1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1720c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 1805035670SJunchao Zhang #define PETSC_HAVE_DEVICE 1905035670SJunchao Zhang #endif 2005035670SJunchao Zhang 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith /* 442c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 45d382aafbSBarry Smith */ 461ec50b02SJed Brown #if defined(__cplusplus) 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 481ec50b02SJed Brown #else 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 501ec50b02SJed Brown #endif 51d382aafbSBarry Smith 52c5e4d11fSDmitry Karpeev /* ========================================================================== */ 53c5e4d11fSDmitry Karpeev /* 54c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 551cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 561cc8b206SBarry Smith file within an extern "C". 57c5e4d11fSDmitry Karpeev */ 58c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 59c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 60c5e4d11fSDmitry Karpeev #endif 61c5e4d11fSDmitry Karpeev 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ed938b00SJed Brown #if defined(__cplusplus) 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 70ed938b00SJed Brown #else 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 72ed938b00SJed Brown #endif 73ed938b00SJed Brown 7458c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7558c433abSLisandro Dalcin 76ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 77014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 78014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8126703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8226703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8326703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 85014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 86014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 88d382aafbSBarry Smith #else 89014dd563SJed Brown # define PETSC_DLLEXPORT 90014dd563SJed Brown # define PETSC_DLLIMPORT 9121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 92014dd563SJed Brown #endif 93014dd563SJed Brown 94014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 96014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 98014dd563SJed Brown #endif 99014dd563SJed Brown 1001cc8b206SBarry Smith /* 1011cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1021cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1031cc8b206SBarry Smith used from C and are always visible in the shared libraries 1041cc8b206SBarry Smith */ 1052c280183SJed Brown #if defined(__cplusplus) 106014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10821f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 109014dd563SJed Brown #else 110014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 111638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1126258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 113d382aafbSBarry Smith #endif 11427710113SBarry Smith 1152c8e378dSBarry Smith #include <petscversion.h> 116a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 117d382aafbSBarry Smith 118d382aafbSBarry Smith /* ========================================================================== */ 119d382aafbSBarry Smith 120d382aafbSBarry Smith /* 121d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 122d382aafbSBarry Smith 123d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 124d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 125d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 126d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 127d382aafbSBarry Smith mpicxx.h directly in their code 128d382aafbSBarry Smith */ 129fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 130d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 131fa9e63e2SJed Brown #endif 132fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 133d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 134fa9e63e2SJed Brown #endif 135e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 136e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 137e771154cSJed Brown #else 1382c8e378dSBarry Smith # include <mpi.h> 139e771154cSJed Brown #endif 14065013866SBarry Smith 1414e1ad211SJed Brown /*MC 1424e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1434e1ad211SJed Brown 1444e1ad211SJed Brown Notes: 1451393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1461393a3abSPatrick Sanan 1474e1ad211SJed Brown Typical usage is within normal code, 1484e1ad211SJed Brown 1494e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1504e1ad211SJed Brown 1514e1ad211SJed Brown but can also be used in the preprocessor, 1524e1ad211SJed Brown 1534e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1544e1ad211SJed Brown $ ... 1554e1ad211SJed Brown $ #else 1564e1ad211SJed Brown 1571393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1584e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1594e1ad211SJed Brown 1601393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1611393a3abSPatrick Sanan 1621393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1631393a3abSPatrick Sanan 1644e1ad211SJed Brown Developer Notes: 1654e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1664e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1674e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1684e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1694e1ad211SJed Brown 1704e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1714e1ad211SJed Brown implementation of variadic macros. 1724e1ad211SJed Brown 1734e1ad211SJed Brown Level: developer 1744e1ad211SJed Brown M*/ 1754e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1764e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1774e1ad211SJed Brown # define PetscDefined_arg_ shift, 1784e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1794e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1804e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1814e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1824e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1834e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1844e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1854e1ad211SJed Brown #endif 1864e1ad211SJed Brown 187d382aafbSBarry Smith /* 188a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 189a7886beaSBarry Smith This usually happens because 190a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 191a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 192a7886beaSBarry Smith */ 193a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 194c9b973beSBarry Smith # if !defined(MPIUNI_H) 195a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 196a7886beaSBarry Smith # endif 19741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 19841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 19941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 20041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 20141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 20241f4af4cSSatish Balay # endif 20341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 20441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 20541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 20641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 20741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 20841f4af4cSSatish Balay # endif 209a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 21041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 211a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 212ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 213a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 214a7886beaSBarry Smith # endif 215a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 216a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 217a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 218ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 219c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 220a7886beaSBarry Smith # endif 221d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 222d97fd468SStefano Zampini # if !defined(MSMPI_VER) 223d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 224d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 225d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 226d97fd468SStefano Zampini # endif 227d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 228d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 229a7886beaSBarry Smith #endif 230a7886beaSBarry Smith 231a7886beaSBarry Smith /* 2322981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 233d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 234d382aafbSBarry Smith */ 235d382aafbSBarry Smith #include <stdio.h> 236d382aafbSBarry Smith 237d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 238d382aafbSBarry Smith #if !defined(MPIAPI) 239d382aafbSBarry Smith #define MPIAPI 240d382aafbSBarry Smith #endif 241d382aafbSBarry Smith 2421cc8b206SBarry Smith /* 2431cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2441cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2451cc8b206SBarry Smith does not match the actual type of the argument being passed in 2461cc8b206SBarry Smith */ 247c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 248894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 249894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2508ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2518ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 252894dd566SJed Brown # endif 253894dd566SJed Brown #endif 254894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 255894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2568ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2578ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 258894dd566SJed Brown #endif 259b3506946SBarry Smith 2605a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 261df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 262e28ce29aSPatrick Sanan 263e28ce29aSPatrick Sanan /*MC 264e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 265e28ce29aSPatrick Sanan 266e28ce29aSPatrick Sanan Notes: 267e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 268e28ce29aSPatrick Sanan 269e28ce29aSPatrick Sanan Level: beginner 270e28ce29aSPatrick Sanan 271e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 272e28ce29aSPatrick Sanan M*/ 273e28ce29aSPatrick Sanan 27437354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 275bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 276a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 277fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 278bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 279a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 280f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 281bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 282a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 283236ed0a3SSatish Balay #else 284bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 285236ed0a3SSatish Balay #endif 286b7b8f77aSBarry Smith 2877cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 288b7b8f77aSBarry Smith 289d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 290bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 291a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 292d382aafbSBarry Smith #else 293d382aafbSBarry Smith # define MPIU_INT MPI_INT 294a05e1a72SSatish Balay # define PetscInt_FMT "d" 295d382aafbSBarry Smith #endif 296d382aafbSBarry Smith 297503cfb0cSBarry Smith /* 298503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 299503cfb0cSBarry Smith */ 300e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 301d382aafbSBarry Smith 302d382aafbSBarry Smith /* 303d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 304d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 305d382aafbSBarry Smith */ 306014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 307d382aafbSBarry Smith 308d382aafbSBarry Smith /* 309d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 310d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 311d382aafbSBarry Smith */ 312014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 313d382aafbSBarry Smith 314d382aafbSBarry Smith /*MC 315d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 316d382aafbSBarry Smith 317d382aafbSBarry Smith Synopsis: 318aaa7dc30SBarry Smith #include <petscsys.h> 319ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 320d382aafbSBarry Smith 321eca87e8dSBarry Smith Not Collective 322eca87e8dSBarry Smith 323d382aafbSBarry Smith Input Parameters: 324d382aafbSBarry Smith . cond - condition or expression 325d382aafbSBarry Smith 326e28ce29aSPatrick Sanan Notes: 327e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 328d382aafbSBarry Smith branch is unlikely. 329d382aafbSBarry Smith 330d382aafbSBarry Smith Level: advanced 331d382aafbSBarry Smith 332cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 333d382aafbSBarry Smith M*/ 334d382aafbSBarry Smith 335d382aafbSBarry Smith /*MC 336d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 337d382aafbSBarry Smith 338d382aafbSBarry Smith Synopsis: 339aaa7dc30SBarry Smith #include <petscsys.h> 34023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 341d382aafbSBarry Smith 342eca87e8dSBarry Smith Not Collective 343eca87e8dSBarry Smith 344d382aafbSBarry Smith Input Parameters: 345d382aafbSBarry Smith . cond - condition or expression 346d382aafbSBarry Smith 347e28ce29aSPatrick Sanan Notes: 348e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 349d382aafbSBarry Smith branch is likely. 350d382aafbSBarry Smith 351d382aafbSBarry Smith Level: advanced 352d382aafbSBarry Smith 353d382aafbSBarry Smith .seealso: PetscUnlikely() 354d382aafbSBarry Smith M*/ 355d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 356d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 357d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 358d382aafbSBarry Smith #else 359cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 360cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 361d382aafbSBarry Smith #endif 362d382aafbSBarry Smith 363cf9c20a2SJed Brown /*MC 364cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 365cf9c20a2SJed Brown 366cf9c20a2SJed Brown Synopsis: 367cf9c20a2SJed Brown #include <petscsys.h> 368cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 369cf9c20a2SJed Brown 370cf9c20a2SJed Brown Not Collective 371cf9c20a2SJed Brown 372cf9c20a2SJed Brown Input Parameters: 373cf9c20a2SJed Brown . cond - condition or expression 374cf9c20a2SJed Brown 375cf9c20a2SJed Brown Notes: 376cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 377cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 378cf9c20a2SJed Brown 379cf9c20a2SJed Brown Level: advanced 380cf9c20a2SJed Brown 381cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 382cf9c20a2SJed Brown M*/ 383cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 384cf9c20a2SJed Brown 385c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 386c8b9133aSSatish Balay 387c8b9133aSSatish Balay #if defined(__INTEL_COMPILER) && !defined(_WIN32) 388c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 3891dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 390c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 391160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 392c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 393160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 394160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 395c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 396c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 397c8b9133aSSatish Balay #else 398c8b9133aSSatish Balay # define PetscPragmaSIMD 399c8b9133aSSatish Balay #endif 400c8b9133aSSatish Balay 401d382aafbSBarry Smith /* 402d382aafbSBarry Smith Declare extern C stuff after including external header files 403d382aafbSBarry Smith */ 404d382aafbSBarry Smith 4056a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 40670b3c8c7SBarry Smith 4078b49ba18SBarry Smith /* 408390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4098b49ba18SBarry Smith */ 4108b49ba18SBarry Smith #include <petscmath.h> 4118b49ba18SBarry Smith 4126a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 413d382aafbSBarry Smith 414d382aafbSBarry Smith /*MC 4150298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 416d382aafbSBarry Smith 417d382aafbSBarry Smith Level: beginner 418d382aafbSBarry Smith 419e28ce29aSPatrick Sanan Note: 420e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 421d382aafbSBarry Smith some default 422d382aafbSBarry Smith 423e28ce29aSPatrick Sanan Fortran Notes: 424e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 425d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 426d382aafbSBarry Smith 427e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 428d382aafbSBarry Smith 429d382aafbSBarry Smith M*/ 4300298fd71SBarry Smith #define PETSC_IGNORE NULL 431d382aafbSBarry Smith 432c528d872SBarry Smith /* This is deprecated */ 433c528d872SBarry Smith #define PETSC_NULL NULL 434c528d872SBarry Smith 435d382aafbSBarry Smith /*MC 436557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 437557d4da8SBarry Smith where you wish PETSc to use the default. 438557d4da8SBarry Smith 439557d4da8SBarry Smith Level: beginner 440557d4da8SBarry Smith 441e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 442557d4da8SBarry Smith 443557d4da8SBarry Smith M*/ 444557d4da8SBarry Smith #define PETSC_DECIDE -1 445557d4da8SBarry Smith 446557d4da8SBarry Smith /*MC 447d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 448d382aafbSBarry Smith where you wish PETSc to compute the required value. 449d382aafbSBarry Smith 450d382aafbSBarry Smith Level: beginner 451d382aafbSBarry Smith 452e28ce29aSPatrick Sanan Developer Note: 453e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 454557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 455557d4da8SBarry Smith 4560298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 459d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 460d382aafbSBarry Smith 461d382aafbSBarry Smith /*MC 462557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 463557d4da8SBarry Smith where you wish PETSc to use the default. 464557d4da8SBarry Smith 465557d4da8SBarry Smith Level: beginner 466557d4da8SBarry Smith 467e28ce29aSPatrick Sanan Fortran Notes: 468e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 469557d4da8SBarry Smith 4700298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 471557d4da8SBarry Smith 472557d4da8SBarry Smith M*/ 473557d4da8SBarry Smith #define PETSC_DEFAULT -2 474557d4da8SBarry Smith 475557d4da8SBarry Smith /*MC 476d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 477ea8fe74dSBarry Smith all the processes that PETSc knows about. 478d382aafbSBarry Smith 479d382aafbSBarry Smith Level: beginner 480d382aafbSBarry Smith 481e28ce29aSPatrick Sanan Notes: 482e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 483d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 484d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 485a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 486a990b902SBarry Smith 487a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 488a990b902SBarry Smith is called because it may not have a valid value yet. 489d382aafbSBarry Smith 490d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 491d382aafbSBarry Smith 492d382aafbSBarry Smith M*/ 493014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 494d382aafbSBarry Smith 495d382aafbSBarry Smith /*MC 496503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 497d382aafbSBarry Smith 498d382aafbSBarry Smith Level: beginner 499d382aafbSBarry Smith 500e28ce29aSPatrick Sanan Notes: 501e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 502a990b902SBarry Smith 503d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 504d382aafbSBarry Smith 505d382aafbSBarry Smith M*/ 506d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 507d382aafbSBarry Smith 5086de5d289SStefano Zampini /*MC 5096de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5106de5d289SStefano Zampini MPI with MPI_Init_thread. 5116de5d289SStefano Zampini 5126de5d289SStefano Zampini Level: beginner 5136de5d289SStefano Zampini 5146de5d289SStefano Zampini Notes: 5156de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5166de5d289SStefano Zampini 5176de5d289SStefano Zampini .seealso: PetscInitialize() 5186de5d289SStefano Zampini 5196de5d289SStefano Zampini M*/ 5206de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5216de5d289SStefano Zampini 522d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5238ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 524014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 525014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5264cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 527d382aafbSBarry Smith 528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 531d382aafbSBarry Smith 5327381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 53305035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 534cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5353c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5367381773fSBarry Smith #endif 5377381773fSBarry Smith 53805035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 53905035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 54005035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5413c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 54205035670SJunchao Zhang #endif 54305035670SJunchao Zhang 54459e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 54559e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 54659e55d94SJunchao Zhang #endif 54759e55d94SJunchao Zhang 548540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 549540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 550540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 551540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 552540e20f2SPierre Jolivet #endif 553540e20f2SPierre Jolivet 554d382aafbSBarry Smith /*MC 55595dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 556d382aafbSBarry Smith 557eca87e8dSBarry Smith Synopsis: 558aaa7dc30SBarry Smith #include <petscsys.h> 559eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 560eca87e8dSBarry Smith 561eca87e8dSBarry Smith Not Collective 562eca87e8dSBarry Smith 563d382aafbSBarry Smith Input Parameter: 564d382aafbSBarry Smith . m - number of bytes to allocate 565d382aafbSBarry Smith 566d382aafbSBarry Smith Output Parameter: 567d382aafbSBarry Smith . result - memory allocated 568d382aafbSBarry Smith 569d382aafbSBarry Smith Level: beginner 570d382aafbSBarry Smith 57149d7da52SJed Brown Notes: 57249d7da52SJed Brown Memory is always allocated at least double aligned 573d382aafbSBarry Smith 57449d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 575d382aafbSBarry Smith 576d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 577d382aafbSBarry Smith 578d382aafbSBarry Smith M*/ 579071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 580d382aafbSBarry Smith 581d382aafbSBarry Smith /*MC 5823221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5833221ece2SMatthew G. Knepley 5843221ece2SMatthew G. Knepley Synopsis: 5853221ece2SMatthew G. Knepley #include <petscsys.h> 5863221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5873221ece2SMatthew G. Knepley 5883221ece2SMatthew G. Knepley Not Collective 5893221ece2SMatthew G. Knepley 5903221ece2SMatthew G. Knepley Input Parameters: 5913221ece2SMatthew G. Knepley + m - number of bytes to allocate 59292f119d6SBarry Smith - result - previous memory 5933221ece2SMatthew G. Knepley 5943221ece2SMatthew G. Knepley Output Parameter: 5953221ece2SMatthew G. Knepley . result - new memory allocated 5963221ece2SMatthew G. Knepley 5973221ece2SMatthew G. Knepley Level: developer 5983221ece2SMatthew G. Knepley 5993221ece2SMatthew G. Knepley Notes: 6003221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6013221ece2SMatthew G. Knepley 6023221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6033221ece2SMatthew G. Knepley 6043221ece2SMatthew G. Knepley M*/ 6053221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6063221ece2SMatthew G. Knepley 6073221ece2SMatthew G. Knepley /*MC 608503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 609d382aafbSBarry Smith 610d382aafbSBarry Smith Synopsis: 611aaa7dc30SBarry Smith #include <petscsys.h> 612d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 613d382aafbSBarry Smith 614eca87e8dSBarry Smith Not Collective 615eca87e8dSBarry Smith 616eca87e8dSBarry Smith Input Parameters: 617eca87e8dSBarry Smith . addr - address to align (any pointer type) 618eca87e8dSBarry Smith 619d382aafbSBarry Smith Level: developer 620d382aafbSBarry Smith 621d382aafbSBarry Smith .seealso: PetscMallocAlign() 622d382aafbSBarry Smith 623d382aafbSBarry Smith M*/ 624d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 625d382aafbSBarry Smith 626d382aafbSBarry Smith /*MC 627*8f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 628*8f51dc47SJunchao Zhang 629*8f51dc47SJunchao Zhang Synopsis: 630*8f51dc47SJunchao Zhang #include <petscsys.h> 631*8f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 632*8f51dc47SJunchao Zhang 633*8f51dc47SJunchao Zhang Not Collective 634*8f51dc47SJunchao Zhang 635*8f51dc47SJunchao Zhang Input Parameter: 636*8f51dc47SJunchao Zhang . m - number of bytes to allocate 637*8f51dc47SJunchao Zhang 638*8f51dc47SJunchao Zhang Output Parameter: 639*8f51dc47SJunchao Zhang . result - memory allocated 640*8f51dc47SJunchao Zhang 641*8f51dc47SJunchao Zhang Level: beginner 642*8f51dc47SJunchao Zhang 643*8f51dc47SJunchao Zhang Notes: 644*8f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 645*8f51dc47SJunchao Zhang 646*8f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 647*8f51dc47SJunchao Zhang 648*8f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 649*8f51dc47SJunchao Zhang 650*8f51dc47SJunchao Zhang M*/ 651*8f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 652*8f51dc47SJunchao Zhang 653*8f51dc47SJunchao Zhang /*MC 654785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 655d382aafbSBarry Smith 656eca87e8dSBarry Smith Synopsis: 657aaa7dc30SBarry Smith #include <petscsys.h> 658785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 659785e854fSJed Brown 660785e854fSJed Brown Not Collective 661785e854fSJed Brown 662785e854fSJed Brown Input Parameter: 663390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 664785e854fSJed Brown 665785e854fSJed Brown Output Parameter: 6661fe1b817SJunchao Zhang . r1 - memory allocated 667785e854fSJed Brown 668e28ce29aSPatrick Sanan Note: 669e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 670390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 671390e1bf2SBarry Smith $ PetscInt *id; 672390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 673390e1bf2SBarry Smith not 674390e1bf2SBarry Smith $ PetscInt *id; 675390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 676390e1bf2SBarry Smith 6771fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 678390e1bf2SBarry Smith 679390e1bf2SBarry Smith Level: beginner 680785e854fSJed Brown 6811795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 682785e854fSJed Brown 683785e854fSJed Brown M*/ 6842553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 685785e854fSJed Brown 686785e854fSJed Brown /*MC 6871795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6881795a4d1SJed Brown 6891795a4d1SJed Brown Synopsis: 690aaa7dc30SBarry Smith #include <petscsys.h> 6911795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6921795a4d1SJed Brown 6931795a4d1SJed Brown Not Collective 6941795a4d1SJed Brown 6951795a4d1SJed Brown Input Parameter: 6961795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6971795a4d1SJed Brown 6981795a4d1SJed Brown Output Parameter: 6991fe1b817SJunchao Zhang . r1 - memory allocated 7001795a4d1SJed Brown 701e28ce29aSPatrick Sanan Notes: 702e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 703390e1bf2SBarry Smith 704390e1bf2SBarry Smith Level: beginner 7051795a4d1SJed Brown 7061795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7071795a4d1SJed Brown 7081795a4d1SJed Brown M*/ 7092553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7101795a4d1SJed Brown 7111795a4d1SJed Brown /*MC 712dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 713d382aafbSBarry Smith 714eca87e8dSBarry Smith Synopsis: 715aaa7dc30SBarry Smith #include <petscsys.h> 716dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 717eca87e8dSBarry Smith 718eca87e8dSBarry Smith Not Collective 719eca87e8dSBarry Smith 720d382aafbSBarry Smith Input Parameter: 721d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 722dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 723d382aafbSBarry Smith 724d382aafbSBarry Smith Output Parameter: 725d382aafbSBarry Smith + r1 - memory allocated in first chunk 726d382aafbSBarry Smith - r2 - memory allocated in second chunk 727d382aafbSBarry Smith 728d382aafbSBarry Smith Level: developer 729d382aafbSBarry Smith 7301795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 731d382aafbSBarry Smith 732d382aafbSBarry Smith M*/ 7332553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 734d382aafbSBarry Smith 735d382aafbSBarry Smith /*MC 7361795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 737d382aafbSBarry Smith 738eca87e8dSBarry Smith Synopsis: 739aaa7dc30SBarry Smith #include <petscsys.h> 7401795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 741eca87e8dSBarry Smith 742eca87e8dSBarry Smith Not Collective 743eca87e8dSBarry Smith 744d382aafbSBarry Smith Input Parameter: 745d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7461795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7471795a4d1SJed Brown 7481795a4d1SJed Brown Output Parameter: 7491795a4d1SJed Brown + r1 - memory allocated in first chunk 7501795a4d1SJed Brown - r2 - memory allocated in second chunk 7511795a4d1SJed Brown 7521795a4d1SJed Brown Level: developer 7531795a4d1SJed Brown 7541795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7551795a4d1SJed Brown 7561795a4d1SJed Brown M*/ 7572553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7581795a4d1SJed Brown 7591795a4d1SJed Brown /*MC 760dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 761d382aafbSBarry Smith 762d382aafbSBarry Smith Synopsis: 763aaa7dc30SBarry Smith #include <petscsys.h> 764dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 765d382aafbSBarry Smith 766d382aafbSBarry Smith Not Collective 767d382aafbSBarry Smith 768d382aafbSBarry Smith Input Parameter: 769d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 770d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 771dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 772d382aafbSBarry Smith 773d382aafbSBarry Smith Output Parameter: 774d382aafbSBarry Smith + r1 - memory allocated in first chunk 775d382aafbSBarry Smith . r2 - memory allocated in second chunk 776d382aafbSBarry Smith - r3 - memory allocated in third chunk 777d382aafbSBarry Smith 778d382aafbSBarry Smith Level: developer 779d382aafbSBarry Smith 7801795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 781d382aafbSBarry Smith 782d382aafbSBarry Smith M*/ 7832553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 784d382aafbSBarry Smith 785d382aafbSBarry Smith /*MC 7861795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 787d382aafbSBarry Smith 788eca87e8dSBarry Smith Synopsis: 789aaa7dc30SBarry Smith #include <petscsys.h> 7901795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 791eca87e8dSBarry Smith 792eca87e8dSBarry Smith Not Collective 793eca87e8dSBarry Smith 794d382aafbSBarry Smith Input Parameter: 795d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 796d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7971795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7981795a4d1SJed Brown 7991795a4d1SJed Brown Output Parameter: 8001795a4d1SJed Brown + r1 - memory allocated in first chunk 8011795a4d1SJed Brown . r2 - memory allocated in second chunk 8021795a4d1SJed Brown - r3 - memory allocated in third chunk 8031795a4d1SJed Brown 8041795a4d1SJed Brown Level: developer 8051795a4d1SJed Brown 8061795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8071795a4d1SJed Brown 8081795a4d1SJed Brown M*/ 8092553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8101795a4d1SJed Brown 8111795a4d1SJed Brown /*MC 812dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 813d382aafbSBarry Smith 814d382aafbSBarry Smith Synopsis: 815aaa7dc30SBarry Smith #include <petscsys.h> 816dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 817d382aafbSBarry Smith 818d382aafbSBarry Smith Not Collective 819d382aafbSBarry Smith 820d382aafbSBarry Smith Input Parameter: 821d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 822d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 823d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 824dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 825d382aafbSBarry Smith 826d382aafbSBarry Smith Output Parameter: 827d382aafbSBarry Smith + r1 - memory allocated in first chunk 828d382aafbSBarry Smith . r2 - memory allocated in second chunk 829d382aafbSBarry Smith . r3 - memory allocated in third chunk 830d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 831d382aafbSBarry Smith 832d382aafbSBarry Smith Level: developer 833d382aafbSBarry Smith 8341795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 835d382aafbSBarry Smith 836d382aafbSBarry Smith M*/ 8372553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 838d382aafbSBarry Smith 839d382aafbSBarry Smith /*MC 8401795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 841d382aafbSBarry Smith 842eca87e8dSBarry Smith Synopsis: 843aaa7dc30SBarry Smith #include <petscsys.h> 8441795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 845eca87e8dSBarry Smith 846eca87e8dSBarry Smith Not Collective 847eca87e8dSBarry Smith 848e28ce29aSPatrick Sanan Input Parameters: 849d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 850d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 851d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8521795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8531795a4d1SJed Brown 854e28ce29aSPatrick Sanan Output Parameters: 8551795a4d1SJed Brown + r1 - memory allocated in first chunk 8561795a4d1SJed Brown . r2 - memory allocated in second chunk 8571795a4d1SJed Brown . r3 - memory allocated in third chunk 8581795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8591795a4d1SJed Brown 8601795a4d1SJed Brown Level: developer 8611795a4d1SJed Brown 8621795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8631795a4d1SJed Brown 8641795a4d1SJed Brown M*/ 8652553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8661795a4d1SJed Brown 8671795a4d1SJed Brown /*MC 868dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 869d382aafbSBarry Smith 870d382aafbSBarry Smith Synopsis: 871aaa7dc30SBarry Smith #include <petscsys.h> 872dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 873d382aafbSBarry Smith 874d382aafbSBarry Smith Not Collective 875d382aafbSBarry Smith 876e28ce29aSPatrick Sanan Input Parameters: 877d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 878d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 879d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 880d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 881dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 882d382aafbSBarry Smith 883e28ce29aSPatrick Sanan Output Parameters: 884d382aafbSBarry Smith + r1 - memory allocated in first chunk 885d382aafbSBarry Smith . r2 - memory allocated in second chunk 886d382aafbSBarry Smith . r3 - memory allocated in third chunk 887d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 888d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 889d382aafbSBarry Smith 890d382aafbSBarry Smith Level: developer 891d382aafbSBarry Smith 8921795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 893d382aafbSBarry Smith 894d382aafbSBarry Smith M*/ 8952553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 896d382aafbSBarry Smith 897d382aafbSBarry Smith /*MC 8981795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 899d382aafbSBarry Smith 900eca87e8dSBarry Smith Synopsis: 901aaa7dc30SBarry Smith #include <petscsys.h> 9021795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 903eca87e8dSBarry Smith 904eca87e8dSBarry Smith Not Collective 905eca87e8dSBarry Smith 906e28ce29aSPatrick Sanan Input Parameters: 907d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 908d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 909d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 910d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9111795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9121795a4d1SJed Brown 913e28ce29aSPatrick Sanan Output Parameters: 9141795a4d1SJed Brown + r1 - memory allocated in first chunk 9151795a4d1SJed Brown . r2 - memory allocated in second chunk 9161795a4d1SJed Brown . r3 - memory allocated in third chunk 9171795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9181795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9191795a4d1SJed Brown 9201795a4d1SJed Brown Level: developer 9211795a4d1SJed Brown 9221795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9231795a4d1SJed Brown 9241795a4d1SJed Brown M*/ 9252553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 926d382aafbSBarry Smith 927d382aafbSBarry Smith /*MC 928dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 929d382aafbSBarry Smith 930d382aafbSBarry Smith Synopsis: 931aaa7dc30SBarry Smith #include <petscsys.h> 932dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 933d382aafbSBarry Smith 934d382aafbSBarry Smith Not Collective 935d382aafbSBarry Smith 936e28ce29aSPatrick Sanan Input Parameters: 937d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 938d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 939d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 940d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 941d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 942dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 943d382aafbSBarry Smith 944e28ce29aSPatrick Sanan Output Parameteasr: 945d382aafbSBarry Smith + r1 - memory allocated in first chunk 946d382aafbSBarry Smith . r2 - memory allocated in second chunk 947d382aafbSBarry Smith . r3 - memory allocated in third chunk 948d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 949d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 950d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 951d382aafbSBarry Smith 952d382aafbSBarry Smith Level: developer 953d382aafbSBarry Smith 9541795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 955d382aafbSBarry Smith 956d382aafbSBarry Smith M*/ 9572553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 958d382aafbSBarry Smith 959d382aafbSBarry Smith /*MC 9601795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 961d382aafbSBarry Smith 962eca87e8dSBarry Smith Synopsis: 963aaa7dc30SBarry Smith #include <petscsys.h> 9641795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 965eca87e8dSBarry Smith 966eca87e8dSBarry Smith Not Collective 967eca87e8dSBarry Smith 968e28ce29aSPatrick Sanan Input Parameters: 969d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 970d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 971d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 972d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 973d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9741795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9751795a4d1SJed Brown 976e28ce29aSPatrick Sanan Output Parameters: 9771795a4d1SJed Brown + r1 - memory allocated in first chunk 9781795a4d1SJed Brown . r2 - memory allocated in second chunk 9791795a4d1SJed Brown . r3 - memory allocated in third chunk 9801795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9811795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9821795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9831795a4d1SJed Brown 9841795a4d1SJed Brown Level: developer 9851795a4d1SJed Brown 9861795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9871795a4d1SJed Brown 9881795a4d1SJed Brown M*/ 9892553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9901795a4d1SJed Brown 9911795a4d1SJed Brown /*MC 992dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 993d382aafbSBarry Smith 994d382aafbSBarry Smith Synopsis: 995aaa7dc30SBarry Smith #include <petscsys.h> 996dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 997d382aafbSBarry Smith 998d382aafbSBarry Smith Not Collective 999d382aafbSBarry Smith 1000e28ce29aSPatrick Sanan Input Parameters: 1001d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1002d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1003d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1004d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1005d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1006d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1007dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1008d382aafbSBarry Smith 1009e28ce29aSPatrick Sanan Output Parameters: 1010d382aafbSBarry Smith + r1 - memory allocated in first chunk 1011d382aafbSBarry Smith . r2 - memory allocated in second chunk 1012d382aafbSBarry Smith . r3 - memory allocated in third chunk 1013d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1014d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1015d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1016eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1017d382aafbSBarry Smith 1018d382aafbSBarry Smith Level: developer 1019d382aafbSBarry Smith 10201795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1021d382aafbSBarry Smith 1022d382aafbSBarry Smith M*/ 10232553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1024d382aafbSBarry Smith 1025d382aafbSBarry Smith /*MC 10261795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10271795a4d1SJed Brown 10281795a4d1SJed Brown Synopsis: 1029aaa7dc30SBarry Smith #include <petscsys.h> 10301795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10311795a4d1SJed Brown 10321795a4d1SJed Brown Not Collective 10331795a4d1SJed Brown 1034e28ce29aSPatrick Sanan Input Parameters: 10351795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10361795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10371795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10381795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10391795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10401795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10411795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10421795a4d1SJed Brown 1043e28ce29aSPatrick Sanan Output Parameters: 10441795a4d1SJed Brown + r1 - memory allocated in first chunk 10451795a4d1SJed Brown . r2 - memory allocated in second chunk 10461795a4d1SJed Brown . r3 - memory allocated in third chunk 10471795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10481795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10491795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10501795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10511795a4d1SJed Brown 10521795a4d1SJed Brown Level: developer 10531795a4d1SJed Brown 10541795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10551795a4d1SJed Brown 10561795a4d1SJed Brown M*/ 10572553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10581795a4d1SJed Brown 10591795a4d1SJed Brown /*MC 1060503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1061d382aafbSBarry Smith 1062eca87e8dSBarry Smith Synopsis: 1063aaa7dc30SBarry Smith #include <petscsys.h> 1064b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1065eca87e8dSBarry Smith 1066eca87e8dSBarry Smith Not Collective 1067eca87e8dSBarry Smith 1068d382aafbSBarry Smith Output Parameter: 1069b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1070d382aafbSBarry Smith 1071d382aafbSBarry Smith Level: beginner 1072d382aafbSBarry Smith 1073390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1074d382aafbSBarry Smith 1075d382aafbSBarry Smith M*/ 1076b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1077ad0619ddSBarry Smith 1078ad0619ddSBarry Smith /*MC 1079b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1080ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1081ad0619ddSBarry Smith 1082ad0619ddSBarry Smith Synopsis: 1083aaa7dc30SBarry Smith #include <petscsys.h> 1084b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1085ad0619ddSBarry Smith 1086ad0619ddSBarry Smith Not Collective 1087ad0619ddSBarry Smith 1088ad0619ddSBarry Smith Input Parameter: 1089b00a9115SJed Brown . obj - object memory is logged to 1090ad0619ddSBarry Smith 1091ad0619ddSBarry Smith Output Parameter: 1092b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1093ad0619ddSBarry Smith 1094ad0619ddSBarry Smith Level: developer 1095ad0619ddSBarry Smith 1096390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1097ad0619ddSBarry Smith 1098ad0619ddSBarry Smith M*/ 1099d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1100d382aafbSBarry Smith 1101d382aafbSBarry Smith /*MC 1102d382aafbSBarry Smith PetscFree - Frees memory 1103d382aafbSBarry Smith 1104eca87e8dSBarry Smith Synopsis: 1105aaa7dc30SBarry Smith #include <petscsys.h> 1106eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1107eca87e8dSBarry Smith 1108eca87e8dSBarry Smith Not Collective 1109eca87e8dSBarry Smith 1110d382aafbSBarry Smith Input Parameter: 11117f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1112d382aafbSBarry Smith 1113d382aafbSBarry Smith Level: beginner 1114d382aafbSBarry Smith 111549d7da52SJed Brown Notes: 1116390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1117390e1bf2SBarry Smith 111849d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1119d382aafbSBarry Smith 1120390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1121d382aafbSBarry Smith 1122d382aafbSBarry Smith M*/ 1123ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1124d382aafbSBarry Smith 1125d382aafbSBarry Smith /*MC 1126d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1127d382aafbSBarry Smith 1128eca87e8dSBarry Smith Synopsis: 1129aaa7dc30SBarry Smith #include <petscsys.h> 1130eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1131eca87e8dSBarry Smith 1132eca87e8dSBarry Smith Not Collective 1133eca87e8dSBarry Smith 1134e28ce29aSPatrick Sanan Input Parameters: 1135d382aafbSBarry Smith + memory1 - memory to free 1136d382aafbSBarry Smith - memory2 - 2nd memory to free 1137d382aafbSBarry Smith 1138d382aafbSBarry Smith Level: developer 1139d382aafbSBarry Smith 114095452b02SPatrick Sanan Notes: 114195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1142d382aafbSBarry Smith 1143d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1144d382aafbSBarry Smith 1145d382aafbSBarry Smith M*/ 1146ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1147d382aafbSBarry Smith 1148d382aafbSBarry Smith /*MC 1149d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1150d382aafbSBarry Smith 1151eca87e8dSBarry Smith Synopsis: 1152aaa7dc30SBarry Smith #include <petscsys.h> 1153eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1154eca87e8dSBarry Smith 1155eca87e8dSBarry Smith Not Collective 1156eca87e8dSBarry Smith 1157e28ce29aSPatrick Sanan Input Parameters: 1158d382aafbSBarry Smith + memory1 - memory to free 1159d382aafbSBarry Smith . memory2 - 2nd memory to free 1160d382aafbSBarry Smith - memory3 - 3rd memory to free 1161d382aafbSBarry Smith 1162d382aafbSBarry Smith Level: developer 1163d382aafbSBarry Smith 116495452b02SPatrick Sanan Notes: 116595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1166d382aafbSBarry Smith 1167d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1168d382aafbSBarry Smith 1169d382aafbSBarry Smith M*/ 1170ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1171d382aafbSBarry Smith 1172d382aafbSBarry Smith /*MC 1173d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1174d382aafbSBarry Smith 1175eca87e8dSBarry Smith Synopsis: 1176aaa7dc30SBarry Smith #include <petscsys.h> 1177eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1178eca87e8dSBarry Smith 1179eca87e8dSBarry Smith Not Collective 1180eca87e8dSBarry Smith 1181e28ce29aSPatrick Sanan Input Parameters: 1182d382aafbSBarry Smith + m1 - memory to free 1183d382aafbSBarry Smith . m2 - 2nd memory to free 1184d382aafbSBarry Smith . m3 - 3rd memory to free 1185d382aafbSBarry Smith - m4 - 4th memory to free 1186d382aafbSBarry Smith 1187d382aafbSBarry Smith Level: developer 1188d382aafbSBarry Smith 118995452b02SPatrick Sanan Notes: 119095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1191d382aafbSBarry Smith 1192d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1193d382aafbSBarry Smith 1194d382aafbSBarry Smith M*/ 1195ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1196d382aafbSBarry Smith 1197d382aafbSBarry Smith /*MC 1198d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1199d382aafbSBarry Smith 1200eca87e8dSBarry Smith Synopsis: 1201aaa7dc30SBarry Smith #include <petscsys.h> 1202eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1203eca87e8dSBarry Smith 1204eca87e8dSBarry Smith Not Collective 1205eca87e8dSBarry Smith 1206e28ce29aSPatrick Sanan Input Parameters: 1207d382aafbSBarry Smith + m1 - memory to free 1208d382aafbSBarry Smith . m2 - 2nd memory to free 1209d382aafbSBarry Smith . m3 - 3rd memory to free 1210d382aafbSBarry Smith . m4 - 4th memory to free 1211d382aafbSBarry Smith - m5 - 5th memory to free 1212d382aafbSBarry Smith 1213d382aafbSBarry Smith Level: developer 1214d382aafbSBarry Smith 121595452b02SPatrick Sanan Notes: 121695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1217d382aafbSBarry Smith 1218d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1219d382aafbSBarry Smith 1220d382aafbSBarry Smith M*/ 1221ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1222d382aafbSBarry Smith 1223d382aafbSBarry Smith /*MC 1224d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1225d382aafbSBarry Smith 1226eca87e8dSBarry Smith Synopsis: 1227aaa7dc30SBarry Smith #include <petscsys.h> 1228eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1229eca87e8dSBarry Smith 1230eca87e8dSBarry Smith Not Collective 1231eca87e8dSBarry Smith 1232e28ce29aSPatrick Sanan Input Parameters: 1233d382aafbSBarry Smith + m1 - memory to free 1234d382aafbSBarry Smith . m2 - 2nd memory to free 1235d382aafbSBarry Smith . m3 - 3rd memory to free 1236d382aafbSBarry Smith . m4 - 4th memory to free 1237d382aafbSBarry Smith . m5 - 5th memory to free 1238d382aafbSBarry Smith - m6 - 6th memory to free 1239d382aafbSBarry Smith 1240d382aafbSBarry Smith 1241d382aafbSBarry Smith Level: developer 1242d382aafbSBarry Smith 124395452b02SPatrick Sanan Notes: 124495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1245d382aafbSBarry Smith 1246d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1247d382aafbSBarry Smith 1248d382aafbSBarry Smith M*/ 1249ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1250d382aafbSBarry Smith 1251d382aafbSBarry Smith /*MC 1252d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1253d382aafbSBarry Smith 1254eca87e8dSBarry Smith Synopsis: 1255aaa7dc30SBarry Smith #include <petscsys.h> 1256eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1257eca87e8dSBarry Smith 1258eca87e8dSBarry Smith Not Collective 1259eca87e8dSBarry Smith 1260e28ce29aSPatrick Sanan Input Parameters: 1261d382aafbSBarry Smith + m1 - memory to free 1262d382aafbSBarry Smith . m2 - 2nd memory to free 1263d382aafbSBarry Smith . m3 - 3rd memory to free 1264d382aafbSBarry Smith . m4 - 4th memory to free 1265d382aafbSBarry Smith . m5 - 5th memory to free 1266d382aafbSBarry Smith . m6 - 6th memory to free 1267d382aafbSBarry Smith - m7 - 7th memory to free 1268d382aafbSBarry Smith 1269d382aafbSBarry Smith 1270d382aafbSBarry Smith Level: developer 1271d382aafbSBarry Smith 127295452b02SPatrick Sanan Notes: 127395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1274d382aafbSBarry Smith 1275d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1276d382aafbSBarry Smith PetscMalloc7() 1277d382aafbSBarry Smith 1278d382aafbSBarry Smith M*/ 1279ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1280d382aafbSBarry Smith 1281ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1282ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1283071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1284efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12853221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1286ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 128792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1289d382aafbSBarry Smith 1290d382aafbSBarry Smith /* 1291c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1292c1706be6SHong Zhang */ 1293c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1294c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 129531f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 129631f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 129731f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 129831f06eaaSHong Zhang #endif 129959af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 130059af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 130159af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 130259af0bd3SScott Kruger #endif 130359af0bd3SScott Kruger 1304c1706be6SHong Zhang 1305a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 130636763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1307a5057860SBarry Smith 1308a5057860SBarry Smith /* 130966d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1310d382aafbSBarry Smith */ 1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 131292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1315e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1316e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 131792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 131892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1319efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 132092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 132192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1322608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1323608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1324d382aafbSBarry Smith 13256a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13298e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1330d382aafbSBarry Smith 1331d382aafbSBarry Smith /* 1332d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1333d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1334d382aafbSBarry Smith functionality and/or error checking. 1335d382aafbSBarry Smith */ 1336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1338d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1346a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13502f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13552c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 135847340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13596fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13606991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13616991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1363d382aafbSBarry Smith 1364573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1365573b0fb4SBarry Smith 1366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1369d382aafbSBarry Smith 1370e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1371a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1372a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1373a53986e1SJed Brown 1374d382aafbSBarry Smith /* 1375d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1376d382aafbSBarry Smith */ 1377367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1378570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1379de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1380014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1381014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1382d9822059SBarry Smith #else 1383de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1384d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1385d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1386d9822059SBarry Smith #endif 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1388d382aafbSBarry Smith 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1391eb3f98d2SBarry Smith 139295c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1393d6a4318aSJed Brown 1394639ff905SBarry Smith /* 1395639ff905SBarry Smith Defines PETSc error handling. 1396639ff905SBarry Smith */ 1397639ff905SBarry Smith #include <petscerror.h> 1398d382aafbSBarry Smith 13990700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1400014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1401014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 140381256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 140481256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 140581256985SMatthew G. Knepley 1406d382aafbSBarry Smith 1407d382aafbSBarry Smith /* 1408d382aafbSBarry Smith Routines that get memory usage information from the OS 1409d382aafbSBarry Smith */ 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1413b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1414d382aafbSBarry Smith 1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1416d382aafbSBarry Smith 1417d382aafbSBarry Smith /* 1418d382aafbSBarry Smith Initialization of PETSc 1419d382aafbSBarry Smith */ 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1430d382aafbSBarry Smith 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1432607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1433d382aafbSBarry Smith 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1438d382aafbSBarry Smith 1439a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1440a50e088cSMatthew G. Knepley 1441a50e088cSMatthew G. Knepley 1442d382aafbSBarry Smith /* 1443d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14442981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1445d382aafbSBarry Smith */ 1446638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1447638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1448638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1449d382aafbSBarry Smith 1450d382aafbSBarry Smith /* 1451d382aafbSBarry Smith Functions that can act on any PETSc object. 1452d382aafbSBarry Smith */ 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1471bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1472bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14750eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14760eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1478d382aafbSBarry Smith 1479665c2dedSJed Brown #include <petscviewertypes.h> 1480639ff905SBarry Smith #include <petscoptions.h> 1481639ff905SBarry Smith 1482608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1483608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1484608c71bfSMatthew G. Knepley 14850633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14860633abcbSJed Brown 1487c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1488dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1489639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14900005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14910005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1499685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15024099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1504b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1507d382aafbSBarry Smith 1508e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15097aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1510e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1511e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1512e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1513e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1514e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1515e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1516e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1517e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1518e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 151915681b3cSBarry Smith 1520ec7429eaSBarry Smith #else 15217aab2a10SBarry Smith #define PetscSAWsBlock() 0 1522e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1523e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1524e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1525e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1526e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1527e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1528e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1529e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1530e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 153115681b3cSBarry Smith 1532ec7429eaSBarry Smith #endif 1533b90c6cbeSBarry Smith 153482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 153582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 153682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 15377d5d4d99SBarry Smith 15385fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1539a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15405fe58b6fSBarry Smith #endif 15417eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1542a64a8e02SBarry Smith 1543140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1544140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1545140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1546140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1547140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1548140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1549d382aafbSBarry Smith 1550d382aafbSBarry Smith /* 1551503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1552d382aafbSBarry Smith link libraries that will be loaded as needed. 1553d382aafbSBarry Smith */ 1554a240a19fSJed Brown 1555a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1556a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1557140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15581c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15591c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 156044ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1561140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1562140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1563140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1564d382aafbSBarry Smith 1565014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1571014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1573d382aafbSBarry Smith 1574d382aafbSBarry Smith /* 1575d382aafbSBarry Smith Useful utility routines 1576d382aafbSBarry Smith */ 1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1579d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 15846ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 15856ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1586d382aafbSBarry Smith 158764ac3b0dSPatrick Sanan /*MC 1588ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1589503cfb0cSBarry Smith 1590e28ce29aSPatrick Sanan Notes: 1591e28ce29aSPatrick Sanan This is useful in cases like 1592503cfb0cSBarry Smith $ int *a; 1593ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 15941cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 159564ac3b0dSPatrick Sanan 159664ac3b0dSPatrick Sanan Level: beginner 159764ac3b0dSPatrick Sanan 159864ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 159964ac3b0dSPatrick Sanan M*/ 1600d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1601503cfb0cSBarry Smith 1602d382aafbSBarry Smith /*MC 1603d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1604d382aafbSBarry Smith 1605d382aafbSBarry Smith Synopsis: 1606aaa7dc30SBarry Smith #include <petscsys.h> 1607659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1608d382aafbSBarry Smith 1609659f7ba0SBarry Smith Collective on comm 1610eca87e8dSBarry Smith 1611d382aafbSBarry Smith Input Parameters: 1612659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1613d382aafbSBarry Smith . format - the usual printf() format string 1614659f7ba0SBarry Smith - args - arguments to be printed 1615d382aafbSBarry Smith 1616d382aafbSBarry Smith Level: developer 1617d382aafbSBarry Smith 1618d382aafbSBarry Smith Fortran Note: 1619d382aafbSBarry Smith This routine is not supported in Fortran. 1620d382aafbSBarry Smith 1621659f7ba0SBarry Smith Note: 1622659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1623659f7ba0SBarry Smith 1624659f7ba0SBarry Smith To use, write your own function, for example, 1625659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1626659f7ba0SBarry Smith ${ 1627659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1628659f7ba0SBarry Smith $} 1629659f7ba0SBarry Smith then do the assigment 1630659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1631659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1632659f7ba0SBarry Smith 1633659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1634d382aafbSBarry Smith 1635d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1636d382aafbSBarry Smith M*/ 1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1638d382aafbSBarry Smith 1639fcfd50ebSBarry Smith /* 1640fcfd50ebSBarry Smith Defines PETSc profiling. 1641fcfd50ebSBarry Smith */ 16422c8e378dSBarry Smith #include <petsclog.h> 1643fcfd50ebSBarry Smith 1644fcfd50ebSBarry Smith /* 1645fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1646fcfd50ebSBarry Smith */ 1647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16541b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1655fcfd50ebSBarry Smith 1656014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1659d382aafbSBarry Smith 1660d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1661d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1662d781fa04SBarry Smith 1663d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1664014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1665016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 166674ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1667d382aafbSBarry Smith #endif 1668d382aafbSBarry Smith 1669014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1670014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 16710ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1672014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1673014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1674014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1675014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1676d382aafbSBarry Smith 1677014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1678014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1679014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1683b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1684d382aafbSBarry Smith 1685d382aafbSBarry Smith /* 1686d382aafbSBarry Smith For use in debuggers 1687d382aafbSBarry Smith */ 1688014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1689014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1693d382aafbSBarry Smith 1694a663daf8SBarry Smith #include <stddef.h> 1695a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1696d382aafbSBarry Smith #include <stdlib.h> 16976c7e564aSBarry Smith 16984a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1699d382aafbSBarry Smith #include <xmmintrin.h> 1700d382aafbSBarry Smith #endif 1701d382aafbSBarry Smith 1702d382aafbSBarry Smith /*@C 1703580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1704580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1705580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1706580bdb30SBarry Smith 1707580bdb30SBarry Smith Not Collective 1708580bdb30SBarry Smith 1709580bdb30SBarry Smith Input Parameters: 1710580bdb30SBarry Smith + b - pointer to initial memory space 1711580bdb30SBarry Smith . a - pointer to copy space 1712580bdb30SBarry Smith - n - length (in bytes) of space to copy 1713580bdb30SBarry Smith 1714580bdb30SBarry Smith Level: intermediate 1715580bdb30SBarry Smith 1716580bdb30SBarry Smith Note: 1717857a15f1SBarry Smith PetscArraymove() is preferred 1718580bdb30SBarry Smith This routine is analogous to memmove(). 1719580bdb30SBarry Smith 1720580bdb30SBarry Smith Developers Note: This is inlined for performance 1721580bdb30SBarry Smith 1722580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1723580bdb30SBarry Smith PetscArraymove() 1724580bdb30SBarry Smith @*/ 1725580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1726580bdb30SBarry Smith { 1727580bdb30SBarry Smith PetscFunctionBegin; 1728580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1729580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1730580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1731580bdb30SBarry Smith if (a < b) { 1732580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1733580bdb30SBarry Smith else { 1734580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1735580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1736580bdb30SBarry Smith } 1737580bdb30SBarry Smith } else { 1738580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1739580bdb30SBarry Smith else { 1740580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1741580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1742580bdb30SBarry Smith } 1743580bdb30SBarry Smith } 1744580bdb30SBarry Smith #else 1745580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1746580bdb30SBarry Smith #endif 1747580bdb30SBarry Smith PetscFunctionReturn(0); 1748580bdb30SBarry Smith } 1749580bdb30SBarry Smith 1750d382aafbSBarry Smith /*@C 1751d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1752d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1753d382aafbSBarry Smith PetscMemmove() in that case. 1754d382aafbSBarry Smith 1755d382aafbSBarry Smith Not Collective 1756d382aafbSBarry Smith 1757d382aafbSBarry Smith Input Parameters: 1758d382aafbSBarry Smith + b - pointer to initial memory space 1759d382aafbSBarry Smith - n - length (in bytes) of space to copy 1760d382aafbSBarry Smith 1761d382aafbSBarry Smith Output Parameter: 1762d382aafbSBarry Smith . a - pointer to copy space 1763d382aafbSBarry Smith 1764d382aafbSBarry Smith Level: intermediate 1765d382aafbSBarry Smith 1766d382aafbSBarry Smith Compile Option: 1767d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1768d382aafbSBarry Smith for memory copies on double precision values. 1769d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1770d382aafbSBarry Smith for memory copies on double precision values. 1771d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1772d382aafbSBarry Smith for memory copies on double precision values. 1773d382aafbSBarry Smith 1774d382aafbSBarry Smith Note: 1775580bdb30SBarry Smith Prefer PetscArraycpy() 1776d382aafbSBarry Smith This routine is analogous to memcpy(). 17771fd49c25SBarry Smith Not available from Fortran 17781fd49c25SBarry Smith 1779f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1780f5f57ec0SBarry Smith 1781580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1782d382aafbSBarry Smith 1783d382aafbSBarry Smith @*/ 17847087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1785d382aafbSBarry Smith { 1786d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1787c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1788c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1789a7e36092SMatthew G Knepley PetscFunctionBegin; 1790e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1791e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1792a7e36092SMatthew G Knepley #else 1793d382aafbSBarry Smith PetscFunctionBegin; 1794a7e36092SMatthew G Knepley #endif 1795a47a537aSLisandro Dalcin if (a != b && n > 0) { 1796d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1797e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1798d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1799d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1800d382aafbSBarry Smith #endif 1801d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1802c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1803d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1804d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1805c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1806c5df96a5SBarry Smith PetscErrorCode ierr; 1807c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18088b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1809d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1810d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1811d382aafbSBarry Smith #else 1812d382aafbSBarry Smith size_t i; 1813d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1814d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1815d382aafbSBarry Smith #endif 1816d382aafbSBarry Smith } else { 1817d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1818d382aafbSBarry Smith } 1819d382aafbSBarry Smith #else 1820d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1821d382aafbSBarry Smith #endif 1822d382aafbSBarry Smith } 1823d382aafbSBarry Smith PetscFunctionReturn(0); 1824d382aafbSBarry Smith } 1825d382aafbSBarry Smith 1826d382aafbSBarry Smith /*@C 1827d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1828d382aafbSBarry Smith 1829d382aafbSBarry Smith Not Collective 1830d382aafbSBarry Smith 1831d382aafbSBarry Smith Input Parameters: 1832d382aafbSBarry Smith + a - pointer to beginning memory location 1833d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1834d382aafbSBarry Smith 1835d382aafbSBarry Smith Level: intermediate 1836d382aafbSBarry Smith 1837d382aafbSBarry Smith Compile Option: 1838d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1839d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1840d382aafbSBarry Smith 18411fd49c25SBarry Smith Not available from Fortran 1842857a15f1SBarry Smith Prefer PetscArrayzero() 18431fd49c25SBarry Smith 1844503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1845503cfb0cSBarry Smith 1846580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1847d382aafbSBarry Smith @*/ 18487087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1849d382aafbSBarry Smith { 1850d382aafbSBarry Smith if (n > 0) { 1851d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 185218703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1853d382aafbSBarry Smith #endif 1854d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1855d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1856d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1857d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1858d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1859d382aafbSBarry Smith } else { 1860d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1861d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1862d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1863d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1864d382aafbSBarry Smith } else { 1865d382aafbSBarry Smith #endif 1866d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1867d382aafbSBarry Smith bzero((char *)a,n); 1868d382aafbSBarry Smith #else 1869d382aafbSBarry Smith memset((char*)a,0,n); 1870d382aafbSBarry Smith #endif 1871d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1872d382aafbSBarry Smith } 1873d382aafbSBarry Smith #endif 1874d382aafbSBarry Smith } 1875d382aafbSBarry Smith return 0; 1876d382aafbSBarry Smith } 1877d382aafbSBarry Smith 1878d382aafbSBarry Smith /*MC 1879580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1880580bdb30SBarry Smith 1881580bdb30SBarry Smith Synopsis: 1882580bdb30SBarry Smith #include <petscsys.h> 1883580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1884580bdb30SBarry Smith 1885580bdb30SBarry Smith Not Collective 1886580bdb30SBarry Smith 1887580bdb30SBarry Smith Input Parameters: 1888580bdb30SBarry Smith + str1 - First array 1889580bdb30SBarry Smith . str2 - Second array 1890580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1891580bdb30SBarry Smith 1892580bdb30SBarry Smith Output Parameters: 1893580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1894580bdb30SBarry Smith 1895580bdb30SBarry Smith Level: intermediate 1896580bdb30SBarry Smith 1897580bdb30SBarry Smith Note: 1898857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1899580bdb30SBarry Smith The arrays must be of the same type 1900580bdb30SBarry Smith 1901580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1902580bdb30SBarry Smith PetscArraymove() 1903580bdb30SBarry Smith M*/ 19049e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1905580bdb30SBarry Smith 19068f8f2f0dSBarry Smith /*MC 1907580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1908580bdb30SBarry Smith do not overlap 1909580bdb30SBarry Smith 1910580bdb30SBarry Smith Synopsis: 1911580bdb30SBarry Smith #include <petscsys.h> 1912580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1913580bdb30SBarry Smith 1914580bdb30SBarry Smith Not Collective 1915580bdb30SBarry Smith 1916580bdb30SBarry Smith Input Parameters: 1917580bdb30SBarry Smith + str1 - First array 1918580bdb30SBarry Smith . str2 - Second array 1919580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1920580bdb30SBarry Smith 1921580bdb30SBarry Smith Level: intermediate 1922580bdb30SBarry Smith 1923580bdb30SBarry Smith Note: 1924857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1925580bdb30SBarry Smith The arrays must be of the same type 1926580bdb30SBarry Smith 1927580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1928580bdb30SBarry Smith M*/ 19299e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1930580bdb30SBarry Smith 19318f8f2f0dSBarry Smith /*MC 1932580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1933580bdb30SBarry Smith 1934580bdb30SBarry Smith Synopsis: 1935580bdb30SBarry Smith #include <petscsys.h> 1936580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1937580bdb30SBarry Smith 1938580bdb30SBarry Smith Not Collective 1939580bdb30SBarry Smith 1940580bdb30SBarry Smith Input Parameters: 1941de25709eSStefano Zampini + str1 - First array (destination) 1942de25709eSStefano Zampini . str2 - Second array (source) 1943580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1944580bdb30SBarry Smith 1945580bdb30SBarry Smith Level: intermediate 1946580bdb30SBarry Smith 1947580bdb30SBarry Smith Note: 1948857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1949580bdb30SBarry Smith The arrays must be of the same type 1950580bdb30SBarry Smith 1951580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1952580bdb30SBarry Smith M*/ 19539e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1954580bdb30SBarry Smith 19558f8f2f0dSBarry Smith /*MC 1956580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1957580bdb30SBarry Smith 1958580bdb30SBarry Smith Synopsis: 1959580bdb30SBarry Smith #include <petscsys.h> 1960580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1961580bdb30SBarry Smith 1962580bdb30SBarry Smith Not Collective 1963580bdb30SBarry Smith 1964580bdb30SBarry Smith Input Parameters: 1965580bdb30SBarry Smith + str1 - array 1966580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1967580bdb30SBarry Smith 1968580bdb30SBarry Smith Level: intermediate 1969580bdb30SBarry Smith 1970580bdb30SBarry Smith Note: 1971857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1972580bdb30SBarry Smith 1973580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1974580bdb30SBarry Smith M*/ 19759e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1976580bdb30SBarry Smith 1977d382aafbSBarry Smith /*MC 1978d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1979d382aafbSBarry Smith 1980eca87e8dSBarry Smith Synopsis: 1981aaa7dc30SBarry Smith #include <petscsys.h> 1982eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1983eca87e8dSBarry Smith 1984d382aafbSBarry Smith Not Collective 1985d382aafbSBarry Smith 1986d382aafbSBarry Smith Input Parameters: 1987d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1988d382aafbSBarry Smith . n - number of elements to fetch 1989d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 199050d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1991d382aafbSBarry Smith 1992d382aafbSBarry Smith Level: developer 1993d382aafbSBarry Smith 1994d382aafbSBarry Smith Notes: 1995d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1996d382aafbSBarry Smith 199750d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 199850d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 199950d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 200063cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 200163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 200263cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2003d382aafbSBarry Smith 2004d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2005d382aafbSBarry Smith address). 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith M*/ 2008d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2009d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2010d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2011d382aafbSBarry Smith } while (0) 2012d382aafbSBarry Smith 2013d382aafbSBarry Smith /* 2014d382aafbSBarry Smith Determine if some of the kernel computation routines use 2015d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2016d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2017d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2018e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2019d382aafbSBarry Smith */ 2020d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2021d382aafbSBarry Smith 2022d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2023d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2024d382aafbSBarry Smith #endif 2025d382aafbSBarry Smith 20265a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20275a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2028d382aafbSBarry Smith #endif 2029d382aafbSBarry Smith 2030d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2031d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2032d382aafbSBarry Smith #endif 2033d382aafbSBarry Smith 2034d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2035d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2036d382aafbSBarry Smith #endif 2037d382aafbSBarry Smith 2038d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2039d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2040d382aafbSBarry Smith #endif 2041d382aafbSBarry Smith 2042d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2043d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2044d382aafbSBarry Smith #endif 2045d382aafbSBarry Smith 2046d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2047d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2048d382aafbSBarry Smith #endif 2049d382aafbSBarry Smith 2050d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2051d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2052d382aafbSBarry Smith #endif 2053d382aafbSBarry Smith 2054d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2055d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2056d382aafbSBarry Smith #endif 2057d382aafbSBarry Smith 2058d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2059d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2060d382aafbSBarry Smith #endif 2061d382aafbSBarry Smith 2062d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2063d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2064d382aafbSBarry Smith #endif 2065d382aafbSBarry Smith 2066d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2067d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2068d382aafbSBarry Smith #endif 2069d382aafbSBarry Smith 2070d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2071d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2072d382aafbSBarry Smith #endif 2073d382aafbSBarry Smith 2074d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2075d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2076d382aafbSBarry Smith #endif 2077d382aafbSBarry Smith 2078d382aafbSBarry Smith #endif 2079d382aafbSBarry Smith 2080d382aafbSBarry Smith /* 2081d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2082d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2083d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2084d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2085d382aafbSBarry Smith ugly extern "C" {} wrappers. 2086d382aafbSBarry Smith */ 2087d382aafbSBarry Smith #if defined(__cplusplus) 2088d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2089d382aafbSBarry Smith # define EXTERN_C_END } 2090d382aafbSBarry Smith #else 2091d382aafbSBarry Smith # define EXTERN_C_BEGIN 2092d382aafbSBarry Smith # define EXTERN_C_END 2093d382aafbSBarry Smith #endif 2094d382aafbSBarry Smith 2095d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2096d382aafbSBarry Smith 2097d382aafbSBarry Smith /*MC 2098d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2099d382aafbSBarry Smith communication 2100d382aafbSBarry Smith 2101d382aafbSBarry Smith Level: beginner 2102d382aafbSBarry Smith 2103d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2104d382aafbSBarry Smith 2105d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2106d382aafbSBarry Smith M*/ 2107d382aafbSBarry Smith 2108d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2109014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2110014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2111c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2112c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2113c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2114c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2115d382aafbSBarry Smith #endif 2116d382aafbSBarry Smith 2117d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2118d382aafbSBarry Smith 2119d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2120d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2121d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2122d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2123d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2124d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2125d382aafbSBarry Smith 212661b0d812SBarry Smith /*@C 2127c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2128c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2129c73702f5SBarry Smith 2130c73702f5SBarry Smith Not Collective 2131c73702f5SBarry Smith 2132c73702f5SBarry Smith Input Parameter: 2133c73702f5SBarry Smith . a - the PetscInt64 value 2134c73702f5SBarry Smith 2135c73702f5SBarry Smith Output Parameter: 2136c73702f5SBarry Smith . b - the resulting PetscInt value 2137c73702f5SBarry Smith 2138c73702f5SBarry Smith Level: advanced 2139c73702f5SBarry Smith 2140c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2141c73702f5SBarry Smith 2142c73702f5SBarry Smith Not available from Fortran 2143c73702f5SBarry Smith 214461778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2145c73702f5SBarry Smith @*/ 2146c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2147c73702f5SBarry Smith { 2148c73702f5SBarry Smith PetscFunctionBegin; 2149c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2150c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2151c73702f5SBarry Smith #endif 2152c73702f5SBarry Smith *b = (PetscInt)(a); 2153c73702f5SBarry Smith PetscFunctionReturn(0); 2154c73702f5SBarry Smith } 2155c73702f5SBarry Smith 2156c73702f5SBarry Smith /*@C 215761b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 215861b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 215961b0d812SBarry Smith 216061b0d812SBarry Smith Not Collective 216161b0d812SBarry Smith 216261b0d812SBarry Smith Input Parameter: 216361b0d812SBarry Smith . a - the PetscInt value 216461b0d812SBarry Smith 216561b0d812SBarry Smith Output Parameter: 216661b0d812SBarry Smith . b - the resulting PetscBLASInt value 216761b0d812SBarry Smith 216861b0d812SBarry Smith Level: advanced 216961b0d812SBarry Smith 21700bc7d38cSBarry Smith Notes: 21711fd49c25SBarry Smith Not available from Fortran 2172f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 21731fd49c25SBarry Smith 2174c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 217561b0d812SBarry Smith @*/ 2176c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2177c5df96a5SBarry Smith { 2178c5df96a5SBarry Smith PetscFunctionBegin; 2179c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 218073f49a0bSSatish Balay *b = 0; 218161778c46SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array is too long for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running"); 2182c5df96a5SBarry Smith #endif 21830bc7d38cSBarry Smith if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2184c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2185c5df96a5SBarry Smith PetscFunctionReturn(0); 2186c5df96a5SBarry Smith } 2187c5df96a5SBarry Smith 218861b0d812SBarry Smith /*@C 218961b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 219061b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 219161b0d812SBarry Smith 219261b0d812SBarry Smith Not Collective 219361b0d812SBarry Smith 219461b0d812SBarry Smith Input Parameter: 219561b0d812SBarry Smith . a - the PetscInt value 219661b0d812SBarry Smith 219761b0d812SBarry Smith Output Parameter: 219861b0d812SBarry Smith . b - the resulting PetscMPIInt value 219961b0d812SBarry Smith 220061b0d812SBarry Smith Level: advanced 220161b0d812SBarry Smith 22021fd49c25SBarry Smith Not available from Fortran 22031fd49c25SBarry Smith 2204c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 220561b0d812SBarry Smith @*/ 22064dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22074dc2109aSBarry Smith { 22084dc2109aSBarry Smith PetscFunctionBegin; 22094dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 221073f49a0bSSatish Balay *b = 0; 221161778c46SBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI, which is restricted to 32 bit integers"); 22124dc2109aSBarry Smith #endif 2213c73702f5SBarry Smith *b = (PetscMPIInt)(a); 22144dc2109aSBarry Smith PetscFunctionReturn(0); 22154dc2109aSBarry Smith } 22164dc2109aSBarry Smith 2217bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 22182f18eb33SBarry Smith 22192f18eb33SBarry Smith /*@C 22202f18eb33SBarry Smith 22212f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22222f18eb33SBarry Smith 22232f18eb33SBarry Smith Not Collective 22242f18eb33SBarry Smith 22252f18eb33SBarry Smith Input Parameter: 22262f18eb33SBarry Smith + a - the PetscReal value 22272f18eb33SBarry Smith - b - the second value 22282f18eb33SBarry Smith 2229390e1bf2SBarry Smith Returns: 2230390e1bf2SBarry Smith the result as a PetscInt value 22312f18eb33SBarry Smith 2232bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22332f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22342f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22352f18eb33SBarry Smith 2236e28ce29aSPatrick Sanan Developers Note: 2237e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22382f18eb33SBarry Smith 22392f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22402f18eb33SBarry Smith 22411fd49c25SBarry Smith Not available from Fortran 22421fd49c25SBarry Smith 22432f18eb33SBarry Smith Level: advanced 22442f18eb33SBarry Smith 224561778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 22462f18eb33SBarry Smith @*/ 22472f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 22482f18eb33SBarry Smith { 2249bafee8b4SSatish Balay PetscInt64 r; 22502f18eb33SBarry Smith 2251bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 22522f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22532f18eb33SBarry Smith return (PetscInt) r; 22542f18eb33SBarry Smith } 22552f18eb33SBarry Smith 22562f18eb33SBarry Smith /*@C 22572f18eb33SBarry Smith 22582f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 22592f18eb33SBarry Smith 22602f18eb33SBarry Smith Not Collective 22612f18eb33SBarry Smith 22622f18eb33SBarry Smith Input Parameter: 22632f18eb33SBarry Smith + a - the PetscInt value 22642f18eb33SBarry Smith - b - the second value 22652f18eb33SBarry Smith 2266390e1bf2SBarry Smith Returns: 2267390e1bf2SBarry Smith the result as a PetscInt value 22682f18eb33SBarry Smith 2269bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22702f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 22712f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22722f18eb33SBarry Smith 22731fd49c25SBarry Smith Not available from Fortran 22741fd49c25SBarry Smith 22752f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22762f18eb33SBarry Smith 22772f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22782f18eb33SBarry Smith 22792f18eb33SBarry Smith Level: advanced 22802f18eb33SBarry Smith 228161778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 22822f18eb33SBarry Smith @*/ 22832f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 22842f18eb33SBarry Smith { 2285bafee8b4SSatish Balay PetscInt64 r; 22862f18eb33SBarry Smith 2287bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22882f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22892f18eb33SBarry Smith return (PetscInt) r; 22902f18eb33SBarry Smith } 22912f18eb33SBarry Smith 2292f91af8c7SBarry Smith /*@C 2293f91af8c7SBarry Smith 2294f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2295f91af8c7SBarry Smith 2296f91af8c7SBarry Smith Not Collective 2297f91af8c7SBarry Smith 2298f91af8c7SBarry Smith Input Parameter: 2299f91af8c7SBarry Smith + a - the PetscInt value 2300f91af8c7SBarry Smith - b - the second value 2301f91af8c7SBarry Smith 2302390e1bf2SBarry Smith Returns: 2303390e1bf2SBarry Smith the result as a PetscInt value 2304f91af8c7SBarry Smith 2305bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2306f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2307f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2308f91af8c7SBarry Smith 2309f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2310f91af8c7SBarry Smith 2311f5f57ec0SBarry Smith Not available from Fortran 2312f5f57ec0SBarry Smith 2313f91af8c7SBarry Smith Level: advanced 2314f91af8c7SBarry Smith 231561778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2316f91af8c7SBarry Smith @*/ 2317f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2318f91af8c7SBarry Smith { 2319bafee8b4SSatish Balay PetscInt64 r; 2320f91af8c7SBarry Smith 2321bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2322f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2323f91af8c7SBarry Smith return (PetscInt) r; 2324f91af8c7SBarry Smith } 2325f91af8c7SBarry Smith 23262f18eb33SBarry Smith /*@C 23272f18eb33SBarry Smith 23282f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23292f18eb33SBarry Smith 23302f18eb33SBarry Smith Not Collective 23312f18eb33SBarry Smith 23322f18eb33SBarry Smith Input Parameter: 23332f18eb33SBarry Smith + a - the PetscInt value 23342f18eb33SBarry Smith - b - the second value 23352f18eb33SBarry Smith 23362f18eb33SBarry Smith Output Parameter:ma 2337390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 23382f18eb33SBarry Smith 2339bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 23402f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 23412f18eb33SBarry Smith 2342f5f57ec0SBarry Smith Not available from Fortran 2343f5f57ec0SBarry Smith 2344220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 23452f18eb33SBarry Smith 23462f18eb33SBarry Smith Level: advanced 23472f18eb33SBarry Smith 2348220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 23492f18eb33SBarry Smith @*/ 23502f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 23512f18eb33SBarry Smith { 2352bafee8b4SSatish Balay PetscInt64 r; 23532f18eb33SBarry Smith 23542f18eb33SBarry Smith PetscFunctionBegin; 2355bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23562f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 235761778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 23582f18eb33SBarry Smith #endif 2359f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2360f91af8c7SBarry Smith PetscFunctionReturn(0); 2361f91af8c7SBarry Smith } 2362f91af8c7SBarry Smith 2363f91af8c7SBarry Smith /*@C 2364f91af8c7SBarry Smith 2365fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2366f91af8c7SBarry Smith 2367f91af8c7SBarry Smith Not Collective 2368f91af8c7SBarry Smith 2369f91af8c7SBarry Smith Input Parameter: 2370f91af8c7SBarry Smith + a - the PetscInt value 2371f91af8c7SBarry Smith - b - the second value 2372f91af8c7SBarry Smith 2373f91af8c7SBarry Smith Output Parameter:ma 2374390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2375f91af8c7SBarry Smith 2376bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2377f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2378f91af8c7SBarry Smith 2379f5f57ec0SBarry Smith Not available from Fortran 2380f5f57ec0SBarry Smith 2381f91af8c7SBarry Smith Level: advanced 2382f91af8c7SBarry Smith 238361778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2384f91af8c7SBarry Smith @*/ 2385f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2386f91af8c7SBarry Smith { 2387bafee8b4SSatish Balay PetscInt64 r; 2388f91af8c7SBarry Smith 2389f91af8c7SBarry Smith PetscFunctionBegin; 2390bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2391f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 239261778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2393f91af8c7SBarry Smith #endif 2394f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 23952f18eb33SBarry Smith PetscFunctionReturn(0); 23962f18eb33SBarry Smith } 2397c5df96a5SBarry Smith 2398d382aafbSBarry Smith /* 23992981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2400d382aafbSBarry Smith */ 2401d382aafbSBarry Smith #if defined(hz) 2402d382aafbSBarry Smith # undef hz 2403d382aafbSBarry Smith #endif 2404d382aafbSBarry Smith 240515a5570dSLisandro Dalcin #include <limits.h> 240615a5570dSLisandro Dalcin 240715a5570dSLisandro Dalcin /* The number of bits in a byte */ 240815a5570dSLisandro Dalcin 240915a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 241015a5570dSLisandro Dalcin 2411d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2412d382aafbSBarry Smith # include <sys/types.h> 2413d382aafbSBarry Smith #endif 2414d382aafbSBarry Smith 2415d382aafbSBarry Smith /*MC 2416d382aafbSBarry Smith 241766d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 241866d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 241966d79e26SBarry Smith 242066d79e26SBarry Smith 242166d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 242266d79e26SBarry Smith 242366d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 242466d79e26SBarry Smith 242566d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 242666d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 242766d79e26SBarry Smith 242866d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 242966d79e26SBarry Smith 243066d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 243166d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 243266d79e26SBarry Smith version number (x.y.z). 243366d79e26SBarry Smith 243466d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 243566d79e26SBarry Smith 243666d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 243766d79e26SBarry Smith 243866d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 243966d79e26SBarry Smith 244066d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 244166d79e26SBarry Smith 244266d79e26SBarry Smith Level: intermediate 244366d79e26SBarry Smith 244466d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 244566d79e26SBarry Smith 244666d79e26SBarry Smith M*/ 244766d79e26SBarry Smith 244866d79e26SBarry Smith /*MC 244966d79e26SBarry Smith 24501b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 24511b266c99SBarry Smith of every function and module definition you need something like 2452d382aafbSBarry Smith 2453d382aafbSBarry Smith $ 2454af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 24550f665fc7SPatrick Sanan $ use petscXXX 24561b266c99SBarry Smith 2457692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 24581b266c99SBarry Smith 2459d382aafbSBarry Smith $ XXX variablename 24601b266c99SBarry Smith $ type(tXXX) variablename 24611b266c99SBarry Smith 2462692afcd8SPatrick Sanan For example, 24631b266c99SBarry Smith 2464bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 24651b266c99SBarry Smith $ use petscvec 2466d382aafbSBarry Smith $ 2467692afcd8SPatrick Sanan $ Vec b 2468692afcd8SPatrick Sanan $ type(tVec) x 2469d382aafbSBarry Smith 2470d382aafbSBarry Smith Level: beginner 2471d382aafbSBarry Smith 2472d382aafbSBarry Smith M*/ 2473d382aafbSBarry Smith 2474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 248027710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24815f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2482d382aafbSBarry Smith 24836a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24846a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24856a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2487ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 248822ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2490f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 249160e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2492d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 24966c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 249717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 249817d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25005569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 250217df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 250439f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2506745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 250739f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 25116c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 25126c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2513e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2514ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2515ce605777SToby Isaac 25164d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2517676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2518676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2519676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 25204d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2521676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2522676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2523676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2524676f2a66SJacob Faibussowitsch 2525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2527d382aafbSBarry Smith 252876bdecfbSBarry Smith /*J 2529d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2530d382aafbSBarry Smith 2531d382aafbSBarry Smith Level: beginner 2532d382aafbSBarry Smith 2533e28ce29aSPatrick Sanan Notes: 2534e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 253525ccb61fSToby Isaac with the option --download-sprng or --download-random123 2536d382aafbSBarry Smith 25378f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 253876bdecfbSBarry Smith J*/ 253919fd82e9SBarry Smith typedef const char* PetscRandomType; 2540d382aafbSBarry Smith #define PETSCRAND "rand" 2541d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2542d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2543c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 254425ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2545808ba619SStefano Zampini #define PETSCCURAND "curand" 2546d382aafbSBarry Smith 2547d382aafbSBarry Smith /* Logging support */ 2548014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2549d382aafbSBarry Smith 2550607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2551d382aafbSBarry Smith 2552d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2553140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2554d382aafbSBarry Smith 2555bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 255619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 255819fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2559fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2561d382aafbSBarry Smith 2562014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2563014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2565808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2566808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2571014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2573d382aafbSBarry Smith 2574014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 258197540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 25828a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 258397540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2584d382aafbSBarry Smith 258530815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 258630815ce0SLisandro Dalcin 25879860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 25889860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2589f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2590f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2598c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2599e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2600c891a504SStefano Zampini #endif 2601d382aafbSBarry Smith 2602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2605d382aafbSBarry Smith 2606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 26122a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2613d382aafbSBarry Smith 2614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2619cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2620cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2621d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2622d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2623d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2624d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 26256afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 26266afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26276afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26286afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26296afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2630d382aafbSBarry Smith 26316145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26326145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26336145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26346145cd65SJed Brown 2635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2636d382aafbSBarry Smith 2637ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2638ce94432eSBarry Smith 263945487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 264045487dadSJed Brown 2641d382aafbSBarry Smith struct _n_PetscSubcomm { 2642d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2643d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2644306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 264545487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 264645487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2647708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 264845487dadSJed Brown PetscSubcommType type; 2649e5acf8a4SHong Zhang char *subcommprefix; 2650d382aafbSBarry Smith }; 2651d382aafbSBarry Smith 2652c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2653306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 265436be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2655014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2656014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 265965d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2660053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2661f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2662e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2663a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2664a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2665a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2666d382aafbSBarry Smith 26679962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 26689962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 26699962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 26709962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 26719962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 26729962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 26739962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 26749962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 26759962606eSBarry Smith 26765e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 26775f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 26785f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26795f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26805f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 26815e71baefSBarry Smith 2682a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2683a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2684a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2685a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2686a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2687a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2688a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2689a32e93adSJunchao Zhang 269013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 26910f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 269213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2693137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2694137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2695137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 269613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 269713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 26980f453b92SJed Brown 26995e71baefSBarry Smith 2700471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2701471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2702471ecdacSJed Brown * possible. */ 27036a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2704d382aafbSBarry Smith 27059de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27069de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27079de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27089de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27099de0f6ecSBarry Smith 2710ace2fbaeSBarry Smith #include <stdarg.h> 2711ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2712ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2713ace2fbaeSBarry Smith 2714268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2715fbfcfee5SBarry Smith 27161f817a21SBarry Smith /*@C 27171f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 27181f817a21SBarry Smith 27191f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 27201f817a21SBarry Smith 27211f817a21SBarry Smith Input Parameters: 27221f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 27231f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 27241f817a21SBarry Smith 2725850545d0SSatish Balay Level: intermediate 2726850545d0SSatish Balay 2727f5f57ec0SBarry Smith Not available from Fortran 2728f5f57ec0SBarry Smith 27291f817a21SBarry Smith Options Database: 2730063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27311f817a21SBarry Smith @*/ 2732dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2733dff31646SBarry Smith { 2734dff31646SBarry Smith size_t len; 2735dff31646SBarry Smith char *vstring; 2736dff31646SBarry Smith PetscErrorCode ierr; 2737dff31646SBarry Smith 27381f817a21SBarry Smith PetscFunctionBegin; 27398d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2740dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 274135005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2742580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2743dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27441f817a21SBarry Smith PetscFunctionReturn(0); 2745dff31646SBarry Smith } 2746dff31646SBarry Smith 2747b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2748fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2749fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2750f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2751fe278a28SBarry Smith 2752f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2753f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2754b967cddfSBarry Smith 27559f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27569f4d3c52SBarry Smith 275704102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2758763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2759dff31646SBarry Smith 276068e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27615dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2762d382aafbSBarry Smith 2763b2566f29SBarry Smith 2764b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2765b2566f29SBarry Smith /* 2766b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2767b2566f29SBarry Smith */ 27688f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 276977a5e07dSBarry Smith 277077a5e07dSBarry Smith /*MC 277177a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 277277a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 277377a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 277477a5e07dSBarry Smith 2775d083f849SBarry Smith Collective 277677a5e07dSBarry Smith 277777a5e07dSBarry Smith Synopsis: 277877a5e07dSBarry Smith #include <petscsys.h> 277977a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 278077a5e07dSBarry Smith 278177a5e07dSBarry Smith Input Parameters: 278277a5e07dSBarry Smith + indata - pointer to the input data to be reduced 278377a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 278477a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 278577a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 278677a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 278777a5e07dSBarry Smith 278877a5e07dSBarry Smith Output Parameter: 278977a5e07dSBarry Smith . outdata - the reduced values 279077a5e07dSBarry Smith 2791e28ce29aSPatrick Sanan Notes: 2792e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 279377a5e07dSBarry Smith 279477a5e07dSBarry Smith Level: developer 279577a5e07dSBarry Smith 279677a5e07dSBarry Smith .seealso: MPI_Allreduce() 279777a5e07dSBarry Smith M*/ 2798fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2799b2566f29SBarry Smith #else 2800b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2801b2566f29SBarry Smith #endif 2802b2566f29SBarry Smith 2803b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 28048198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 28058198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 28062f065d89SBarry Smith #endif 28078198064fSBarry Smith 280812801b39SBarry Smith /* 280960fbe2beSVaclav Hapla List of external packages and queries on it 281060fbe2beSVaclav Hapla */ 281160fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 281260fbe2beSVaclav Hapla 2813d382aafbSBarry Smith #endif 2814