1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith # endif 25216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith # define _BSD_SOURCE 2773fca5a0SBarry Smith # endif 2807f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay # define _DEFAULT_SOURCE 3007f00807SSatish Balay # endif 31ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar # define _GNU_SOURCE 33ea0fecefSShri Abhyankar # endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36df4397b0SStefano Zampini #include <petscsystypes.h> 37df4397b0SStefano Zampini 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 402c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 41d382aafbSBarry Smith */ 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48c5e4d11fSDmitry Karpeev /* ========================================================================== */ 49c5e4d11fSDmitry Karpeev /* 50c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 511cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 521cc8b206SBarry Smith file within an extern "C". 53c5e4d11fSDmitry Karpeev */ 54c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 55c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 56c5e4d11fSDmitry Karpeev #endif 57c5e4d11fSDmitry Karpeev 58ed938b00SJed Brown #if defined(__cplusplus) 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 60ed938b00SJed Brown #else 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 62ed938b00SJed Brown #endif 63ed938b00SJed Brown 64ed938b00SJed Brown #if defined(__cplusplus) 6558c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 66ed938b00SJed Brown #else 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 7058c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7158c433abSLisandro Dalcin 72ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 73014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 74014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7726703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7826703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7926703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 81014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 82014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 84d382aafbSBarry Smith #else 85014dd563SJed Brown # define PETSC_DLLEXPORT 86014dd563SJed Brown # define PETSC_DLLIMPORT 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 88014dd563SJed Brown #endif 89014dd563SJed Brown 90014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 91014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 92014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 94014dd563SJed Brown #endif 95014dd563SJed Brown 961cc8b206SBarry Smith /* 971cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 981cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 991cc8b206SBarry Smith used from C and are always visible in the shared libraries 1001cc8b206SBarry Smith */ 1012c280183SJed Brown #if defined(__cplusplus) 102014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 103638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10421f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 105014dd563SJed Brown #else 106014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1086258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 109d382aafbSBarry Smith #endif 11027710113SBarry Smith 1112c8e378dSBarry Smith #include <petscversion.h> 112a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 113d382aafbSBarry Smith 114d382aafbSBarry Smith /* ========================================================================== */ 115d382aafbSBarry Smith 116d382aafbSBarry Smith /* 117d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 118d382aafbSBarry Smith 119d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 120d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 121d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 122d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 123d382aafbSBarry Smith mpicxx.h directly in their code 124d382aafbSBarry Smith */ 125fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 126d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 127fa9e63e2SJed Brown #endif 128fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 129d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 130fa9e63e2SJed Brown #endif 131e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 132e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 133e771154cSJed Brown #else 1342c8e378dSBarry Smith # include <mpi.h> 135e771154cSJed Brown #endif 13665013866SBarry Smith 137d382aafbSBarry Smith /* 138a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 139a7886beaSBarry Smith This usually happens because 140a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 141a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 142a7886beaSBarry Smith */ 143a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 144a7886beaSBarry Smith # if !defined(__MPIUNI_H) 145a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 146a7886beaSBarry Smith # endif 14741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 14841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 14941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 15041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 15141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 15241f4af4cSSatish Balay # endif 15341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 15441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 15541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 15641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 15741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 15841f4af4cSSatish Balay # endif 159a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 16041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 161a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 162ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 163a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 164a7886beaSBarry Smith # endif 165a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 166a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 167a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 168ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 169c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 170a7886beaSBarry Smith # endif 17141f4af4cSSatish Balay #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) 17241f4af4cSSatish Balay # error "PETSc was configured with undetermined MPI - but now appears to be compiling using either of OpenMPI or a MPICH variant" 173a7886beaSBarry Smith #endif 174a7886beaSBarry Smith 175a7886beaSBarry Smith /* 1762981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 177d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 178d382aafbSBarry Smith */ 179d382aafbSBarry Smith #include <stdio.h> 180d382aafbSBarry Smith 181d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 182d382aafbSBarry Smith #if !defined(MPIAPI) 183d382aafbSBarry Smith #define MPIAPI 184d382aafbSBarry Smith #endif 185d382aafbSBarry Smith 1861cc8b206SBarry Smith /* 1871cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1881cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1891cc8b206SBarry Smith does not match the actual type of the argument being passed in 1901cc8b206SBarry Smith */ 191c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 192894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 193894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1948ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1958ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 196894dd566SJed Brown # endif 197894dd566SJed Brown #endif 198894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 199894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2008ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2018ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 202894dd566SJed Brown #endif 203b3506946SBarry Smith 2045a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 205df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 206e28ce29aSPatrick Sanan 207e28ce29aSPatrick Sanan /*MC 208e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 209e28ce29aSPatrick Sanan 210e28ce29aSPatrick Sanan Notes: 211e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 212e28ce29aSPatrick Sanan 213e28ce29aSPatrick Sanan Level: beginner 214e28ce29aSPatrick Sanan 215e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 216e28ce29aSPatrick Sanan M*/ 217e28ce29aSPatrick Sanan 21837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 219bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 220a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 221fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 222bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 223a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 224f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 225bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 226a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 227236ed0a3SSatish Balay #else 228bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 229236ed0a3SSatish Balay #endif 230b7b8f77aSBarry Smith 2317cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 232b7b8f77aSBarry Smith 233d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 234bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 235a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 236d382aafbSBarry Smith #else 237d382aafbSBarry Smith # define MPIU_INT MPI_INT 238a05e1a72SSatish Balay # define PetscInt_FMT "d" 239d382aafbSBarry Smith #endif 240d382aafbSBarry Smith 241503cfb0cSBarry Smith /* 242503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 243503cfb0cSBarry Smith */ 244e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 245d382aafbSBarry Smith 246d382aafbSBarry Smith /* 247d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 248d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 249d382aafbSBarry Smith */ 250014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 251d382aafbSBarry Smith 252d382aafbSBarry Smith /* 253d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 254d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 255d382aafbSBarry Smith */ 256014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 257d382aafbSBarry Smith 258d382aafbSBarry Smith /*MC 259d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 260d382aafbSBarry Smith 261d382aafbSBarry Smith Synopsis: 262aaa7dc30SBarry Smith #include <petscsys.h> 263ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 264d382aafbSBarry Smith 265eca87e8dSBarry Smith Not Collective 266eca87e8dSBarry Smith 267d382aafbSBarry Smith Input Parameters: 268d382aafbSBarry Smith . cond - condition or expression 269d382aafbSBarry Smith 270e28ce29aSPatrick Sanan Notes: 271e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 272d382aafbSBarry Smith branch is unlikely. 273d382aafbSBarry Smith 274d382aafbSBarry Smith Level: advanced 275d382aafbSBarry Smith 276d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 277d382aafbSBarry Smith M*/ 278d382aafbSBarry Smith 279d382aafbSBarry Smith /*MC 280d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 281d382aafbSBarry Smith 282d382aafbSBarry Smith Synopsis: 283aaa7dc30SBarry Smith #include <petscsys.h> 28423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 285d382aafbSBarry Smith 286eca87e8dSBarry Smith Not Collective 287eca87e8dSBarry Smith 288d382aafbSBarry Smith Input Parameters: 289d382aafbSBarry Smith . cond - condition or expression 290d382aafbSBarry Smith 291e28ce29aSPatrick Sanan Notes: 292e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 293d382aafbSBarry Smith branch is likely. 294d382aafbSBarry Smith 295d382aafbSBarry Smith Level: advanced 296d382aafbSBarry Smith 297d382aafbSBarry Smith .seealso: PetscUnlikely() 298d382aafbSBarry Smith M*/ 299d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 300d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 301d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 302d382aafbSBarry Smith #else 303cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 304cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 305d382aafbSBarry Smith #endif 306d382aafbSBarry Smith 307d382aafbSBarry Smith /* 308d382aafbSBarry Smith Declare extern C stuff after including external header files 309d382aafbSBarry Smith */ 310d382aafbSBarry Smith 3116a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 31270b3c8c7SBarry Smith 3138b49ba18SBarry Smith /* 314390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 3158b49ba18SBarry Smith */ 3168b49ba18SBarry Smith #include <petscmath.h> 3178b49ba18SBarry Smith 3186a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 319d382aafbSBarry Smith 320d382aafbSBarry Smith /*MC 3210298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 322d382aafbSBarry Smith 323d382aafbSBarry Smith Level: beginner 324d382aafbSBarry Smith 325e28ce29aSPatrick Sanan Note: 326e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 327d382aafbSBarry Smith some default 328d382aafbSBarry Smith 329e28ce29aSPatrick Sanan Fortran Notes: 330e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 331d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 332d382aafbSBarry Smith 333e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 334d382aafbSBarry Smith 335d382aafbSBarry Smith M*/ 3360298fd71SBarry Smith #define PETSC_IGNORE NULL 337d382aafbSBarry Smith 338c528d872SBarry Smith /* This is deprecated */ 339c528d872SBarry Smith #define PETSC_NULL NULL 340c528d872SBarry Smith 341d382aafbSBarry Smith /*MC 342557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 343557d4da8SBarry Smith where you wish PETSc to use the default. 344557d4da8SBarry Smith 345557d4da8SBarry Smith Level: beginner 346557d4da8SBarry Smith 347e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 348557d4da8SBarry Smith 349557d4da8SBarry Smith M*/ 350557d4da8SBarry Smith #define PETSC_DECIDE -1 351557d4da8SBarry Smith 352557d4da8SBarry Smith /*MC 353d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 354d382aafbSBarry Smith where you wish PETSc to compute the required value. 355d382aafbSBarry Smith 356d382aafbSBarry Smith Level: beginner 357d382aafbSBarry Smith 358e28ce29aSPatrick Sanan Developer Note: 359e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 360557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 361557d4da8SBarry Smith 3620298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 363d382aafbSBarry Smith 364d382aafbSBarry Smith M*/ 365d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 366d382aafbSBarry Smith 367d382aafbSBarry Smith /*MC 368557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 369557d4da8SBarry Smith where you wish PETSc to use the default. 370557d4da8SBarry Smith 371557d4da8SBarry Smith Level: beginner 372557d4da8SBarry Smith 373e28ce29aSPatrick Sanan Fortran Notes: 374e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 375557d4da8SBarry Smith 3760298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 377557d4da8SBarry Smith 378557d4da8SBarry Smith M*/ 379557d4da8SBarry Smith #define PETSC_DEFAULT -2 380557d4da8SBarry Smith 381557d4da8SBarry Smith /*MC 382d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 383ea8fe74dSBarry Smith all the processes that PETSc knows about. 384d382aafbSBarry Smith 385d382aafbSBarry Smith Level: beginner 386d382aafbSBarry Smith 387e28ce29aSPatrick Sanan Notes: 388e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 389d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 390d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 391a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 392a990b902SBarry Smith 393a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 394a990b902SBarry Smith is called because it may not have a valid value yet. 395d382aafbSBarry Smith 396d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 397d382aafbSBarry Smith 398d382aafbSBarry Smith M*/ 399014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 400d382aafbSBarry Smith 401d382aafbSBarry Smith /*MC 402503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 403d382aafbSBarry Smith 404d382aafbSBarry Smith Level: beginner 405d382aafbSBarry Smith 406e28ce29aSPatrick Sanan Notes: 407e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 408a990b902SBarry Smith 409d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 410d382aafbSBarry Smith 411d382aafbSBarry Smith M*/ 412d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 413d382aafbSBarry Smith 414d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 415014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 416014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 4174cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 41882f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 419d382aafbSBarry Smith 420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 423d382aafbSBarry Smith 424d382aafbSBarry Smith /*MC 42595dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 426d382aafbSBarry Smith 427eca87e8dSBarry Smith Synopsis: 428aaa7dc30SBarry Smith #include <petscsys.h> 429eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 430eca87e8dSBarry Smith 431eca87e8dSBarry Smith Not Collective 432eca87e8dSBarry Smith 433d382aafbSBarry Smith Input Parameter: 434d382aafbSBarry Smith . m - number of bytes to allocate 435d382aafbSBarry Smith 436d382aafbSBarry Smith Output Parameter: 437d382aafbSBarry Smith . result - memory allocated 438d382aafbSBarry Smith 439d382aafbSBarry Smith Level: beginner 440d382aafbSBarry Smith 44149d7da52SJed Brown Notes: 44249d7da52SJed Brown Memory is always allocated at least double aligned 443d382aafbSBarry Smith 44449d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 445d382aafbSBarry Smith 446d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 447d382aafbSBarry Smith 448d382aafbSBarry Smith M*/ 44949d7da52SJed Brown #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 450d382aafbSBarry Smith 451d382aafbSBarry Smith /*MC 4523221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 4533221ece2SMatthew G. Knepley 4543221ece2SMatthew G. Knepley Synopsis: 4553221ece2SMatthew G. Knepley #include <petscsys.h> 4563221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 4573221ece2SMatthew G. Knepley 4583221ece2SMatthew G. Knepley Not Collective 4593221ece2SMatthew G. Knepley 4603221ece2SMatthew G. Knepley Input Parameters: 4613221ece2SMatthew G. Knepley + m - number of bytes to allocate 4623221ece2SMatthew G. Knepley - result - initial memory allocated 4633221ece2SMatthew G. Knepley 4643221ece2SMatthew G. Knepley Output Parameter: 4653221ece2SMatthew G. Knepley . result - new memory allocated 4663221ece2SMatthew G. Knepley 4673221ece2SMatthew G. Knepley Level: developer 4683221ece2SMatthew G. Knepley 4693221ece2SMatthew G. Knepley Notes: 4703221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 4713221ece2SMatthew G. Knepley 4723221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 4733221ece2SMatthew G. Knepley 4743221ece2SMatthew G. Knepley M*/ 4753221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 4763221ece2SMatthew G. Knepley 4773221ece2SMatthew G. Knepley /*MC 478503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 479d382aafbSBarry Smith 480d382aafbSBarry Smith Synopsis: 481aaa7dc30SBarry Smith #include <petscsys.h> 482d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 483d382aafbSBarry Smith 484eca87e8dSBarry Smith Not Collective 485eca87e8dSBarry Smith 486eca87e8dSBarry Smith Input Parameters: 487eca87e8dSBarry Smith . addr - address to align (any pointer type) 488eca87e8dSBarry Smith 489d382aafbSBarry Smith Level: developer 490d382aafbSBarry Smith 491d382aafbSBarry Smith .seealso: PetscMallocAlign() 492d382aafbSBarry Smith 493d382aafbSBarry Smith M*/ 494d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 495d382aafbSBarry Smith 496d382aafbSBarry Smith /*MC 497785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 498d382aafbSBarry Smith 499eca87e8dSBarry Smith Synopsis: 500aaa7dc30SBarry Smith #include <petscsys.h> 501785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 502785e854fSJed Brown 503785e854fSJed Brown Not Collective 504785e854fSJed Brown 505785e854fSJed Brown Input Parameter: 506390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 507785e854fSJed Brown 508785e854fSJed Brown Output Parameter: 509785e854fSJed Brown . r1 - memory allocated in first chunk 510785e854fSJed Brown 511e28ce29aSPatrick Sanan Note: 512e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 513390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 514390e1bf2SBarry Smith $ PetscInt *id; 515390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 516390e1bf2SBarry Smith not 517390e1bf2SBarry Smith $ PetscInt *id; 518390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 519390e1bf2SBarry Smith 520390e1bf2SBarry Smith Does not zero the memory allocatd, used PetscCalloc1() to obtain memory that has been zeroed. 521390e1bf2SBarry Smith 522390e1bf2SBarry Smith Level: beginner 523785e854fSJed Brown 5241795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 525785e854fSJed Brown 526785e854fSJed Brown M*/ 5272553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 528785e854fSJed Brown 529785e854fSJed Brown /*MC 5301795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 5311795a4d1SJed Brown 5321795a4d1SJed Brown Synopsis: 533aaa7dc30SBarry Smith #include <petscsys.h> 5341795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 5351795a4d1SJed Brown 5361795a4d1SJed Brown Not Collective 5371795a4d1SJed Brown 5381795a4d1SJed Brown Input Parameter: 5391795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5401795a4d1SJed Brown 5411795a4d1SJed Brown Output Parameter: 5421795a4d1SJed Brown . r1 - memory allocated in first chunk 5431795a4d1SJed Brown 544e28ce29aSPatrick Sanan Notes: 545e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 546390e1bf2SBarry Smith 547390e1bf2SBarry Smith Level: beginner 5481795a4d1SJed Brown 5491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 5501795a4d1SJed Brown 5511795a4d1SJed Brown M*/ 5522553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 5531795a4d1SJed Brown 5541795a4d1SJed Brown /*MC 555dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 556d382aafbSBarry Smith 557eca87e8dSBarry Smith Synopsis: 558aaa7dc30SBarry Smith #include <petscsys.h> 559dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 560eca87e8dSBarry Smith 561eca87e8dSBarry Smith Not Collective 562eca87e8dSBarry Smith 563d382aafbSBarry Smith Input Parameter: 564d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 565dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 566d382aafbSBarry Smith 567d382aafbSBarry Smith Output Parameter: 568d382aafbSBarry Smith + r1 - memory allocated in first chunk 569d382aafbSBarry Smith - r2 - memory allocated in second chunk 570d382aafbSBarry Smith 571d382aafbSBarry Smith Level: developer 572d382aafbSBarry Smith 5731795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 574d382aafbSBarry Smith 575d382aafbSBarry Smith M*/ 5762553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 577d382aafbSBarry Smith 578d382aafbSBarry Smith /*MC 5791795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 580d382aafbSBarry Smith 581eca87e8dSBarry Smith Synopsis: 582aaa7dc30SBarry Smith #include <petscsys.h> 5831795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 584eca87e8dSBarry Smith 585eca87e8dSBarry Smith Not Collective 586eca87e8dSBarry Smith 587d382aafbSBarry Smith Input Parameter: 588d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5891795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5901795a4d1SJed Brown 5911795a4d1SJed Brown Output Parameter: 5921795a4d1SJed Brown + r1 - memory allocated in first chunk 5931795a4d1SJed Brown - r2 - memory allocated in second chunk 5941795a4d1SJed Brown 5951795a4d1SJed Brown Level: developer 5961795a4d1SJed Brown 5971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 5981795a4d1SJed Brown 5991795a4d1SJed Brown M*/ 6002553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 6011795a4d1SJed Brown 6021795a4d1SJed Brown /*MC 603dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 604d382aafbSBarry Smith 605d382aafbSBarry Smith Synopsis: 606aaa7dc30SBarry Smith #include <petscsys.h> 607dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 608d382aafbSBarry Smith 609d382aafbSBarry Smith Not Collective 610d382aafbSBarry Smith 611d382aafbSBarry Smith Input Parameter: 612d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 613d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 614dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 615d382aafbSBarry Smith 616d382aafbSBarry Smith Output Parameter: 617d382aafbSBarry Smith + r1 - memory allocated in first chunk 618d382aafbSBarry Smith . r2 - memory allocated in second chunk 619d382aafbSBarry Smith - r3 - memory allocated in third chunk 620d382aafbSBarry Smith 621d382aafbSBarry Smith Level: developer 622d382aafbSBarry Smith 6231795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 624d382aafbSBarry Smith 625d382aafbSBarry Smith M*/ 6262553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 627d382aafbSBarry Smith 628d382aafbSBarry Smith /*MC 6291795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 630d382aafbSBarry Smith 631eca87e8dSBarry Smith Synopsis: 632aaa7dc30SBarry Smith #include <petscsys.h> 6331795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 634eca87e8dSBarry Smith 635eca87e8dSBarry Smith Not Collective 636eca87e8dSBarry Smith 637d382aafbSBarry Smith Input Parameter: 638d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 639d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 6401795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 6411795a4d1SJed Brown 6421795a4d1SJed Brown Output Parameter: 6431795a4d1SJed Brown + r1 - memory allocated in first chunk 6441795a4d1SJed Brown . r2 - memory allocated in second chunk 6451795a4d1SJed Brown - r3 - memory allocated in third chunk 6461795a4d1SJed Brown 6471795a4d1SJed Brown Level: developer 6481795a4d1SJed Brown 6491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 6501795a4d1SJed Brown 6511795a4d1SJed Brown M*/ 6522553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 6531795a4d1SJed Brown 6541795a4d1SJed Brown /*MC 655dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 656d382aafbSBarry Smith 657d382aafbSBarry Smith Synopsis: 658aaa7dc30SBarry Smith #include <petscsys.h> 659dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 660d382aafbSBarry Smith 661d382aafbSBarry Smith Not Collective 662d382aafbSBarry Smith 663d382aafbSBarry Smith Input Parameter: 664d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 665d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 666d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 667dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 668d382aafbSBarry Smith 669d382aafbSBarry Smith Output Parameter: 670d382aafbSBarry Smith + r1 - memory allocated in first chunk 671d382aafbSBarry Smith . r2 - memory allocated in second chunk 672d382aafbSBarry Smith . r3 - memory allocated in third chunk 673d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 674d382aafbSBarry Smith 675d382aafbSBarry Smith Level: developer 676d382aafbSBarry Smith 6771795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 678d382aafbSBarry Smith 679d382aafbSBarry Smith M*/ 6802553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 681d382aafbSBarry Smith 682d382aafbSBarry Smith /*MC 6831795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 684d382aafbSBarry Smith 685eca87e8dSBarry Smith Synopsis: 686aaa7dc30SBarry Smith #include <petscsys.h> 6871795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 688eca87e8dSBarry Smith 689eca87e8dSBarry Smith Not Collective 690eca87e8dSBarry Smith 691e28ce29aSPatrick Sanan Input Parameters: 692d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 693d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 694d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6951795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6961795a4d1SJed Brown 697e28ce29aSPatrick Sanan Output Parameters: 6981795a4d1SJed Brown + r1 - memory allocated in first chunk 6991795a4d1SJed Brown . r2 - memory allocated in second chunk 7001795a4d1SJed Brown . r3 - memory allocated in third chunk 7011795a4d1SJed Brown - r4 - memory allocated in fourth chunk 7021795a4d1SJed Brown 7031795a4d1SJed Brown Level: developer 7041795a4d1SJed Brown 7051795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 7061795a4d1SJed Brown 7071795a4d1SJed Brown M*/ 7082553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 7091795a4d1SJed Brown 7101795a4d1SJed Brown /*MC 711dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 712d382aafbSBarry Smith 713d382aafbSBarry Smith Synopsis: 714aaa7dc30SBarry Smith #include <petscsys.h> 715dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 716d382aafbSBarry Smith 717d382aafbSBarry Smith Not Collective 718d382aafbSBarry Smith 719e28ce29aSPatrick Sanan Input Parameters: 720d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 721d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 722d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 723d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 724dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 725d382aafbSBarry Smith 726e28ce29aSPatrick Sanan Output Parameters: 727d382aafbSBarry Smith + r1 - memory allocated in first chunk 728d382aafbSBarry Smith . r2 - memory allocated in second chunk 729d382aafbSBarry Smith . r3 - memory allocated in third chunk 730d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 731d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 732d382aafbSBarry Smith 733d382aafbSBarry Smith Level: developer 734d382aafbSBarry Smith 7351795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 736d382aafbSBarry Smith 737d382aafbSBarry Smith M*/ 7382553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 739d382aafbSBarry Smith 740d382aafbSBarry Smith /*MC 7411795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 742d382aafbSBarry Smith 743eca87e8dSBarry Smith Synopsis: 744aaa7dc30SBarry Smith #include <petscsys.h> 7451795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 746eca87e8dSBarry Smith 747eca87e8dSBarry Smith Not Collective 748eca87e8dSBarry Smith 749e28ce29aSPatrick Sanan Input Parameters: 750d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 751d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 752d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 753d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7541795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7551795a4d1SJed Brown 756e28ce29aSPatrick Sanan Output Parameters: 7571795a4d1SJed Brown + r1 - memory allocated in first chunk 7581795a4d1SJed Brown . r2 - memory allocated in second chunk 7591795a4d1SJed Brown . r3 - memory allocated in third chunk 7601795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7611795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7621795a4d1SJed Brown 7631795a4d1SJed Brown Level: developer 7641795a4d1SJed Brown 7651795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 7661795a4d1SJed Brown 7671795a4d1SJed Brown M*/ 7682553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 769d382aafbSBarry Smith 770d382aafbSBarry Smith /*MC 771dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 772d382aafbSBarry Smith 773d382aafbSBarry Smith Synopsis: 774aaa7dc30SBarry Smith #include <petscsys.h> 775dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 776d382aafbSBarry Smith 777d382aafbSBarry Smith Not Collective 778d382aafbSBarry Smith 779e28ce29aSPatrick Sanan Input Parameters: 780d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 781d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 782d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 783d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 784d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 785dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 786d382aafbSBarry Smith 787e28ce29aSPatrick Sanan Output Parameteasr: 788d382aafbSBarry Smith + r1 - memory allocated in first chunk 789d382aafbSBarry Smith . r2 - memory allocated in second chunk 790d382aafbSBarry Smith . r3 - memory allocated in third chunk 791d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 792d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 793d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 794d382aafbSBarry Smith 795d382aafbSBarry Smith Level: developer 796d382aafbSBarry Smith 7971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 798d382aafbSBarry Smith 799d382aafbSBarry Smith M*/ 8002553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 801d382aafbSBarry Smith 802d382aafbSBarry Smith /*MC 8031795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 804d382aafbSBarry Smith 805eca87e8dSBarry Smith Synopsis: 806aaa7dc30SBarry Smith #include <petscsys.h> 8071795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 808eca87e8dSBarry Smith 809eca87e8dSBarry Smith Not Collective 810eca87e8dSBarry Smith 811e28ce29aSPatrick Sanan Input Parameters: 812d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 813d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 814d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 815d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 816d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 8171795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 8181795a4d1SJed Brown 819e28ce29aSPatrick Sanan Output Parameters: 8201795a4d1SJed Brown + r1 - memory allocated in first chunk 8211795a4d1SJed Brown . r2 - memory allocated in second chunk 8221795a4d1SJed Brown . r3 - memory allocated in third chunk 8231795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8241795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8251795a4d1SJed Brown - r6 - memory allocated in sixth chunk 8261795a4d1SJed Brown 8271795a4d1SJed Brown Level: developer 8281795a4d1SJed Brown 8291795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 8301795a4d1SJed Brown 8311795a4d1SJed Brown M*/ 8322553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 8331795a4d1SJed Brown 8341795a4d1SJed Brown /*MC 835dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 836d382aafbSBarry Smith 837d382aafbSBarry Smith Synopsis: 838aaa7dc30SBarry Smith #include <petscsys.h> 839dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 840d382aafbSBarry Smith 841d382aafbSBarry Smith Not Collective 842d382aafbSBarry Smith 843e28ce29aSPatrick Sanan Input Parameters: 844d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 845d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 846d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 847d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 848d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 849d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 850dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 851d382aafbSBarry Smith 852e28ce29aSPatrick Sanan Output Parameters: 853d382aafbSBarry Smith + r1 - memory allocated in first chunk 854d382aafbSBarry Smith . r2 - memory allocated in second chunk 855d382aafbSBarry Smith . r3 - memory allocated in third chunk 856d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 857d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 858d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 859eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 860d382aafbSBarry Smith 861d382aafbSBarry Smith Level: developer 862d382aafbSBarry Smith 8631795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 864d382aafbSBarry Smith 865d382aafbSBarry Smith M*/ 8662553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 867d382aafbSBarry Smith 868d382aafbSBarry Smith /*MC 8691795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 8701795a4d1SJed Brown 8711795a4d1SJed Brown Synopsis: 872aaa7dc30SBarry Smith #include <petscsys.h> 8731795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8741795a4d1SJed Brown 8751795a4d1SJed Brown Not Collective 8761795a4d1SJed Brown 877e28ce29aSPatrick Sanan Input Parameters: 8781795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8791795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8801795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8811795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8821795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8831795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8841795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8851795a4d1SJed Brown 886e28ce29aSPatrick Sanan Output Parameters: 8871795a4d1SJed Brown + r1 - memory allocated in first chunk 8881795a4d1SJed Brown . r2 - memory allocated in second chunk 8891795a4d1SJed Brown . r3 - memory allocated in third chunk 8901795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8911795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8921795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8931795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8941795a4d1SJed Brown 8951795a4d1SJed Brown Level: developer 8961795a4d1SJed Brown 8971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 8981795a4d1SJed Brown 8991795a4d1SJed Brown M*/ 9002553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 9011795a4d1SJed Brown 9021795a4d1SJed Brown /*MC 903503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 904d382aafbSBarry Smith 905eca87e8dSBarry Smith Synopsis: 906aaa7dc30SBarry Smith #include <petscsys.h> 907b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 908eca87e8dSBarry Smith 909eca87e8dSBarry Smith Not Collective 910eca87e8dSBarry Smith 911d382aafbSBarry Smith Output Parameter: 912b00a9115SJed Brown . result - memory allocated, sized to match pointer type 913d382aafbSBarry Smith 914d382aafbSBarry Smith Level: beginner 915d382aafbSBarry Smith 916390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 917d382aafbSBarry Smith 918d382aafbSBarry Smith M*/ 919b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 920ad0619ddSBarry Smith 921ad0619ddSBarry Smith /*MC 922b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 923ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 924ad0619ddSBarry Smith 925ad0619ddSBarry Smith Synopsis: 926aaa7dc30SBarry Smith #include <petscsys.h> 927b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 928ad0619ddSBarry Smith 929ad0619ddSBarry Smith Not Collective 930ad0619ddSBarry Smith 931ad0619ddSBarry Smith Input Parameter: 932b00a9115SJed Brown . obj - object memory is logged to 933ad0619ddSBarry Smith 934ad0619ddSBarry Smith Output Parameter: 935b00a9115SJed Brown . result - memory allocated, sized to match pointer type 936ad0619ddSBarry Smith 937ad0619ddSBarry Smith Level: developer 938ad0619ddSBarry Smith 939390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 940ad0619ddSBarry Smith 941ad0619ddSBarry Smith M*/ 942d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 943d382aafbSBarry Smith 944d382aafbSBarry Smith /*MC 945d382aafbSBarry Smith PetscFree - Frees memory 946d382aafbSBarry Smith 947eca87e8dSBarry Smith Synopsis: 948aaa7dc30SBarry Smith #include <petscsys.h> 949eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 950eca87e8dSBarry Smith 951eca87e8dSBarry Smith Not Collective 952eca87e8dSBarry Smith 953d382aafbSBarry Smith Input Parameter: 954390e1bf2SBarry Smith . memory - memory to free (the pointer is ALWAYS set to NULL upon sucess) 955d382aafbSBarry Smith 956d382aafbSBarry Smith Level: beginner 957d382aafbSBarry Smith 95849d7da52SJed Brown Notes: 959390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 960390e1bf2SBarry Smith 96149d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 962d382aafbSBarry Smith 963390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 964d382aafbSBarry Smith 965d382aafbSBarry Smith M*/ 96649d7da52SJed Brown #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0)) 967d382aafbSBarry Smith 968d382aafbSBarry Smith /*MC 969d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 970d382aafbSBarry Smith 971eca87e8dSBarry Smith Synopsis: 972aaa7dc30SBarry Smith #include <petscsys.h> 973eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 974eca87e8dSBarry Smith 975eca87e8dSBarry Smith Not Collective 976eca87e8dSBarry Smith 977e28ce29aSPatrick Sanan Input Parameters: 978d382aafbSBarry Smith + memory1 - memory to free 979d382aafbSBarry Smith - memory2 - 2nd memory to free 980d382aafbSBarry Smith 981d382aafbSBarry Smith Level: developer 982d382aafbSBarry Smith 98395452b02SPatrick Sanan Notes: 98495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 985d382aafbSBarry Smith 986d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 987d382aafbSBarry Smith 988d382aafbSBarry Smith M*/ 989ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 990d382aafbSBarry Smith 991d382aafbSBarry Smith /*MC 992d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 993d382aafbSBarry Smith 994eca87e8dSBarry Smith Synopsis: 995aaa7dc30SBarry Smith #include <petscsys.h> 996eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 997eca87e8dSBarry Smith 998eca87e8dSBarry Smith Not Collective 999eca87e8dSBarry Smith 1000e28ce29aSPatrick Sanan Input Parameters: 1001d382aafbSBarry Smith + memory1 - memory to free 1002d382aafbSBarry Smith . memory2 - 2nd memory to free 1003d382aafbSBarry Smith - memory3 - 3rd memory to free 1004d382aafbSBarry Smith 1005d382aafbSBarry Smith Level: developer 1006d382aafbSBarry Smith 100795452b02SPatrick Sanan Notes: 100895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1009d382aafbSBarry Smith 1010d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1011d382aafbSBarry Smith 1012d382aafbSBarry Smith M*/ 1013ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1014d382aafbSBarry Smith 1015d382aafbSBarry Smith /*MC 1016d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1017d382aafbSBarry Smith 1018eca87e8dSBarry Smith Synopsis: 1019aaa7dc30SBarry Smith #include <petscsys.h> 1020eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1021eca87e8dSBarry Smith 1022eca87e8dSBarry Smith Not Collective 1023eca87e8dSBarry Smith 1024e28ce29aSPatrick Sanan Input Parameters: 1025d382aafbSBarry Smith + m1 - memory to free 1026d382aafbSBarry Smith . m2 - 2nd memory to free 1027d382aafbSBarry Smith . m3 - 3rd memory to free 1028d382aafbSBarry Smith - m4 - 4th memory to free 1029d382aafbSBarry Smith 1030d382aafbSBarry Smith Level: developer 1031d382aafbSBarry Smith 103295452b02SPatrick Sanan Notes: 103395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1034d382aafbSBarry Smith 1035d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1036d382aafbSBarry Smith 1037d382aafbSBarry Smith M*/ 1038ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1039d382aafbSBarry Smith 1040d382aafbSBarry Smith /*MC 1041d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1042d382aafbSBarry Smith 1043eca87e8dSBarry Smith Synopsis: 1044aaa7dc30SBarry Smith #include <petscsys.h> 1045eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1046eca87e8dSBarry Smith 1047eca87e8dSBarry Smith Not Collective 1048eca87e8dSBarry Smith 1049e28ce29aSPatrick Sanan Input Parameters: 1050d382aafbSBarry Smith + m1 - memory to free 1051d382aafbSBarry Smith . m2 - 2nd memory to free 1052d382aafbSBarry Smith . m3 - 3rd memory to free 1053d382aafbSBarry Smith . m4 - 4th memory to free 1054d382aafbSBarry Smith - m5 - 5th memory to free 1055d382aafbSBarry Smith 1056d382aafbSBarry Smith Level: developer 1057d382aafbSBarry Smith 105895452b02SPatrick Sanan Notes: 105995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1060d382aafbSBarry Smith 1061d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1062d382aafbSBarry Smith 1063d382aafbSBarry Smith M*/ 1064ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1065d382aafbSBarry Smith 1066d382aafbSBarry Smith /*MC 1067d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1068d382aafbSBarry Smith 1069eca87e8dSBarry Smith Synopsis: 1070aaa7dc30SBarry Smith #include <petscsys.h> 1071eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1072eca87e8dSBarry Smith 1073eca87e8dSBarry Smith Not Collective 1074eca87e8dSBarry Smith 1075e28ce29aSPatrick Sanan Input Parameters: 1076d382aafbSBarry Smith + m1 - memory to free 1077d382aafbSBarry Smith . m2 - 2nd memory to free 1078d382aafbSBarry Smith . m3 - 3rd memory to free 1079d382aafbSBarry Smith . m4 - 4th memory to free 1080d382aafbSBarry Smith . m5 - 5th memory to free 1081d382aafbSBarry Smith - m6 - 6th memory to free 1082d382aafbSBarry Smith 1083d382aafbSBarry Smith 1084d382aafbSBarry Smith Level: developer 1085d382aafbSBarry Smith 108695452b02SPatrick Sanan Notes: 108795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1088d382aafbSBarry Smith 1089d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1090d382aafbSBarry Smith 1091d382aafbSBarry Smith M*/ 1092ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1093d382aafbSBarry Smith 1094d382aafbSBarry Smith /*MC 1095d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1096d382aafbSBarry Smith 1097eca87e8dSBarry Smith Synopsis: 1098aaa7dc30SBarry Smith #include <petscsys.h> 1099eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1100eca87e8dSBarry Smith 1101eca87e8dSBarry Smith Not Collective 1102eca87e8dSBarry Smith 1103e28ce29aSPatrick Sanan Input Parameters: 1104d382aafbSBarry Smith + m1 - memory to free 1105d382aafbSBarry Smith . m2 - 2nd memory to free 1106d382aafbSBarry Smith . m3 - 3rd memory to free 1107d382aafbSBarry Smith . m4 - 4th memory to free 1108d382aafbSBarry Smith . m5 - 5th memory to free 1109d382aafbSBarry Smith . m6 - 6th memory to free 1110d382aafbSBarry Smith - m7 - 7th memory to free 1111d382aafbSBarry Smith 1112d382aafbSBarry Smith 1113d382aafbSBarry Smith Level: developer 1114d382aafbSBarry Smith 111595452b02SPatrick Sanan Notes: 111695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1117d382aafbSBarry Smith 1118d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1119d382aafbSBarry Smith PetscMalloc7() 1120d382aafbSBarry Smith 1121d382aafbSBarry Smith M*/ 1122ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1123d382aafbSBarry Smith 1124ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1125ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1126efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**); 1127efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 11283221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1129ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 1130efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[])); 1131014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1132d382aafbSBarry Smith 1133d382aafbSBarry Smith /* 1134c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1135c1706be6SHong Zhang */ 1136c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1137c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 1138c1706be6SHong Zhang 1139a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 114036763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1141a5057860SBarry Smith 1142a5057860SBarry Smith /* 114366d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1144d382aafbSBarry Smith */ 1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1149e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1150e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 11520acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*); 1153efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1155574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble); 1156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1157d382aafbSBarry Smith 11586a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 11628e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1163d382aafbSBarry Smith 1164d382aafbSBarry Smith /* 1165d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1166d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1167d382aafbSBarry Smith functionality and/or error checking. 1168d382aafbSBarry Smith */ 1169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1172d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1174014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1175014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1176014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1180a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1181014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11842f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1185014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1188014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 11892c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1190014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1191014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 119247340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 11936fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 11946991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 11956991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1196014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1197d382aafbSBarry Smith 1198573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1199573b0fb4SBarry Smith 1200014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1201014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1202014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 12038e81d068SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1204d382aafbSBarry Smith 1205a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1206a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1207a53986e1SJed Brown 1208d382aafbSBarry Smith /* 1209d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1210d382aafbSBarry Smith */ 1211367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1212570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1213014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 12142414b3c7SJed Brown #else 12152414b3c7SJed Brown #define MPIU_SUM MPI_SUM 12162414b3c7SJed Brown #endif 1217570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1218014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1219014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1220d9822059SBarry Smith #else 1221d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1222d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1223d9822059SBarry Smith #endif 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1225d382aafbSBarry Smith 1226014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1227014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1228eb3f98d2SBarry Smith 122995c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1230d6a4318aSJed Brown 1231639ff905SBarry Smith /* 1232639ff905SBarry Smith Defines PETSc error handling. 1233639ff905SBarry Smith */ 1234639ff905SBarry Smith #include <petscerror.h> 1235d382aafbSBarry Smith 12360700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1237014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1238014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1240d382aafbSBarry Smith 1241d382aafbSBarry Smith /* 1242d382aafbSBarry Smith Routines that get memory usage information from the OS 1243d382aafbSBarry Smith */ 1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1247b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1248d382aafbSBarry Smith 1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1251d382aafbSBarry Smith 1252d382aafbSBarry Smith /* 1253d382aafbSBarry Smith Initialization of PETSc 1254d382aafbSBarry Smith */ 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1265d382aafbSBarry Smith 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1267607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1268d382aafbSBarry Smith 1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1273d382aafbSBarry Smith 1274d382aafbSBarry Smith /* 1275d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12762981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1277d382aafbSBarry Smith */ 1278638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1279638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1280638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1281d382aafbSBarry Smith 1282d382aafbSBarry Smith /* 1283d382aafbSBarry Smith Functions that can act on any PETSc object. 1284d382aafbSBarry Smith */ 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1303bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1304bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 13070eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 13080eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1310d382aafbSBarry Smith 1311665c2dedSJed Brown #include <petscviewertypes.h> 1312639ff905SBarry Smith #include <petscoptions.h> 1313639ff905SBarry Smith 13140633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 13150633abcbSJed Brown 1316639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1317c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1318dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1319639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 13200005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 13210005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1329685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 13324099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1333014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1336d382aafbSBarry Smith 1337e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13387aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1339e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1340e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1341e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1342e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1343e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1344e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1345e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1346e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1347e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 134815681b3cSBarry Smith 1349ec7429eaSBarry Smith #else 13507aab2a10SBarry Smith #define PetscSAWsBlock() 0 1351e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1352e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1353e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1354e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1355e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1356e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1357e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1358e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1359e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 136015681b3cSBarry Smith 1361ec7429eaSBarry Smith #endif 1362b90c6cbeSBarry Smith 136382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 136482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 136582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 13667d5d4d99SBarry Smith 13675fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1368a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 13695fe58b6fSBarry Smith #endif 13707eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1371a64a8e02SBarry Smith 1372140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1373140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1374140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1375140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1376140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1377140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1378d382aafbSBarry Smith 1379d382aafbSBarry Smith /* 1380503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1381d382aafbSBarry Smith link libraries that will be loaded as needed. 1382d382aafbSBarry Smith */ 1383a240a19fSJed Brown 1384a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1385a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1386140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 13871c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 13881c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 1389140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]); 1390140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1391140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1392140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1393d382aafbSBarry Smith 1394014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1402d382aafbSBarry Smith 1403d382aafbSBarry Smith /* 1404d382aafbSBarry Smith Useful utility routines 1405d382aafbSBarry Smith */ 1406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 14126ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 14136ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1414d382aafbSBarry Smith 141564ac3b0dSPatrick Sanan /*MC 1416ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1417503cfb0cSBarry Smith 1418e28ce29aSPatrick Sanan Notes: 1419e28ce29aSPatrick Sanan This is useful in cases like 1420503cfb0cSBarry Smith $ int *a; 1421ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 14221cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 142364ac3b0dSPatrick Sanan 142464ac3b0dSPatrick Sanan Level: beginner 142564ac3b0dSPatrick Sanan 142664ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 142764ac3b0dSPatrick Sanan M*/ 1428d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1429503cfb0cSBarry Smith 1430d382aafbSBarry Smith /*MC 1431d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1432d382aafbSBarry Smith 1433d382aafbSBarry Smith Synopsis: 1434aaa7dc30SBarry Smith #include <petscsys.h> 1435d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1436d382aafbSBarry Smith 1437eca87e8dSBarry Smith Not Collective 1438eca87e8dSBarry Smith 1439d382aafbSBarry Smith Input Parameters: 1440d382aafbSBarry Smith . format - the usual printf() format string 1441d382aafbSBarry Smith 1442d382aafbSBarry Smith Level: developer 1443d382aafbSBarry Smith 1444d382aafbSBarry Smith Fortran Note: 1445d382aafbSBarry Smith This routine is not supported in Fortran. 1446d382aafbSBarry Smith 1447d382aafbSBarry Smith 1448d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1449d382aafbSBarry Smith M*/ 1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1451d382aafbSBarry Smith 1452fcfd50ebSBarry Smith /* 1453fcfd50ebSBarry Smith Defines PETSc profiling. 1454fcfd50ebSBarry Smith */ 14552c8e378dSBarry Smith #include <petsclog.h> 1456fcfd50ebSBarry Smith 1457fcfd50ebSBarry Smith /* 1458fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1459fcfd50ebSBarry Smith */ 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 14671b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1468fcfd50ebSBarry Smith 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1472d382aafbSBarry Smith 1473d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1474d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1475d781fa04SBarry Smith 1476d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1478016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 147974ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1480d382aafbSBarry Smith #endif 1481d382aafbSBarry Smith 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 14840ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1489d382aafbSBarry Smith 1490014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1496b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1497d382aafbSBarry Smith 1498d382aafbSBarry Smith /* 1499d382aafbSBarry Smith For use in debuggers 1500d382aafbSBarry Smith */ 1501014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1502014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1506d382aafbSBarry Smith 1507a663daf8SBarry Smith #include <stddef.h> 1508a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1509d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1510d382aafbSBarry Smith #include <stdlib.h> 1511d382aafbSBarry Smith #endif 15126c7e564aSBarry Smith 15134a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1514d382aafbSBarry Smith #include <xmmintrin.h> 1515d382aafbSBarry Smith #endif 1516d382aafbSBarry Smith 1517857a15f1SBarry Smith /*@C 1518580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1519580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1520580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1521580bdb30SBarry Smith 1522580bdb30SBarry Smith Not Collective 1523580bdb30SBarry Smith 1524580bdb30SBarry Smith Input Parameters: 1525580bdb30SBarry Smith + b - pointer to initial memory space 1526580bdb30SBarry Smith . a - pointer to copy space 1527580bdb30SBarry Smith - n - length (in bytes) of space to copy 1528580bdb30SBarry Smith 1529580bdb30SBarry Smith Level: intermediate 1530580bdb30SBarry Smith 1531580bdb30SBarry Smith Note: 1532857a15f1SBarry Smith PetscArraymove() is preferred 1533580bdb30SBarry Smith This routine is analogous to memmove(). 1534580bdb30SBarry Smith 1535580bdb30SBarry Smith Developers Note: This is inlined for performance 1536580bdb30SBarry Smith 1537580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1538580bdb30SBarry Smith PetscArraymove() 1539580bdb30SBarry Smith @*/ 1540580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1541580bdb30SBarry Smith { 1542580bdb30SBarry Smith PetscFunctionBegin; 1543580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1544580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1545580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1546580bdb30SBarry Smith if (a < b) { 1547580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1548580bdb30SBarry Smith else { 1549580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1550580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1551580bdb30SBarry Smith } 1552580bdb30SBarry Smith } else { 1553580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1554580bdb30SBarry Smith else { 1555580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1556580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1557580bdb30SBarry Smith } 1558580bdb30SBarry Smith } 1559580bdb30SBarry Smith #else 1560580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1561580bdb30SBarry Smith #endif 1562580bdb30SBarry Smith PetscFunctionReturn(0); 1563580bdb30SBarry Smith } 1564580bdb30SBarry Smith 1565d382aafbSBarry Smith /*@C 1566d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1567d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1568d382aafbSBarry Smith PetscMemmove() in that case. 1569d382aafbSBarry Smith 1570d382aafbSBarry Smith Not Collective 1571d382aafbSBarry Smith 1572d382aafbSBarry Smith Input Parameters: 1573d382aafbSBarry Smith + b - pointer to initial memory space 1574d382aafbSBarry Smith - n - length (in bytes) of space to copy 1575d382aafbSBarry Smith 1576d382aafbSBarry Smith Output Parameter: 1577d382aafbSBarry Smith . a - pointer to copy space 1578d382aafbSBarry Smith 1579d382aafbSBarry Smith Level: intermediate 1580d382aafbSBarry Smith 1581d382aafbSBarry Smith Compile Option: 1582d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1583d382aafbSBarry Smith for memory copies on double precision values. 1584d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1585d382aafbSBarry Smith for memory copies on double precision values. 1586d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1587d382aafbSBarry Smith for memory copies on double precision values. 1588d382aafbSBarry Smith 1589d382aafbSBarry Smith Note: 1590580bdb30SBarry Smith Prefer PetscArraycpy() 1591d382aafbSBarry Smith This routine is analogous to memcpy(). 15921fd49c25SBarry Smith Not available from Fortran 15931fd49c25SBarry Smith 1594f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1595f5f57ec0SBarry Smith 1596580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1597d382aafbSBarry Smith 1598d382aafbSBarry Smith @*/ 15997087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1600d382aafbSBarry Smith { 1601d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1602c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1603c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1604a7e36092SMatthew G Knepley PetscFunctionBegin; 1605e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1606e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1607a7e36092SMatthew G Knepley #else 1608d382aafbSBarry Smith PetscFunctionBegin; 1609a7e36092SMatthew G Knepley #endif 1610a47a537aSLisandro Dalcin if (a != b && n > 0) { 1611d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1612e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1613d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1614d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1615d382aafbSBarry Smith #endif 1616d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1617c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1618d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1619d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1620c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1621c5df96a5SBarry Smith PetscErrorCode ierr; 1622c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 16238b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1624d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1625d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1626d382aafbSBarry Smith #else 1627d382aafbSBarry Smith size_t i; 1628d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1629d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1630d382aafbSBarry Smith #endif 1631d382aafbSBarry Smith } else { 1632d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1633d382aafbSBarry Smith } 1634d382aafbSBarry Smith #else 1635d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1636d382aafbSBarry Smith #endif 1637d382aafbSBarry Smith } 1638d382aafbSBarry Smith PetscFunctionReturn(0); 1639d382aafbSBarry Smith } 1640d382aafbSBarry Smith 1641d382aafbSBarry Smith /*@C 1642d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1643d382aafbSBarry Smith 1644d382aafbSBarry Smith Not Collective 1645d382aafbSBarry Smith 1646d382aafbSBarry Smith Input Parameters: 1647d382aafbSBarry Smith + a - pointer to beginning memory location 1648d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1649d382aafbSBarry Smith 1650d382aafbSBarry Smith Level: intermediate 1651d382aafbSBarry Smith 1652d382aafbSBarry Smith Compile Option: 1653d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1654d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1655d382aafbSBarry Smith 16561fd49c25SBarry Smith Not available from Fortran 1657857a15f1SBarry Smith Prefer PetscArrayzero() 16581fd49c25SBarry Smith 1659503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1660503cfb0cSBarry Smith 1661580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1662d382aafbSBarry Smith @*/ 16637087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1664d382aafbSBarry Smith { 1665d382aafbSBarry Smith if (n > 0) { 1666d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1667e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1668d382aafbSBarry Smith #endif 1669d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1670d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1671d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1672d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1673d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1674d382aafbSBarry Smith } else { 1675d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1676d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1677d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1678d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1679d382aafbSBarry Smith } else { 1680d382aafbSBarry Smith #endif 1681d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1682d382aafbSBarry Smith bzero((char *)a,n); 1683d382aafbSBarry Smith #else 1684d382aafbSBarry Smith memset((char*)a,0,n); 1685d382aafbSBarry Smith #endif 1686d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1687d382aafbSBarry Smith } 1688d382aafbSBarry Smith #endif 1689d382aafbSBarry Smith } 1690d382aafbSBarry Smith return 0; 1691d382aafbSBarry Smith } 1692d382aafbSBarry Smith 1693*8f8f2f0dSBarry Smith /*MC 1694580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1695580bdb30SBarry Smith 1696580bdb30SBarry Smith Synopsis: 1697580bdb30SBarry Smith #include <petscsys.h> 1698580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1699580bdb30SBarry Smith 1700580bdb30SBarry Smith Not Collective 1701580bdb30SBarry Smith 1702580bdb30SBarry Smith Input Parameters: 1703580bdb30SBarry Smith + str1 - First array 1704580bdb30SBarry Smith . str2 - Second array 1705580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1706580bdb30SBarry Smith 1707580bdb30SBarry Smith Output Parameters: 1708580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1709580bdb30SBarry Smith 1710580bdb30SBarry Smith Level: intermediate 1711580bdb30SBarry Smith 1712580bdb30SBarry Smith Note: 1713857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1714580bdb30SBarry Smith The arrays must be of the same type 1715580bdb30SBarry Smith 1716580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1717580bdb30SBarry Smith PetscArraymove() 1718580bdb30SBarry Smith M*/ 1719580bdb30SBarry Smith #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(cnt)*sizeof(*(str1)),e)); 1720580bdb30SBarry Smith 1721*8f8f2f0dSBarry Smith /*MC 1722580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1723580bdb30SBarry Smith do not overlap 1724580bdb30SBarry Smith 1725580bdb30SBarry Smith Synopsis: 1726580bdb30SBarry Smith #include <petscsys.h> 1727580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1728580bdb30SBarry Smith 1729580bdb30SBarry Smith Not Collective 1730580bdb30SBarry Smith 1731580bdb30SBarry Smith Input Parameters: 1732580bdb30SBarry Smith + str1 - First array 1733580bdb30SBarry Smith . str2 - Second array 1734580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1735580bdb30SBarry Smith 1736580bdb30SBarry Smith Level: intermediate 1737580bdb30SBarry Smith 1738580bdb30SBarry Smith Note: 1739857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1740580bdb30SBarry Smith The arrays must be of the same type 1741580bdb30SBarry Smith 1742580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1743580bdb30SBarry Smith M*/ 1744580bdb30SBarry Smith #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(cnt)*sizeof(*(str1)))); 1745580bdb30SBarry Smith 1746*8f8f2f0dSBarry Smith /*MC 1747580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1748580bdb30SBarry Smith 1749580bdb30SBarry Smith Synopsis: 1750580bdb30SBarry Smith #include <petscsys.h> 1751580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1752580bdb30SBarry Smith 1753580bdb30SBarry Smith Not Collective 1754580bdb30SBarry Smith 1755580bdb30SBarry Smith Input Parameters: 1756580bdb30SBarry Smith + str1 - First array 1757580bdb30SBarry Smith . str2 - Second array 1758580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1759580bdb30SBarry Smith 1760580bdb30SBarry Smith Level: intermediate 1761580bdb30SBarry Smith 1762580bdb30SBarry Smith Note: 1763857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1764580bdb30SBarry Smith The arrays must be of the same type 1765580bdb30SBarry Smith 1766580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1767580bdb30SBarry Smith M*/ 1768580bdb30SBarry Smith #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(cnt)*sizeof(*(str1)))); 1769580bdb30SBarry Smith 1770*8f8f2f0dSBarry Smith /*MC 1771580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1772580bdb30SBarry Smith 1773580bdb30SBarry Smith Synopsis: 1774580bdb30SBarry Smith #include <petscsys.h> 1775580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1776580bdb30SBarry Smith 1777580bdb30SBarry Smith Not Collective 1778580bdb30SBarry Smith 1779580bdb30SBarry Smith Input Parameters: 1780580bdb30SBarry Smith + str1 - array 1781580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1782580bdb30SBarry Smith 1783580bdb30SBarry Smith Level: intermediate 1784580bdb30SBarry Smith 1785580bdb30SBarry Smith Note: 1786857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1787580bdb30SBarry Smith 1788580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1789580bdb30SBarry Smith M*/ 1790580bdb30SBarry Smith #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(cnt)*sizeof(*(str1))); 1791580bdb30SBarry Smith 1792d382aafbSBarry Smith /*MC 1793d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1794d382aafbSBarry Smith 1795eca87e8dSBarry Smith Synopsis: 1796aaa7dc30SBarry Smith #include <petscsys.h> 1797eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1798eca87e8dSBarry Smith 1799d382aafbSBarry Smith Not Collective 1800d382aafbSBarry Smith 1801d382aafbSBarry Smith Input Parameters: 1802d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1803d382aafbSBarry Smith . n - number of elements to fetch 1804d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 180550d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1806d382aafbSBarry Smith 1807d382aafbSBarry Smith Level: developer 1808d382aafbSBarry Smith 1809d382aafbSBarry Smith Notes: 1810d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1811d382aafbSBarry Smith 181250d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 181350d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 181450d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 181563cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 181663cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 181763cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1818d382aafbSBarry Smith 1819d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1820d382aafbSBarry Smith address). 1821d382aafbSBarry Smith 1822d382aafbSBarry Smith M*/ 1823d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1824d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1825d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1826d382aafbSBarry Smith } while (0) 1827d382aafbSBarry Smith 1828d382aafbSBarry Smith /* 1829d382aafbSBarry Smith Determine if some of the kernel computation routines use 1830d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1831d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1832d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1833e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1834d382aafbSBarry Smith */ 1835d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1836d382aafbSBarry Smith 1837d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1838d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1839d382aafbSBarry Smith #endif 1840d382aafbSBarry Smith 18415a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18425a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1843d382aafbSBarry Smith #endif 1844d382aafbSBarry Smith 1845d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1846d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1847d382aafbSBarry Smith #endif 1848d382aafbSBarry Smith 1849d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1850d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1851d382aafbSBarry Smith #endif 1852d382aafbSBarry Smith 1853d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1854d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1855d382aafbSBarry Smith #endif 1856d382aafbSBarry Smith 1857d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1858d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1859d382aafbSBarry Smith #endif 1860d382aafbSBarry Smith 1861d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1862d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1863d382aafbSBarry Smith #endif 1864d382aafbSBarry Smith 1865d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1866d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1867d382aafbSBarry Smith #endif 1868d382aafbSBarry Smith 1869d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1870d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1871d382aafbSBarry Smith #endif 1872d382aafbSBarry Smith 1873d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1874d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1875d382aafbSBarry Smith #endif 1876d382aafbSBarry Smith 1877d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1878d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1879d382aafbSBarry Smith #endif 1880d382aafbSBarry Smith 1881d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1882d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1883d382aafbSBarry Smith #endif 1884d382aafbSBarry Smith 1885d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1886d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1887d382aafbSBarry Smith #endif 1888d382aafbSBarry Smith 1889d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1890d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1891d382aafbSBarry Smith #endif 1892d382aafbSBarry Smith 1893d382aafbSBarry Smith #endif 1894d382aafbSBarry Smith 1895d382aafbSBarry Smith /* 1896d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1897d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1898d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1899d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1900d382aafbSBarry Smith ugly extern "C" {} wrappers. 1901d382aafbSBarry Smith */ 1902d382aafbSBarry Smith #if defined(__cplusplus) 1903d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 1904d382aafbSBarry Smith # define EXTERN_C_END } 1905d382aafbSBarry Smith #else 1906d382aafbSBarry Smith # define EXTERN_C_BEGIN 1907d382aafbSBarry Smith # define EXTERN_C_END 1908d382aafbSBarry Smith #endif 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1911d382aafbSBarry Smith 1912d382aafbSBarry Smith /*MC 1913d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1914d382aafbSBarry Smith communication 1915d382aafbSBarry Smith 1916d382aafbSBarry Smith Level: beginner 1917d382aafbSBarry Smith 1918d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1919d382aafbSBarry Smith 1920d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1921d382aafbSBarry Smith M*/ 1922d382aafbSBarry Smith 1923d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1924014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1925014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1926d382aafbSBarry Smith #endif 1927d382aafbSBarry Smith 1928d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1929d382aafbSBarry Smith 1930d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1931d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1932d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1933d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1934d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1935d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1936d382aafbSBarry Smith 193761b0d812SBarry Smith /*@C 193861b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 193961b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 194061b0d812SBarry Smith 194161b0d812SBarry Smith Not Collective 194261b0d812SBarry Smith 194361b0d812SBarry Smith Input Parameter: 194461b0d812SBarry Smith . a - the PetscInt value 194561b0d812SBarry Smith 194661b0d812SBarry Smith Output Parameter: 194761b0d812SBarry Smith . b - the resulting PetscBLASInt value 194861b0d812SBarry Smith 194961b0d812SBarry Smith Level: advanced 195061b0d812SBarry Smith 19511fd49c25SBarry Smith Not available from Fortran 19521fd49c25SBarry Smith 195361b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast() 195461b0d812SBarry Smith @*/ 1955c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 1956c5df96a5SBarry Smith { 1957c5df96a5SBarry Smith PetscFunctionBegin; 1958ab7117d1SBarry Smith *b = (PetscBLASInt)(a); 1959c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 1960c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 1961c5df96a5SBarry Smith #endif 1962c5df96a5SBarry Smith PetscFunctionReturn(0); 1963c5df96a5SBarry Smith } 1964c5df96a5SBarry Smith 196561b0d812SBarry Smith /*@C 196661b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 196761b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 196861b0d812SBarry Smith 196961b0d812SBarry Smith Not Collective 197061b0d812SBarry Smith 197161b0d812SBarry Smith Input Parameter: 197261b0d812SBarry Smith . a - the PetscInt value 197361b0d812SBarry Smith 197461b0d812SBarry Smith Output Parameter: 197561b0d812SBarry Smith . b - the resulting PetscMPIInt value 197661b0d812SBarry Smith 197761b0d812SBarry Smith Level: advanced 197861b0d812SBarry Smith 19791fd49c25SBarry Smith Not available from Fortran 19801fd49c25SBarry Smith 198161b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast() 198261b0d812SBarry Smith @*/ 19834dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 19844dc2109aSBarry Smith { 19854dc2109aSBarry Smith PetscFunctionBegin; 1986ab7117d1SBarry Smith *b = (PetscMPIInt)(a); 19874dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 19884dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 19894dc2109aSBarry Smith #endif 19904dc2109aSBarry Smith PetscFunctionReturn(0); 19914dc2109aSBarry Smith } 19924dc2109aSBarry Smith 1993bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 19942f18eb33SBarry Smith 19952f18eb33SBarry Smith /*@C 19962f18eb33SBarry Smith 19972f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 19982f18eb33SBarry Smith 19992f18eb33SBarry Smith Not Collective 20002f18eb33SBarry Smith 20012f18eb33SBarry Smith Input Parameter: 20022f18eb33SBarry Smith + a - the PetscReal value 20032f18eb33SBarry Smith - b - the second value 20042f18eb33SBarry Smith 2005390e1bf2SBarry Smith Returns: 2006390e1bf2SBarry Smith the result as a PetscInt value 20072f18eb33SBarry Smith 2008bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 20092f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 20102f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 20112f18eb33SBarry Smith 2012e28ce29aSPatrick Sanan Developers Note: 2013e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 20142f18eb33SBarry Smith 20152f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 20162f18eb33SBarry Smith 20171fd49c25SBarry Smith Not available from Fortran 20181fd49c25SBarry Smith 20192f18eb33SBarry Smith Level: advanced 20202f18eb33SBarry Smith 2021390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 20222f18eb33SBarry Smith @*/ 20232f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 20242f18eb33SBarry Smith { 2025bafee8b4SSatish Balay PetscInt64 r; 20262f18eb33SBarry Smith 2027bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 20282f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 20292f18eb33SBarry Smith return (PetscInt) r; 20302f18eb33SBarry Smith } 20312f18eb33SBarry Smith 20322f18eb33SBarry Smith /*@C 20332f18eb33SBarry Smith 20342f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 20352f18eb33SBarry Smith 20362f18eb33SBarry Smith Not Collective 20372f18eb33SBarry Smith 20382f18eb33SBarry Smith Input Parameter: 20392f18eb33SBarry Smith + a - the PetscInt value 20402f18eb33SBarry Smith - b - the second value 20412f18eb33SBarry Smith 2042390e1bf2SBarry Smith Returns: 2043390e1bf2SBarry Smith the result as a PetscInt value 20442f18eb33SBarry Smith 2045bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 20462f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 20472f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 20482f18eb33SBarry Smith 20491fd49c25SBarry Smith Not available from Fortran 20501fd49c25SBarry Smith 20512f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 20522f18eb33SBarry Smith 20532f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 20542f18eb33SBarry Smith 20552f18eb33SBarry Smith Level: advanced 20562f18eb33SBarry Smith 2057390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 20582f18eb33SBarry Smith @*/ 20592f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 20602f18eb33SBarry Smith { 2061bafee8b4SSatish Balay PetscInt64 r; 20622f18eb33SBarry Smith 2063bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 20642f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 20652f18eb33SBarry Smith return (PetscInt) r; 20662f18eb33SBarry Smith } 20672f18eb33SBarry Smith 2068f91af8c7SBarry Smith /*@C 2069f91af8c7SBarry Smith 2070f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2071f91af8c7SBarry Smith 2072f91af8c7SBarry Smith Not Collective 2073f91af8c7SBarry Smith 2074f91af8c7SBarry Smith Input Parameter: 2075f91af8c7SBarry Smith + a - the PetscInt value 2076f91af8c7SBarry Smith - b - the second value 2077f91af8c7SBarry Smith 2078390e1bf2SBarry Smith Returns: 2079390e1bf2SBarry Smith the result as a PetscInt value 2080f91af8c7SBarry Smith 2081bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2082f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2083f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2084f91af8c7SBarry Smith 2085f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2086f91af8c7SBarry Smith 2087f5f57ec0SBarry Smith Not available from Fortran 2088f5f57ec0SBarry Smith 2089f91af8c7SBarry Smith Level: advanced 2090f91af8c7SBarry Smith 2091390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2092f91af8c7SBarry Smith @*/ 2093f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2094f91af8c7SBarry Smith { 2095bafee8b4SSatish Balay PetscInt64 r; 2096f91af8c7SBarry Smith 2097bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2098f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2099f91af8c7SBarry Smith return (PetscInt) r; 2100f91af8c7SBarry Smith } 2101f91af8c7SBarry Smith 21022f18eb33SBarry Smith /*@C 21032f18eb33SBarry Smith 21042f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 21052f18eb33SBarry Smith 21062f18eb33SBarry Smith Not Collective 21072f18eb33SBarry Smith 21082f18eb33SBarry Smith Input Parameter: 21092f18eb33SBarry Smith + a - the PetscInt value 21102f18eb33SBarry Smith - b - the second value 21112f18eb33SBarry Smith 21122f18eb33SBarry Smith Output Parameter:ma 2113390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 21142f18eb33SBarry Smith 2115bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 21162f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 21172f18eb33SBarry Smith 2118f5f57ec0SBarry Smith Not available from Fortran 2119f5f57ec0SBarry Smith 2120220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 21212f18eb33SBarry Smith 21222f18eb33SBarry Smith Level: advanced 21232f18eb33SBarry Smith 2124220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 21252f18eb33SBarry Smith @*/ 21262f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 21272f18eb33SBarry Smith { 2128bafee8b4SSatish Balay PetscInt64 r; 21292f18eb33SBarry Smith 21302f18eb33SBarry Smith PetscFunctionBegin; 2131bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 21322f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 21332f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 21342f18eb33SBarry Smith #endif 2135f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2136f91af8c7SBarry Smith PetscFunctionReturn(0); 2137f91af8c7SBarry Smith } 2138f91af8c7SBarry Smith 2139f91af8c7SBarry Smith /*@C 2140f91af8c7SBarry Smith 2141fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2142f91af8c7SBarry Smith 2143f91af8c7SBarry Smith Not Collective 2144f91af8c7SBarry Smith 2145f91af8c7SBarry Smith Input Parameter: 2146f91af8c7SBarry Smith + a - the PetscInt value 2147f91af8c7SBarry Smith - b - the second value 2148f91af8c7SBarry Smith 2149f91af8c7SBarry Smith Output Parameter:ma 2150390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2151f91af8c7SBarry Smith 2152bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2153f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2154f91af8c7SBarry Smith 2155f5f57ec0SBarry Smith Not available from Fortran 2156f5f57ec0SBarry Smith 2157f91af8c7SBarry Smith Level: advanced 2158f91af8c7SBarry Smith 2159390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2160f91af8c7SBarry Smith @*/ 2161f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2162f91af8c7SBarry Smith { 2163bafee8b4SSatish Balay PetscInt64 r; 2164f91af8c7SBarry Smith 2165f91af8c7SBarry Smith PetscFunctionBegin; 2166bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2167f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2168f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2169f91af8c7SBarry Smith #endif 2170f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 21712f18eb33SBarry Smith PetscFunctionReturn(0); 21722f18eb33SBarry Smith } 2173c5df96a5SBarry Smith 2174d382aafbSBarry Smith /* 21752981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2176d382aafbSBarry Smith */ 2177d382aafbSBarry Smith #if defined(hz) 2178d382aafbSBarry Smith # undef hz 2179d382aafbSBarry Smith #endif 2180d382aafbSBarry Smith 218115a5570dSLisandro Dalcin #include <limits.h> 218215a5570dSLisandro Dalcin 218315a5570dSLisandro Dalcin /* The number of bits in a byte */ 218415a5570dSLisandro Dalcin 218515a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 218615a5570dSLisandro Dalcin 2187d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2188d382aafbSBarry Smith 2189d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2190d382aafbSBarry Smith # include <sys/param.h> 2191d382aafbSBarry Smith #endif 2192d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2193d382aafbSBarry Smith # include <sys/types.h> 2194d382aafbSBarry Smith #endif 2195d382aafbSBarry Smith #if defined(MAXPATHLEN) 2196d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2197d382aafbSBarry Smith #elif defined(MAX_PATH) 2198d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2199d382aafbSBarry Smith #elif defined(_MAX_PATH) 2200d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2201d382aafbSBarry Smith #else 2202d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2203d382aafbSBarry Smith #endif 2204d382aafbSBarry Smith 2205d382aafbSBarry Smith /*MC 2206d382aafbSBarry Smith 220766d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 220866d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 220966d79e26SBarry Smith 221066d79e26SBarry Smith 221166d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 221266d79e26SBarry Smith 221366d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 221466d79e26SBarry Smith 221566d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 221666d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 221766d79e26SBarry Smith 221866d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 221966d79e26SBarry Smith 222066d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 222166d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 222266d79e26SBarry Smith version number (x.y.z). 222366d79e26SBarry Smith 222466d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 222566d79e26SBarry Smith 222666d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 222766d79e26SBarry Smith 222866d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 222966d79e26SBarry Smith 223066d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 223166d79e26SBarry Smith 223266d79e26SBarry Smith Level: intermediate 223366d79e26SBarry Smith 223466d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 223566d79e26SBarry Smith 223666d79e26SBarry Smith M*/ 223766d79e26SBarry Smith 223866d79e26SBarry Smith /*MC 223966d79e26SBarry Smith 22401b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 22411b266c99SBarry Smith of every function and module definition you need something like 2242d382aafbSBarry Smith 2243d382aafbSBarry Smith $ 2244af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 22450f665fc7SPatrick Sanan $ use petscXXX 22461b266c99SBarry Smith 2247692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 22481b266c99SBarry Smith 2249d382aafbSBarry Smith $ XXX variablename 22501b266c99SBarry Smith $ type(tXXX) variablename 22511b266c99SBarry Smith 2252692afcd8SPatrick Sanan For example, 22531b266c99SBarry Smith 2254bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 22551b266c99SBarry Smith $ use petscvec 2256d382aafbSBarry Smith $ 2257692afcd8SPatrick Sanan $ Vec b 2258692afcd8SPatrick Sanan $ type(tVec) x 2259d382aafbSBarry Smith 2260d382aafbSBarry Smith Level: beginner 2261d382aafbSBarry Smith 2262d382aafbSBarry Smith M*/ 2263d382aafbSBarry Smith 2264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 227027710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 22715f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2272d382aafbSBarry Smith 2273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 227422ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 227660e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2277d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 22816c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 228217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 228317d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 22855569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 228717df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 228939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2291745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 229239f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 22966c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 22976c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2298e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2299d382aafbSBarry Smith 2300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2302d382aafbSBarry Smith 230376bdecfbSBarry Smith /*J 2304d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2305d382aafbSBarry Smith 2306d382aafbSBarry Smith Level: beginner 2307d382aafbSBarry Smith 2308e28ce29aSPatrick Sanan Notes: 2309e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 231025ccb61fSToby Isaac with the option --download-sprng or --download-random123 2311d382aafbSBarry Smith 23128f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 231376bdecfbSBarry Smith J*/ 231419fd82e9SBarry Smith typedef const char* PetscRandomType; 2315d382aafbSBarry Smith #define PETSCRAND "rand" 2316d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2317d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2318c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 231925ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2320d382aafbSBarry Smith 2321d382aafbSBarry Smith /* Logging support */ 2322014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2323d382aafbSBarry Smith 2324607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2325d382aafbSBarry Smith 2326d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2327140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2328d382aafbSBarry Smith 2329bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 233019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 233219fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2333685405a1SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);} 2334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2335d382aafbSBarry Smith 2336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2345d382aafbSBarry Smith 2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 235397540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 23548a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 235597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2356d382aafbSBarry Smith 235730815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 235830815ce0SLisandro Dalcin 23599860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 23609860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool); 23629860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool); 2363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2370c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2371e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2372c891a504SStefano Zampini #endif 2373d382aafbSBarry Smith 2374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2377d382aafbSBarry Smith 2378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2384d382aafbSBarry Smith 2385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2390cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2391cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2392d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2393d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2394d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2395d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 23966afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 23976afbe7ddSJed Brown MPI_Request**,MPI_Request**, 23986afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 23996afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 24006afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2401d382aafbSBarry Smith 24026145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 24036145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 24046145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 24056145cd65SJed Brown 2406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2407d382aafbSBarry Smith 2408ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2409ce94432eSBarry Smith 241045487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 241145487dadSJed Brown 2412d382aafbSBarry Smith struct _n_PetscSubcomm { 2413d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2414d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2415306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 241645487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 241745487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2418708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 241945487dadSJed Brown PetscSubcommType type; 2420e5acf8a4SHong Zhang char *subcommprefix; 2421d382aafbSBarry Smith }; 2422d382aafbSBarry Smith 2423c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2424306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 242536be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 243065d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2431053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2432f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2433e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2434d382aafbSBarry Smith 24359962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 24369962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 24379962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 24389962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 24399962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 24409962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 24419962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 24429962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 24439962606eSBarry Smith 24445e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 24455f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 24465f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 24475f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 24485f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 24495e71baefSBarry Smith 2450a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2451a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2452a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2453a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2454a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2455a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2456a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2457a32e93adSJunchao Zhang 245813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 24590f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 246013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2461137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2462137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2463137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 246413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 246513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 24660f453b92SJed Brown 24675e71baefSBarry Smith 2468471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2469471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2470471ecdacSJed Brown * possible. */ 247135005c2bSLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,(size_t)count,(void**)slot);} 2472d382aafbSBarry Smith 24739de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 24749de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 24759de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 24769de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 24779de0f6ecSBarry Smith 2478ace2fbaeSBarry Smith #include <stdarg.h> 2479ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2480ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2481ace2fbaeSBarry Smith 2482268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2483fbfcfee5SBarry Smith 24841f817a21SBarry Smith /*@C 24851f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 24861f817a21SBarry Smith 24871f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 24881f817a21SBarry Smith 24891f817a21SBarry Smith Input Parameters: 24901f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 24911f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 24921f817a21SBarry Smith 2493850545d0SSatish Balay Level: intermediate 2494850545d0SSatish Balay 2495f5f57ec0SBarry Smith Not available from Fortran 2496f5f57ec0SBarry Smith 24971f817a21SBarry Smith Options Database: 2498063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 24991f817a21SBarry Smith @*/ 2500dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2501dff31646SBarry Smith { 2502dff31646SBarry Smith size_t len; 2503dff31646SBarry Smith char *vstring; 2504dff31646SBarry Smith PetscErrorCode ierr; 2505dff31646SBarry Smith 25061f817a21SBarry Smith PetscFunctionBegin; 25078d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2508dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 250935005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2510580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2511dff31646SBarry Smith if (set) *set = PETSC_TRUE; 25121f817a21SBarry Smith PetscFunctionReturn(0); 2513dff31646SBarry Smith } 2514dff31646SBarry Smith 2515b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2516fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2517fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2518f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2519fe278a28SBarry Smith 2520f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2521f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2522b967cddfSBarry Smith 25239f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 25249f4d3c52SBarry Smith 252504102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2526763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2527dff31646SBarry Smith 252868e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 25295dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2530d382aafbSBarry Smith 2531b2566f29SBarry Smith 2532b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2533b2566f29SBarry Smith /* 2534b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2535b2566f29SBarry Smith */ 25368f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 253777a5e07dSBarry Smith 253877a5e07dSBarry Smith /*MC 253977a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 254077a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 254177a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 254277a5e07dSBarry Smith 2543d083f849SBarry Smith Collective 254477a5e07dSBarry Smith 254577a5e07dSBarry Smith Synopsis: 254677a5e07dSBarry Smith #include <petscsys.h> 254777a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 254877a5e07dSBarry Smith 254977a5e07dSBarry Smith Input Parameters: 255077a5e07dSBarry Smith + indata - pointer to the input data to be reduced 255177a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 255277a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 255377a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 255477a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 255577a5e07dSBarry Smith 255677a5e07dSBarry Smith Output Parameter: 255777a5e07dSBarry Smith . outdata - the reduced values 255877a5e07dSBarry Smith 2559e28ce29aSPatrick Sanan Notes: 2560e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 256177a5e07dSBarry Smith 256277a5e07dSBarry Smith Level: developer 256377a5e07dSBarry Smith 256477a5e07dSBarry Smith .seealso: MPI_Allreduce() 256577a5e07dSBarry Smith M*/ 2566fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2567b2566f29SBarry Smith #else 2568b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2569b2566f29SBarry Smith #endif 2570b2566f29SBarry Smith 25716f7079ddSSatish Balay #if defined(PETSC_HAVE_MPI_WIN_CREATE_FEATURE) 25728198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 25738198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 25742f065d89SBarry Smith #endif 25758198064fSBarry Smith 257612801b39SBarry Smith /* 257712801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 257812801b39SBarry Smith */ 25798ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 25808ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 258112801b39SBarry Smith 2582d382aafbSBarry Smith #endif 2583