1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith # endif 25216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith # define _BSD_SOURCE 2773fca5a0SBarry Smith # endif 2807f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay # define _DEFAULT_SOURCE 3007f00807SSatish Balay # endif 31ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar # define _GNU_SOURCE 33ea0fecefSShri Abhyankar # endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36df4397b0SStefano Zampini #include <petscsystypes.h> 37df4397b0SStefano Zampini 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 402c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 41d382aafbSBarry Smith */ 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48c5e4d11fSDmitry Karpeev /* ========================================================================== */ 49c5e4d11fSDmitry Karpeev /* 50c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 511cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 521cc8b206SBarry Smith file within an extern "C". 53c5e4d11fSDmitry Karpeev */ 54c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 55c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 56c5e4d11fSDmitry Karpeev #endif 57c5e4d11fSDmitry Karpeev 58ed938b00SJed Brown #if defined(__cplusplus) 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 60ed938b00SJed Brown #else 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 62ed938b00SJed Brown #endif 63ed938b00SJed Brown 64ed938b00SJed Brown #if defined(__cplusplus) 6558c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 66ed938b00SJed Brown #else 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 7058c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7158c433abSLisandro Dalcin 72ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 73014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 74014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7726703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7826703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7926703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 81014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 82014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 84d382aafbSBarry Smith #else 85014dd563SJed Brown # define PETSC_DLLEXPORT 86014dd563SJed Brown # define PETSC_DLLIMPORT 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 88014dd563SJed Brown #endif 89014dd563SJed Brown 90014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 91014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 92014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 94014dd563SJed Brown #endif 95014dd563SJed Brown 961cc8b206SBarry Smith /* 971cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 981cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 991cc8b206SBarry Smith used from C and are always visible in the shared libraries 1001cc8b206SBarry Smith */ 1012c280183SJed Brown #if defined(__cplusplus) 102014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 103638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10421f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 105014dd563SJed Brown #else 106014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1086258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 109d382aafbSBarry Smith #endif 11027710113SBarry Smith 1112c8e378dSBarry Smith #include <petscversion.h> 112a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 113d382aafbSBarry Smith 114d382aafbSBarry Smith /* ========================================================================== */ 115d382aafbSBarry Smith 116d382aafbSBarry Smith /* 117d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 118d382aafbSBarry Smith 119d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 120d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 121d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 122d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 123d382aafbSBarry Smith mpicxx.h directly in their code 124d382aafbSBarry Smith */ 125fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 126d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 127fa9e63e2SJed Brown #endif 128fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 129d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 130fa9e63e2SJed Brown #endif 131e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 132e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 133e771154cSJed Brown #else 1342c8e378dSBarry Smith # include <mpi.h> 135e771154cSJed Brown #endif 13665013866SBarry Smith 137d382aafbSBarry Smith /* 138a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 139a7886beaSBarry Smith This usually happens because 140a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 141a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 142a7886beaSBarry Smith */ 143a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 144a7886beaSBarry Smith # if !defined(__MPIUNI_H) 145a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 146a7886beaSBarry Smith # endif 14741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 14841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 14941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 15041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 15141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 15241f4af4cSSatish Balay # endif 15341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 15441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 15541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 15641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 15741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 15841f4af4cSSatish Balay # endif 159a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 16041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 161a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 162ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 163a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 164a7886beaSBarry Smith # endif 165a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 166a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 167a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 168ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 169c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 170a7886beaSBarry Smith # endif 17141f4af4cSSatish Balay #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) 17241f4af4cSSatish Balay # error "PETSc was configured with undetermined MPI - but now appears to be compiling using either of OpenMPI or a MPICH variant" 173a7886beaSBarry Smith #endif 174a7886beaSBarry Smith 175a7886beaSBarry Smith /* 1762981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 177d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 178d382aafbSBarry Smith */ 179d382aafbSBarry Smith #include <stdio.h> 180d382aafbSBarry Smith 181d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 182d382aafbSBarry Smith #if !defined(MPIAPI) 183d382aafbSBarry Smith #define MPIAPI 184d382aafbSBarry Smith #endif 185d382aafbSBarry Smith 1861cc8b206SBarry Smith /* 1871cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1881cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1891cc8b206SBarry Smith does not match the actual type of the argument being passed in 1901cc8b206SBarry Smith */ 191c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 192894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 193894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1948ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1958ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 196894dd566SJed Brown # endif 197894dd566SJed Brown #endif 198894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 199894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2008ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2018ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 202894dd566SJed Brown #endif 203b3506946SBarry Smith 2045a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 205df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 206e28ce29aSPatrick Sanan 207e28ce29aSPatrick Sanan /*MC 208e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 209e28ce29aSPatrick Sanan 210e28ce29aSPatrick Sanan Notes: 211e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 212e28ce29aSPatrick Sanan 213e28ce29aSPatrick Sanan Level: beginner 214e28ce29aSPatrick Sanan 215e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 216e28ce29aSPatrick Sanan M*/ 217e28ce29aSPatrick Sanan 21837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 219bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 220a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 221fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 222bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 223a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 224f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 225bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 226a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 227236ed0a3SSatish Balay #else 228bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 229236ed0a3SSatish Balay #endif 230b7b8f77aSBarry Smith 231*7cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 232b7b8f77aSBarry Smith 233d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 234bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 235a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 236d382aafbSBarry Smith #else 237d382aafbSBarry Smith # define MPIU_INT MPI_INT 238a05e1a72SSatish Balay # define PetscInt_FMT "d" 239d382aafbSBarry Smith #endif 240d382aafbSBarry Smith 241503cfb0cSBarry Smith /* 242503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 243503cfb0cSBarry Smith */ 244d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 245adcec1e5SJed Brown # define MPIU_SIZE_T MPI_UNSIGNED 246d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 247adcec1e5SJed Brown # define MPIU_SIZE_T MPI_UNSIGNED_LONG 248d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 249adcec1e5SJed Brown # define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG 250d382aafbSBarry Smith #else 251d382aafbSBarry Smith # error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 252d382aafbSBarry Smith #endif 253d382aafbSBarry Smith 254d382aafbSBarry Smith /* 255d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 256d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 257d382aafbSBarry Smith */ 258014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 259d382aafbSBarry Smith 260d382aafbSBarry Smith /* 261d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 262d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 263d382aafbSBarry Smith */ 264014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 265d382aafbSBarry Smith 266d382aafbSBarry Smith /*MC 267d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 268d382aafbSBarry Smith 269d382aafbSBarry Smith Synopsis: 270aaa7dc30SBarry Smith #include <petscsys.h> 271ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 272d382aafbSBarry Smith 273eca87e8dSBarry Smith Not Collective 274eca87e8dSBarry Smith 275d382aafbSBarry Smith Input Parameters: 276d382aafbSBarry Smith . cond - condition or expression 277d382aafbSBarry Smith 278e28ce29aSPatrick Sanan Notes: 279e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 280d382aafbSBarry Smith branch is unlikely. 281d382aafbSBarry Smith 282d382aafbSBarry Smith Level: advanced 283d382aafbSBarry Smith 284d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 285d382aafbSBarry Smith M*/ 286d382aafbSBarry Smith 287d382aafbSBarry Smith /*MC 288d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 289d382aafbSBarry Smith 290d382aafbSBarry Smith Synopsis: 291aaa7dc30SBarry Smith #include <petscsys.h> 29223072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 293d382aafbSBarry Smith 294eca87e8dSBarry Smith Not Collective 295eca87e8dSBarry Smith 296d382aafbSBarry Smith Input Parameters: 297d382aafbSBarry Smith . cond - condition or expression 298d382aafbSBarry Smith 299e28ce29aSPatrick Sanan Notes: 300e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 301d382aafbSBarry Smith branch is likely. 302d382aafbSBarry Smith 303d382aafbSBarry Smith Level: advanced 304d382aafbSBarry Smith 305d382aafbSBarry Smith .seealso: PetscUnlikely() 306d382aafbSBarry Smith M*/ 307d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 308d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 309d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 310d382aafbSBarry Smith #else 311cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 312cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 313d382aafbSBarry Smith #endif 314d382aafbSBarry Smith 315d382aafbSBarry Smith /* 316d382aafbSBarry Smith Declare extern C stuff after including external header files 317d382aafbSBarry Smith */ 318d382aafbSBarry Smith 3196a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 32070b3c8c7SBarry Smith 3218b49ba18SBarry Smith /* 322390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 3238b49ba18SBarry Smith */ 3248b49ba18SBarry Smith #include <petscmath.h> 3258b49ba18SBarry Smith 3266a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 327d382aafbSBarry Smith 328d382aafbSBarry Smith /*MC 3290298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 330d382aafbSBarry Smith 331d382aafbSBarry Smith Level: beginner 332d382aafbSBarry Smith 333e28ce29aSPatrick Sanan Note: 334e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 335d382aafbSBarry Smith some default 336d382aafbSBarry Smith 337e28ce29aSPatrick Sanan Fortran Notes: 338e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 339d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 340d382aafbSBarry Smith 341e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 342d382aafbSBarry Smith 343d382aafbSBarry Smith M*/ 3440298fd71SBarry Smith #define PETSC_IGNORE NULL 345d382aafbSBarry Smith 346c528d872SBarry Smith /* This is deprecated */ 347c528d872SBarry Smith #define PETSC_NULL NULL 348c528d872SBarry Smith 349d382aafbSBarry Smith /*MC 350557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 351557d4da8SBarry Smith where you wish PETSc to use the default. 352557d4da8SBarry Smith 353557d4da8SBarry Smith Level: beginner 354557d4da8SBarry Smith 355e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 356557d4da8SBarry Smith 357557d4da8SBarry Smith M*/ 358557d4da8SBarry Smith #define PETSC_DECIDE -1 359557d4da8SBarry Smith 360557d4da8SBarry Smith /*MC 361d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 362d382aafbSBarry Smith where you wish PETSc to compute the required value. 363d382aafbSBarry Smith 364d382aafbSBarry Smith Level: beginner 365d382aafbSBarry Smith 366e28ce29aSPatrick Sanan Developer Note: 367e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 368557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 369557d4da8SBarry Smith 3700298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 371d382aafbSBarry Smith 372d382aafbSBarry Smith M*/ 373d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 374d382aafbSBarry Smith 375d382aafbSBarry Smith /*MC 376557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 377557d4da8SBarry Smith where you wish PETSc to use the default. 378557d4da8SBarry Smith 379557d4da8SBarry Smith Level: beginner 380557d4da8SBarry Smith 381e28ce29aSPatrick Sanan Fortran Notes: 382e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 383557d4da8SBarry Smith 3840298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 385557d4da8SBarry Smith 386557d4da8SBarry Smith M*/ 387557d4da8SBarry Smith #define PETSC_DEFAULT -2 388557d4da8SBarry Smith 389557d4da8SBarry Smith /*MC 390d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 391ea8fe74dSBarry Smith all the processes that PETSc knows about. 392d382aafbSBarry Smith 393d382aafbSBarry Smith Level: beginner 394d382aafbSBarry Smith 395e28ce29aSPatrick Sanan Notes: 396e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 397d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 398d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 399a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 400a990b902SBarry Smith 401a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 402a990b902SBarry Smith is called because it may not have a valid value yet. 403d382aafbSBarry Smith 404d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 405d382aafbSBarry Smith 406d382aafbSBarry Smith M*/ 407014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 408d382aafbSBarry Smith 409d382aafbSBarry Smith /*MC 410503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 411d382aafbSBarry Smith 412d382aafbSBarry Smith Level: beginner 413d382aafbSBarry Smith 414e28ce29aSPatrick Sanan Notes: 415e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 416a990b902SBarry Smith 417d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 418d382aafbSBarry Smith 419d382aafbSBarry Smith M*/ 420d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 421d382aafbSBarry Smith 422d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 423014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 424014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 4254cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 42682f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 427d382aafbSBarry Smith 428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 431d382aafbSBarry Smith 432d382aafbSBarry Smith /*MC 43395dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 434d382aafbSBarry Smith 435eca87e8dSBarry Smith Synopsis: 436aaa7dc30SBarry Smith #include <petscsys.h> 437eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 438eca87e8dSBarry Smith 439eca87e8dSBarry Smith Not Collective 440eca87e8dSBarry Smith 441d382aafbSBarry Smith Input Parameter: 442d382aafbSBarry Smith . m - number of bytes to allocate 443d382aafbSBarry Smith 444d382aafbSBarry Smith Output Parameter: 445d382aafbSBarry Smith . result - memory allocated 446d382aafbSBarry Smith 447d382aafbSBarry Smith Level: beginner 448d382aafbSBarry Smith 44949d7da52SJed Brown Notes: 45049d7da52SJed Brown Memory is always allocated at least double aligned 451d382aafbSBarry Smith 45249d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 453d382aafbSBarry Smith 454d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 455d382aafbSBarry Smith 456d382aafbSBarry Smith Concepts: memory allocation 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 45949d7da52SJed Brown #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 460d382aafbSBarry Smith 461d382aafbSBarry Smith /*MC 4623221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 4633221ece2SMatthew G. Knepley 4643221ece2SMatthew G. Knepley Synopsis: 4653221ece2SMatthew G. Knepley #include <petscsys.h> 4663221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 4673221ece2SMatthew G. Knepley 4683221ece2SMatthew G. Knepley Not Collective 4693221ece2SMatthew G. Knepley 4703221ece2SMatthew G. Knepley Input Parameters: 4713221ece2SMatthew G. Knepley + m - number of bytes to allocate 4723221ece2SMatthew G. Knepley - result - initial memory allocated 4733221ece2SMatthew G. Knepley 4743221ece2SMatthew G. Knepley Output Parameter: 4753221ece2SMatthew G. Knepley . result - new memory allocated 4763221ece2SMatthew G. Knepley 4773221ece2SMatthew G. Knepley Level: developer 4783221ece2SMatthew G. Knepley 4793221ece2SMatthew G. Knepley Notes: 4803221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 4813221ece2SMatthew G. Knepley 4823221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 4833221ece2SMatthew G. Knepley 4843221ece2SMatthew G. Knepley Concepts: memory allocation 4853221ece2SMatthew G. Knepley 4863221ece2SMatthew G. Knepley M*/ 4873221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 4883221ece2SMatthew G. Knepley 4893221ece2SMatthew G. Knepley /*MC 490503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 491d382aafbSBarry Smith 492d382aafbSBarry Smith Synopsis: 493aaa7dc30SBarry Smith #include <petscsys.h> 494d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 495d382aafbSBarry Smith 496eca87e8dSBarry Smith Not Collective 497eca87e8dSBarry Smith 498eca87e8dSBarry Smith Input Parameters: 499eca87e8dSBarry Smith . addr - address to align (any pointer type) 500eca87e8dSBarry Smith 501d382aafbSBarry Smith Level: developer 502d382aafbSBarry Smith 503d382aafbSBarry Smith .seealso: PetscMallocAlign() 504d382aafbSBarry Smith 505d382aafbSBarry Smith Concepts: memory allocation 506d382aafbSBarry Smith M*/ 507d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 508d382aafbSBarry Smith 509d382aafbSBarry Smith /*MC 510785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 511d382aafbSBarry Smith 512eca87e8dSBarry Smith Synopsis: 513aaa7dc30SBarry Smith #include <petscsys.h> 514785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 515785e854fSJed Brown 516785e854fSJed Brown Not Collective 517785e854fSJed Brown 518785e854fSJed Brown Input Parameter: 519390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 520785e854fSJed Brown 521785e854fSJed Brown Output Parameter: 522785e854fSJed Brown . r1 - memory allocated in first chunk 523785e854fSJed Brown 524e28ce29aSPatrick Sanan Note: 525e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 526390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 527390e1bf2SBarry Smith $ PetscInt *id; 528390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 529390e1bf2SBarry Smith not 530390e1bf2SBarry Smith $ PetscInt *id; 531390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 532390e1bf2SBarry Smith 533390e1bf2SBarry Smith Does not zero the memory allocatd, used PetscCalloc1() to obtain memory that has been zeroed. 534390e1bf2SBarry Smith 535390e1bf2SBarry Smith Level: beginner 536785e854fSJed Brown 5371795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 538785e854fSJed Brown 539785e854fSJed Brown Concepts: memory allocation 540785e854fSJed Brown 541785e854fSJed Brown M*/ 5422553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 543785e854fSJed Brown 544785e854fSJed Brown /*MC 5451795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 5461795a4d1SJed Brown 5471795a4d1SJed Brown Synopsis: 548aaa7dc30SBarry Smith #include <petscsys.h> 5491795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 5501795a4d1SJed Brown 5511795a4d1SJed Brown Not Collective 5521795a4d1SJed Brown 5531795a4d1SJed Brown Input Parameter: 5541795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5551795a4d1SJed Brown 5561795a4d1SJed Brown Output Parameter: 5571795a4d1SJed Brown . r1 - memory allocated in first chunk 5581795a4d1SJed Brown 559e28ce29aSPatrick Sanan Notes: 560e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 561390e1bf2SBarry Smith 562390e1bf2SBarry Smith Level: beginner 5631795a4d1SJed Brown 5641795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 5651795a4d1SJed Brown 5661795a4d1SJed Brown Concepts: memory allocation 5671795a4d1SJed Brown 5681795a4d1SJed Brown M*/ 5692553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 5701795a4d1SJed Brown 5711795a4d1SJed Brown /*MC 572dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 573d382aafbSBarry Smith 574eca87e8dSBarry Smith Synopsis: 575aaa7dc30SBarry Smith #include <petscsys.h> 576dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 577eca87e8dSBarry Smith 578eca87e8dSBarry Smith Not Collective 579eca87e8dSBarry Smith 580d382aafbSBarry Smith Input Parameter: 581d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 582dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 583d382aafbSBarry Smith 584d382aafbSBarry Smith Output Parameter: 585d382aafbSBarry Smith + r1 - memory allocated in first chunk 586d382aafbSBarry Smith - r2 - memory allocated in second chunk 587d382aafbSBarry Smith 588d382aafbSBarry Smith Level: developer 589d382aafbSBarry Smith 5901795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 591d382aafbSBarry Smith 592d382aafbSBarry Smith Concepts: memory allocation 593d382aafbSBarry Smith 594d382aafbSBarry Smith M*/ 5952553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 596d382aafbSBarry Smith 597d382aafbSBarry Smith /*MC 5981795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 599d382aafbSBarry Smith 600eca87e8dSBarry Smith Synopsis: 601aaa7dc30SBarry Smith #include <petscsys.h> 6021795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 603eca87e8dSBarry Smith 604eca87e8dSBarry Smith Not Collective 605eca87e8dSBarry Smith 606d382aafbSBarry Smith Input Parameter: 607d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 6081795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 6091795a4d1SJed Brown 6101795a4d1SJed Brown Output Parameter: 6111795a4d1SJed Brown + r1 - memory allocated in first chunk 6121795a4d1SJed Brown - r2 - memory allocated in second chunk 6131795a4d1SJed Brown 6141795a4d1SJed Brown Level: developer 6151795a4d1SJed Brown 6161795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 6171795a4d1SJed Brown 6181795a4d1SJed Brown Concepts: memory allocation 6191795a4d1SJed Brown M*/ 6202553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 6211795a4d1SJed Brown 6221795a4d1SJed Brown /*MC 623dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 624d382aafbSBarry Smith 625d382aafbSBarry Smith Synopsis: 626aaa7dc30SBarry Smith #include <petscsys.h> 627dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 628d382aafbSBarry Smith 629d382aafbSBarry Smith Not Collective 630d382aafbSBarry Smith 631d382aafbSBarry Smith Input Parameter: 632d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 633d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 634dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 635d382aafbSBarry Smith 636d382aafbSBarry Smith Output Parameter: 637d382aafbSBarry Smith + r1 - memory allocated in first chunk 638d382aafbSBarry Smith . r2 - memory allocated in second chunk 639d382aafbSBarry Smith - r3 - memory allocated in third chunk 640d382aafbSBarry Smith 641d382aafbSBarry Smith Level: developer 642d382aafbSBarry Smith 6431795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 644d382aafbSBarry Smith 645d382aafbSBarry Smith Concepts: memory allocation 646d382aafbSBarry Smith 647d382aafbSBarry Smith M*/ 6482553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 649d382aafbSBarry Smith 650d382aafbSBarry Smith /*MC 6511795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 652d382aafbSBarry Smith 653eca87e8dSBarry Smith Synopsis: 654aaa7dc30SBarry Smith #include <petscsys.h> 6551795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 656eca87e8dSBarry Smith 657eca87e8dSBarry Smith Not Collective 658eca87e8dSBarry Smith 659d382aafbSBarry Smith Input Parameter: 660d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 661d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 6621795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 6631795a4d1SJed Brown 6641795a4d1SJed Brown Output Parameter: 6651795a4d1SJed Brown + r1 - memory allocated in first chunk 6661795a4d1SJed Brown . r2 - memory allocated in second chunk 6671795a4d1SJed Brown - r3 - memory allocated in third chunk 6681795a4d1SJed Brown 6691795a4d1SJed Brown Level: developer 6701795a4d1SJed Brown 6711795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 6721795a4d1SJed Brown 6731795a4d1SJed Brown Concepts: memory allocation 6741795a4d1SJed Brown M*/ 6752553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 6761795a4d1SJed Brown 6771795a4d1SJed Brown /*MC 678dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 679d382aafbSBarry Smith 680d382aafbSBarry Smith Synopsis: 681aaa7dc30SBarry Smith #include <petscsys.h> 682dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 683d382aafbSBarry Smith 684d382aafbSBarry Smith Not Collective 685d382aafbSBarry Smith 686d382aafbSBarry Smith Input Parameter: 687d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 688d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 689d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 690dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 691d382aafbSBarry Smith 692d382aafbSBarry Smith Output Parameter: 693d382aafbSBarry Smith + r1 - memory allocated in first chunk 694d382aafbSBarry Smith . r2 - memory allocated in second chunk 695d382aafbSBarry Smith . r3 - memory allocated in third chunk 696d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 697d382aafbSBarry Smith 698d382aafbSBarry Smith Level: developer 699d382aafbSBarry Smith 7001795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 701d382aafbSBarry Smith 702d382aafbSBarry Smith Concepts: memory allocation 703d382aafbSBarry Smith 704d382aafbSBarry Smith M*/ 7052553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 706d382aafbSBarry Smith 707d382aafbSBarry Smith /*MC 7081795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 709d382aafbSBarry Smith 710eca87e8dSBarry Smith Synopsis: 711aaa7dc30SBarry Smith #include <petscsys.h> 7121795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 713eca87e8dSBarry Smith 714eca87e8dSBarry Smith Not Collective 715eca87e8dSBarry Smith 716e28ce29aSPatrick Sanan Input Parameters: 717d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 718d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 719d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 7201795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 7211795a4d1SJed Brown 722e28ce29aSPatrick Sanan Output Parameters: 7231795a4d1SJed Brown + r1 - memory allocated in first chunk 7241795a4d1SJed Brown . r2 - memory allocated in second chunk 7251795a4d1SJed Brown . r3 - memory allocated in third chunk 7261795a4d1SJed Brown - r4 - memory allocated in fourth chunk 7271795a4d1SJed Brown 7281795a4d1SJed Brown Level: developer 7291795a4d1SJed Brown 7301795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 7311795a4d1SJed Brown 7321795a4d1SJed Brown Concepts: memory allocation 7331795a4d1SJed Brown 7341795a4d1SJed Brown M*/ 7352553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 7361795a4d1SJed Brown 7371795a4d1SJed Brown /*MC 738dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 739d382aafbSBarry Smith 740d382aafbSBarry Smith Synopsis: 741aaa7dc30SBarry Smith #include <petscsys.h> 742dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 743d382aafbSBarry Smith 744d382aafbSBarry Smith Not Collective 745d382aafbSBarry Smith 746e28ce29aSPatrick Sanan Input Parameters: 747d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 748d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 749d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 750d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 751dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 752d382aafbSBarry Smith 753e28ce29aSPatrick Sanan Output Parameters: 754d382aafbSBarry Smith + r1 - memory allocated in first chunk 755d382aafbSBarry Smith . r2 - memory allocated in second chunk 756d382aafbSBarry Smith . r3 - memory allocated in third chunk 757d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 758d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 759d382aafbSBarry Smith 760d382aafbSBarry Smith Level: developer 761d382aafbSBarry Smith 7621795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 763d382aafbSBarry Smith 764d382aafbSBarry Smith Concepts: memory allocation 765d382aafbSBarry Smith 766d382aafbSBarry Smith M*/ 7672553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 768d382aafbSBarry Smith 769d382aafbSBarry Smith /*MC 7701795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 771d382aafbSBarry Smith 772eca87e8dSBarry Smith Synopsis: 773aaa7dc30SBarry Smith #include <petscsys.h> 7741795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 775eca87e8dSBarry Smith 776eca87e8dSBarry Smith Not Collective 777eca87e8dSBarry Smith 778e28ce29aSPatrick Sanan Input Parameters: 779d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 780d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 781d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 782d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7831795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7841795a4d1SJed Brown 785e28ce29aSPatrick Sanan Output Parameters: 7861795a4d1SJed Brown + r1 - memory allocated in first chunk 7871795a4d1SJed Brown . r2 - memory allocated in second chunk 7881795a4d1SJed Brown . r3 - memory allocated in third chunk 7891795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7901795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7911795a4d1SJed Brown 7921795a4d1SJed Brown Level: developer 7931795a4d1SJed Brown 7941795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 7951795a4d1SJed Brown 7961795a4d1SJed Brown Concepts: memory allocation 7971795a4d1SJed Brown 7981795a4d1SJed Brown M*/ 7992553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 800d382aafbSBarry Smith 801d382aafbSBarry Smith /*MC 802dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 803d382aafbSBarry Smith 804d382aafbSBarry Smith Synopsis: 805aaa7dc30SBarry Smith #include <petscsys.h> 806dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 807d382aafbSBarry Smith 808d382aafbSBarry Smith Not Collective 809d382aafbSBarry Smith 810e28ce29aSPatrick Sanan Input Parameters: 811d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 812d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 813d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 814d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 815d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 816dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 817d382aafbSBarry Smith 818e28ce29aSPatrick Sanan Output Parameteasr: 819d382aafbSBarry Smith + r1 - memory allocated in first chunk 820d382aafbSBarry Smith . r2 - memory allocated in second chunk 821d382aafbSBarry Smith . r3 - memory allocated in third chunk 822d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 823d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 824d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 825d382aafbSBarry Smith 826d382aafbSBarry Smith Level: developer 827d382aafbSBarry Smith 8281795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 829d382aafbSBarry Smith 830d382aafbSBarry Smith Concepts: memory allocation 831d382aafbSBarry Smith 832d382aafbSBarry Smith M*/ 8332553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 834d382aafbSBarry Smith 835d382aafbSBarry Smith /*MC 8361795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 837d382aafbSBarry Smith 838eca87e8dSBarry Smith Synopsis: 839aaa7dc30SBarry Smith #include <petscsys.h> 8401795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 841eca87e8dSBarry Smith 842eca87e8dSBarry Smith Not Collective 843eca87e8dSBarry Smith 844e28ce29aSPatrick Sanan Input Parameters: 845d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 846d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 847d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 848d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 849d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 8501795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 8511795a4d1SJed Brown 852e28ce29aSPatrick Sanan Output Parameters: 8531795a4d1SJed Brown + r1 - memory allocated in first chunk 8541795a4d1SJed Brown . r2 - memory allocated in second chunk 8551795a4d1SJed Brown . r3 - memory allocated in third chunk 8561795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8571795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8581795a4d1SJed Brown - r6 - memory allocated in sixth chunk 8591795a4d1SJed Brown 8601795a4d1SJed Brown Level: developer 8611795a4d1SJed Brown 8621795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 8631795a4d1SJed Brown 8641795a4d1SJed Brown Concepts: memory allocation 8651795a4d1SJed Brown M*/ 8662553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 8671795a4d1SJed Brown 8681795a4d1SJed Brown /*MC 869dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 870d382aafbSBarry Smith 871d382aafbSBarry Smith Synopsis: 872aaa7dc30SBarry Smith #include <petscsys.h> 873dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 874d382aafbSBarry Smith 875d382aafbSBarry Smith Not Collective 876d382aafbSBarry Smith 877e28ce29aSPatrick Sanan Input Parameters: 878d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 879d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 880d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 881d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 882d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 883d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 884dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 885d382aafbSBarry Smith 886e28ce29aSPatrick Sanan Output Parameters: 887d382aafbSBarry Smith + r1 - memory allocated in first chunk 888d382aafbSBarry Smith . r2 - memory allocated in second chunk 889d382aafbSBarry Smith . r3 - memory allocated in third chunk 890d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 891d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 892d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 893eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 894d382aafbSBarry Smith 895d382aafbSBarry Smith Level: developer 896d382aafbSBarry Smith 8971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 898d382aafbSBarry Smith 899d382aafbSBarry Smith Concepts: memory allocation 900d382aafbSBarry Smith 901d382aafbSBarry Smith M*/ 9022553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 903d382aafbSBarry Smith 904d382aafbSBarry Smith /*MC 9051795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 9061795a4d1SJed Brown 9071795a4d1SJed Brown Synopsis: 908aaa7dc30SBarry Smith #include <petscsys.h> 9091795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 9101795a4d1SJed Brown 9111795a4d1SJed Brown Not Collective 9121795a4d1SJed Brown 913e28ce29aSPatrick Sanan Input Parameters: 9141795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 9151795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 9161795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 9171795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 9181795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 9191795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 9201795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 9211795a4d1SJed Brown 922e28ce29aSPatrick Sanan Output Parameters: 9231795a4d1SJed Brown + r1 - memory allocated in first chunk 9241795a4d1SJed Brown . r2 - memory allocated in second chunk 9251795a4d1SJed Brown . r3 - memory allocated in third chunk 9261795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9271795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9281795a4d1SJed Brown . r6 - memory allocated in sixth chunk 9291795a4d1SJed Brown - r7 - memory allocated in seventh chunk 9301795a4d1SJed Brown 9311795a4d1SJed Brown Level: developer 9321795a4d1SJed Brown 9331795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 9341795a4d1SJed Brown 9351795a4d1SJed Brown Concepts: memory allocation 9361795a4d1SJed Brown M*/ 9372553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 9381795a4d1SJed Brown 9391795a4d1SJed Brown /*MC 940503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 941d382aafbSBarry Smith 942eca87e8dSBarry Smith Synopsis: 943aaa7dc30SBarry Smith #include <petscsys.h> 944b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 945eca87e8dSBarry Smith 946eca87e8dSBarry Smith Not Collective 947eca87e8dSBarry Smith 948d382aafbSBarry Smith Output Parameter: 949b00a9115SJed Brown . result - memory allocated, sized to match pointer type 950d382aafbSBarry Smith 951d382aafbSBarry Smith Level: beginner 952d382aafbSBarry Smith 953390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 954d382aafbSBarry Smith 955d382aafbSBarry Smith Concepts: memory allocation 956d382aafbSBarry Smith 957d382aafbSBarry Smith M*/ 958b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 959ad0619ddSBarry Smith 960ad0619ddSBarry Smith /*MC 961b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 962ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 963ad0619ddSBarry Smith 964ad0619ddSBarry Smith Synopsis: 965aaa7dc30SBarry Smith #include <petscsys.h> 966b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 967ad0619ddSBarry Smith 968ad0619ddSBarry Smith Not Collective 969ad0619ddSBarry Smith 970ad0619ddSBarry Smith Input Parameter: 971b00a9115SJed Brown . obj - object memory is logged to 972ad0619ddSBarry Smith 973ad0619ddSBarry Smith Output Parameter: 974b00a9115SJed Brown . result - memory allocated, sized to match pointer type 975ad0619ddSBarry Smith 976ad0619ddSBarry Smith Level: developer 977ad0619ddSBarry Smith 978390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 979ad0619ddSBarry Smith 980ad0619ddSBarry Smith Concepts: memory allocation 981ad0619ddSBarry Smith 982ad0619ddSBarry Smith M*/ 983d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 984d382aafbSBarry Smith 985d382aafbSBarry Smith /*MC 986d382aafbSBarry Smith PetscFree - Frees memory 987d382aafbSBarry Smith 988eca87e8dSBarry Smith Synopsis: 989aaa7dc30SBarry Smith #include <petscsys.h> 990eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 991eca87e8dSBarry Smith 992eca87e8dSBarry Smith Not Collective 993eca87e8dSBarry Smith 994d382aafbSBarry Smith Input Parameter: 995390e1bf2SBarry Smith . memory - memory to free (the pointer is ALWAYS set to NULL upon sucess) 996d382aafbSBarry Smith 997d382aafbSBarry Smith Level: beginner 998d382aafbSBarry Smith 99949d7da52SJed Brown Notes: 1000390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1001390e1bf2SBarry Smith 100249d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1003d382aafbSBarry Smith 1004390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1005d382aafbSBarry Smith 1006d382aafbSBarry Smith Concepts: memory allocation 1007d382aafbSBarry Smith 1008d382aafbSBarry Smith M*/ 100949d7da52SJed Brown #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0)) 1010d382aafbSBarry Smith 1011d382aafbSBarry Smith /*MC 1012d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1013d382aafbSBarry Smith 1014eca87e8dSBarry Smith Synopsis: 1015aaa7dc30SBarry Smith #include <petscsys.h> 1016eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1017eca87e8dSBarry Smith 1018eca87e8dSBarry Smith Not Collective 1019eca87e8dSBarry Smith 1020e28ce29aSPatrick Sanan Input Parameters: 1021d382aafbSBarry Smith + memory1 - memory to free 1022d382aafbSBarry Smith - memory2 - 2nd memory to free 1023d382aafbSBarry Smith 1024d382aafbSBarry Smith Level: developer 1025d382aafbSBarry Smith 102695452b02SPatrick Sanan Notes: 102795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1028d382aafbSBarry Smith 1029d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1030d382aafbSBarry Smith 1031d382aafbSBarry Smith Concepts: memory allocation 1032d382aafbSBarry Smith 1033d382aafbSBarry Smith M*/ 1034ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1035d382aafbSBarry Smith 1036d382aafbSBarry Smith /*MC 1037d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1038d382aafbSBarry Smith 1039eca87e8dSBarry Smith Synopsis: 1040aaa7dc30SBarry Smith #include <petscsys.h> 1041eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1042eca87e8dSBarry Smith 1043eca87e8dSBarry Smith Not Collective 1044eca87e8dSBarry Smith 1045e28ce29aSPatrick Sanan Input Parameters: 1046d382aafbSBarry Smith + memory1 - memory to free 1047d382aafbSBarry Smith . memory2 - 2nd memory to free 1048d382aafbSBarry Smith - memory3 - 3rd memory to free 1049d382aafbSBarry Smith 1050d382aafbSBarry Smith Level: developer 1051d382aafbSBarry Smith 105295452b02SPatrick Sanan Notes: 105395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1054d382aafbSBarry Smith 1055d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1056d382aafbSBarry Smith 1057d382aafbSBarry Smith Concepts: memory allocation 1058d382aafbSBarry Smith 1059d382aafbSBarry Smith M*/ 1060ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1061d382aafbSBarry Smith 1062d382aafbSBarry Smith /*MC 1063d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1064d382aafbSBarry Smith 1065eca87e8dSBarry Smith Synopsis: 1066aaa7dc30SBarry Smith #include <petscsys.h> 1067eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1068eca87e8dSBarry Smith 1069eca87e8dSBarry Smith Not Collective 1070eca87e8dSBarry Smith 1071e28ce29aSPatrick Sanan Input Parameters: 1072d382aafbSBarry Smith + m1 - memory to free 1073d382aafbSBarry Smith . m2 - 2nd memory to free 1074d382aafbSBarry Smith . m3 - 3rd memory to free 1075d382aafbSBarry Smith - m4 - 4th memory to free 1076d382aafbSBarry Smith 1077d382aafbSBarry Smith Level: developer 1078d382aafbSBarry Smith 107995452b02SPatrick Sanan Notes: 108095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1081d382aafbSBarry Smith 1082d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1083d382aafbSBarry Smith 1084d382aafbSBarry Smith Concepts: memory allocation 1085d382aafbSBarry Smith 1086d382aafbSBarry Smith M*/ 1087ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1088d382aafbSBarry Smith 1089d382aafbSBarry Smith /*MC 1090d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1091d382aafbSBarry Smith 1092eca87e8dSBarry Smith Synopsis: 1093aaa7dc30SBarry Smith #include <petscsys.h> 1094eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1095eca87e8dSBarry Smith 1096eca87e8dSBarry Smith Not Collective 1097eca87e8dSBarry Smith 1098e28ce29aSPatrick Sanan Input Parameters: 1099d382aafbSBarry Smith + m1 - memory to free 1100d382aafbSBarry Smith . m2 - 2nd memory to free 1101d382aafbSBarry Smith . m3 - 3rd memory to free 1102d382aafbSBarry Smith . m4 - 4th memory to free 1103d382aafbSBarry Smith - m5 - 5th memory to free 1104d382aafbSBarry Smith 1105d382aafbSBarry Smith Level: developer 1106d382aafbSBarry Smith 110795452b02SPatrick Sanan Notes: 110895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1109d382aafbSBarry Smith 1110d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1111d382aafbSBarry Smith 1112d382aafbSBarry Smith Concepts: memory allocation 1113d382aafbSBarry Smith 1114d382aafbSBarry Smith M*/ 1115ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1116d382aafbSBarry Smith 1117d382aafbSBarry Smith /*MC 1118d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1119d382aafbSBarry Smith 1120eca87e8dSBarry Smith Synopsis: 1121aaa7dc30SBarry Smith #include <petscsys.h> 1122eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1123eca87e8dSBarry Smith 1124eca87e8dSBarry Smith Not Collective 1125eca87e8dSBarry Smith 1126e28ce29aSPatrick Sanan Input Parameters: 1127d382aafbSBarry Smith + m1 - memory to free 1128d382aafbSBarry Smith . m2 - 2nd memory to free 1129d382aafbSBarry Smith . m3 - 3rd memory to free 1130d382aafbSBarry Smith . m4 - 4th memory to free 1131d382aafbSBarry Smith . m5 - 5th memory to free 1132d382aafbSBarry Smith - m6 - 6th memory to free 1133d382aafbSBarry Smith 1134d382aafbSBarry Smith 1135d382aafbSBarry Smith Level: developer 1136d382aafbSBarry Smith 113795452b02SPatrick Sanan Notes: 113895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1139d382aafbSBarry Smith 1140d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1141d382aafbSBarry Smith 1142d382aafbSBarry Smith Concepts: memory allocation 1143d382aafbSBarry Smith 1144d382aafbSBarry Smith M*/ 1145ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1146d382aafbSBarry Smith 1147d382aafbSBarry Smith /*MC 1148d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1149d382aafbSBarry Smith 1150eca87e8dSBarry Smith Synopsis: 1151aaa7dc30SBarry Smith #include <petscsys.h> 1152eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1153eca87e8dSBarry Smith 1154eca87e8dSBarry Smith Not Collective 1155eca87e8dSBarry Smith 1156e28ce29aSPatrick Sanan Input Parameters: 1157d382aafbSBarry Smith + m1 - memory to free 1158d382aafbSBarry Smith . m2 - 2nd memory to free 1159d382aafbSBarry Smith . m3 - 3rd memory to free 1160d382aafbSBarry Smith . m4 - 4th memory to free 1161d382aafbSBarry Smith . m5 - 5th memory to free 1162d382aafbSBarry Smith . m6 - 6th memory to free 1163d382aafbSBarry Smith - m7 - 7th memory to free 1164d382aafbSBarry Smith 1165d382aafbSBarry Smith 1166d382aafbSBarry Smith Level: developer 1167d382aafbSBarry Smith 116895452b02SPatrick Sanan Notes: 116995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1170d382aafbSBarry Smith 1171d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1172d382aafbSBarry Smith PetscMalloc7() 1173d382aafbSBarry Smith 1174d382aafbSBarry Smith Concepts: memory allocation 1175d382aafbSBarry Smith 1176d382aafbSBarry Smith M*/ 1177ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1178d382aafbSBarry Smith 1179ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1180ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1181efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**); 1182efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 11833221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1184ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 1185efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[])); 1186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1187d382aafbSBarry Smith 1188d382aafbSBarry Smith /* 1189c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1190c1706be6SHong Zhang */ 1191c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1192c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 1193c1706be6SHong Zhang 1194a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 119536763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1196a5057860SBarry Smith 1197a5057860SBarry Smith /* 119866d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1199d382aafbSBarry Smith */ 1200014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1201014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1202014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1203014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1204e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1205e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 1206014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 12070acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*); 1208efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 1209014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1210574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble); 1211014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1212d382aafbSBarry Smith 12136a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1214014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1215014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1216014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 12178e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1218d382aafbSBarry Smith 1219d382aafbSBarry Smith /* 1220d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1221d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1222d382aafbSBarry Smith functionality and/or error checking. 1223d382aafbSBarry Smith */ 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1226014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1228d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1230014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1231014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1232014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1234014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1236a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 12402f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 12452c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 124847340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 12496fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 12506991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 12516991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1253d382aafbSBarry Smith 1254573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1255573b0fb4SBarry Smith 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 12598e81d068SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1260d382aafbSBarry Smith 1261a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1262a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1263a53986e1SJed Brown 1264d382aafbSBarry Smith /* 1265d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1266d382aafbSBarry Smith */ 1267367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1268570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1269014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 12702414b3c7SJed Brown #else 12712414b3c7SJed Brown #define MPIU_SUM MPI_SUM 12722414b3c7SJed Brown #endif 1273570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1274014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1275014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1276d9822059SBarry Smith #else 1277d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1278d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1279d9822059SBarry Smith #endif 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1281d382aafbSBarry Smith 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1284eb3f98d2SBarry Smith 128595c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1286d6a4318aSJed Brown 1287639ff905SBarry Smith /* 1288639ff905SBarry Smith Defines PETSc error handling. 1289639ff905SBarry Smith */ 1290639ff905SBarry Smith #include <petscerror.h> 1291d382aafbSBarry Smith 12920700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1293014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1294014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1296d382aafbSBarry Smith 1297d382aafbSBarry Smith /* 1298d382aafbSBarry Smith Routines that get memory usage information from the OS 1299d382aafbSBarry Smith */ 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1303b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1304d382aafbSBarry Smith 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1307d382aafbSBarry Smith 1308d382aafbSBarry Smith /* 1309d382aafbSBarry Smith Initialization of PETSc 1310d382aafbSBarry Smith */ 1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1321d382aafbSBarry Smith 1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1323607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1324d382aafbSBarry Smith 1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1329d382aafbSBarry Smith 1330d382aafbSBarry Smith /* 1331d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 13322981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1333d382aafbSBarry Smith */ 1334638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1335638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1336638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1337d382aafbSBarry Smith 1338d382aafbSBarry Smith /* 1339d382aafbSBarry Smith Functions that can act on any PETSc object. 1340d382aafbSBarry Smith */ 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1359bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1360bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 13630eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 13640eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1366d382aafbSBarry Smith 1367665c2dedSJed Brown #include <petscviewertypes.h> 1368639ff905SBarry Smith #include <petscoptions.h> 1369639ff905SBarry Smith 13700633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 13710633abcbSJed Brown 1372639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1373c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1374dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1375639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 13760005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 13770005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1385685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 13884099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1392d382aafbSBarry Smith 1393e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13947aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1395e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1396e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1397e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1398e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1399e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1400e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1401e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1402e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1403e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 140415681b3cSBarry Smith 1405ec7429eaSBarry Smith #else 14067aab2a10SBarry Smith #define PetscSAWsBlock() 0 1407e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1408e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1409e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1410e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1411e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1412e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1413e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1414e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1415e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 141615681b3cSBarry Smith 1417ec7429eaSBarry Smith #endif 1418b90c6cbeSBarry Smith 141982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 142082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 142182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 14227d5d4d99SBarry Smith 14235fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1424a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 14255fe58b6fSBarry Smith #endif 14267eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1427a64a8e02SBarry Smith 1428140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1429140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1430140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1431140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1432140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1433140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1434d382aafbSBarry Smith 1435d382aafbSBarry Smith /* 1436503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1437d382aafbSBarry Smith link libraries that will be loaded as needed. 1438d382aafbSBarry Smith */ 1439a240a19fSJed Brown 1440a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1441a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1442140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 14431c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 14441c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 1445140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]); 1446140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1447140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1448140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1449d382aafbSBarry Smith 1450014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1458d382aafbSBarry Smith 1459d382aafbSBarry Smith /* 1460d382aafbSBarry Smith Useful utility routines 1461d382aafbSBarry Smith */ 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 14686ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 14696ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1470d382aafbSBarry Smith 147164ac3b0dSPatrick Sanan /*MC 1472ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1473503cfb0cSBarry Smith 1474e28ce29aSPatrick Sanan Notes: 1475e28ce29aSPatrick Sanan This is useful in cases like 1476503cfb0cSBarry Smith $ int *a; 1477ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 14781cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 147964ac3b0dSPatrick Sanan 148064ac3b0dSPatrick Sanan Level: beginner 148164ac3b0dSPatrick Sanan 148264ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 148364ac3b0dSPatrick Sanan M*/ 1484d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1485503cfb0cSBarry Smith 1486d382aafbSBarry Smith /*MC 1487d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1488d382aafbSBarry Smith 1489d382aafbSBarry Smith Synopsis: 1490aaa7dc30SBarry Smith #include <petscsys.h> 1491d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1492d382aafbSBarry Smith 1493eca87e8dSBarry Smith Not Collective 1494eca87e8dSBarry Smith 1495d382aafbSBarry Smith Input Parameters: 1496d382aafbSBarry Smith . format - the usual printf() format string 1497d382aafbSBarry Smith 1498d382aafbSBarry Smith Level: developer 1499d382aafbSBarry Smith 1500d382aafbSBarry Smith Fortran Note: 1501d382aafbSBarry Smith This routine is not supported in Fortran. 1502d382aafbSBarry Smith 1503d382aafbSBarry Smith Concepts: help messages^printing 1504d382aafbSBarry Smith Concepts: printing^help messages 1505d382aafbSBarry Smith 1506d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1507d382aafbSBarry Smith M*/ 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1509d382aafbSBarry Smith 1510fcfd50ebSBarry Smith /* 1511fcfd50ebSBarry Smith Defines PETSc profiling. 1512fcfd50ebSBarry Smith */ 15132c8e378dSBarry Smith #include <petsclog.h> 1514fcfd50ebSBarry Smith 1515fcfd50ebSBarry Smith /* 1516fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1517fcfd50ebSBarry Smith */ 1518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 15251b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1526fcfd50ebSBarry Smith 1527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1530d382aafbSBarry Smith 1531d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1532d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1533d781fa04SBarry Smith 1534d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1536016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 153774ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1538d382aafbSBarry Smith #endif 1539d382aafbSBarry Smith 1540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 15420ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1546014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1547d382aafbSBarry Smith 1548014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1554b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1555d382aafbSBarry Smith 1556d382aafbSBarry Smith /* 1557d382aafbSBarry Smith For use in debuggers 1558d382aafbSBarry Smith */ 1559014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1560014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1561014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1562014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1563014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1564d382aafbSBarry Smith 1565a663daf8SBarry Smith #include <stddef.h> 1566a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1567d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1568d382aafbSBarry Smith #include <stdlib.h> 1569d382aafbSBarry Smith #endif 15706c7e564aSBarry Smith 15714a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1572d382aafbSBarry Smith #include <xmmintrin.h> 1573d382aafbSBarry Smith #endif 1574d382aafbSBarry Smith 1575d382aafbSBarry Smith /*@C 1576d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1577d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1578d382aafbSBarry Smith PetscMemmove() in that case. 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith Not Collective 1581d382aafbSBarry Smith 1582d382aafbSBarry Smith Input Parameters: 1583d382aafbSBarry Smith + b - pointer to initial memory space 1584d382aafbSBarry Smith - n - length (in bytes) of space to copy 1585d382aafbSBarry Smith 1586d382aafbSBarry Smith Output Parameter: 1587d382aafbSBarry Smith . a - pointer to copy space 1588d382aafbSBarry Smith 1589d382aafbSBarry Smith Level: intermediate 1590d382aafbSBarry Smith 1591d382aafbSBarry Smith Compile Option: 1592d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1593d382aafbSBarry Smith for memory copies on double precision values. 1594d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1595d382aafbSBarry Smith for memory copies on double precision values. 1596d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1597d382aafbSBarry Smith for memory copies on double precision values. 1598d382aafbSBarry Smith 1599d382aafbSBarry Smith Note: 1600d382aafbSBarry Smith This routine is analogous to memcpy(). 1601d382aafbSBarry Smith 16021fd49c25SBarry Smith Not available from Fortran 16031fd49c25SBarry Smith 1604f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1605f5f57ec0SBarry Smith 1606d382aafbSBarry Smith Concepts: memory^copying 1607d382aafbSBarry Smith Concepts: copying^memory 1608d382aafbSBarry Smith 16091fd49c25SBarry Smith .seealso: PetscMemmove(), PetscStrallocpy() 1610d382aafbSBarry Smith 1611d382aafbSBarry Smith @*/ 16127087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1613d382aafbSBarry Smith { 1614d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1615c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1616c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1617a7e36092SMatthew G Knepley PetscFunctionBegin; 1618e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1619e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1620a7e36092SMatthew G Knepley #else 1621d382aafbSBarry Smith PetscFunctionBegin; 1622a7e36092SMatthew G Knepley #endif 1623a47a537aSLisandro Dalcin if (a != b && n > 0) { 1624d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1625e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1626d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1627d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1628d382aafbSBarry Smith #endif 1629d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1630c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1631d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1632d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1633c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1634c5df96a5SBarry Smith PetscErrorCode ierr; 1635c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 16368b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1637d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1638d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1639d382aafbSBarry Smith #else 1640d382aafbSBarry Smith size_t i; 1641d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1642d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1643d382aafbSBarry Smith #endif 1644d382aafbSBarry Smith } else { 1645d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1646d382aafbSBarry Smith } 1647d382aafbSBarry Smith #else 1648d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1649d382aafbSBarry Smith #endif 1650d382aafbSBarry Smith } 1651d382aafbSBarry Smith PetscFunctionReturn(0); 1652d382aafbSBarry Smith } 1653d382aafbSBarry Smith 1654d382aafbSBarry Smith /*@C 1655d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1656d382aafbSBarry Smith 1657d382aafbSBarry Smith Not Collective 1658d382aafbSBarry Smith 1659d382aafbSBarry Smith Input Parameters: 1660d382aafbSBarry Smith + a - pointer to beginning memory location 1661d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1662d382aafbSBarry Smith 1663d382aafbSBarry Smith Level: intermediate 1664d382aafbSBarry Smith 1665d382aafbSBarry Smith Compile Option: 1666d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1667d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1668d382aafbSBarry Smith 16691fd49c25SBarry Smith Not available from Fortran 16701fd49c25SBarry Smith 1671503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1672503cfb0cSBarry Smith 1673d382aafbSBarry Smith Concepts: memory^zeroing 1674d382aafbSBarry Smith Concepts: zeroing^memory 1675d382aafbSBarry Smith 1676d382aafbSBarry Smith .seealso: PetscMemcpy() 1677d382aafbSBarry Smith @*/ 16787087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1679d382aafbSBarry Smith { 1680d382aafbSBarry Smith if (n > 0) { 1681d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1682e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1683d382aafbSBarry Smith #endif 1684d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1685d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1686d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1687d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1688d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1689d382aafbSBarry Smith } else { 1690d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1691d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1692d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1693d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1694d382aafbSBarry Smith } else { 1695d382aafbSBarry Smith #endif 1696d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1697d382aafbSBarry Smith bzero((char *)a,n); 1698d382aafbSBarry Smith #else 1699d382aafbSBarry Smith memset((char*)a,0,n); 1700d382aafbSBarry Smith #endif 1701d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1702d382aafbSBarry Smith } 1703d382aafbSBarry Smith #endif 1704d382aafbSBarry Smith } 1705d382aafbSBarry Smith return 0; 1706d382aafbSBarry Smith } 1707d382aafbSBarry Smith 1708d382aafbSBarry Smith /*MC 1709d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1710d382aafbSBarry Smith 1711eca87e8dSBarry Smith Synopsis: 1712aaa7dc30SBarry Smith #include <petscsys.h> 1713eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1714eca87e8dSBarry Smith 1715d382aafbSBarry Smith Not Collective 1716d382aafbSBarry Smith 1717d382aafbSBarry Smith Input Parameters: 1718d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1719d382aafbSBarry Smith . n - number of elements to fetch 1720d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 172150d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1722d382aafbSBarry Smith 1723d382aafbSBarry Smith Level: developer 1724d382aafbSBarry Smith 1725d382aafbSBarry Smith Notes: 1726d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1727d382aafbSBarry Smith 172850d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 172950d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 173050d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 173163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 173263cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 173363cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1734d382aafbSBarry Smith 1735d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1736d382aafbSBarry Smith address). 1737d382aafbSBarry Smith 1738d382aafbSBarry Smith Concepts: memory 1739d382aafbSBarry Smith M*/ 1740d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1741d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1742d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1743d382aafbSBarry Smith } while (0) 1744d382aafbSBarry Smith 1745d382aafbSBarry Smith /* 1746d382aafbSBarry Smith Determine if some of the kernel computation routines use 1747d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1748d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1749d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1750e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1751d382aafbSBarry Smith */ 1752d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1753d382aafbSBarry Smith 1754d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1755d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1756d382aafbSBarry Smith #endif 1757d382aafbSBarry Smith 17585a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 17595a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1760d382aafbSBarry Smith #endif 1761d382aafbSBarry Smith 1762d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1763d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1764d382aafbSBarry Smith #endif 1765d382aafbSBarry Smith 1766d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1767d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1768d382aafbSBarry Smith #endif 1769d382aafbSBarry Smith 1770d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1771d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1772d382aafbSBarry Smith #endif 1773d382aafbSBarry Smith 1774d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1775d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1776d382aafbSBarry Smith #endif 1777d382aafbSBarry Smith 1778d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1779d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1780d382aafbSBarry Smith #endif 1781d382aafbSBarry Smith 1782d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1783d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1784d382aafbSBarry Smith #endif 1785d382aafbSBarry Smith 1786d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1787d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1788d382aafbSBarry Smith #endif 1789d382aafbSBarry Smith 1790d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1791d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1792d382aafbSBarry Smith #endif 1793d382aafbSBarry Smith 1794d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1795d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1796d382aafbSBarry Smith #endif 1797d382aafbSBarry Smith 1798d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1799d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1800d382aafbSBarry Smith #endif 1801d382aafbSBarry Smith 1802d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1803d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1804d382aafbSBarry Smith #endif 1805d382aafbSBarry Smith 1806d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1807d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1808d382aafbSBarry Smith #endif 1809d382aafbSBarry Smith 1810d382aafbSBarry Smith #endif 1811d382aafbSBarry Smith 1812d382aafbSBarry Smith /* 1813d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1814d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1815d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1816d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1817d382aafbSBarry Smith ugly extern "C" {} wrappers. 1818d382aafbSBarry Smith */ 1819d382aafbSBarry Smith #if defined(__cplusplus) 1820d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 1821d382aafbSBarry Smith # define EXTERN_C_END } 1822d382aafbSBarry Smith #else 1823d382aafbSBarry Smith # define EXTERN_C_BEGIN 1824d382aafbSBarry Smith # define EXTERN_C_END 1825d382aafbSBarry Smith #endif 1826d382aafbSBarry Smith 1827d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1828d382aafbSBarry Smith 1829d382aafbSBarry Smith /*MC 1830d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1831d382aafbSBarry Smith communication 1832d382aafbSBarry Smith 1833d382aafbSBarry Smith Level: beginner 1834d382aafbSBarry Smith 1835d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1836d382aafbSBarry Smith 1837d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1838d382aafbSBarry Smith M*/ 1839d382aafbSBarry Smith 1840d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1841014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1842014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1843d382aafbSBarry Smith #endif 1844d382aafbSBarry Smith 1845d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1846d382aafbSBarry Smith 1847d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1848d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1849d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1850d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1851d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1852d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1853d382aafbSBarry Smith 185461b0d812SBarry Smith /*@C 185561b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 185661b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 185761b0d812SBarry Smith 185861b0d812SBarry Smith Not Collective 185961b0d812SBarry Smith 186061b0d812SBarry Smith Input Parameter: 186161b0d812SBarry Smith . a - the PetscInt value 186261b0d812SBarry Smith 186361b0d812SBarry Smith Output Parameter: 186461b0d812SBarry Smith . b - the resulting PetscBLASInt value 186561b0d812SBarry Smith 186661b0d812SBarry Smith Level: advanced 186761b0d812SBarry Smith 18681fd49c25SBarry Smith Not available from Fortran 18691fd49c25SBarry Smith 187061b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast() 187161b0d812SBarry Smith @*/ 1872c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 1873c5df96a5SBarry Smith { 1874c5df96a5SBarry Smith PetscFunctionBegin; 1875ab7117d1SBarry Smith *b = (PetscBLASInt)(a); 1876c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 1877c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 1878c5df96a5SBarry Smith #endif 1879c5df96a5SBarry Smith PetscFunctionReturn(0); 1880c5df96a5SBarry Smith } 1881c5df96a5SBarry Smith 188261b0d812SBarry Smith /*@C 188361b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 188461b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 188561b0d812SBarry Smith 188661b0d812SBarry Smith Not Collective 188761b0d812SBarry Smith 188861b0d812SBarry Smith Input Parameter: 188961b0d812SBarry Smith . a - the PetscInt value 189061b0d812SBarry Smith 189161b0d812SBarry Smith Output Parameter: 189261b0d812SBarry Smith . b - the resulting PetscMPIInt value 189361b0d812SBarry Smith 189461b0d812SBarry Smith Level: advanced 189561b0d812SBarry Smith 18961fd49c25SBarry Smith Not available from Fortran 18971fd49c25SBarry Smith 189861b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast() 189961b0d812SBarry Smith @*/ 19004dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 19014dc2109aSBarry Smith { 19024dc2109aSBarry Smith PetscFunctionBegin; 1903ab7117d1SBarry Smith *b = (PetscMPIInt)(a); 19044dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 19054dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 19064dc2109aSBarry Smith #endif 19074dc2109aSBarry Smith PetscFunctionReturn(0); 19084dc2109aSBarry Smith } 19094dc2109aSBarry Smith 1910bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 19112f18eb33SBarry Smith 19122f18eb33SBarry Smith /*@C 19132f18eb33SBarry Smith 19142f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 19152f18eb33SBarry Smith 19162f18eb33SBarry Smith Not Collective 19172f18eb33SBarry Smith 19182f18eb33SBarry Smith Input Parameter: 19192f18eb33SBarry Smith + a - the PetscReal value 19202f18eb33SBarry Smith - b - the second value 19212f18eb33SBarry Smith 1922390e1bf2SBarry Smith Returns: 1923390e1bf2SBarry Smith the result as a PetscInt value 19242f18eb33SBarry Smith 1925bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 19262f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 19272f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 19282f18eb33SBarry Smith 1929e28ce29aSPatrick Sanan Developers Note: 1930e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 19312f18eb33SBarry Smith 19322f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 19332f18eb33SBarry Smith 19341fd49c25SBarry Smith Not available from Fortran 19351fd49c25SBarry Smith 19362f18eb33SBarry Smith Level: advanced 19372f18eb33SBarry Smith 1938390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 19392f18eb33SBarry Smith @*/ 19402f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 19412f18eb33SBarry Smith { 1942bafee8b4SSatish Balay PetscInt64 r; 19432f18eb33SBarry Smith 1944bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 19452f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 19462f18eb33SBarry Smith return (PetscInt) r; 19472f18eb33SBarry Smith } 19482f18eb33SBarry Smith 19492f18eb33SBarry Smith /*@C 19502f18eb33SBarry Smith 19512f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 19522f18eb33SBarry Smith 19532f18eb33SBarry Smith Not Collective 19542f18eb33SBarry Smith 19552f18eb33SBarry Smith Input Parameter: 19562f18eb33SBarry Smith + a - the PetscInt value 19572f18eb33SBarry Smith - b - the second value 19582f18eb33SBarry Smith 1959390e1bf2SBarry Smith Returns: 1960390e1bf2SBarry Smith the result as a PetscInt value 19612f18eb33SBarry Smith 1962bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 19632f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 19642f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 19652f18eb33SBarry Smith 19661fd49c25SBarry Smith Not available from Fortran 19671fd49c25SBarry Smith 19682f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 19692f18eb33SBarry Smith 19702f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 19712f18eb33SBarry Smith 19722f18eb33SBarry Smith Level: advanced 19732f18eb33SBarry Smith 1974390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 19752f18eb33SBarry Smith @*/ 19762f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 19772f18eb33SBarry Smith { 1978bafee8b4SSatish Balay PetscInt64 r; 19792f18eb33SBarry Smith 1980bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 19812f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 19822f18eb33SBarry Smith return (PetscInt) r; 19832f18eb33SBarry Smith } 19842f18eb33SBarry Smith 1985f91af8c7SBarry Smith /*@C 1986f91af8c7SBarry Smith 1987f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 1988f91af8c7SBarry Smith 1989f91af8c7SBarry Smith Not Collective 1990f91af8c7SBarry Smith 1991f91af8c7SBarry Smith Input Parameter: 1992f91af8c7SBarry Smith + a - the PetscInt value 1993f91af8c7SBarry Smith - b - the second value 1994f91af8c7SBarry Smith 1995390e1bf2SBarry Smith Returns: 1996390e1bf2SBarry Smith the result as a PetscInt value 1997f91af8c7SBarry Smith 1998bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 1999f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2000f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2001f91af8c7SBarry Smith 2002f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2003f91af8c7SBarry Smith 2004f5f57ec0SBarry Smith Not available from Fortran 2005f5f57ec0SBarry Smith 2006f91af8c7SBarry Smith Level: advanced 2007f91af8c7SBarry Smith 2008390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2009f91af8c7SBarry Smith @*/ 2010f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2011f91af8c7SBarry Smith { 2012bafee8b4SSatish Balay PetscInt64 r; 2013f91af8c7SBarry Smith 2014bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2015f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2016f91af8c7SBarry Smith return (PetscInt) r; 2017f91af8c7SBarry Smith } 2018f91af8c7SBarry Smith 20192f18eb33SBarry Smith /*@C 20202f18eb33SBarry Smith 20212f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 20222f18eb33SBarry Smith 20232f18eb33SBarry Smith Not Collective 20242f18eb33SBarry Smith 20252f18eb33SBarry Smith Input Parameter: 20262f18eb33SBarry Smith + a - the PetscInt value 20272f18eb33SBarry Smith - b - the second value 20282f18eb33SBarry Smith 20292f18eb33SBarry Smith Output Parameter:ma 2030390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 20312f18eb33SBarry Smith 2032bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 20332f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 20342f18eb33SBarry Smith 2035f5f57ec0SBarry Smith Not available from Fortran 2036f5f57ec0SBarry Smith 2037220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 20382f18eb33SBarry Smith 20392f18eb33SBarry Smith Level: advanced 20402f18eb33SBarry Smith 2041220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 20422f18eb33SBarry Smith @*/ 20432f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 20442f18eb33SBarry Smith { 2045bafee8b4SSatish Balay PetscInt64 r; 20462f18eb33SBarry Smith 20472f18eb33SBarry Smith PetscFunctionBegin; 2048bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 20492f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 20502f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 20512f18eb33SBarry Smith #endif 2052f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2053f91af8c7SBarry Smith PetscFunctionReturn(0); 2054f91af8c7SBarry Smith } 2055f91af8c7SBarry Smith 2056f91af8c7SBarry Smith /*@C 2057f91af8c7SBarry Smith 2058fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2059f91af8c7SBarry Smith 2060f91af8c7SBarry Smith Not Collective 2061f91af8c7SBarry Smith 2062f91af8c7SBarry Smith Input Parameter: 2063f91af8c7SBarry Smith + a - the PetscInt value 2064f91af8c7SBarry Smith - b - the second value 2065f91af8c7SBarry Smith 2066f91af8c7SBarry Smith Output Parameter:ma 2067390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2068f91af8c7SBarry Smith 2069bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2070f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2071f91af8c7SBarry Smith 2072f5f57ec0SBarry Smith Not available from Fortran 2073f5f57ec0SBarry Smith 2074f91af8c7SBarry Smith Level: advanced 2075f91af8c7SBarry Smith 2076390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2077f91af8c7SBarry Smith @*/ 2078f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2079f91af8c7SBarry Smith { 2080bafee8b4SSatish Balay PetscInt64 r; 2081f91af8c7SBarry Smith 2082f91af8c7SBarry Smith PetscFunctionBegin; 2083bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2084f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2085f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2086f91af8c7SBarry Smith #endif 2087f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 20882f18eb33SBarry Smith PetscFunctionReturn(0); 20892f18eb33SBarry Smith } 2090c5df96a5SBarry Smith 2091d382aafbSBarry Smith /* 20922981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2093d382aafbSBarry Smith */ 2094d382aafbSBarry Smith #if defined(hz) 2095d382aafbSBarry Smith # undef hz 2096d382aafbSBarry Smith #endif 2097d382aafbSBarry Smith 2098d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2099d382aafbSBarry Smith 2100d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2101d382aafbSBarry Smith # include <limits.h> 2102d382aafbSBarry Smith #endif 2103d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2104d382aafbSBarry Smith # include <sys/param.h> 2105d382aafbSBarry Smith #endif 2106d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2107d382aafbSBarry Smith # include <sys/types.h> 2108d382aafbSBarry Smith #endif 2109d382aafbSBarry Smith #if defined(MAXPATHLEN) 2110d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2111d382aafbSBarry Smith #elif defined(MAX_PATH) 2112d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2113d382aafbSBarry Smith #elif defined(_MAX_PATH) 2114d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2115d382aafbSBarry Smith #else 2116d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2117d382aafbSBarry Smith #endif 2118d382aafbSBarry Smith 2119d382aafbSBarry Smith /*MC 2120d382aafbSBarry Smith 212166d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 212266d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 212366d79e26SBarry Smith 212466d79e26SBarry Smith 212566d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 212666d79e26SBarry Smith 212766d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 212866d79e26SBarry Smith 212966d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 213066d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 213166d79e26SBarry Smith 213266d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 213366d79e26SBarry Smith 213466d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 213566d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 213666d79e26SBarry Smith version number (x.y.z). 213766d79e26SBarry Smith 213866d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 213966d79e26SBarry Smith 214066d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 214166d79e26SBarry Smith 214266d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 214366d79e26SBarry Smith 214466d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 214566d79e26SBarry Smith 214666d79e26SBarry Smith Level: intermediate 214766d79e26SBarry Smith 214866d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 214966d79e26SBarry Smith 215066d79e26SBarry Smith M*/ 215166d79e26SBarry Smith 215266d79e26SBarry Smith /*MC 215366d79e26SBarry Smith 21541b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 21551b266c99SBarry Smith of every function and module definition you need something like 2156d382aafbSBarry Smith 2157d382aafbSBarry Smith $ 2158af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 21590f665fc7SPatrick Sanan $ use petscXXX 21601b266c99SBarry Smith 2161692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 21621b266c99SBarry Smith 2163d382aafbSBarry Smith $ XXX variablename 21641b266c99SBarry Smith $ type(tXXX) variablename 21651b266c99SBarry Smith 2166692afcd8SPatrick Sanan For example, 21671b266c99SBarry Smith 2168bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 21691b266c99SBarry Smith $ use petscvec 2170d382aafbSBarry Smith $ 2171692afcd8SPatrick Sanan $ Vec b 2172692afcd8SPatrick Sanan $ type(tVec) x 2173d382aafbSBarry Smith 2174d382aafbSBarry Smith Level: beginner 2175d382aafbSBarry Smith 2176d382aafbSBarry Smith M*/ 2177d382aafbSBarry Smith 2178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2180014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2181014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 218427710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 21855f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2186d382aafbSBarry Smith 2187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 218822ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 219060e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2191d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2193014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2194014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 21956c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 219617d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 219717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2198014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 21995569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2200014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 220117df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2202014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 220339f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2204014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2205745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 220639f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2207014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2208014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2209014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 22106c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 22116c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2212e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2213d382aafbSBarry Smith 2214014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2215014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2216d382aafbSBarry Smith 221776bdecfbSBarry Smith /*J 2218d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2219d382aafbSBarry Smith 2220d382aafbSBarry Smith Level: beginner 2221d382aafbSBarry Smith 2222e28ce29aSPatrick Sanan Notes: 2223e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 222425ccb61fSToby Isaac with the option --download-sprng or --download-random123 2225d382aafbSBarry Smith 22268f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 222776bdecfbSBarry Smith J*/ 222819fd82e9SBarry Smith typedef const char* PetscRandomType; 2229d382aafbSBarry Smith #define PETSCRAND "rand" 2230d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2231d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2232c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 223325ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2234d382aafbSBarry Smith 2235d382aafbSBarry Smith /* Logging support */ 2236014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2237d382aafbSBarry Smith 2238607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2239d382aafbSBarry Smith 2240d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2241140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2242d382aafbSBarry Smith 2243bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 224419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 224619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2247685405a1SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);} 2248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2249d382aafbSBarry Smith 2250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2259d382aafbSBarry Smith 2260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 226797540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 22688a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 226997540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2270d382aafbSBarry Smith 227130815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 227230815ce0SLisandro Dalcin 22739860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 22749860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool); 22769860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool); 2277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2284c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2285e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2286c891a504SStefano Zampini #endif 2287d382aafbSBarry Smith 2288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2291d382aafbSBarry Smith 2292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2298d382aafbSBarry Smith 2299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2304cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2305cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2306d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2307d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2308d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2309d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 23106afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 23116afbe7ddSJed Brown MPI_Request**,MPI_Request**, 23126afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 23136afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 23146afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2315d382aafbSBarry Smith 23166145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 23176145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 23186145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 23196145cd65SJed Brown 2320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2321d382aafbSBarry Smith 2322ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2323ce94432eSBarry Smith 232445487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 232545487dadSJed Brown 2326d382aafbSBarry Smith struct _n_PetscSubcomm { 2327d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2328d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2329306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 233045487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 233145487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2332708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 233345487dadSJed Brown PetscSubcommType type; 2334e5acf8a4SHong Zhang char *subcommprefix; 2335d382aafbSBarry Smith }; 2336d382aafbSBarry Smith 2337c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2338306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 233936be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 234465d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2345053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2346f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2347e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2348d382aafbSBarry Smith 23499962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 23509962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 23519962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 23529962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 23539962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 23549962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 23559962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 23569962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 23579962606eSBarry Smith 23585e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 23595f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 23605f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 23615f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 23625f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 23635e71baefSBarry Smith 2364a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2365a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2366a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2367a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2368a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2369a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2370a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2371a32e93adSJunchao Zhang 237213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 23730f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 237413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2375137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2376137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2377137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 237813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 237913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 23800f453b92SJed Brown 23815e71baefSBarry Smith 2382471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2383471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2384471ecdacSJed Brown * possible. */ 238535005c2bSLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,(size_t)count,(void**)slot);} 2386d382aafbSBarry Smith 23879de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 23889de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 23899de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 23909de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 23919de0f6ecSBarry Smith 2392ace2fbaeSBarry Smith #include <stdarg.h> 2393ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2394ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2395ace2fbaeSBarry Smith 2396268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2397fbfcfee5SBarry Smith 23981f817a21SBarry Smith /*@C 23991f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 24001f817a21SBarry Smith 24011f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 24021f817a21SBarry Smith 24031f817a21SBarry Smith Input Parameters: 24041f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 24051f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 24061f817a21SBarry Smith 2407850545d0SSatish Balay Level: intermediate 2408850545d0SSatish Balay 2409f5f57ec0SBarry Smith Not available from Fortran 2410f5f57ec0SBarry Smith 24111f817a21SBarry Smith Options Database: 2412063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 24131f817a21SBarry Smith @*/ 2414dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2415dff31646SBarry Smith { 2416dff31646SBarry Smith size_t len; 2417dff31646SBarry Smith char *vstring; 2418dff31646SBarry Smith PetscErrorCode ierr; 2419dff31646SBarry Smith 24201f817a21SBarry Smith PetscFunctionBegin; 24218d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2422dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 242335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2424dff31646SBarry Smith ierr = PetscMemcpy(vstring,cit,len);CHKERRQ(ierr); 2425dff31646SBarry Smith if (set) *set = PETSC_TRUE; 24261f817a21SBarry Smith PetscFunctionReturn(0); 2427dff31646SBarry Smith } 2428dff31646SBarry Smith 2429b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2430fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2431fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2432f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2433fe278a28SBarry Smith 2434f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2435f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2436b967cddfSBarry Smith 24379f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 24389f4d3c52SBarry Smith 243904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2440763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2441dff31646SBarry Smith 244268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 24435dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2444d382aafbSBarry Smith 2445b2566f29SBarry Smith 2446b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2447b2566f29SBarry Smith /* 2448b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2449b2566f29SBarry Smith */ 24508f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 245177a5e07dSBarry Smith 245277a5e07dSBarry Smith /*MC 245377a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 245477a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 245577a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 245677a5e07dSBarry Smith 245777a5e07dSBarry Smith Collective on MPI_Comm 245877a5e07dSBarry Smith 245977a5e07dSBarry Smith Synopsis: 246077a5e07dSBarry Smith #include <petscsys.h> 246177a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 246277a5e07dSBarry Smith 246377a5e07dSBarry Smith Input Parameters: 246477a5e07dSBarry Smith + indata - pointer to the input data to be reduced 246577a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 246677a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 246777a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 246877a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 246977a5e07dSBarry Smith 247077a5e07dSBarry Smith Output Parameter: 247177a5e07dSBarry Smith . outdata - the reduced values 247277a5e07dSBarry Smith 2473e28ce29aSPatrick Sanan Notes: 2474e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 247577a5e07dSBarry Smith 247677a5e07dSBarry Smith Level: developer 247777a5e07dSBarry Smith 247877a5e07dSBarry Smith .seealso: MPI_Allreduce() 247977a5e07dSBarry Smith M*/ 2480fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2481b2566f29SBarry Smith #else 2482b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2483b2566f29SBarry Smith #endif 2484b2566f29SBarry Smith 24856f7079ddSSatish Balay #if defined(PETSC_HAVE_MPI_WIN_CREATE_FEATURE) 24868198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 24878198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 24882f065d89SBarry Smith #endif 24898198064fSBarry Smith 249012801b39SBarry Smith /* 249112801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 249212801b39SBarry Smith */ 24938ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 24948ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 249512801b39SBarry Smith 2496d382aafbSBarry Smith #endif 2497