith    Input Parameters:
1341d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1342d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1343d382aafbSBarry Smith .  name - name associated with the child function
1344d382aafbSBarry Smith .  fname - name of the function
1345d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1346d382aafbSBarry Smith 
1347d382aafbSBarry Smith    Level: advanced
1348d382aafbSBarry Smith 
1349d382aafbSBarry Smith 
1350d382aafbSBarry Smith    Notes:
1351d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1352d382aafbSBarry Smith 
1353d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1354d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1355d382aafbSBarry Smith 
1356d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
135720de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1358d382aafbSBarry Smith    enabled.
1359d382aafbSBarry Smith 
1360d382aafbSBarry Smith    Concepts: objects^composing functions
1361d382aafbSBarry Smith    Concepts: composing functions
1362d382aafbSBarry Smith    Concepts: functions^querying
1363d382aafbSBarry Smith    Concepts: objects^querying
1364d382aafbSBarry Smith    Concepts: querying objects
1365d382aafbSBarry Smith 
1366d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1367d382aafbSBarry Smith M*/
1368d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1369d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1370d382aafbSBarry Smith #else
1371d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1372d382aafbSBarry Smith #endif
1373d382aafbSBarry Smith 
1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAMSPublish(PetscObject);
1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectUnPublish(PetscObject);
1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1389d382aafbSBarry Smith 
13907d5d4d99SBarry Smith typedef void* PetscDLHandle;
1391e4d177b5SBarry Smith typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;
1392e4d177b5SBarry Smith extern PetscErrorCode  PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *);
13937d5d4d99SBarry Smith extern PetscErrorCode  PetscDLClose(PetscDLHandle *);
13947d5d4d99SBarry Smith extern PetscErrorCode  PetscDLSym(PetscDLHandle,const char[],void **);
13957d5d4d99SBarry Smith 
1396d382aafbSBarry Smith /*
1397d382aafbSBarry Smith     Defines PETSc error handling.
1398d382aafbSBarry Smith */
13992c8e378dSBarry Smith #include <petscerror.h>
1400d382aafbSBarry Smith 
14015fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG)
1402a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**);
14035fe58b6fSBarry Smith #endif
14047eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool);
1405a64a8e02SBarry Smith 
1406d382aafbSBarry Smith /*S
1407503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1408d382aafbSBarry Smith 
14091d0fab5eSBarry Smith    Level: developer
1410d382aafbSBarry Smith 
14111d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14121d0fab5eSBarry Smith 
14132981ebdbSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList
1414d382aafbSBarry Smith S*/
1415d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1416d382aafbSBarry Smith 
1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDestroy(PetscOList*);
1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListFind(PetscOList,const char[],PetscObject*);
1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListAdd(PetscOList *,const char[],PetscObject);
1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListRemoveReference(PetscOList *,const char[]);
1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDuplicate(PetscOList,PetscOList *);
1423d382aafbSBarry Smith 
1424d382aafbSBarry Smith /*
1425503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1426d382aafbSBarry Smith   link libraries that will be loaded as needed.
1427d382aafbSBarry Smith */
1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDestroy(PetscFList*);
1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1432d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1433d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1434d382aafbSBarry Smith #else
1435d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1436d382aafbSBarry Smith #endif
1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDuplicate(PetscFList,PetscFList *);
1438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListView(PetscFList,PetscViewer);
1439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListConcat(const char [],const char [],char []);
1440065533a5SJed Brown PETSC_EXTERN PetscErrorCode PetscFListGet(PetscFList,const char ***,int*);
1441d382aafbSBarry Smith 
144248703020SDmitry Karpeev /*
144348703020SDmitry Karpeev     Multiple dispatch operation function lists. Lists of names of routines with corresponding
144448703020SDmitry Karpeev     argument type names with function pointers or in dynamic link libraries that will be loaded
144548703020SDmitry Karpeev     as needed.  Search on the op name and argument type names.
144648703020SDmitry Karpeev */
1447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]);
1448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListDestroy(PetscOpFList*);
1449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]);
1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListView(PetscOpFList,PetscViewer);
14512981ebdbSBarry Smith 
1452d382aafbSBarry Smith /*S
1453d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1454d382aafbSBarry Smith 
1455d382aafbSBarry Smith    Level: advanced
1456d382aafbSBarry Smith 
145720de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1458d382aafbSBarry Smith 
1459d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1460d382aafbSBarry Smith S*/
1461d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1462014dd563SJed Brown PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;
1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1470d382aafbSBarry Smith 
1471d382aafbSBarry Smith /*
1472a5a3d712SDmitry Karpeev   PetscShell support.  Needs to be better documented.
147305846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
147405846914SDmitry Karpeev */
14752c8e378dSBarry Smith #include <petscshell.h>
147605846914SDmitry Karpeev 
147705846914SDmitry Karpeev /*
1478d382aafbSBarry Smith      Useful utility routines
1479d382aafbSBarry Smith */
1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
1486d382aafbSBarry Smith 
1487503cfb0cSBarry Smith /*
1488ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1489503cfb0cSBarry Smith 
1490503cfb0cSBarry Smith     Notes: This is useful in cases like
1491503cfb0cSBarry Smith $     int        *a;
1492ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1493ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1494503cfb0cSBarry Smith */
1495d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1496503cfb0cSBarry Smith 
1497d382aafbSBarry Smith /*
1498d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1499d382aafbSBarry Smith */
15002c8e378dSBarry Smith #include <petscdraw.h>
1501d382aafbSBarry Smith 
1502cae2f346SBarry Smith #if defined(PETSC_HAVE_VALGRIND)
1503cae2f346SBarry Smith #  include <valgrind/valgrind.h>
1504cae2f346SBarry Smith #  define PETSC_RUNNING_ON_VALGRIND RUNNING_ON_VALGRIND
1505cae2f346SBarry Smith #else
1506cae2f346SBarry Smith #  define PETSC_RUNNING_ON_VALGRIND PETSC_FALSE
1507cae2f346SBarry Smith #endif
1508cae2f346SBarry Smith 
1509d382aafbSBarry Smith /*
1510d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1511d382aafbSBarry Smith */
15122c8e378dSBarry Smith #include <petsc-private/petscimpl.h>
1513503cfb0cSBarry Smith 
1514238ccf28SShri Abhyankar 
1515d382aafbSBarry Smith /*MC
1516d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1517d382aafbSBarry Smith 
1518d382aafbSBarry Smith    Synopsis:
1519d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1520d382aafbSBarry Smith 
1521eca87e8dSBarry Smith     Not Collective
1522eca87e8dSBarry Smith 
1523d382aafbSBarry Smith     Input Parameters:
1524d382aafbSBarry Smith .   format - the usual printf() format string
1525d382aafbSBarry Smith 
1526d382aafbSBarry Smith    Options Database Keys:
1527d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1528d382aafbSBarry Smith          (default) stderr
1529d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1530d382aafbSBarry Smith           error is handled.)
1531d382aafbSBarry Smith 
1532d382aafbSBarry Smith    Notes: Use
1533d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1534d382aafbSBarry Smith $                        error is handled.) and
1535d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1536c9a19010SBarry Smith $        of you can use your own function
1537d382aafbSBarry Smith 
1538d382aafbSBarry Smith           Use
1539d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1540d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1541d382aafbSBarry Smith 
1542d382aafbSBarry Smith           Use
1543d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1544d382aafbSBarry Smith 
1545d382aafbSBarry Smith    Level: developer
1546d382aafbSBarry Smith 
1547d382aafbSBarry Smith     Fortran Note:
1548d382aafbSBarry Smith     This routine is not supported in Fortran.
1549d382aafbSBarry Smith 
1550d382aafbSBarry Smith     Concepts: error messages^printing
1551d382aafbSBarry Smith     Concepts: printing^error messages
1552d382aafbSBarry Smith 
1553c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1554d382aafbSBarry Smith M*/
1555014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1556d382aafbSBarry Smith 
1557d382aafbSBarry Smith /*MC
1558d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1559d382aafbSBarry Smith 
1560d382aafbSBarry Smith    Synopsis:
1561d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1562d382aafbSBarry Smith 
1563eca87e8dSBarry Smith     Not Collective
1564eca87e8dSBarry Smith 
1565d382aafbSBarry Smith     Input Parameters:
1566d382aafbSBarry Smith .   format - the usual printf() format string
1567d382aafbSBarry Smith 
1568d382aafbSBarry Smith    Level: developer
1569d382aafbSBarry Smith 
1570d382aafbSBarry Smith     Fortran Note:
1571d382aafbSBarry Smith     This routine is not supported in Fortran.
1572d382aafbSBarry Smith 
1573d382aafbSBarry Smith     Concepts: help messages^printing
1574d382aafbSBarry Smith     Concepts: printing^help messages
1575d382aafbSBarry Smith 
1576d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1577d382aafbSBarry Smith M*/
1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1579d382aafbSBarry Smith 
1580fcfd50ebSBarry Smith /*
1581fcfd50ebSBarry Smith      Defines PETSc profiling.
1582fcfd50ebSBarry Smith */
15832c8e378dSBarry Smith #include <petsclog.h>
1584fcfd50ebSBarry Smith 
1585fcfd50ebSBarry Smith /*
1586fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1587fcfd50ebSBarry Smith */
1588fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1589014dd563SJed Brown PETSC_EXTERN PetscBool PetscAMSPublishAll;
1590fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1591fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1592fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1593fcfd50ebSBarry Smith #else
1594fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1595fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1596fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1597fcfd50ebSBarry Smith #endif
1598fcfd50ebSBarry Smith 
1599fcfd50ebSBarry Smith /*
1600fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1601fcfd50ebSBarry Smith */
1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
1605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...);
1607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...);
1608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1609fcfd50ebSBarry Smith 
1610fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1611fcfd50ebSBarry Smith #include <stdarg.h>
1612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list);
1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list);
1615fcfd50ebSBarry Smith 
1616fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1618fcfd50ebSBarry Smith #endif
1619fcfd50ebSBarry Smith 
1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...);
1621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...);
1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1623d382aafbSBarry Smith 
1624d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
1625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
1626784ad74dSJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,PetscInt*);
1627d382aafbSBarry Smith #endif
1628d382aafbSBarry Smith 
1629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...);
1630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
1631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm);
1632014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1633014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1634014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1636d382aafbSBarry Smith 
1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1638d382aafbSBarry Smith 
1639d382aafbSBarry Smith /*S
1640d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1641d382aafbSBarry Smith 
1642d382aafbSBarry Smith    Level: advanced
1643d382aafbSBarry Smith 
1644d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1645d382aafbSBarry Smith S*/
1646014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1647d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
1648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **);
1649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *);
1650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *);
1652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1653d382aafbSBarry Smith 
1654d382aafbSBarry Smith /*
1655d382aafbSBarry Smith    For use in debuggers
1656d382aafbSBarry Smith */
1657014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1658014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1660014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1662d382aafbSBarry Smith 
1663d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1664d382aafbSBarry Smith #include <memory.h>
1665d382aafbSBarry Smith #endif
1666d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1667d382aafbSBarry Smith #include <stdlib.h>
1668d382aafbSBarry Smith #endif
1669d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1670d382aafbSBarry Smith #include <strings.h>
1671d382aafbSBarry Smith #endif
1672d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1673d382aafbSBarry Smith #include <string.h>
1674d382aafbSBarry Smith #endif
16756c7e564aSBarry Smith 
16764a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1677d382aafbSBarry Smith #include <xmmintrin.h>
1678d382aafbSBarry Smith #endif
1679d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1680d382aafbSBarry Smith #include <stdint.h>
1681d382aafbSBarry Smith #endif
1682d382aafbSBarry Smith 
1683fcfd50ebSBarry Smith #undef __FUNCT__
1684fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1685d382aafbSBarry Smith /*@C
1686d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1687d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1688d382aafbSBarry Smith    PetscMemmove() in that case.
1689d382aafbSBarry Smith 
1690d382aafbSBarry Smith    Not Collective
1691d382aafbSBarry Smith 
1692d382aafbSBarry Smith    Input Parameters:
1693d382aafbSBarry Smith +  b - pointer to initial memory space
1694d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1695d382aafbSBarry Smith 
1696d382aafbSBarry Smith    Output Parameter:
1697d382aafbSBarry Smith .  a - pointer to copy space
1698d382aafbSBarry Smith 
1699d382aafbSBarry Smith    Level: intermediate
1700d382aafbSBarry Smith 
1701d382aafbSBarry Smith    Compile Option:
1702d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1703d382aafbSBarry Smith                                   for memory copies on double precision values.
1704d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1705d382aafbSBarry Smith                                   for memory copies on double precision values.
1706d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1707d382aafbSBarry Smith                                   for memory copies on double precision values.
1708d382aafbSBarry Smith 
1709d382aafbSBarry Smith    Note:
1710d382aafbSBarry Smith    This routine is analogous to memcpy().
1711d382aafbSBarry Smith 
1712503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1713503cfb0cSBarry Smith 
1714d382aafbSBarry Smith   Concepts: memory^copying
1715d382aafbSBarry Smith   Concepts: copying^memory
1716d382aafbSBarry Smith 
1717d382aafbSBarry Smith .seealso: PetscMemmove()
1718d382aafbSBarry Smith 
1719d382aafbSBarry Smith @*/
17207087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1721d382aafbSBarry Smith {
1722d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1723d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1724d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1725a7e36092SMatthew G Knepley   PetscFunctionBegin;
1726e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1727e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1728a7e36092SMatthew G Knepley #else
1729d382aafbSBarry Smith   PetscFunctionBegin;
1730a7e36092SMatthew G Knepley #endif
1731d382aafbSBarry Smith   if (a != b) {
1732d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1733e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1734d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1735d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1736d382aafbSBarry Smith #endif
1737d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1738d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1739d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1740d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1741d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1742d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1743d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1744d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1745d382aafbSBarry Smith #else
1746d382aafbSBarry Smith       size_t      i;
1747d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1748d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1749d382aafbSBarry Smith #endif
1750d382aafbSBarry Smith     } else {
1751d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1752d382aafbSBarry Smith     }
1753d382aafbSBarry Smith #else
1754d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1755d382aafbSBarry Smith #endif
1756d382aafbSBarry Smith   }
1757d382aafbSBarry Smith   PetscFunctionReturn(0);
1758d382aafbSBarry Smith }
1759d382aafbSBarry Smith 
1760d382aafbSBarry Smith /*@C
1761d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1762d382aafbSBarry Smith 
1763d382aafbSBarry Smith    Not Collective
1764d382aafbSBarry Smith 
1765d382aafbSBarry Smith    Input Parameters:
1766d382aafbSBarry Smith +  a - pointer to beginning memory location
1767d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1768d382aafbSBarry Smith 
1769d382aafbSBarry Smith    Level: intermediate
1770d382aafbSBarry Smith 
1771d382aafbSBarry Smith    Compile Option:
1772d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1773d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1774d382aafbSBarry Smith 
1775503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1776503cfb0cSBarry Smith 
1777d382aafbSBarry Smith    Concepts: memory^zeroing
1778d382aafbSBarry Smith    Concepts: zeroing^memory
1779d382aafbSBarry Smith 
1780d382aafbSBarry Smith .seealso: PetscMemcpy()
1781d382aafbSBarry Smith @*/
17827087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1783d382aafbSBarry Smith {
1784d382aafbSBarry Smith   if (n > 0) {
1785d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1786e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1787d382aafbSBarry Smith #endif
1788d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1789d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1790d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1791d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1792d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1793d382aafbSBarry Smith     } else {
1794d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1795d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1796d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1797d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1798d382aafbSBarry Smith     } else {
1799d382aafbSBarry Smith #endif
1800d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1801d382aafbSBarry Smith       bzero((char *)a,n);
1802d382aafbSBarry Smith #else
1803d382aafbSBarry Smith       memset((char*)a,0,n);
1804d382aafbSBarry Smith #endif
1805d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1806d382aafbSBarry Smith     }
1807d382aafbSBarry Smith #endif
1808d382aafbSBarry Smith   }
1809d382aafbSBarry Smith   return 0;
1810d382aafbSBarry Smith }
1811d382aafbSBarry Smith 
1812d382aafbSBarry Smith /*MC
1813d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1814d382aafbSBarry Smith 
1815eca87e8dSBarry Smith    Synopsis:
1816eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1817eca87e8dSBarry Smith 
1818d382aafbSBarry Smith    Not Collective
1819d382aafbSBarry Smith 
1820d382aafbSBarry Smith    Input Parameters:
1821d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1822d382aafbSBarry Smith .  n - number of elements to fetch
1823d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
182450d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1825d382aafbSBarry Smith 
1826d382aafbSBarry Smith    Level: developer
1827d382aafbSBarry Smith 
1828d382aafbSBarry Smith    Notes:
1829d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1830d382aafbSBarry Smith 
183150d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
183250d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
183350d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
183463cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
183563cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
183663cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1837d382aafbSBarry Smith 
1838d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1839d382aafbSBarry Smith    address).
1840d382aafbSBarry Smith 
1841d382aafbSBarry Smith    Concepts: memory
1842d382aafbSBarry Smith M*/
1843d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1844d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1845d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1846d382aafbSBarry Smith   } while (0)
1847d382aafbSBarry Smith 
1848d382aafbSBarry Smith /*
1849e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1850d382aafbSBarry Smith */
18512c8e378dSBarry Smith #include <petscmatlab.h>
1852d382aafbSBarry Smith 
1853d382aafbSBarry Smith /*
1854d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1855d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1856d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1857d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1858e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1859d382aafbSBarry Smith */
1860d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1861d382aafbSBarry Smith 
1862d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1863d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1864d382aafbSBarry Smith #endif
1865d382aafbSBarry Smith 
18665a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18675a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1868d382aafbSBarry Smith #endif
1869d382aafbSBarry Smith 
1870d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1871d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1872d382aafbSBarry Smith #endif
1873d382aafbSBarry Smith 
1874d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1875d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1876d382aafbSBarry Smith #endif
1877d382aafbSBarry Smith 
1878d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1879d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1880d382aafbSBarry Smith #endif
1881d382aafbSBarry Smith 
1882d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1883d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1884d382aafbSBarry Smith #endif
1885d382aafbSBarry Smith 
1886d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1887d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1888d382aafbSBarry Smith #endif
1889d382aafbSBarry Smith 
1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1892d382aafbSBarry Smith #endif
1893d382aafbSBarry Smith 
1894d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1895d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1896d382aafbSBarry Smith #endif
1897d382aafbSBarry Smith 
1898d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1899d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1900d382aafbSBarry Smith #endif
1901d382aafbSBarry Smith 
1902d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1903d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1904d382aafbSBarry Smith #endif
1905d382aafbSBarry Smith 
1906d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1907d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1908d382aafbSBarry Smith #endif
1909d382aafbSBarry Smith 
1910d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1911d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1912d382aafbSBarry Smith #endif
1913d382aafbSBarry Smith 
1914d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1915d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1916d382aafbSBarry Smith #endif
1917d382aafbSBarry Smith 
1918d382aafbSBarry Smith #endif
1919d382aafbSBarry Smith 
1920d382aafbSBarry Smith /*
1921d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1922d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1923d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1924d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1925d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1926d382aafbSBarry Smith */
1927d382aafbSBarry Smith #if defined(__cplusplus)
1928014dd563SJed Brown #define PETSC_EXTERN_C extern "C" PETSC_VISIBILITY_PUBLIC
1929d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1930d382aafbSBarry Smith #define EXTERN_C_END }
1931d382aafbSBarry Smith #else
1932014dd563SJed Brown #define PETSC_EXTERN_C PETSC_EXTERN
1933d382aafbSBarry Smith #define EXTERN_C_BEGIN
1934d382aafbSBarry Smith #define EXTERN_C_END
1935d382aafbSBarry Smith #endif
1936d382aafbSBarry Smith 
1937d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1938d382aafbSBarry Smith 
1939d382aafbSBarry Smith /*MC
1940d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1941d382aafbSBarry Smith         communication
1942d382aafbSBarry Smith 
1943d382aafbSBarry Smith    Level: beginner
1944d382aafbSBarry Smith 
1945d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1946d382aafbSBarry Smith 
1947d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1948d382aafbSBarry Smith M*/
1949d382aafbSBarry Smith 
1950d382aafbSBarry Smith /*MC
1951d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1952d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1953d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1954d382aafbSBarry Smith 
1955d382aafbSBarry Smith 
1956d382aafbSBarry Smith    Level: beginner
1957d382aafbSBarry Smith 
1958d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1959d382aafbSBarry Smith M*/
1960d382aafbSBarry Smith 
1961d382aafbSBarry Smith /*MC
1962d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1963d382aafbSBarry Smith 
1964d382aafbSBarry Smith    Level: beginner
1965d382aafbSBarry Smith 
1966d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1967d382aafbSBarry Smith M*/
1968d382aafbSBarry Smith 
1969d382aafbSBarry Smith /*MC
1970d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1971d382aafbSBarry Smith    Level: beginner
1972d382aafbSBarry Smith 
1973d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1974d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1975d382aafbSBarry Smith 
1976d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1977d382aafbSBarry Smith M*/
1978d382aafbSBarry Smith 
1979d382aafbSBarry Smith /*MC
1980d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
1981d382aafbSBarry Smith 
1982d382aafbSBarry Smith    Level: beginner
1983d382aafbSBarry Smith 
1984d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
1985d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1986d382aafbSBarry Smith 
1987d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
1988d382aafbSBarry Smith M*/
1989d382aafbSBarry Smith 
1990d382aafbSBarry Smith /*MC
1991d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
1992d382aafbSBarry Smith 
1993d382aafbSBarry Smith    Level: beginner
1994d382aafbSBarry Smith 
1995d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
1996d382aafbSBarry Smith           pass this value
1997d382aafbSBarry Smith 
1998d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
1999d382aafbSBarry Smith M*/
2000d382aafbSBarry Smith 
2001d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2002d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2003014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2004014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2005d382aafbSBarry Smith #else
2006d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2007d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2008d382aafbSBarry Smith #endif
2009d382aafbSBarry Smith #endif
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2012d382aafbSBarry Smith 
2013d382aafbSBarry Smith /* Limit MPI to 32-bits */
2014d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2015d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2016d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2017d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2018d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2019d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2020d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2021d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2022d382aafbSBarry Smith 
2023d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2024e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2025e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2026eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2027eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2028d382aafbSBarry Smith 
2029d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2030e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2031eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2032d382aafbSBarry Smith #else
2033d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2034d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2035d382aafbSBarry Smith #endif
2036d382aafbSBarry Smith 
2037d382aafbSBarry Smith #else
2038d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2039d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2040d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2041d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2042d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2043d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2044d382aafbSBarry Smith #endif
2045d382aafbSBarry Smith 
2046d382aafbSBarry Smith /*
20472981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2048d382aafbSBarry Smith */
2049d382aafbSBarry Smith #if defined(hz)
2050d382aafbSBarry Smith #undef hz
2051d382aafbSBarry Smith #endif
2052d382aafbSBarry Smith 
2053d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2054d382aafbSBarry Smith 
2055d382aafbSBarry Smith 
2056d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2057d382aafbSBarry Smith #include <limits.h>
2058d382aafbSBarry Smith #endif
2059d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2060d382aafbSBarry Smith #include <sys/param.h>
2061d382aafbSBarry Smith #endif
2062d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2063d382aafbSBarry Smith #include <sys/types.h>
2064d382aafbSBarry Smith #endif
2065d382aafbSBarry Smith #if defined(MAXPATHLEN)
2066d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2067d382aafbSBarry Smith #elif defined(MAX_PATH)
2068d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2069d382aafbSBarry Smith #elif defined(_MAX_PATH)
2070d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2071d382aafbSBarry Smith #else
2072d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2073d382aafbSBarry Smith #endif
2074d382aafbSBarry Smith 
2075d382aafbSBarry Smith /* Special support for C++ */
20762c8e378dSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX)
20772c8e378dSBarry Smith #include <petscsys.hh>
20782c8e378dSBarry Smith #endif
20796c7e564aSBarry Smith 
2080d382aafbSBarry Smith /*MC
2081d382aafbSBarry Smith 
2082d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2083d382aafbSBarry Smith 
2084d382aafbSBarry Smith $    1) classic Fortran 77 style
2085d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2086d382aafbSBarry Smith $       XXX variablename
2087d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2088d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2089d382aafbSBarry Smith $
2090d382aafbSBarry Smith $    2) classic Fortran 90 style
2091d1716517SSatish Balay $#include "finclude/petscXXX.h"
2092d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2093d382aafbSBarry Smith $       XXX variablename
2094d382aafbSBarry Smith $
2095d382aafbSBarry Smith $    3) Using Fortran modules
2096d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2097d382aafbSBarry Smith $         use petscXXXX
2098d382aafbSBarry Smith $       XXX variablename
2099d382aafbSBarry Smith $
2100d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2101d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2102d382aafbSBarry Smith $         use petscXXXX
2103d382aafbSBarry Smith $       type(XXX) variablename
2104e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2105d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2106d382aafbSBarry Smith 
2107d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2108d382aafbSBarry Smith 
2109d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2110d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2111d382aafbSBarry Smith $        integer variablename
2112d382aafbSBarry Smith $
2113d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2114d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2115d382aafbSBarry Smith 
2116d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2117d382aafbSBarry Smith for only a few PETSc functions.
2118d382aafbSBarry Smith 
2119d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2120d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2121d382aafbSBarry Smith you cannot have something like
2122d382aafbSBarry Smith $      PetscInt row,col
2123d382aafbSBarry Smith $      PetscScalar val
2124d382aafbSBarry Smith $        ...
2125d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2126d382aafbSBarry Smith You must instead have
2127d382aafbSBarry Smith $      PetscInt row(1),col(1)
2128d382aafbSBarry Smith $      PetscScalar val(1)
2129d382aafbSBarry Smith $        ...
2130d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2131d382aafbSBarry Smith 
2132d382aafbSBarry Smith 
2133d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2134d382aafbSBarry Smith 
2135d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2136d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2137d382aafbSBarry Smith 
2138d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2139d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2140d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2141d382aafbSBarry Smith 
2142d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2143e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2144d382aafbSBarry Smith 
2145d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2146d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2147d382aafbSBarry Smith 
2148d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2149d382aafbSBarry Smith      automatically by "make allfortranstubs".
2150d382aafbSBarry Smith 
2151e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2152d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2153d382aafbSBarry Smith      include their predecessors
2154d382aafbSBarry Smith 
2155d382aafbSBarry Smith     Level: beginner
2156d382aafbSBarry Smith 
2157d382aafbSBarry Smith M*/
2158d382aafbSBarry Smith 
2159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2164014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
216527710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t);
2166d382aafbSBarry Smith 
2167014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2168014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
216960e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*);
2170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2172014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
217417d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]);
217517d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]);
2176014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
2177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
2178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
2179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2180014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2181014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2184d382aafbSBarry Smith 
2185014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2187d382aafbSBarry Smith 
218876bdecfbSBarry Smith /*J
2189d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2190d382aafbSBarry Smith        with an optional dynamic library name, for example
2191d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2192d382aafbSBarry Smith 
2193d382aafbSBarry Smith    Level: beginner
2194d382aafbSBarry Smith 
2195e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2196d382aafbSBarry Smith    with the option --download-sprng
2197d382aafbSBarry Smith 
2198d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
219976bdecfbSBarry Smith J*/
220019fd82e9SBarry Smith typedef const char* PetscRandomType;
2201d382aafbSBarry Smith #define PETSCRAND       "rand"
2202d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2203d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2204d382aafbSBarry Smith 
2205d382aafbSBarry Smith /* Logging support */
2206014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2207d382aafbSBarry Smith 
2208014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]);
2209d382aafbSBarry Smith 
2210d382aafbSBarry Smith /*S
2211d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2212d382aafbSBarry Smith 
2213d382aafbSBarry Smith    Level: intermediate
2214d382aafbSBarry Smith 
2215d382aafbSBarry Smith   Concepts: random numbers
2216d382aafbSBarry Smith 
2217d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2218d382aafbSBarry Smith S*/
2219d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2220d382aafbSBarry Smith 
2221d382aafbSBarry Smith /* Dynamic creation and loading functions */
2222014dd563SJed Brown PETSC_EXTERN PetscFList PetscRandomList;
2223014dd563SJed Brown PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled;
2224d382aafbSBarry Smith 
2225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []);
2226014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
2227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void);
222819fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType);
2229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
223019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*);
22316d187b91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,const char[]);
2232014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2233d382aafbSBarry Smith 
2234d382aafbSBarry Smith /*MC
2235d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2236d382aafbSBarry Smith 
2237d382aafbSBarry Smith   Synopsis:
22381890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2239d382aafbSBarry Smith 
2240d382aafbSBarry Smith   Not Collective
2241d382aafbSBarry Smith 
2242d382aafbSBarry Smith   Input Parameters:
2243d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2244d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2245d382aafbSBarry Smith . func_name   - The name of routine to create method context
2246d382aafbSBarry Smith - create_func - The creation routine itself
2247d382aafbSBarry Smith 
2248d382aafbSBarry Smith   Notes:
2249d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2250d382aafbSBarry Smith 
2251d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2252d382aafbSBarry Smith 
2253d382aafbSBarry Smith   Sample usage:
2254d382aafbSBarry Smith .vb
2255d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2256d382aafbSBarry Smith .ve
2257d382aafbSBarry Smith 
2258d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2259d382aafbSBarry Smith .vb
2260d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2261d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2262d382aafbSBarry Smith .ve
2263d382aafbSBarry Smith    or at runtime via the option
2264d382aafbSBarry Smith .vb
2265d382aafbSBarry Smith     -random_type my_random_name
2266d382aafbSBarry Smith .ve
2267d382aafbSBarry Smith 
2268d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2269d382aafbSBarry Smith 
2270d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2271d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2272d382aafbSBarry Smith 
2273d382aafbSBarry Smith   Level: advanced
2274d382aafbSBarry Smith 
2275d382aafbSBarry Smith .keywords: PetscRandom, register
2276d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2277d382aafbSBarry Smith M*/
2278d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2279d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2280d382aafbSBarry Smith #else
2281d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2282d382aafbSBarry Smith #endif
2283d382aafbSBarry Smith 
2284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2293d382aafbSBarry Smith 
2294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
2301d382aafbSBarry Smith 
2302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType);
2303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
2304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
2305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
2306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool  *);
2309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
2310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*);
2314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int);
2315d382aafbSBarry Smith 
2316d382aafbSBarry Smith /*
2317d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2318d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2319d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2320d382aafbSBarry Smith   PetscBinarySeek().
2321d382aafbSBarry Smith */
2322d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2323d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2324d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2325d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2326d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2327d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2328d382aafbSBarry Smith 
2329d382aafbSBarry Smith /*E
2330d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2331d382aafbSBarry Smith 
2332d382aafbSBarry Smith   Level: advanced
2333d382aafbSBarry Smith 
2334d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2335d382aafbSBarry Smith E*/
2336d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
2337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2340d382aafbSBarry Smith 
2341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool );
2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
2347d382aafbSBarry Smith 
2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2353d382aafbSBarry Smith 
2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2355d382aafbSBarry Smith 
2356d382aafbSBarry Smith /*E
2357d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2358d382aafbSBarry Smith 
2359d382aafbSBarry Smith   Level: beginner
2360d382aafbSBarry Smith 
2361d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2362d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2363d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2364d382aafbSBarry Smith E*/
23656fbadbe2SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;
2366d382aafbSBarry Smith 
2367d382aafbSBarry Smith /*MC
2368d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2369d382aafbSBarry Smith 
2370d382aafbSBarry Smith     Level: beginner
2371d382aafbSBarry Smith 
2372d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2373eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2374eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2375d382aafbSBarry Smith 
2376d382aafbSBarry Smith M*/
2377d382aafbSBarry Smith 
2378d382aafbSBarry Smith /*MC
2379d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2380d382aafbSBarry Smith                 value into that location
2381d382aafbSBarry Smith 
2382d382aafbSBarry Smith     Level: beginner
2383d382aafbSBarry Smith 
2384d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2385eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2386eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2387d382aafbSBarry Smith 
2388d382aafbSBarry Smith M*/
2389d382aafbSBarry Smith 
2390d382aafbSBarry Smith /*MC
2391d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2392d382aafbSBarry Smith 
2393d382aafbSBarry Smith     Level: beginner
2394d382aafbSBarry Smith 
2395d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2396d382aafbSBarry Smith 
2397d382aafbSBarry Smith M*/
2398d382aafbSBarry Smith 
2399d382aafbSBarry Smith /*S
2400d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2401d382aafbSBarry Smith 
2402d382aafbSBarry Smith    Level: advanced
2403d382aafbSBarry Smith 
2404d382aafbSBarry Smith    Concepts: communicator, create
2405d382aafbSBarry Smith S*/
2406d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2407d382aafbSBarry Smith 
2408d382aafbSBarry Smith struct _n_PetscSubcomm {
2409d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2410d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2411d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2412d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2413d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2414d382aafbSBarry Smith };
2415d382aafbSBarry Smith 
2416638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
24176a6fc655SJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[];
2418638faf0bSHong Zhang 
2419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
2423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2424d382aafbSBarry Smith 
242582a7e548SBarry Smith #include <petscctable.h>
242682a7e548SBarry Smith 
24276c7e564aSBarry Smith 
24289e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24299e03d832SJed Brown #undef __FUNCT__
24309e03d832SJed Brown #define __FUNCT__ "User provided function"
24319e03d832SJed Brown 
2432cae2f346SBarry Smith 
2433d382aafbSBarry Smith #endif
2434