1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 73ca90d2dSJacob Faibussowitsch 8d382aafbSBarry Smith /* ========================================================================== */ 9d382aafbSBarry Smith /* 10d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 111c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 121c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 131c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 141cc8b206SBarry Smith directory as the other PETSc include files. 15d382aafbSBarry Smith */ 162c8e378dSBarry Smith #include <petscconf.h> 171c77a0c5SBarry Smith #include <petscconf_poison.h> 182c8e378dSBarry Smith #include <petscfix.h> 19bde483f2SJacob Faibussowitsch #include <petscmacros.h> 2033bb201bSJacob Faibussowitsch 21ac09b921SBarry Smith /* SUBMANSEC = Sys */ 22ac09b921SBarry Smith 2373fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2473fca5a0SBarry Smith /* 2573fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2673fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2773fca5a0SBarry Smith */ 28216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2973fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 3073fca5a0SBarry Smith #endif 31216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3273fca5a0SBarry Smith #define _BSD_SOURCE 3373fca5a0SBarry Smith #endif 3407f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3507f00807SSatish Balay #define _DEFAULT_SOURCE 3607f00807SSatish Balay #endif 37ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 38ea0fecefSShri Abhyankar #define _GNU_SOURCE 39ea0fecefSShri Abhyankar #endif 4073fca5a0SBarry Smith #endif 4173fca5a0SBarry Smith 42df4397b0SStefano Zampini #include <petscsystypes.h> 43df4397b0SStefano Zampini 44d382aafbSBarry Smith /* ========================================================================== */ 45d382aafbSBarry Smith 46d382aafbSBarry Smith /* 47d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 48d382aafbSBarry Smith 49d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 50d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 51d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 52d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 53d382aafbSBarry Smith mpicxx.h directly in their code 54d382aafbSBarry Smith */ 55fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 56d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 57fa9e63e2SJed Brown #endif 58fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 59d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 60fa9e63e2SJed Brown #endif 61e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 62e771154cSJed Brown #include <petsc/mpiuni/mpi.h> 63e771154cSJed Brown #else 642c8e378dSBarry Smith #include <mpi.h> 65e771154cSJed Brown #endif 6665013866SBarry Smith 67d382aafbSBarry Smith /* 68a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 69a7886beaSBarry Smith This usually happens because 70a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 71a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 72a7886beaSBarry Smith */ 73a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 74c9b973beSBarry Smith #if !defined(MPIUNI_H) 75a7886beaSBarry Smith #error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 76a7886beaSBarry Smith #endif 7741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 7841f4af4cSSatish Balay #if !defined(I_MPI_NUMVERSION) 7941f4af4cSSatish Balay #error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 8041f4af4cSSatish Balay #elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 8141f4af4cSSatish Balay #error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 8241f4af4cSSatish Balay #endif 8341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 8441f4af4cSSatish Balay #if !defined(MVAPICH2_NUMVERSION) 8541f4af4cSSatish Balay #error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 8641f4af4cSSatish Balay #elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 8741f4af4cSSatish Balay #error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 8841f4af4cSSatish Balay #endif 89a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 9041f4af4cSSatish Balay #if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 91a7886beaSBarry Smith #error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 921c284764SMin RK #elif (MPICH_NUMVERSION / 100000000 != PETSC_HAVE_MPICH_NUMVERSION / 100000000) || (MPICH_NUMVERSION / 100000 < PETSC_HAVE_MPICH_NUMVERSION / 100000) || (MPICH_NUMVERSION / 100000 == PETSC_HAVE_MPICH_NUMVERSION / 100000 && MPICH_NUMVERSION % 100000 / 1000 < PETSC_HAVE_MPICH_NUMVERSION % 100000 / 1000) 93a7886beaSBarry Smith #error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 94a7886beaSBarry Smith #endif 95a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 96a7886beaSBarry Smith #if !defined(OMPI_MAJOR_VERSION) 97a7886beaSBarry Smith #error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 981c284764SMin RK #elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION < PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_MINOR_VERSION == PETSC_HAVE_OMPI_MINOR_VERSION && OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 99c3ac57cfSSatish Balay #error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 100a7886beaSBarry Smith #endif 101c93fae50SJacob Faibussowitsch #define PETSC_MPI_COMM_FMT "p" 102c93fae50SJacob Faibussowitsch #define PETSC_MPI_WIN_FMT "p" 103d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 104d97fd468SStefano Zampini #if !defined(MSMPI_VER) 105d97fd468SStefano Zampini #error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 106d97fd468SStefano Zampini #elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 107d97fd468SStefano Zampini #error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 108d97fd468SStefano Zampini #endif 109d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 110d97fd468SStefano Zampini #error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 111a7886beaSBarry Smith #endif 112a7886beaSBarry Smith 113c93fae50SJacob Faibussowitsch /* Format specifier for printing MPI_Comm (most implementations use 'int' as type) */ 114c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_COMM_FMT) 115c93fae50SJacob Faibussowitsch #define PETSC_MPI_COMM_FMT "d" 116c93fae50SJacob Faibussowitsch #endif 117c93fae50SJacob Faibussowitsch 118c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_WIN_FMT) 119c93fae50SJacob Faibussowitsch #define PETSC_MPI_WIN_FMT "d" 120c93fae50SJacob Faibussowitsch #endif 121c93fae50SJacob Faibussowitsch 122a7886beaSBarry Smith /* 1232981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 124d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 125d382aafbSBarry Smith */ 126d382aafbSBarry Smith #include <stdio.h> 127d382aafbSBarry Smith 128d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 129d382aafbSBarry Smith #if !defined(MPIAPI) 130d382aafbSBarry Smith #define MPIAPI 131d382aafbSBarry Smith #endif 132d382aafbSBarry Smith 133*93d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_ENUM PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscEnum); 134*93d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_BOOL PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscBool); 135e28ce29aSPatrick Sanan 136e28ce29aSPatrick Sanan /*MC 13787497f52SBarry Smith MPIU_INT - Portable MPI datatype corresponding to `PetscInt` independent of the precision of `PetscInt` 138e28ce29aSPatrick Sanan 139e28ce29aSPatrick Sanan Notes: 14087497f52SBarry Smith In MPI calls that require an MPI datatype that matches a `PetscInt` or array of `PetscInt` values, pass this value. 141e28ce29aSPatrick Sanan 142e28ce29aSPatrick Sanan Level: beginner 143e28ce29aSPatrick Sanan 144db781477SPatrick Sanan .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 145e28ce29aSPatrick Sanan M*/ 146e28ce29aSPatrick Sanan 1477cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 148b7b8f77aSBarry Smith 149d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 150bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64 151a05e1a72SSatish Balay #define PetscInt_FMT PetscInt64_FMT 152d382aafbSBarry Smith #else 153d382aafbSBarry Smith #define MPIU_INT MPI_INT 154a05e1a72SSatish Balay #define PetscInt_FMT "d" 155d382aafbSBarry Smith #endif 156d382aafbSBarry Smith 157503cfb0cSBarry Smith /* 158503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 159503cfb0cSBarry Smith */ 160*93d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_SIZE_T PETSC_ATTRIBUTE_MPI_TYPE_TAG(size_t); 161d382aafbSBarry Smith 162d382aafbSBarry Smith /* 163d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 164d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 165d382aafbSBarry Smith */ 166014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDOUT; 167d382aafbSBarry Smith 168d382aafbSBarry Smith /* 169d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 170d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 171d382aafbSBarry Smith */ 172014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDERR; 173d382aafbSBarry Smith 174c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 175c8b9133aSSatish Balay 1765c993f7fSStefano Zampini #if defined(__NEC__) 1775c993f7fSStefano Zampini #define PetscPragmaSIMD _Pragma("_NEC ivdep") 1785c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 179c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("vector") 1801dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 181c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("GCC ivdep") 182e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 183e5518150SSatish Balay #if defined(_MSC_VER) 184160a5775SAli Reza Khaz'ali #define PetscPragmaSIMD __pragma(omp simd) 185e5518150SSatish Balay #else 186e5518150SSatish Balay #define PetscPragmaSIMD _Pragma("omp simd") 187e5518150SSatish Balay #endif 188c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 189c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("_CRI ivdep") 190c8b9133aSSatish Balay #else 191c8b9133aSSatish Balay #define PetscPragmaSIMD 192c8b9133aSSatish Balay #endif 193c8b9133aSSatish Balay 194d382aafbSBarry Smith /* 195d382aafbSBarry Smith Declare extern C stuff after including external header files 196d382aafbSBarry Smith */ 197d382aafbSBarry Smith 1986a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 19970b3c8c7SBarry Smith 2006edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 2018b49ba18SBarry Smith /* 202390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 2038b49ba18SBarry Smith */ 2048b49ba18SBarry Smith #include <petscmath.h> 2058b49ba18SBarry Smith 2066a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 207d382aafbSBarry Smith 208d382aafbSBarry Smith /*MC 2090298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 210d382aafbSBarry Smith 211d382aafbSBarry Smith Level: beginner 212d382aafbSBarry Smith 213e28ce29aSPatrick Sanan Note: 21487497f52SBarry Smith Accepted by many PETSc functions to not set a parameter and instead use some default 215d382aafbSBarry Smith 21687497f52SBarry Smith Fortran Note: 21787497f52SBarry Smith This macro does not exist in Fortran; you must use `PETSC_NULL_INTEGER`, `PETSC_NULL_DOUBLE_PRECISION` etc 218d382aafbSBarry Smith 219db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_DETERMINE` 220d382aafbSBarry Smith 221d382aafbSBarry Smith M*/ 2220298fd71SBarry Smith #define PETSC_IGNORE NULL 223d382aafbSBarry Smith 224c528d872SBarry Smith /* This is deprecated */ 225c528d872SBarry Smith #define PETSC_NULL NULL 226c528d872SBarry Smith 227d382aafbSBarry Smith /*MC 228557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 229557d4da8SBarry Smith where you wish PETSc to use the default. 230557d4da8SBarry Smith 231557d4da8SBarry Smith Level: beginner 232557d4da8SBarry Smith 233db781477SPatrick Sanan .seealso: `PETSC_DEFAULT`, `PETSC_IGNORE`, `PETSC_DETERMINE` 234557d4da8SBarry Smith 235557d4da8SBarry Smith M*/ 236557d4da8SBarry Smith #define PETSC_DECIDE -1 237557d4da8SBarry Smith 238557d4da8SBarry Smith /*MC 239d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 240d382aafbSBarry Smith where you wish PETSc to compute the required value. 241d382aafbSBarry Smith 242d382aafbSBarry Smith Level: beginner 243d382aafbSBarry Smith 244e28ce29aSPatrick Sanan Developer Note: 24587497f52SBarry Smith I would like to use const `PetscInt` `PETSC_DETERMINE` = `PETSC_DECIDE`; but for 24687497f52SBarry Smith some reason this is not allowed by the standard even though `PETSC_DECIDE` is a constant value. 247557d4da8SBarry Smith 248db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_IGNORE`, `VecSetSizes()` 249d382aafbSBarry Smith 250d382aafbSBarry Smith M*/ 251d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 252d382aafbSBarry Smith 253d382aafbSBarry Smith /*MC 254557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 255557d4da8SBarry Smith where you wish PETSc to use the default. 256557d4da8SBarry Smith 257557d4da8SBarry Smith Level: beginner 258557d4da8SBarry Smith 25987497f52SBarry Smith Fortran Note: 26087497f52SBarry Smith You need to use `PETSC_DEFAULT_INTEGER` or `PETSC_DEFAULT_REAL`. 261557d4da8SBarry Smith 262db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_IGNORE`, `PETSC_DETERMINE` 263557d4da8SBarry Smith 264557d4da8SBarry Smith M*/ 265557d4da8SBarry Smith #define PETSC_DEFAULT -2 266557d4da8SBarry Smith 267557d4da8SBarry Smith /*MC 26887497f52SBarry Smith PETSC_COMM_WORLD - the equivalent of the `MPI_COMM_WORLD` communicator which represents 269ea8fe74dSBarry Smith all the processes that PETSc knows about. 270d382aafbSBarry Smith 271d382aafbSBarry Smith Level: beginner 272d382aafbSBarry Smith 273e28ce29aSPatrick Sanan Notes: 27487497f52SBarry Smith By default `PETSC_COMM_WORLD` and `MPI_COMM_WORLD` are identical unless you wish to 27587497f52SBarry Smith run PETSc on ONLY a subset of `MPI_COMM_WORLD`. In that case create your new (smaller) 27687497f52SBarry Smith communicator, call it, say comm, and set `PETSC_COMM_WORLD` = comm BEFORE calling 27787497f52SBarry Smith PetscInitialize(), but after `MPI_Init()` has been called. 278a990b902SBarry Smith 27987497f52SBarry Smith The value of `PETSC_COMM_WORLD` should never be USED/accessed before `PetscInitialize()` 280a990b902SBarry Smith is called because it may not have a valid value yet. 281d382aafbSBarry Smith 282db781477SPatrick Sanan .seealso: `PETSC_COMM_SELF` 283d382aafbSBarry Smith 284d382aafbSBarry Smith M*/ 285014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 286d382aafbSBarry Smith 287d382aafbSBarry Smith /*MC 28887497f52SBarry Smith PETSC_COMM_SELF - This is always `MPI_COMM_SELF` 289d382aafbSBarry Smith 290d382aafbSBarry Smith Level: beginner 291d382aafbSBarry Smith 292e28ce29aSPatrick Sanan Notes: 293e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 294a990b902SBarry Smith 295db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD` 296d382aafbSBarry Smith 297d382aafbSBarry Smith M*/ 298d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 299d382aafbSBarry Smith 3006de5d289SStefano Zampini /*MC 3016de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 30287497f52SBarry Smith MPI with `MPI_Init_thread()`. 3036de5d289SStefano Zampini 3046de5d289SStefano Zampini Level: beginner 3056de5d289SStefano Zampini 3066de5d289SStefano Zampini Notes: 30787497f52SBarry Smith By default `PETSC_MPI_THREAD_REQUIRED` equals `MPI_THREAD_FUNNELED`. 3086de5d289SStefano Zampini 309db781477SPatrick Sanan .seealso: `PetscInitialize()` 3106de5d289SStefano Zampini 3116de5d289SStefano Zampini M*/ 3126de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 3136de5d289SStefano Zampini 314d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 3158ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 316014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 317014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 3184cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 319d382aafbSBarry Smith 320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm), PetscErrorCode (*)(MPI_Comm)); 321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm, MPI_Comm *, int *); 322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm *); 32357f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm, MPI_Comm *); 32457f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm, MPI_Comm *); 325d382aafbSBarry Smith 32659e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 32759e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 32859e55d94SJunchao Zhang #endif 32959e55d94SJunchao Zhang 33071438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 33171438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 33271438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 33371438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 33471438e86SJunchao Zhang #endif 33571438e86SJunchao Zhang 336540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 337540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 338540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool *); 339540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 340540e20f2SPierre Jolivet #endif 341540e20f2SPierre Jolivet 342d382aafbSBarry Smith /*MC 34387497f52SBarry Smith PetscMalloc - Allocates memory, One should use `PetscNew()`, `PetscMalloc1()` or `PetscCalloc1()` usually instead of this 344d382aafbSBarry Smith 345eca87e8dSBarry Smith Synopsis: 346aaa7dc30SBarry Smith #include <petscsys.h> 347eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 348eca87e8dSBarry Smith 349eca87e8dSBarry Smith Not Collective 350eca87e8dSBarry Smith 351d382aafbSBarry Smith Input Parameter: 352d382aafbSBarry Smith . m - number of bytes to allocate 353d382aafbSBarry Smith 354d382aafbSBarry Smith Output Parameter: 355d382aafbSBarry Smith . result - memory allocated 356d382aafbSBarry Smith 357d382aafbSBarry Smith Level: beginner 358d382aafbSBarry Smith 35949d7da52SJed Brown Notes: 36049d7da52SJed Brown Memory is always allocated at least double aligned 361d382aafbSBarry Smith 36287497f52SBarry Smith It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to `PetscFree()`. 363d382aafbSBarry Smith 364db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 365d382aafbSBarry Smith 366d382aafbSBarry Smith M*/ 367071fcb05SBarry Smith #define PetscMalloc(a, b) ((*PetscTrMalloc)((a), PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 368d382aafbSBarry Smith 369d382aafbSBarry Smith /*MC 3703221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 3713221ece2SMatthew G. Knepley 3723221ece2SMatthew G. Knepley Synopsis: 3733221ece2SMatthew G. Knepley #include <petscsys.h> 3743221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 3753221ece2SMatthew G. Knepley 3763221ece2SMatthew G. Knepley Not Collective 3773221ece2SMatthew G. Knepley 3783221ece2SMatthew G. Knepley Input Parameters: 3793221ece2SMatthew G. Knepley + m - number of bytes to allocate 38092f119d6SBarry Smith - result - previous memory 3813221ece2SMatthew G. Knepley 3823221ece2SMatthew G. Knepley Output Parameter: 3833221ece2SMatthew G. Knepley . result - new memory allocated 3843221ece2SMatthew G. Knepley 3853221ece2SMatthew G. Knepley Level: developer 3863221ece2SMatthew G. Knepley 3873221ece2SMatthew G. Knepley Notes: 3883221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 3893221ece2SMatthew G. Knepley 390db781477SPatrick Sanan .seealso: `PetscMalloc()`, `PetscFree()`, `PetscNew()` 3913221ece2SMatthew G. Knepley 3923221ece2SMatthew G. Knepley M*/ 3933221ece2SMatthew G. Knepley #define PetscRealloc(a, b) ((*PetscTrRealloc)((a), __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 3943221ece2SMatthew G. Knepley 3953221ece2SMatthew G. Knepley /*MC 39687497f52SBarry Smith PetscAddrAlign - Rounds up an address to `PETSC_MEMALIGN` alignment 397d382aafbSBarry Smith 398d382aafbSBarry Smith Synopsis: 399aaa7dc30SBarry Smith #include <petscsys.h> 400d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 401d382aafbSBarry Smith 402eca87e8dSBarry Smith Not Collective 403eca87e8dSBarry Smith 404eca87e8dSBarry Smith Input Parameters: 405eca87e8dSBarry Smith . addr - address to align (any pointer type) 406eca87e8dSBarry Smith 407d382aafbSBarry Smith Level: developer 408d382aafbSBarry Smith 409db781477SPatrick Sanan .seealso: `PetscMallocAlign()` 410d382aafbSBarry Smith 411d382aafbSBarry Smith M*/ 412d382aafbSBarry Smith #define PetscAddrAlign(a) (void *)((((PETSC_UINTPTR_T)(a)) + (PETSC_MEMALIGN - 1)) & ~(PETSC_MEMALIGN - 1)) 413d382aafbSBarry Smith 414d382aafbSBarry Smith /*MC 41587497f52SBarry Smith PetscCalloc - Allocates a cleared (zeroed) memory region aligned to `PETSC_MEMALIGN` 4168f51dc47SJunchao Zhang 4178f51dc47SJunchao Zhang Synopsis: 4188f51dc47SJunchao Zhang #include <petscsys.h> 4198f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 4208f51dc47SJunchao Zhang 4218f51dc47SJunchao Zhang Not Collective 4228f51dc47SJunchao Zhang 4238f51dc47SJunchao Zhang Input Parameter: 4248f51dc47SJunchao Zhang . m - number of bytes to allocate 4258f51dc47SJunchao Zhang 4268f51dc47SJunchao Zhang Output Parameter: 4278f51dc47SJunchao Zhang . result - memory allocated 4288f51dc47SJunchao Zhang 4298f51dc47SJunchao Zhang Level: beginner 4308f51dc47SJunchao Zhang 4318f51dc47SJunchao Zhang Notes: 4328f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 4338f51dc47SJunchao Zhang 4348f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 4358f51dc47SJunchao Zhang 436db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 4378f51dc47SJunchao Zhang 4388f51dc47SJunchao Zhang M*/ 43966122d6dSBarry Smith #define PetscCalloc(m, result) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m), (result)) 4408f51dc47SJunchao Zhang 4418f51dc47SJunchao Zhang /*MC 44287497f52SBarry Smith PetscMalloc1 - Allocates an array of memory aligned to `PETSC_MEMALIGN` 443d382aafbSBarry Smith 444eca87e8dSBarry Smith Synopsis: 445aaa7dc30SBarry Smith #include <petscsys.h> 446785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 447785e854fSJed Brown 448785e854fSJed Brown Not Collective 449785e854fSJed Brown 450785e854fSJed Brown Input Parameter: 451390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 452785e854fSJed Brown 453785e854fSJed Brown Output Parameter: 4541fe1b817SJunchao Zhang . r1 - memory allocated 455785e854fSJed Brown 456e28ce29aSPatrick Sanan Note: 457e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 45887497f52SBarry Smith multiply the number of elements requested by the `sizeof()` the type. For example use 459390e1bf2SBarry Smith $ PetscInt *id; 460390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 461390e1bf2SBarry Smith not 462390e1bf2SBarry Smith $ PetscInt *id; 463390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 464390e1bf2SBarry Smith 46587497f52SBarry Smith Does not zero the memory allocated, use `PetscCalloc1()` to obtain memory that has been zeroed. 466390e1bf2SBarry Smith 467390e1bf2SBarry Smith Level: beginner 468785e854fSJed Brown 469db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 470785e854fSJed Brown 471785e854fSJed Brown M*/ 47266122d6dSBarry Smith #define PetscMalloc1(m1, r1) PetscMallocA(1, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1)) 473785e854fSJed Brown 474785e854fSJed Brown /*MC 47587497f52SBarry Smith PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to `PETSC_MEMALIGN` 4761795a4d1SJed Brown 4771795a4d1SJed Brown Synopsis: 478aaa7dc30SBarry Smith #include <petscsys.h> 4791795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 4801795a4d1SJed Brown 4811795a4d1SJed Brown Not Collective 4821795a4d1SJed Brown 4831795a4d1SJed Brown Input Parameter: 4841795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 4851795a4d1SJed Brown 4861795a4d1SJed Brown Output Parameter: 4871fe1b817SJunchao Zhang . r1 - memory allocated 4881795a4d1SJed Brown 489e28ce29aSPatrick Sanan Notes: 49087497f52SBarry Smith See `PetsMalloc1()` for more details on usage. 491390e1bf2SBarry Smith 492390e1bf2SBarry Smith Level: beginner 4931795a4d1SJed Brown 494db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 4951795a4d1SJed Brown 4961795a4d1SJed Brown M*/ 49766122d6dSBarry Smith #define PetscCalloc1(m1, r1) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1)) 4981795a4d1SJed Brown 4991795a4d1SJed Brown /*MC 50087497f52SBarry Smith PetscMalloc2 - Allocates 2 arrays of memory both aligned to `PETSC_MEMALIGN` 501d382aafbSBarry Smith 502eca87e8dSBarry Smith Synopsis: 503aaa7dc30SBarry Smith #include <petscsys.h> 504dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 505eca87e8dSBarry Smith 506eca87e8dSBarry Smith Not Collective 507eca87e8dSBarry Smith 508d8d19677SJose E. Roman Input Parameters: 509d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 510dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 511d382aafbSBarry Smith 512d8d19677SJose E. Roman Output Parameters: 513d382aafbSBarry Smith + r1 - memory allocated in first chunk 514d382aafbSBarry Smith - r2 - memory allocated in second chunk 515d382aafbSBarry Smith 516d382aafbSBarry Smith Level: developer 517d382aafbSBarry Smith 518db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 519d382aafbSBarry Smith 520d382aafbSBarry Smith M*/ 52166122d6dSBarry Smith #define PetscMalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2)) 522d382aafbSBarry Smith 523d382aafbSBarry Smith /*MC 52487497f52SBarry Smith PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to `PETSC_MEMALIGN` 525d382aafbSBarry Smith 526eca87e8dSBarry Smith Synopsis: 527aaa7dc30SBarry Smith #include <petscsys.h> 5281795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 529eca87e8dSBarry Smith 530eca87e8dSBarry Smith Not Collective 531eca87e8dSBarry Smith 532d8d19677SJose E. Roman Input Parameters: 533d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5341795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5351795a4d1SJed Brown 536d8d19677SJose E. Roman Output Parameters: 5371795a4d1SJed Brown + r1 - memory allocated in first chunk 5381795a4d1SJed Brown - r2 - memory allocated in second chunk 5391795a4d1SJed Brown 5401795a4d1SJed Brown Level: developer 5411795a4d1SJed Brown 542db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 5431795a4d1SJed Brown 5441795a4d1SJed Brown M*/ 54566122d6dSBarry Smith #define PetscCalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2)) 5461795a4d1SJed Brown 5471795a4d1SJed Brown /*MC 54887497f52SBarry Smith PetscMalloc3 - Allocates 3 arrays of memory, all aligned to `PETSC_MEMALIGN` 549d382aafbSBarry Smith 550d382aafbSBarry Smith Synopsis: 551aaa7dc30SBarry Smith #include <petscsys.h> 552dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 553d382aafbSBarry Smith 554d382aafbSBarry Smith Not Collective 555d382aafbSBarry Smith 556d8d19677SJose E. Roman Input Parameters: 557d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 558d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 559dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 560d382aafbSBarry Smith 561d8d19677SJose E. Roman Output Parameters: 562d382aafbSBarry Smith + r1 - memory allocated in first chunk 563d382aafbSBarry Smith . r2 - memory allocated in second chunk 564d382aafbSBarry Smith - r3 - memory allocated in third chunk 565d382aafbSBarry Smith 566d382aafbSBarry Smith Level: developer 567d382aafbSBarry Smith 568db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc3()`, `PetscFree3()` 569d382aafbSBarry Smith 570d382aafbSBarry Smith M*/ 57166122d6dSBarry Smith #define PetscMalloc3(m1, r1, m2, r2, m3, r3) PetscMallocA(3, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3)) 572d382aafbSBarry Smith 573d382aafbSBarry Smith /*MC 57487497f52SBarry Smith PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 575d382aafbSBarry Smith 576eca87e8dSBarry Smith Synopsis: 577aaa7dc30SBarry Smith #include <petscsys.h> 5781795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 579eca87e8dSBarry Smith 580eca87e8dSBarry Smith Not Collective 581eca87e8dSBarry Smith 582d8d19677SJose E. Roman Input Parameters: 583d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 584d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 5851795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 5861795a4d1SJed Brown 587d8d19677SJose E. Roman Output Parameters: 5881795a4d1SJed Brown + r1 - memory allocated in first chunk 5891795a4d1SJed Brown . r2 - memory allocated in second chunk 5901795a4d1SJed Brown - r3 - memory allocated in third chunk 5911795a4d1SJed Brown 5921795a4d1SJed Brown Level: developer 5931795a4d1SJed Brown 594db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc2()`, `PetscMalloc3()`, `PetscFree3()` 5951795a4d1SJed Brown 5961795a4d1SJed Brown M*/ 59766122d6dSBarry Smith #define PetscCalloc3(m1, r1, m2, r2, m3, r3) PetscMallocA(3, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3)) 5981795a4d1SJed Brown 5991795a4d1SJed Brown /*MC 60087497f52SBarry Smith PetscMalloc4 - Allocates 4 arrays of memory, all aligned to `PETSC_MEMALIGN` 601d382aafbSBarry Smith 602d382aafbSBarry Smith Synopsis: 603aaa7dc30SBarry Smith #include <petscsys.h> 604dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 605d382aafbSBarry Smith 606d382aafbSBarry Smith Not Collective 607d382aafbSBarry Smith 608d8d19677SJose E. Roman Input Parameters: 609d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 610d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 611d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 612dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 613d382aafbSBarry Smith 614d8d19677SJose E. Roman Output Parameters: 615d382aafbSBarry Smith + r1 - memory allocated in first chunk 616d382aafbSBarry Smith . r2 - memory allocated in second chunk 617d382aafbSBarry Smith . r3 - memory allocated in third chunk 618d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 619d382aafbSBarry Smith 620d382aafbSBarry Smith Level: developer 621d382aafbSBarry Smith 622db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 623d382aafbSBarry Smith 624d382aafbSBarry Smith M*/ 6259371c9d4SSatish Balay #define PetscMalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 6269371c9d4SSatish Balay PetscMallocA(4, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4)) 627d382aafbSBarry Smith 628d382aafbSBarry Smith /*MC 62987497f52SBarry Smith PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 630d382aafbSBarry Smith 631eca87e8dSBarry Smith Synopsis: 632aaa7dc30SBarry Smith #include <petscsys.h> 6331795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 634eca87e8dSBarry Smith 635eca87e8dSBarry Smith Not Collective 636eca87e8dSBarry Smith 637e28ce29aSPatrick Sanan Input Parameters: 638d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 639d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 640d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6411795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6421795a4d1SJed Brown 643e28ce29aSPatrick Sanan Output Parameters: 6441795a4d1SJed Brown + r1 - memory allocated in first chunk 6451795a4d1SJed Brown . r2 - memory allocated in second chunk 6461795a4d1SJed Brown . r3 - memory allocated in third chunk 6471795a4d1SJed Brown - r4 - memory allocated in fourth chunk 6481795a4d1SJed Brown 6491795a4d1SJed Brown Level: developer 6501795a4d1SJed Brown 651db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 6521795a4d1SJed Brown 6531795a4d1SJed Brown M*/ 6549371c9d4SSatish Balay #define PetscCalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 6559371c9d4SSatish Balay PetscMallocA(4, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4)) 6561795a4d1SJed Brown 6571795a4d1SJed Brown /*MC 65887497f52SBarry Smith PetscMalloc5 - Allocates 5 arrays of memory, all aligned to `PETSC_MEMALIGN` 659d382aafbSBarry Smith 660d382aafbSBarry Smith Synopsis: 661aaa7dc30SBarry Smith #include <petscsys.h> 662dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 663d382aafbSBarry Smith 664d382aafbSBarry Smith Not Collective 665d382aafbSBarry Smith 666e28ce29aSPatrick Sanan Input Parameters: 667d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 668d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 669d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 670d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 671dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 672d382aafbSBarry Smith 673e28ce29aSPatrick Sanan Output Parameters: 674d382aafbSBarry Smith + r1 - memory allocated in first chunk 675d382aafbSBarry Smith . r2 - memory allocated in second chunk 676d382aafbSBarry Smith . r3 - memory allocated in third chunk 677d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 678d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 679d382aafbSBarry Smith 680d382aafbSBarry Smith Level: developer 681d382aafbSBarry Smith 682db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc5()`, `PetscFree5()` 683d382aafbSBarry Smith 684d382aafbSBarry Smith M*/ 6859371c9d4SSatish Balay #define PetscMalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 6869371c9d4SSatish Balay PetscMallocA(5, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5)) 687d382aafbSBarry Smith 688d382aafbSBarry Smith /*MC 68987497f52SBarry Smith PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 690d382aafbSBarry Smith 691eca87e8dSBarry Smith Synopsis: 692aaa7dc30SBarry Smith #include <petscsys.h> 6931795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 694eca87e8dSBarry Smith 695eca87e8dSBarry Smith Not Collective 696eca87e8dSBarry Smith 697e28ce29aSPatrick Sanan Input Parameters: 698d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 699d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 700d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 701d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7021795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7031795a4d1SJed Brown 704e28ce29aSPatrick Sanan Output Parameters: 7051795a4d1SJed Brown + r1 - memory allocated in first chunk 7061795a4d1SJed Brown . r2 - memory allocated in second chunk 7071795a4d1SJed Brown . r3 - memory allocated in third chunk 7081795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7091795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7101795a4d1SJed Brown 7111795a4d1SJed Brown Level: developer 7121795a4d1SJed Brown 713db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc5()`, `PetscFree5()` 7141795a4d1SJed Brown 7151795a4d1SJed Brown M*/ 7169371c9d4SSatish Balay #define PetscCalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 7179371c9d4SSatish Balay PetscMallocA(5, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5)) 718d382aafbSBarry Smith 719d382aafbSBarry Smith /*MC 72087497f52SBarry Smith PetscMalloc6 - Allocates 6 arrays of memory, all aligned to `PETSC_MEMALIGN` 721d382aafbSBarry Smith 722d382aafbSBarry Smith Synopsis: 723aaa7dc30SBarry Smith #include <petscsys.h> 724dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 725d382aafbSBarry Smith 726d382aafbSBarry Smith Not Collective 727d382aafbSBarry Smith 728e28ce29aSPatrick Sanan Input Parameters: 729d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 730d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 731d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 732d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 733d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 734dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 735d382aafbSBarry Smith 736e28ce29aSPatrick Sanan Output Parameteasr: 737d382aafbSBarry Smith + r1 - memory allocated in first chunk 738d382aafbSBarry Smith . r2 - memory allocated in second chunk 739d382aafbSBarry Smith . r3 - memory allocated in third chunk 740d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 741d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 742d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 743d382aafbSBarry Smith 744d382aafbSBarry Smith Level: developer 745d382aafbSBarry Smith 746db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc6()`, `PetscFree3()`, `PetscFree4()`, `PetscFree5()`, `PetscFree6()` 747d382aafbSBarry Smith 748d382aafbSBarry Smith M*/ 7499371c9d4SSatish Balay #define PetscMalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 7509371c9d4SSatish Balay PetscMallocA(6, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6)) 751d382aafbSBarry Smith 752d382aafbSBarry Smith /*MC 75387497f52SBarry Smith PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 754d382aafbSBarry Smith 755eca87e8dSBarry Smith Synopsis: 756aaa7dc30SBarry Smith #include <petscsys.h> 7571795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 758eca87e8dSBarry Smith 759eca87e8dSBarry Smith Not Collective 760eca87e8dSBarry Smith 761e28ce29aSPatrick Sanan Input Parameters: 762d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 763d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 764d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 765d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 766d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 7671795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 7681795a4d1SJed Brown 769e28ce29aSPatrick Sanan Output Parameters: 7701795a4d1SJed Brown + r1 - memory allocated in first chunk 7711795a4d1SJed Brown . r2 - memory allocated in second chunk 7721795a4d1SJed Brown . r3 - memory allocated in third chunk 7731795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7741795a4d1SJed Brown . r5 - memory allocated in fifth chunk 7751795a4d1SJed Brown - r6 - memory allocated in sixth chunk 7761795a4d1SJed Brown 7771795a4d1SJed Brown Level: developer 7781795a4d1SJed Brown 779db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc6()`, `PetscFree6()` 7801795a4d1SJed Brown 7811795a4d1SJed Brown M*/ 7829371c9d4SSatish Balay #define PetscCalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 7839371c9d4SSatish Balay PetscMallocA(6, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6)) 7841795a4d1SJed Brown 7851795a4d1SJed Brown /*MC 78687497f52SBarry Smith PetscMalloc7 - Allocates 7 arrays of memory, all aligned to `PETSC_MEMALIGN` 787d382aafbSBarry Smith 788d382aafbSBarry Smith Synopsis: 789aaa7dc30SBarry Smith #include <petscsys.h> 790dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 791d382aafbSBarry Smith 792d382aafbSBarry Smith Not Collective 793d382aafbSBarry Smith 794e28ce29aSPatrick Sanan Input Parameters: 795d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 796d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 797d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 798d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 799d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 800d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 801dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 802d382aafbSBarry Smith 803e28ce29aSPatrick Sanan Output Parameters: 804d382aafbSBarry Smith + r1 - memory allocated in first chunk 805d382aafbSBarry Smith . r2 - memory allocated in second chunk 806d382aafbSBarry Smith . r3 - memory allocated in third chunk 807d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 808d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 809d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 810eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 811d382aafbSBarry Smith 812d382aafbSBarry Smith Level: developer 813d382aafbSBarry Smith 814db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc7()`, `PetscFree7()` 815d382aafbSBarry Smith 816d382aafbSBarry Smith M*/ 8179371c9d4SSatish Balay #define PetscMalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 8189371c9d4SSatish Balay PetscMallocA(7, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6), (size_t)((size_t)m7) * sizeof(**(r7)), (r7)) 819d382aafbSBarry Smith 820d382aafbSBarry Smith /*MC 82187497f52SBarry Smith PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 8221795a4d1SJed Brown 8231795a4d1SJed Brown Synopsis: 824aaa7dc30SBarry Smith #include <petscsys.h> 8251795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8261795a4d1SJed Brown 8271795a4d1SJed Brown Not Collective 8281795a4d1SJed Brown 829e28ce29aSPatrick Sanan Input Parameters: 8301795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8311795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8321795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8331795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8341795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8351795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8361795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8371795a4d1SJed Brown 838e28ce29aSPatrick Sanan Output Parameters: 8391795a4d1SJed Brown + r1 - memory allocated in first chunk 8401795a4d1SJed Brown . r2 - memory allocated in second chunk 8411795a4d1SJed Brown . r3 - memory allocated in third chunk 8421795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8431795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8441795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8451795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8461795a4d1SJed Brown 8471795a4d1SJed Brown Level: developer 8481795a4d1SJed Brown 849db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc7()`, `PetscFree7()` 8501795a4d1SJed Brown 8511795a4d1SJed Brown M*/ 8529371c9d4SSatish Balay #define PetscCalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 8539371c9d4SSatish Balay PetscMallocA(7, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6), (size_t)((size_t)m7) * sizeof(**(r7)), (r7)) 8541795a4d1SJed Brown 8551795a4d1SJed Brown /*MC 85687497f52SBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to `PETSC_MEMALIGN` 857d382aafbSBarry Smith 858eca87e8dSBarry Smith Synopsis: 859aaa7dc30SBarry Smith #include <petscsys.h> 860b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 861eca87e8dSBarry Smith 862eca87e8dSBarry Smith Not Collective 863eca87e8dSBarry Smith 864d382aafbSBarry Smith Output Parameter: 865b00a9115SJed Brown . result - memory allocated, sized to match pointer type 866d382aafbSBarry Smith 867d382aafbSBarry Smith Level: beginner 868d382aafbSBarry Smith 869db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscMalloc()`, `PetscNewLog()`, `PetscCalloc1()`, `PetscMalloc1()` 870d382aafbSBarry Smith 871d382aafbSBarry Smith M*/ 872b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1, (b)) 873ad0619ddSBarry Smith 874ad0619ddSBarry Smith /*MC 87587497f52SBarry Smith PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to `PETSC_MEMALIGN`. Associates the memory allocated 87687497f52SBarry Smith with the given object using `PetscLogObjectMemory()`. 877ad0619ddSBarry Smith 878ad0619ddSBarry Smith Synopsis: 879aaa7dc30SBarry Smith #include <petscsys.h> 880b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 881ad0619ddSBarry Smith 882ad0619ddSBarry Smith Not Collective 883ad0619ddSBarry Smith 884ad0619ddSBarry Smith Input Parameter: 885b00a9115SJed Brown . obj - object memory is logged to 886ad0619ddSBarry Smith 887ad0619ddSBarry Smith Output Parameter: 888b00a9115SJed Brown . result - memory allocated, sized to match pointer type 889ad0619ddSBarry Smith 890ad0619ddSBarry Smith Level: developer 891ad0619ddSBarry Smith 892db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscMalloc()`, `PetscNew()`, `PetscLogObjectMemory()`, `PetscCalloc1()`, `PetscMalloc1()` 893ad0619ddSBarry Smith 894ad0619ddSBarry Smith M*/ 895d12f57a0SLisandro Dalcin #define PetscNewLog(o, b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o, sizeof(**(b)))) 896d382aafbSBarry Smith 897d382aafbSBarry Smith /*MC 898d382aafbSBarry Smith PetscFree - Frees memory 899d382aafbSBarry Smith 900eca87e8dSBarry Smith Synopsis: 901aaa7dc30SBarry Smith #include <petscsys.h> 902eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 903eca87e8dSBarry Smith 904eca87e8dSBarry Smith Not Collective 905eca87e8dSBarry Smith 906d382aafbSBarry Smith Input Parameter: 9077f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 908d382aafbSBarry Smith 909d382aafbSBarry Smith Level: beginner 910d382aafbSBarry Smith 91149d7da52SJed Brown Notes: 91287497f52SBarry Smith Do not free memory obtained with `PetscMalloc2()`, `PetscCalloc2()` etc, they must be freed with `PetscFree2()` etc. 913390e1bf2SBarry Smith 91487497f52SBarry Smith It is safe to call `PetscFree()` on a NULL pointer. 915d382aafbSBarry Smith 916db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscNewLog()`, `PetscMalloc1()`, `PetscCalloc1()` 917d382aafbSBarry Smith 918d382aafbSBarry Smith M*/ 919ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void *)(a), __LINE__, PETSC_FUNCTION_NAME, __FILE__) || ((a) = NULL, 0)) 920d382aafbSBarry Smith 921d382aafbSBarry Smith /*MC 92287497f52SBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with `PetscMalloc2()` 923d382aafbSBarry Smith 924eca87e8dSBarry Smith Synopsis: 925aaa7dc30SBarry Smith #include <petscsys.h> 926eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 927eca87e8dSBarry Smith 928eca87e8dSBarry Smith Not Collective 929eca87e8dSBarry Smith 930e28ce29aSPatrick Sanan Input Parameters: 931d382aafbSBarry Smith + memory1 - memory to free 932d382aafbSBarry Smith - memory2 - 2nd memory to free 933d382aafbSBarry Smith 934d382aafbSBarry Smith Level: developer 935d382aafbSBarry Smith 93695452b02SPatrick Sanan Notes: 93787497f52SBarry Smith Memory must have been obtained with `PetscMalloc2()` 938d382aafbSBarry Smith 939db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()` 940d382aafbSBarry Smith 941d382aafbSBarry Smith M*/ 942ba282f50SJed Brown #define PetscFree2(m1, m2) PetscFreeA(2, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2)) 943d382aafbSBarry Smith 944d382aafbSBarry Smith /*MC 94587497f52SBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with `PetscMalloc3()` 946d382aafbSBarry Smith 947eca87e8dSBarry Smith Synopsis: 948aaa7dc30SBarry Smith #include <petscsys.h> 949eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 950eca87e8dSBarry Smith 951eca87e8dSBarry Smith Not Collective 952eca87e8dSBarry Smith 953e28ce29aSPatrick Sanan Input Parameters: 954d382aafbSBarry Smith + memory1 - memory to free 955d382aafbSBarry Smith . memory2 - 2nd memory to free 956d382aafbSBarry Smith - memory3 - 3rd memory to free 957d382aafbSBarry Smith 958d382aafbSBarry Smith Level: developer 959d382aafbSBarry Smith 96095452b02SPatrick Sanan Notes: 96187497f52SBarry Smith Memory must have been obtained with `PetscMalloc3()` 962d382aafbSBarry Smith 963db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()` 964d382aafbSBarry Smith 965d382aafbSBarry Smith M*/ 966ba282f50SJed Brown #define PetscFree3(m1, m2, m3) PetscFreeA(3, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3)) 967d382aafbSBarry Smith 968d382aafbSBarry Smith /*MC 96987497f52SBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with `PetscMalloc4()` 970d382aafbSBarry Smith 971eca87e8dSBarry Smith Synopsis: 972aaa7dc30SBarry Smith #include <petscsys.h> 973eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 974eca87e8dSBarry Smith 975eca87e8dSBarry Smith Not Collective 976eca87e8dSBarry Smith 977e28ce29aSPatrick Sanan Input Parameters: 978d382aafbSBarry Smith + m1 - memory to free 979d382aafbSBarry Smith . m2 - 2nd memory to free 980d382aafbSBarry Smith . m3 - 3rd memory to free 981d382aafbSBarry Smith - m4 - 4th memory to free 982d382aafbSBarry Smith 983d382aafbSBarry Smith Level: developer 984d382aafbSBarry Smith 98595452b02SPatrick Sanan Notes: 98687497f52SBarry Smith Memory must have been obtained with `PetscMalloc4()` 987d382aafbSBarry Smith 988db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()` 989d382aafbSBarry Smith 990d382aafbSBarry Smith M*/ 991ba282f50SJed Brown #define PetscFree4(m1, m2, m3, m4) PetscFreeA(4, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4)) 992d382aafbSBarry Smith 993d382aafbSBarry Smith /*MC 99487497f52SBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with `PetscMalloc5()` 995d382aafbSBarry Smith 996eca87e8dSBarry Smith Synopsis: 997aaa7dc30SBarry Smith #include <petscsys.h> 998eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 999eca87e8dSBarry Smith 1000eca87e8dSBarry Smith Not Collective 1001eca87e8dSBarry Smith 1002e28ce29aSPatrick Sanan Input Parameters: 1003d382aafbSBarry Smith + m1 - memory to free 1004d382aafbSBarry Smith . m2 - 2nd memory to free 1005d382aafbSBarry Smith . m3 - 3rd memory to free 1006d382aafbSBarry Smith . m4 - 4th memory to free 1007d382aafbSBarry Smith - m5 - 5th memory to free 1008d382aafbSBarry Smith 1009d382aafbSBarry Smith Level: developer 1010d382aafbSBarry Smith 101195452b02SPatrick Sanan Notes: 101287497f52SBarry Smith Memory must have been obtained with `PetscMalloc5()` 1013d382aafbSBarry Smith 1014db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()` 1015d382aafbSBarry Smith 1016d382aafbSBarry Smith M*/ 1017ba282f50SJed Brown #define PetscFree5(m1, m2, m3, m4, m5) PetscFreeA(5, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5)) 1018d382aafbSBarry Smith 1019d382aafbSBarry Smith /*MC 102087497f52SBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with `PetscMalloc6()` 1021d382aafbSBarry Smith 1022eca87e8dSBarry Smith Synopsis: 1023aaa7dc30SBarry Smith #include <petscsys.h> 1024eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1025eca87e8dSBarry Smith 1026eca87e8dSBarry Smith Not Collective 1027eca87e8dSBarry Smith 1028e28ce29aSPatrick Sanan Input Parameters: 1029d382aafbSBarry Smith + m1 - memory to free 1030d382aafbSBarry Smith . m2 - 2nd memory to free 1031d382aafbSBarry Smith . m3 - 3rd memory to free 1032d382aafbSBarry Smith . m4 - 4th memory to free 1033d382aafbSBarry Smith . m5 - 5th memory to free 1034d382aafbSBarry Smith - m6 - 6th memory to free 1035d382aafbSBarry Smith 1036d382aafbSBarry Smith Level: developer 1037d382aafbSBarry Smith 103895452b02SPatrick Sanan Notes: 103987497f52SBarry Smith Memory must have been obtained with `PetscMalloc6()` 1040d382aafbSBarry Smith 1041db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()` 1042d382aafbSBarry Smith 1043d382aafbSBarry Smith M*/ 1044ba282f50SJed Brown #define PetscFree6(m1, m2, m3, m4, m5, m6) PetscFreeA(6, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6)) 1045d382aafbSBarry Smith 1046d382aafbSBarry Smith /*MC 104787497f52SBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with `PetscMalloc7()` 1048d382aafbSBarry Smith 1049eca87e8dSBarry Smith Synopsis: 1050aaa7dc30SBarry Smith #include <petscsys.h> 1051eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1052eca87e8dSBarry Smith 1053eca87e8dSBarry Smith Not Collective 1054eca87e8dSBarry Smith 1055e28ce29aSPatrick Sanan Input Parameters: 1056d382aafbSBarry Smith + m1 - memory to free 1057d382aafbSBarry Smith . m2 - 2nd memory to free 1058d382aafbSBarry Smith . m3 - 3rd memory to free 1059d382aafbSBarry Smith . m4 - 4th memory to free 1060d382aafbSBarry Smith . m5 - 5th memory to free 1061d382aafbSBarry Smith . m6 - 6th memory to free 1062d382aafbSBarry Smith - m7 - 7th memory to free 1063d382aafbSBarry Smith 1064d382aafbSBarry Smith Level: developer 1065d382aafbSBarry Smith 106695452b02SPatrick Sanan Notes: 106787497f52SBarry Smith Memory must have been obtained with `PetscMalloc7()` 1068d382aafbSBarry Smith 1069db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`, 1070db781477SPatrick Sanan `PetscMalloc7()` 1071d382aafbSBarry Smith 1072d382aafbSBarry Smith M*/ 1073ba282f50SJed Brown #define PetscFree7(m1, m2, m3, m4, m5, m6, m7) PetscFreeA(7, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6), &(m7)) 1074d382aafbSBarry Smith 1075ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int, PetscBool, int, const char *, const char *, size_t, void *, ...); 1076ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int, int, const char *, const char *, void *, ...); 1077071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t, PetscBool, int, const char[], const char[], void **); 1078efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void *, int, const char[], const char[]); 10793221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t, int, const char[], const char[], void **); 1080ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 108192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t, PetscBool, int, const char[], const char[], void **), PetscErrorCode (*)(void *, int, const char[], const char[]), PetscErrorCode (*)(size_t, int, const char[], const char[], void **)); 1082014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1083d382aafbSBarry Smith 1084d382aafbSBarry Smith /* 1085c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1086c1706be6SHong Zhang */ 1087c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1088c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 108931f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 109031f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 109131f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 109231f06eaaSHong Zhang #endif 109359af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 109459af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 109559af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 109659af0bd3SScott Kruger #endif 109759af0bd3SScott Kruger 1098a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 109936763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1100a5057860SBarry Smith 1101a5057860SBarry Smith /* 110266d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1103d382aafbSBarry Smith */ 1104014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 110592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1106014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1107014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1108e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1109e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int, PetscLogDouble *); 111092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool, PetscBool); 111192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool *, PetscBool *, PetscBool *); 1112efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int, const char[], const char[]); 111392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 111492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool *); 1115608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1116608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool *); 1117d382aafbSBarry Smith 11186a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1119014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType, MPI_Datatype *); 1120014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype, PetscDataType *); 1121014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType, size_t *); 11228e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char *, PetscDataType *, PetscBool *); 1123d382aafbSBarry Smith 1124d382aafbSBarry Smith /* 1125d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1126d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1127d382aafbSBarry Smith functionality and/or error checking. 1128d382aafbSBarry Smith */ 1129014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void *, const void *, size_t, PetscBool *); 1130014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[], size_t *); 1131d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[], char, int *, char ***); 1132014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int, char **); 1133014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[], const char[], PetscBool *); 1134014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[], const char[], PetscBool *); 1135014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[], const char[], PetscBool *); 1136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[], const char[], size_t, PetscBool *); 1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[], const char[]); 1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[], const char[]); 1139a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[], const char[], size_t); 1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[], const char[], size_t); 1141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[], char, char *[]); 1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11432f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[], char, char *[]); 1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[], const char[], char *[]); 1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[], const char[], char *[]); 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[], const char[], PetscBool *); 11482c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[], const char[], PetscBool *); 1149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[], const char *const *, PetscInt *); 1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[], char *[]); 115147340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const *, char ***); 11526fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char ***); 11536991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt, const char *const *, char ***); 11546991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt, char ***); 1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm, const char[], char[], size_t); 1156d382aafbSBarry Smith 1157573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[], const char[], PetscBool *); 1158573b0fb4SBarry Smith 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[], const char, PetscToken *); 1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken, char *[]); 1161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken *); 1162d382aafbSBarry Smith 1163e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[], const char[], char, PetscBool *); 116480b92c66SBarry Smith PETSC_EXTERN const char *PetscBasename(const char[]); 1165a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt, const char *const *, const char *, PetscInt *, PetscBool *); 1166a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const *, const char *, PetscEnum *, PetscBool *); 1167a53986e1SJed Brown 1168d382aafbSBarry Smith /* 1169d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1170d382aafbSBarry Smith */ 1171367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1172570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1173de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1174014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1175014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1176d9822059SBarry Smith #else 1177de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1178d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1179d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1180d9822059SBarry Smith #endif 11819e517322SPierre Jolivet #if defined(PETSC_HAVE_REAL___FLOAT128) || defined(PETSC_HAVE_REAL___FP16) 1182613bf2b2SPierre Jolivet /*MC 11839e517322SPierre Jolivet MPIU_SUM___FP16___FLOAT128 - MPI_Op that acts as a replacement for MPI_SUM with 11849e517322SPierre Jolivet custom MPI_Datatype `MPIU___FLOAT128`, `MPIU___COMPLEX128`, and `MPIU___FP16`. 1185613bf2b2SPierre Jolivet 1186613bf2b2SPierre Jolivet Level: advanced 1187613bf2b2SPierre Jolivet 1188613bf2b2SPierre Jolivet Developer Note: 1189613bf2b2SPierre Jolivet This should be unified with `MPIU_SUM` 1190613bf2b2SPierre Jolivet 1191613bf2b2SPierre Jolivet .seealso: `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 1192613bf2b2SPierre Jolivet M*/ 11939e517322SPierre Jolivet PETSC_EXTERN MPI_Op MPIU_SUM___FP16___FLOAT128; 1194613bf2b2SPierre Jolivet #endif 1195014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 1196d382aafbSBarry Smith 1197*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Send(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 1198*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Recv(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 1199eb3f98d2SBarry Smith 120095c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1201d6a4318aSJed Brown 1202639ff905SBarry Smith /* 1203639ff905SBarry Smith Defines PETSc error handling. 1204639ff905SBarry Smith */ 1205639ff905SBarry Smith #include <petscerror.h> 1206d382aafbSBarry Smith 1207660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabled; /* code is running in the PETSc test harness CI */ 1208660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabledPortableErrorOutput; /* error output is stripped to ensure portability of error messages across systems */ 1209660278c0SBarry Smith PETSC_EXTERN const char *PetscCIFilename(const char *); 1210660278c0SBarry Smith PETSC_EXTERN int PetscCILinenumber(int); 1211660278c0SBarry Smith 12120700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1213014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1214014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1215014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[], PetscClassId *); 121681256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject, PetscObjectId *); 121781256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject, PetscObjectId, PetscBool *); 121881256985SMatthew G. Knepley 1219d382aafbSBarry Smith /* 1220d382aafbSBarry Smith Routines that get memory usage information from the OS 1221d382aafbSBarry Smith */ 1222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1225b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1226d382aafbSBarry Smith 1227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1228d382aafbSBarry Smith 1229d382aafbSBarry Smith /* 1230d382aafbSBarry Smith Initialization of PETSc 1231d382aafbSBarry Smith */ 1232014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int *, char ***, const char[], const char[]); 1233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int, char **, const char[], const char[]); 1234014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int *, char ***); 1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1242d382aafbSBarry Smith 1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1244607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1245d382aafbSBarry Smith 1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[], const char[]); 1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject, const char[]); 1250d382aafbSBarry Smith 1251a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscBool *); 1252a50e088cSMatthew G. Knepley 1253d382aafbSBarry Smith /* 1254d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12552981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1256d382aafbSBarry Smith */ 1257638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1258638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1259638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1260d382aafbSBarry Smith 1261d382aafbSBarry Smith /* 1262d382aafbSBarry Smith Functions that can act on any PETSc object. 1263d382aafbSBarry Smith */ 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject *); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject, MPI_Comm *); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject, PetscClassId *); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject, const char *[]); 1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject, const char *[]); 1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject, const char[]); 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject, const char *[]); 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject, PetscInt); 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject, PetscInt *); 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject, PetscObject, PetscInt); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject, PetscInt *); 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject, PetscMPIInt *); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject, const char[], PetscObject); 1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject, const char[]); 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject, const char[], PetscObject *); 1281bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject, const char[], void (*)(void)); 1282bdf89e91SBarry Smith #define PetscObjectComposeFunction(a, b, d) PetscObjectComposeFunction_Private(a, b, (PetscVoidFunction)(d)) 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 12850eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 12860eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject, PetscObject); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm, PetscMPIInt *); 1288d382aafbSBarry Smith 1289665c2dedSJed Brown #include <petscviewertypes.h> 1290639ff905SBarry Smith #include <petscoptions.h> 1291639ff905SBarry Smith 1292608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer, PetscBool, PetscLogDouble); 1293608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool *); 1294608c71bfSMatthew G. Knepley 12950633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm, PetscInt, PetscObject *, PetscInt *, PetscInt *); 12960633abcbSJed Brown 1297c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer, const char[]); 1298dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject, PetscViewer); 1299639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject, PetscViewer); 13000005d66cSJed Brown #define PetscObjectQueryFunction(obj, name, fptr) PetscObjectQueryFunction_Private((obj), (name), (PetscVoidFunction *)(fptr)) 13010005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject, const char[], void (**)(void)); 1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject, const char[]); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject, const char[]); 1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject, const char[]); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject, const char *[]); 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject, const char[]); 1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1309685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject, PetscObject, const char[]); 1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject, const char[], PetscBool *); 1312013e2dc7SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectObjectTypeCompare(PetscObject, PetscObject, PetscBool *); 13134099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject, const char[], PetscBool *); 1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1315b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1318d382aafbSBarry Smith 1319e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13207aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1321e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1322e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject, PetscBool); 1323e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1324e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1325e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1326e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1327e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1328e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1329e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 133015681b3cSBarry Smith 1331ec7429eaSBarry Smith #else 13327aab2a10SBarry Smith #define PetscSAWsBlock() 0 1333e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1334e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj, flg) 0 1335e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1336e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1337e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1338e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1339e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1340e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1341e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 134215681b3cSBarry Smith 1343ec7429eaSBarry Smith #endif 1344b90c6cbeSBarry Smith 134582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[], PetscDLMode, PetscDLHandle *); 134682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 134782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle, const char[], void **); 1348258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1349258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1350258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1351258ec3d2SMatthew G. Knepley #endif 13527d5d4d99SBarry Smith 13535fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1354a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void *, PetscStack **); 13555fe58b6fSBarry Smith #endif 13567eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE *, PetscBool); 1357a64a8e02SBarry Smith 1358140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList *); 1359140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList, const char[], PetscObject *); 1360140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList, PetscObject, char **, PetscBool *); 1361140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *, const char[], PetscObject); 1362140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *, const char[]); 1363140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList, PetscObjectList *); 1364d382aafbSBarry Smith 1365d382aafbSBarry Smith /* 1366503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1367d382aafbSBarry Smith link libraries that will be loaded as needed. 1368d382aafbSBarry Smith */ 1369a240a19fSJed Brown 1370a240a19fSJed Brown #define PetscFunctionListAdd(list, name, fptr) PetscFunctionListAdd_Private((list), (name), (PetscVoidFunction)(fptr)) 1371a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList *, const char[], void (*)(void)); 1372140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList *); 13730e6b6b59SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFunctionListClear(PetscFunctionList); 13741c9cd337SJed Brown #define PetscFunctionListFind(list, name, fptr) PetscFunctionListFind_Private((list), (name), (PetscVoidFunction *)(fptr)) 13751c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList, const char[], void (**)(void)); 137644ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm, FILE *, const char[], const char[], const char[], const char[], PetscFunctionList, const char[], const char[]); 1377140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList, PetscFunctionList *); 1378140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList, PetscViewer); 1379140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList, const char ***, int *); 13802e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintNonEmpty(PetscFunctionList); 13812e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintAll(void); 1382d382aafbSBarry Smith 1383014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm, PetscDLLibrary *, const char[]); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm, PetscDLLibrary *, const char[]); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm, PetscDLLibrary *, const char[], const char[], void **); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm, const char[], char *, size_t, PetscBool *); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm, const char[], PetscDLLibrary *); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1391d382aafbSBarry Smith 1392d382aafbSBarry Smith /* 1393d382aafbSBarry Smith Useful utility routines 1394d382aafbSBarry Smith */ 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm, PetscInt *, PetscInt *); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm, PetscInt, PetscInt *, PetscInt *); 1397d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm, PetscInt *, PetscInt *); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm, PetscMPIInt); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm, PetscMPIInt); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE *); 140258b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm, const PetscInt[2], PetscInt[2]); 140358b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm, const PetscReal[2], PetscReal[2]); 1404d382aafbSBarry Smith 140564ac3b0dSPatrick Sanan /*MC 140687497f52SBarry Smith PetscNot - negates a logical type value and returns result as a `PetscBool` 1407503cfb0cSBarry Smith 1408e28ce29aSPatrick Sanan Notes: 1409e28ce29aSPatrick Sanan This is useful in cases like 1410503cfb0cSBarry Smith $ int *a; 1411ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 14121cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 141364ac3b0dSPatrick Sanan 141464ac3b0dSPatrick Sanan Level: beginner 141564ac3b0dSPatrick Sanan 1416db781477SPatrick Sanan .seealso `:` `PetscBool`, `PETSC_TRUE`, `PETSC_FALSE` 141764ac3b0dSPatrick Sanan M*/ 1418d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1419503cfb0cSBarry Smith 1420d382aafbSBarry Smith /*MC 1421d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1422d382aafbSBarry Smith 1423d382aafbSBarry Smith Synopsis: 1424aaa7dc30SBarry Smith #include <petscsys.h> 1425659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1426d382aafbSBarry Smith 1427659f7ba0SBarry Smith Collective on comm 1428eca87e8dSBarry Smith 1429d382aafbSBarry Smith Input Parameters: 1430659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1431d382aafbSBarry Smith . format - the usual printf() format string 1432659f7ba0SBarry Smith - args - arguments to be printed 1433d382aafbSBarry Smith 1434d382aafbSBarry Smith Level: developer 1435d382aafbSBarry Smith 1436d382aafbSBarry Smith Fortran Note: 1437d382aafbSBarry Smith This routine is not supported in Fortran. 1438d382aafbSBarry Smith 1439659f7ba0SBarry Smith Note: 1440659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1441659f7ba0SBarry Smith 1442659f7ba0SBarry Smith To use, write your own function, for example, 1443659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1444659f7ba0SBarry Smith ${ 1445659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1446659f7ba0SBarry Smith $} 1447659f7ba0SBarry Smith then do the assigment 1448659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 144987497f52SBarry Smith You can do the assignment before `PetscInitialize()`. 1450659f7ba0SBarry Smith 145187497f52SBarry Smith The default routine used is called `PetscHelpPrintfDefault()`. 1452d382aafbSBarry Smith 1453db781477SPatrick Sanan .seealso: `PetscFPrintf()`, `PetscSynchronizedPrintf()`, `PetscErrorPrintf()` 1454d382aafbSBarry Smith M*/ 14553ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1456d382aafbSBarry Smith 1457fcfd50ebSBarry Smith /* 1458fcfd50ebSBarry Smith Defines PETSc profiling. 1459fcfd50ebSBarry Smith */ 14602c8e378dSBarry Smith #include <petsclog.h> 1461fcfd50ebSBarry Smith 1462fcfd50ebSBarry Smith /* 1463fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1464fcfd50ebSBarry Smith */ 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[], char[]); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm, const char[], const char[], FILE **); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm, FILE *); 14683ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14693ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14703ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char *, size_t, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14713ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char *, size_t, const char[], size_t *, ...) PETSC_ATTRIBUTE_FORMAT(3, 5); 14721b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[], size_t, const char *, PetscInt, const PetscReal[]); 1473fcfd50ebSBarry Smith 14743ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14753ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14763ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1477d382aafbSBarry Smith 1478d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char *, size_t *); 1479d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char *, char *); 1480d781fa04SBarry Smith 1481d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm, const char[], const char[], const char[], FILE **); 1483016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm, FILE *); 148474ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1485d382aafbSBarry Smith #endif 1486d382aafbSBarry Smith 14873ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14883ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14890ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm, FILE *); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm, FILE *, size_t, char[]); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm, const char[], const char[], FILE **); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm, const char[], const char[], FILE **); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char *[]); 1494d382aafbSBarry Smith 1495014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer, void **); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer, void *); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer *); 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm, PetscContainer *); 1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void *)); 1501b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void *); 1502d382aafbSBarry Smith 1503d382aafbSBarry Smith /* 1504d382aafbSBarry Smith For use in debuggers 1505d382aafbSBarry Smith */ 1506014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1507014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt, const PetscInt[], PetscViewer); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt, const PetscReal[], PetscViewer); 1510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt, const PetscScalar[], PetscViewer); 1511d382aafbSBarry Smith 1512a663daf8SBarry Smith #include <stddef.h> 1513a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1514d382aafbSBarry Smith #include <stdlib.h> 15156c7e564aSBarry Smith 15164a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1517d382aafbSBarry Smith #include <xmmintrin.h> 1518d382aafbSBarry Smith #endif 1519d382aafbSBarry Smith 1520d382aafbSBarry Smith /*@C 1521580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1522580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 152387497f52SBarry Smith take place correctly. Use `PetscMemcpy()` if the locations do not overlap 1524580bdb30SBarry Smith 1525580bdb30SBarry Smith Not Collective 1526580bdb30SBarry Smith 1527580bdb30SBarry Smith Input Parameters: 1528580bdb30SBarry Smith + b - pointer to initial memory space 1529580bdb30SBarry Smith . a - pointer to copy space 1530580bdb30SBarry Smith - n - length (in bytes) of space to copy 1531580bdb30SBarry Smith 1532580bdb30SBarry Smith Level: intermediate 1533580bdb30SBarry Smith 153487497f52SBarry Smith Notes: 153587497f52SBarry Smith `PetscArraymove()` is preferred 1536580bdb30SBarry Smith 153787497f52SBarry Smith This routine is analogous to `memmove()`. 153887497f52SBarry Smith 153987497f52SBarry Smith Developers Note: 154087497f52SBarry Smith This is inlined for performance 1541580bdb30SBarry Smith 1542db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscStrallocpy()`, 1543db781477SPatrick Sanan `PetscArraymove()` 1544580bdb30SBarry Smith @*/ 15459371c9d4SSatish Balay static inline PetscErrorCode PetscMemmove(void *a, const void *b, size_t n) { 1546580bdb30SBarry Smith PetscFunctionBegin; 15479a202e32SJacob Faibussowitsch if (n > 0) { 15482c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy to null pointer"); 15492c71b3e2SJacob Faibussowitsch PetscCheck(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy from a null pointer"); 15509a202e32SJacob Faibussowitsch } 1551580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1552580bdb30SBarry Smith if (a < b) { 1553580bdb30SBarry Smith if (a <= b - n) memcpy(a, b, n); 1554580bdb30SBarry Smith else { 1555580bdb30SBarry Smith memcpy(a, b, (int)(b - a)); 1556580bdb30SBarry Smith PetscMemmove(b, b + (int)(b - a), n - (int)(b - a)); 1557580bdb30SBarry Smith } 1558580bdb30SBarry Smith } else { 1559580bdb30SBarry Smith if (b <= a - n) memcpy(a, b, n); 1560580bdb30SBarry Smith else { 1561580bdb30SBarry Smith memcpy(b + n, b + (n - (int)(a - b)), (int)(a - b)); 1562580bdb30SBarry Smith PetscMemmove(a, b, n - (int)(a - b)); 1563580bdb30SBarry Smith } 1564580bdb30SBarry Smith } 1565580bdb30SBarry Smith #else 1566580bdb30SBarry Smith memmove((char *)(a), (char *)(b), n); 1567580bdb30SBarry Smith #endif 1568580bdb30SBarry Smith PetscFunctionReturn(0); 1569580bdb30SBarry Smith } 1570580bdb30SBarry Smith 1571d382aafbSBarry Smith /*@C 1572d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1573d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 157487497f52SBarry Smith `PetscMemmove()` in that case. 1575d382aafbSBarry Smith 1576d382aafbSBarry Smith Not Collective 1577d382aafbSBarry Smith 1578d382aafbSBarry Smith Input Parameters: 1579d382aafbSBarry Smith + b - pointer to initial memory space 1580d382aafbSBarry Smith - n - length (in bytes) of space to copy 1581d382aafbSBarry Smith 1582d382aafbSBarry Smith Output Parameter: 1583d382aafbSBarry Smith . a - pointer to copy space 1584d382aafbSBarry Smith 1585d382aafbSBarry Smith Level: intermediate 1586d382aafbSBarry Smith 1587d382aafbSBarry Smith Compile Option: 158887497f52SBarry Smith `PETSC_PREFER_DCOPY_FOR_MEMCPY` will cause the BLAS dcopy() routine to be used 1589d382aafbSBarry Smith for memory copies on double precision values. 159087497f52SBarry Smith `PETSC_PREFER_COPY_FOR_MEMCPY` will cause C code to be used 1591d382aafbSBarry Smith for memory copies on double precision values. 159287497f52SBarry Smith `PETSC_PREFER_FORTRAN_FORMEMCPY` will cause Fortran code to be used 1593d382aafbSBarry Smith for memory copies on double precision values. 1594d382aafbSBarry Smith 159587497f52SBarry Smith Notes: 159687497f52SBarry Smith Prefer `PetscArraycpy()` 159787497f52SBarry Smith 159887497f52SBarry Smith This routine is analogous to `memcpy()`. 159987497f52SBarry Smith 16001fd49c25SBarry Smith Not available from Fortran 16011fd49c25SBarry Smith 160287497f52SBarry Smith Developer Note: 160387497f52SBarry Smith This is inlined for fastest performance 1604f5f57ec0SBarry Smith 1605db781477SPatrick Sanan .seealso: `PetscMemzero()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1606d382aafbSBarry Smith 1607d382aafbSBarry Smith @*/ 16089371c9d4SSatish Balay static inline PetscErrorCode PetscMemcpy(void *a, const void *b, size_t n) { 1609d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1610c5e4d11fSDmitry Karpeev size_t al = (size_t)a, bl = (size_t)b; 1611c5e4d11fSDmitry Karpeev size_t nl = (size_t)n; 1612a7e36092SMatthew G Knepley PetscFunctionBegin; 16139a202e32SJacob Faibussowitsch if (n > 0) { 16142c71b3e2SJacob Faibussowitsch PetscCheck(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy from a null pointer"); 16152c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy to a null pointer"); 16169a202e32SJacob Faibussowitsch } 1617a7e36092SMatthew G Knepley #else 1618d382aafbSBarry Smith PetscFunctionBegin; 1619a7e36092SMatthew G Knepley #endif 1620a47a537aSLisandro Dalcin if (a != b && n > 0) { 1621d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16222c71b3e2SJacob Faibussowitsch PetscCheck(!((al > bl && (al - bl) < nl) || (bl - al) < nl), PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Memory regions overlap: either use PetscMemmov()\n\ 1623d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 16249371c9d4SSatish Balay Length (bytes) %zu first address %zu second address %zu", 16259371c9d4SSatish Balay nl, al, bl); 1626d382aafbSBarry Smith #endif 1627d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1628c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1629d382aafbSBarry Smith size_t len = n / sizeof(PetscScalar); 1630d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1631c5df96a5SBarry Smith PetscBLASInt one = 1, blen; 16329566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(len, &blen)); 1633792fecdfSBarry Smith PetscCallBLAS("BLAScopy", BLAScopy_(&blen, (PetscScalar *)b, &one, (PetscScalar *)a, &one)); 1634d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1635d382aafbSBarry Smith fortrancopy_(&len, (PetscScalar *)b, (PetscScalar *)a); 1636d382aafbSBarry Smith #else 1637d382aafbSBarry Smith PetscScalar *x = (PetscScalar *)b, *y = (PetscScalar *)a; 16385f80ce2aSJacob Faibussowitsch for (size_t i = 0; i < len; i++) y[i] = x[i]; 1639d382aafbSBarry Smith #endif 1640d382aafbSBarry Smith } else { 1641d382aafbSBarry Smith memcpy((char *)(a), (char *)(b), n); 1642d382aafbSBarry Smith } 1643d382aafbSBarry Smith #else 1644d382aafbSBarry Smith memcpy((char *)(a), (char *)(b), n); 1645d382aafbSBarry Smith #endif 1646d382aafbSBarry Smith } 1647d382aafbSBarry Smith PetscFunctionReturn(0); 1648d382aafbSBarry Smith } 1649d382aafbSBarry Smith 1650d382aafbSBarry Smith /*@C 1651d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1652d382aafbSBarry Smith 1653d382aafbSBarry Smith Not Collective 1654d382aafbSBarry Smith 1655d382aafbSBarry Smith Input Parameters: 1656d382aafbSBarry Smith + a - pointer to beginning memory location 1657d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1658d382aafbSBarry Smith 1659d382aafbSBarry Smith Level: intermediate 1660d382aafbSBarry Smith 1661d382aafbSBarry Smith Compile Option: 166287497f52SBarry Smith `PETSC_PREFER_BZERO` - on certain machines (the IBM RS6000) the bzero() routine happens 1663d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1664d382aafbSBarry Smith 166587497f52SBarry Smith Notes: 16661fd49c25SBarry Smith Not available from Fortran 16671fd49c25SBarry Smith 166887497f52SBarry Smith Prefer `PetscArrayzero()` 166987497f52SBarry Smith 167087497f52SBarry Smith Developer Note: 167187497f52SBarry Smith This is inlined for fastest performance 1672503cfb0cSBarry Smith 1673db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1674d382aafbSBarry Smith @*/ 16759371c9d4SSatish Balay static inline PetscErrorCode PetscMemzero(void *a, size_t n) { 1676d382aafbSBarry Smith if (n > 0) { 1677d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16782c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to zero at a null pointer with %zu bytes", n); 1679d382aafbSBarry Smith #endif 1680d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1681d382aafbSBarry Smith if (!(((long)a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1682d382aafbSBarry Smith size_t i, len = n / sizeof(PetscScalar); 1683d382aafbSBarry Smith PetscScalar *x = (PetscScalar *)a; 1684d382aafbSBarry Smith for (i = 0; i < len; i++) x[i] = 0.0; 1685d382aafbSBarry Smith } else { 1686d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1687d382aafbSBarry Smith if (!(((long)a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1688d382aafbSBarry Smith PetscInt len = n / sizeof(PetscScalar); 1689d382aafbSBarry Smith fortranzero_(&len, (PetscScalar *)a); 1690d382aafbSBarry Smith } else { 1691d382aafbSBarry Smith #endif 1692d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1693d382aafbSBarry Smith bzero((char *)a, n); 1694d382aafbSBarry Smith #else 1695d382aafbSBarry Smith memset((char *)a, 0, n); 1696d382aafbSBarry Smith #endif 1697d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1698d382aafbSBarry Smith } 1699d382aafbSBarry Smith #endif 1700d382aafbSBarry Smith } 1701d382aafbSBarry Smith return 0; 1702d382aafbSBarry Smith } 1703d382aafbSBarry Smith 1704d382aafbSBarry Smith /*MC 1705580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1706580bdb30SBarry Smith 1707580bdb30SBarry Smith Synopsis: 1708580bdb30SBarry Smith #include <petscsys.h> 1709580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1710580bdb30SBarry Smith 1711580bdb30SBarry Smith Not Collective 1712580bdb30SBarry Smith 1713580bdb30SBarry Smith Input Parameters: 1714580bdb30SBarry Smith + str1 - First array 1715580bdb30SBarry Smith . str2 - Second array 1716580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1717580bdb30SBarry Smith 1718580bdb30SBarry Smith Output Parameters: 171987497f52SBarry Smith . e - `PETSC_TRUE` if equal else `PETSC_FALSE`. 1720580bdb30SBarry Smith 1721580bdb30SBarry Smith Level: intermediate 1722580bdb30SBarry Smith 172387497f52SBarry Smith Notes: 172487497f52SBarry Smith This routine is a preferred replacement to `PetscMemcmp()` 172587497f52SBarry Smith 1726580bdb30SBarry Smith The arrays must be of the same type 1727580bdb30SBarry Smith 1728db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, 1729db781477SPatrick Sanan `PetscArraymove()` 1730580bdb30SBarry Smith M*/ 17319e2232c7SLisandro Dalcin #define PetscArraycmp(str1, str2, cnt, e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1, str2, (size_t)(cnt) * sizeof(*(str1)), e)) 1732580bdb30SBarry Smith 17338f8f2f0dSBarry Smith /*MC 173487497f52SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use `PetscArraycpy()` when the arrays 1735580bdb30SBarry Smith do not overlap 1736580bdb30SBarry Smith 1737580bdb30SBarry Smith Synopsis: 1738580bdb30SBarry Smith #include <petscsys.h> 1739580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1740580bdb30SBarry Smith 1741580bdb30SBarry Smith Not Collective 1742580bdb30SBarry Smith 1743580bdb30SBarry Smith Input Parameters: 1744580bdb30SBarry Smith + str1 - First array 1745580bdb30SBarry Smith . str2 - Second array 1746580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1747580bdb30SBarry Smith 1748580bdb30SBarry Smith Level: intermediate 1749580bdb30SBarry Smith 175087497f52SBarry Smith Notes: 175187497f52SBarry Smith This routine is a preferred replacement to `PetscMemmove()` 175287497f52SBarry Smith 1753580bdb30SBarry Smith The arrays must be of the same type 1754580bdb30SBarry Smith 1755db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1756580bdb30SBarry Smith M*/ 17579e2232c7SLisandro Dalcin #define PetscArraymove(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1, str2, (size_t)(cnt) * sizeof(*(str1)))) 1758580bdb30SBarry Smith 17598f8f2f0dSBarry Smith /*MC 1760580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1761580bdb30SBarry Smith 1762580bdb30SBarry Smith Synopsis: 1763580bdb30SBarry Smith #include <petscsys.h> 1764580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1765580bdb30SBarry Smith 1766580bdb30SBarry Smith Not Collective 1767580bdb30SBarry Smith 1768580bdb30SBarry Smith Input Parameters: 1769de25709eSStefano Zampini + str1 - First array (destination) 1770de25709eSStefano Zampini . str2 - Second array (source) 1771580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1772580bdb30SBarry Smith 1773580bdb30SBarry Smith Level: intermediate 1774580bdb30SBarry Smith 177587497f52SBarry Smith Notes: 177687497f52SBarry Smith This routine is a preferred replacement to `PetscMemcpy()` 177787497f52SBarry Smith 1778580bdb30SBarry Smith The arrays must be of the same type 1779580bdb30SBarry Smith 1780db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraymove()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1781580bdb30SBarry Smith M*/ 17829e2232c7SLisandro Dalcin #define PetscArraycpy(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1, str2, (size_t)(cnt) * sizeof(*(str1)))) 1783580bdb30SBarry Smith 17848f8f2f0dSBarry Smith /*MC 1785580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1786580bdb30SBarry Smith 1787580bdb30SBarry Smith Synopsis: 1788580bdb30SBarry Smith #include <petscsys.h> 1789580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1790580bdb30SBarry Smith 1791580bdb30SBarry Smith Not Collective 1792580bdb30SBarry Smith 1793580bdb30SBarry Smith Input Parameters: 1794580bdb30SBarry Smith + str1 - array 1795580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1796580bdb30SBarry Smith 1797580bdb30SBarry Smith Level: intermediate 1798580bdb30SBarry Smith 1799580bdb30SBarry Smith Note: 180087497f52SBarry Smith This routine is a preferred replacement to `PetscMemzero()` 1801580bdb30SBarry Smith 1802db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, `PetscArraymove()` 1803580bdb30SBarry Smith M*/ 18049e2232c7SLisandro Dalcin #define PetscArrayzero(str1, cnt) PetscMemzero(str1, (size_t)(cnt) * sizeof(*(str1))) 1805580bdb30SBarry Smith 1806d382aafbSBarry Smith /*MC 1807d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1808d382aafbSBarry Smith 1809eca87e8dSBarry Smith Synopsis: 1810aaa7dc30SBarry Smith #include <petscsys.h> 1811eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1812eca87e8dSBarry Smith 1813d382aafbSBarry Smith Not Collective 1814d382aafbSBarry Smith 1815d382aafbSBarry Smith Input Parameters: 1816d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1817d382aafbSBarry Smith . n - number of elements to fetch 1818d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 181950d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1820d382aafbSBarry Smith 1821d382aafbSBarry Smith Level: developer 1822d382aafbSBarry Smith 1823d382aafbSBarry Smith Notes: 1824d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1825d382aafbSBarry Smith 182650d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 182750d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 182887497f52SBarry Smith + `PETSC_PREFETCH_HINT_NTA` - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 182987497f52SBarry Smith . `PETSC_PREFETCH_HINT_T0` - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 183087497f52SBarry Smith . `PETSC_PREFETCH_HINT_T1` - Fetch to level 2 and higher (not L1). 183187497f52SBarry Smith - `PETSC_PREFETCH_HINT_T2` - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1832d382aafbSBarry Smith 1833d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1834d382aafbSBarry Smith address). 1835d382aafbSBarry Smith 1836d382aafbSBarry Smith M*/ 18379371c9d4SSatish Balay #define PetscPrefetchBlock(a, n, rw, t) \ 18389371c9d4SSatish Balay do { \ 1839d382aafbSBarry Smith const char *_p = (const char *)(a), *_end = (const char *)((a) + (n)); \ 1840d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p, (rw), (t)); \ 1841d382aafbSBarry Smith } while (0) 1842d382aafbSBarry Smith 1843d382aafbSBarry Smith /* 1844d382aafbSBarry Smith Determine if some of the kernel computation routines use 1845d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1846d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1847d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1848e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1849d382aafbSBarry Smith */ 1850d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1851d382aafbSBarry Smith 1852d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1853d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1854d382aafbSBarry Smith #endif 1855d382aafbSBarry Smith 18565a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18575a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1858d382aafbSBarry Smith #endif 1859d382aafbSBarry Smith 1860d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1861d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1862d382aafbSBarry Smith #endif 1863d382aafbSBarry Smith 1864d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1865d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1866d382aafbSBarry Smith #endif 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1869d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1870d382aafbSBarry Smith #endif 1871d382aafbSBarry Smith 1872d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1873d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1874d382aafbSBarry Smith #endif 1875d382aafbSBarry Smith 1876d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1877d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1878d382aafbSBarry Smith #endif 1879d382aafbSBarry Smith 1880d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1881d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1882d382aafbSBarry Smith #endif 1883d382aafbSBarry Smith 1884d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1885d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1886d382aafbSBarry Smith #endif 1887d382aafbSBarry Smith 1888d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1889d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1890d382aafbSBarry Smith #endif 1891d382aafbSBarry Smith 1892d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1893d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1894d382aafbSBarry Smith #endif 1895d382aafbSBarry Smith 1896d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1897d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1898d382aafbSBarry Smith #endif 1899d382aafbSBarry Smith 1900d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1901d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1902d382aafbSBarry Smith #endif 1903d382aafbSBarry Smith 1904d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1905d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1906d382aafbSBarry Smith #endif 1907d382aafbSBarry Smith 1908d382aafbSBarry Smith #endif 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith /* 1911d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1912d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1913d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1914d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1915d382aafbSBarry Smith ugly extern "C" {} wrappers. 1916d382aafbSBarry Smith */ 1917d382aafbSBarry Smith #if defined(__cplusplus) 1918d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1919d382aafbSBarry Smith #define EXTERN_C_END } 1920d382aafbSBarry Smith #else 1921d382aafbSBarry Smith #define EXTERN_C_BEGIN 1922d382aafbSBarry Smith #define EXTERN_C_END 1923d382aafbSBarry Smith #endif 1924d382aafbSBarry Smith 1925d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1926d382aafbSBarry Smith 1927d382aafbSBarry Smith /*MC 1928d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1929d382aafbSBarry Smith communication 1930d382aafbSBarry Smith 1931d382aafbSBarry Smith Level: beginner 1932d382aafbSBarry Smith 1933d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1934d382aafbSBarry Smith 1935db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`, `PETSC_COMM_SELF` 1936d382aafbSBarry Smith M*/ 1937d382aafbSBarry Smith 1938d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1939*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 1940*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 1941*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 1942*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 1943*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 1944*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 1945d382aafbSBarry Smith #endif 1946d382aafbSBarry Smith 1947d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1948d382aafbSBarry Smith 1949d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1950d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1951d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1952d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1953d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1954d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1955eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 1956d382aafbSBarry Smith 195761b0d812SBarry Smith /*@C 195887497f52SBarry Smith PetscIntCast - casts a `PetscInt64` (which is 64 bits in size) to a `PetscInt` (which may be 32 bits in size), generates an 195987497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1960c73702f5SBarry Smith 1961c73702f5SBarry Smith Not Collective 1962c73702f5SBarry Smith 1963c73702f5SBarry Smith Input Parameter: 196487497f52SBarry Smith . a - the `PetscInt64` value 1965c73702f5SBarry Smith 1966c73702f5SBarry Smith Output Parameter: 196787497f52SBarry Smith . b - the resulting `PetscInt` value 1968c73702f5SBarry Smith 1969c73702f5SBarry Smith Level: advanced 1970c73702f5SBarry Smith 197187497f52SBarry Smith Notes: 197287497f52SBarry Smith If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make `PetscInt` use 64 bit ints 1973c73702f5SBarry Smith 1974c73702f5SBarry Smith Not available from Fortran 1975c73702f5SBarry Smith 1976db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()` 1977c73702f5SBarry Smith @*/ 19789371c9d4SSatish Balay static inline PetscErrorCode PetscIntCast(PetscInt64 a, PetscInt *b) { 1979c73702f5SBarry Smith PetscFunctionBegin; 1980c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 19813ca90d2dSJacob Faibussowitsch if (a > PETSC_MAX_INT) { 19823ca90d2dSJacob Faibussowitsch *b = 0; 198398921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 19843ca90d2dSJacob Faibussowitsch } 1985c73702f5SBarry Smith #endif 1986c73702f5SBarry Smith *b = (PetscInt)(a); 1987c73702f5SBarry Smith PetscFunctionReturn(0); 1988c73702f5SBarry Smith } 1989c73702f5SBarry Smith 1990c73702f5SBarry Smith /*@C 199187497f52SBarry Smith PetscCountCast - casts a `PetscCount` to a `PetscInt` (which may be 32 bits in size), generates an 199287497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1993981bb840SJunchao Zhang 1994981bb840SJunchao Zhang Not Collective 1995981bb840SJunchao Zhang 1996981bb840SJunchao Zhang Input Parameter: 199787497f52SBarry Smith . a - the `PetscCount` value 1998981bb840SJunchao Zhang 1999981bb840SJunchao Zhang Output Parameter: 200087497f52SBarry Smith . b - the resulting `PetscInt` value 2001981bb840SJunchao Zhang 2002981bb840SJunchao Zhang Level: advanced 2003981bb840SJunchao Zhang 2004981bb840SJunchao Zhang Notes: 2005981bb840SJunchao Zhang If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2006981bb840SJunchao Zhang 2007981bb840SJunchao Zhang Not available from Fortran 2008981bb840SJunchao Zhang 2009db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`, `PetscIntCast()` 2010981bb840SJunchao Zhang @*/ 20119371c9d4SSatish Balay static inline PetscErrorCode PetscCountCast(PetscCount a, PetscInt *b) { 2012981bb840SJunchao Zhang PetscFunctionBegin; 2013981bb840SJunchao Zhang if (sizeof(PetscCount) > sizeof(PetscInt) && a > PETSC_MAX_INT) { 2014981bb840SJunchao Zhang *b = 0; 2015981bb840SJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 2016981bb840SJunchao Zhang } 2017981bb840SJunchao Zhang *b = (PetscInt)(a); 2018981bb840SJunchao Zhang PetscFunctionReturn(0); 2019981bb840SJunchao Zhang } 2020981bb840SJunchao Zhang 2021981bb840SJunchao Zhang /*@C 202287497f52SBarry Smith PetscBLASIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscBLASInt` (which may be 32 bits in size), generates an 202387497f52SBarry Smith error if the `PetscBLASInt` is not large enough to hold the number. 202461b0d812SBarry Smith 202561b0d812SBarry Smith Not Collective 202661b0d812SBarry Smith 202761b0d812SBarry Smith Input Parameter: 202887497f52SBarry Smith . a - the `PetscInt` value 202961b0d812SBarry Smith 203061b0d812SBarry Smith Output Parameter: 203187497f52SBarry Smith . b - the resulting `PetscBLASInt` value 203261b0d812SBarry Smith 203361b0d812SBarry Smith Level: advanced 203461b0d812SBarry Smith 20350bc7d38cSBarry Smith Notes: 20361fd49c25SBarry Smith Not available from Fortran 203787497f52SBarry Smith 2038f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 20391fd49c25SBarry Smith 2040db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscIntCast()`, `PetscCountCast()` 204161b0d812SBarry Smith @*/ 20429371c9d4SSatish Balay static inline PetscErrorCode PetscBLASIntCast(PetscInt a, PetscBLASInt *b) { 2043c5df96a5SBarry Smith PetscFunctionBegin; 204454c59aa7SJacob Faibussowitsch *b = 0; 204554c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) { 204654c59aa7SJacob Faibussowitsch PetscCheck(a <= PETSC_BLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running", a); 204754c59aa7SJacob Faibussowitsch } 204854c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to BLAS/LAPACK routine"); 2049c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2050c5df96a5SBarry Smith PetscFunctionReturn(0); 2051c5df96a5SBarry Smith } 2052c5df96a5SBarry Smith 205361b0d812SBarry Smith /*@C 205487497f52SBarry Smith PetscCuBLASIntCast - like `PetscBLASIntCast()`, but for `PetscCuBLASInt`. 2055eee0c0a6SToby Isaac 2056eee0c0a6SToby Isaac Not Collective 2057eee0c0a6SToby Isaac 2058eee0c0a6SToby Isaac Input Parameter: 205987497f52SBarry Smith . a - the `PetscInt` value 2060eee0c0a6SToby Isaac 2061eee0c0a6SToby Isaac Output Parameter: 206287497f52SBarry Smith . b - the resulting `PetscCuBLASInt` value 2063eee0c0a6SToby Isaac 2064eee0c0a6SToby Isaac Level: advanced 2065eee0c0a6SToby Isaac 2066eee0c0a6SToby Isaac Notes: 2067eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2068eee0c0a6SToby Isaac 2069db781477SPatrick Sanan .seealso: `PetscCuBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 2070eee0c0a6SToby Isaac @*/ 20719371c9d4SSatish Balay static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a, PetscCuBLASInt *b) { 2072eee0c0a6SToby Isaac PetscFunctionBegin; 207354c59aa7SJacob Faibussowitsch *b = 0; 207454c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_CUBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32 bit integers.", a); 207554c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to cuBLAS routine"); 2076eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2077eee0c0a6SToby Isaac PetscFunctionReturn(0); 2078eee0c0a6SToby Isaac } 2079eee0c0a6SToby Isaac 2080eee0c0a6SToby Isaac /*@C 208187497f52SBarry Smith PetscMPIIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscMPIInt` (which may be 32 bits in size), generates an 208287497f52SBarry Smith error if the `PetscMPIInt` is not large enough to hold the number. 208361b0d812SBarry Smith 208461b0d812SBarry Smith Not Collective 208561b0d812SBarry Smith 208661b0d812SBarry Smith Input Parameter: 208787497f52SBarry Smith . a - the `PetscInt` value 208861b0d812SBarry Smith 208961b0d812SBarry Smith Output Parameter: 209087497f52SBarry Smith . b - the resulting `PetscMPIInt` value 209161b0d812SBarry Smith 209261b0d812SBarry Smith Level: advanced 209361b0d812SBarry Smith 20941fd49c25SBarry Smith Not available from Fortran 20951fd49c25SBarry Smith 2096db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntCast()` 209761b0d812SBarry Smith @*/ 20989371c9d4SSatish Balay static inline PetscErrorCode PetscMPIIntCast(PetscInt a, PetscMPIInt *b) { 20994dc2109aSBarry Smith PetscFunctionBegin; 210054c59aa7SJacob Faibussowitsch *b = 0; 210154c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_MPI_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for MPI buffer length. We currently only support 32 bit integers", a); 2102c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21034dc2109aSBarry Smith PetscFunctionReturn(0); 21044dc2109aSBarry Smith } 21054dc2109aSBarry Smith 2106bafee8b4SSatish Balay #define PetscInt64Mult(a, b) ((PetscInt64)(a)) * ((PetscInt64)(b)) 21072f18eb33SBarry Smith 21082f18eb33SBarry Smith /*@C 21092f18eb33SBarry Smith 211087497f52SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive `PetscReal` and a positive `PetscInt` and truncates the value to slightly less than the maximal possible value 21112f18eb33SBarry Smith 21122f18eb33SBarry Smith Not Collective 21132f18eb33SBarry Smith 2114d8d19677SJose E. Roman Input Parameters: 211587497f52SBarry Smith + a - the `PetscReal` value 21162f18eb33SBarry Smith - b - the second value 21172f18eb33SBarry Smith 2118390e1bf2SBarry Smith Returns: 211987497f52SBarry Smith the result as a `PetscInt` value 21202f18eb33SBarry Smith 212187497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 212287497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two positive `PetscInt` and truncate to fit a `PetscInt` 212387497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 21242f18eb33SBarry Smith 2125e28ce29aSPatrick Sanan Developers Note: 212687497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 21272f18eb33SBarry Smith 21282f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21292f18eb33SBarry Smith 21301fd49c25SBarry Smith Not available from Fortran 21311fd49c25SBarry Smith 21322f18eb33SBarry Smith Level: advanced 21332f18eb33SBarry Smith 2134db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21352f18eb33SBarry Smith @*/ 21369371c9d4SSatish Balay static inline PetscInt PetscRealIntMultTruncate(PetscReal a, PetscInt b) { 21375f80ce2aSJacob Faibussowitsch PetscInt64 r = (PetscInt64)(a * (PetscReal)b); 21382f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21392f18eb33SBarry Smith return (PetscInt)r; 21402f18eb33SBarry Smith } 21412f18eb33SBarry Smith 21422f18eb33SBarry Smith /*@C 21432f18eb33SBarry Smith 214487497f52SBarry Smith PetscIntMultTruncate - Computes the product of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 21452f18eb33SBarry Smith 21462f18eb33SBarry Smith Not Collective 21472f18eb33SBarry Smith 2148d8d19677SJose E. Roman Input Parameters: 21492f18eb33SBarry Smith + a - the PetscInt value 21502f18eb33SBarry Smith - b - the second value 21512f18eb33SBarry Smith 2152390e1bf2SBarry Smith Returns: 215387497f52SBarry Smith the result as a `PetscInt` value 21542f18eb33SBarry Smith 215587497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 215687497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 215787497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 21582f18eb33SBarry Smith 21591fd49c25SBarry Smith Not available from Fortran 21601fd49c25SBarry Smith 216187497f52SBarry Smith Developers Note: 216287497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 21632f18eb33SBarry Smith 21642f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21652f18eb33SBarry Smith 21662f18eb33SBarry Smith Level: advanced 21672f18eb33SBarry Smith 2168db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21692f18eb33SBarry Smith @*/ 21709371c9d4SSatish Balay static inline PetscInt PetscIntMultTruncate(PetscInt a, PetscInt b) { 21715f80ce2aSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 21722f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21732f18eb33SBarry Smith return (PetscInt)r; 21742f18eb33SBarry Smith } 21752f18eb33SBarry Smith 2176f91af8c7SBarry Smith /*@C 2177f91af8c7SBarry Smith 217887497f52SBarry Smith PetscIntSumTruncate - Computes the sum of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 2179f91af8c7SBarry Smith 2180f91af8c7SBarry Smith Not Collective 2181f91af8c7SBarry Smith 2182d8d19677SJose E. Roman Input Parameters: 218387497f52SBarry Smith + a - the `PetscInt` value 2184f91af8c7SBarry Smith - b - the second value 2185f91af8c7SBarry Smith 2186390e1bf2SBarry Smith Returns: 218787497f52SBarry Smith the result as a `PetscInt` value 2188f91af8c7SBarry Smith 218987497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 219087497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 219187497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 2192f91af8c7SBarry Smith 2193f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2194f91af8c7SBarry Smith 2195f5f57ec0SBarry Smith Not available from Fortran 2196f5f57ec0SBarry Smith 2197f91af8c7SBarry Smith Level: advanced 2198f91af8c7SBarry Smith 2199db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2200f91af8c7SBarry Smith @*/ 22019371c9d4SSatish Balay static inline PetscInt PetscIntSumTruncate(PetscInt a, PetscInt b) { 22025f80ce2aSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 2203f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2204f91af8c7SBarry Smith return (PetscInt)r; 2205f91af8c7SBarry Smith } 2206f91af8c7SBarry Smith 22072f18eb33SBarry Smith /*@C 22082f18eb33SBarry Smith 220987497f52SBarry Smith PetscIntMultError - Computes the product of two positive `PetscInt` and generates an error with overflow. 22102f18eb33SBarry Smith 22112f18eb33SBarry Smith Not Collective 22122f18eb33SBarry Smith 2213d8d19677SJose E. Roman Input Parameters: 221487497f52SBarry Smith + a - the `PetscInt` value 22152f18eb33SBarry Smith - b - the second value 22162f18eb33SBarry Smith 2217d8d19677SJose E. Roman Output Parameter: 221887497f52SBarry Smith . result - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 22192f18eb33SBarry Smith 222087497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` and store in a `PetscInt64` 222187497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 22222f18eb33SBarry Smith 2223f5f57ec0SBarry Smith Not available from Fortran 2224f5f57ec0SBarry Smith 222587497f52SBarry Smith Developers Note: 222687497f52SBarry Smith We currently assume that `PetscInt` addition does not overflow, this is obviously wrong but requires many more checks. 22272f18eb33SBarry Smith 22282f18eb33SBarry Smith Level: advanced 22292f18eb33SBarry Smith 2230db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntMult64()`, `PetscIntSumError()` 22312f18eb33SBarry Smith @*/ 22329371c9d4SSatish Balay static inline PetscErrorCode PetscIntMultError(PetscInt a, PetscInt b, PetscInt *result) { 2233bafee8b4SSatish Balay PetscInt64 r; 22342f18eb33SBarry Smith 22352f18eb33SBarry Smith PetscFunctionBegin; 2236bafee8b4SSatish Balay r = PetscInt64Mult(a, b); 22372f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22382c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 22392f18eb33SBarry Smith #endif 2240f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 2241f91af8c7SBarry Smith PetscFunctionReturn(0); 2242f91af8c7SBarry Smith } 2243f91af8c7SBarry Smith 2244f91af8c7SBarry Smith /*@C 2245f91af8c7SBarry Smith 224687497f52SBarry Smith PetscIntSumError - Computes the sum of two positive `PetscInt` and generates an error with overflow. 2247f91af8c7SBarry Smith 2248f91af8c7SBarry Smith Not Collective 2249f91af8c7SBarry Smith 2250d8d19677SJose E. Roman Input Parameters: 225187497f52SBarry Smith + a - the `PetscInt` value 2252f91af8c7SBarry Smith - b - the second value 2253f91af8c7SBarry Smith 2254d8d19677SJose E. Roman Output Parameter: 225587497f52SBarry Smith . c - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 2256f91af8c7SBarry Smith 225787497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two 32 bit PetscInt and store in a `PetscInt64` 225887497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 2259f91af8c7SBarry Smith 2260f5f57ec0SBarry Smith Not available from Fortran 2261f5f57ec0SBarry Smith 2262f91af8c7SBarry Smith Level: advanced 2263f91af8c7SBarry Smith 2264db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2265f91af8c7SBarry Smith @*/ 22669371c9d4SSatish Balay static inline PetscErrorCode PetscIntSumError(PetscInt a, PetscInt b, PetscInt *result) { 2267bafee8b4SSatish Balay PetscInt64 r; 2268f91af8c7SBarry Smith 2269f91af8c7SBarry Smith PetscFunctionBegin; 2270bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2271f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22722c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 2273f91af8c7SBarry Smith #endif 2274f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 22752f18eb33SBarry Smith PetscFunctionReturn(0); 22762f18eb33SBarry Smith } 2277c5df96a5SBarry Smith 2278d382aafbSBarry Smith /* 22792981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2280d382aafbSBarry Smith */ 2281d382aafbSBarry Smith #if defined(hz) 2282d382aafbSBarry Smith #undef hz 2283d382aafbSBarry Smith #endif 2284d382aafbSBarry Smith 228515a5570dSLisandro Dalcin #include <limits.h> 228615a5570dSLisandro Dalcin 228715a5570dSLisandro Dalcin /* The number of bits in a byte */ 228815a5570dSLisandro Dalcin 228915a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 229015a5570dSLisandro Dalcin 2291d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2292d382aafbSBarry Smith #include <sys/types.h> 2293d382aafbSBarry Smith #endif 2294d382aafbSBarry Smith 2295d382aafbSBarry Smith /*MC 2296d382aafbSBarry Smith 229766d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 229866d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 229966d79e26SBarry Smith 230066d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 230166d79e26SBarry Smith 230266d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 230366d79e26SBarry Smith 230466d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 230566d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 230666d79e26SBarry Smith 230766d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 230866d79e26SBarry Smith 230966d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 231066d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 231166d79e26SBarry Smith version number (x.y.z). 231266d79e26SBarry Smith 231387497f52SBarry Smith `PETSC_RELEASE_DATE` is the date the x.y version was released (i.e. the version before any patch releases) 231466d79e26SBarry Smith 231587497f52SBarry Smith `PETSC_VERSION_DATE` is the date the x.y.z version was released 231666d79e26SBarry Smith 231787497f52SBarry Smith `PETSC_VERSION_GIT` is the last git commit to the repository given in the form vx.y.z-wwwww 231866d79e26SBarry Smith 231987497f52SBarry Smith `PETSC_VERSION_DATE_GIT` is the date of the last git commit to the repository 232066d79e26SBarry Smith 232187497f52SBarry Smith `PETSC_VERSION_()` is deprecated and will eventually be removed. 232266d79e26SBarry Smith 2323cbc12506SBarry Smith Level: intermediate 232466d79e26SBarry Smith 232566d79e26SBarry Smith M*/ 232666d79e26SBarry Smith 2327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[], size_t); 2328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[], size_t); 2329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[], size_t); 2330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[], size_t); 2331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2332014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[], size_t); 233327710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 23345f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt *, PetscInt *, PetscInt *, PetscInt *); 2335d382aafbSBarry Smith 23366a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt, const PetscInt[], PetscBool *); 23376a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt, const PetscMPIInt[], PetscBool *); 23386a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt, const PetscReal[], PetscBool *); 2339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt, PetscInt[]); 2340ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt, PetscInt[]); 234122ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt *, PetscInt[]); 2342b6a18d21SVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt *, PetscInt[]); 2344f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 234560e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt *); 2346d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt *); 2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt, const PetscInt[], PetscInt[]); 2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt, const char *[], PetscInt[]); 2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt, PetscInt[], PetscInt[]); 2350981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount, PetscInt[], PetscCount[]); 23516c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt, PetscInt[], PetscInt[], PetscInt[]); 2352981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount, PetscInt[], PetscInt[], PetscCount[]); 235317d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt, PetscMPIInt[]); 235417d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt *, PetscMPIInt[]); 2355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt, PetscMPIInt[], PetscMPIInt[]); 23565569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt, PetscMPIInt[], PetscInt[]); 2357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt, PetscInt[], PetscScalar[]); 235817df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt, PetscInt[], void *, size_t, void *); 2359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt, PetscReal[]); 236039f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt, const PetscReal[], PetscInt[]); 2362745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt *, PetscReal[]); 236339f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal, PetscInt, const PetscReal[], PetscReal, PetscInt *); 2364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt, PetscInt, PetscScalar[], PetscInt[]); 2365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt, PetscInt, PetscReal[], PetscInt[]); 2366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt, const PetscBool[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **, PetscInt **, PetscInt **); 23676c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt, const PetscInt[], const PetscInt[], PetscInt, const PetscInt[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **); 23686c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscInt *, PetscInt **); 2369e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt, const PetscMPIInt[], PetscInt, const PetscMPIInt[], PetscInt *, PetscMPIInt **); 2370ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2371ce605777SToby Isaac 23724d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt, void *, size_t, int (*)(const void *, const void *, void *), void *); 2373676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt, PetscInt[]); 2374676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt, PetscMPIInt[]); 2375676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt, PetscReal[]); 23764d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt, void *, size_t, void *, size_t, int (*)(const void *, const void *, void *), void *); 2377676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt, PetscInt[], PetscInt[]); 2378676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt, PetscMPIInt[], PetscMPIInt[]); 2379676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2380676f2a66SJacob Faibussowitsch 2381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[], size_t); 2383d382aafbSBarry Smith 238476bdecfbSBarry Smith /*J 2385d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2386d382aafbSBarry Smith 2387d382aafbSBarry Smith Level: beginner 2388d382aafbSBarry Smith 2389e28ce29aSPatrick Sanan Notes: 239087497f52SBarry Smith To use `PETSCSPRNG` or `PETSCRANDOM123` you must have ./configure PETSc 239125ccb61fSToby Isaac with the option --download-sprng or --download-random123 2392d382aafbSBarry Smith 2393db781477SPatrick Sanan .seealso: `PetscRandomSetType()`, `PetscRandom`, `PetscRandomCreate()` 239476bdecfbSBarry Smith J*/ 239519fd82e9SBarry Smith typedef const char *PetscRandomType; 2396d382aafbSBarry Smith #define PETSCRAND "rand" 2397d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2398d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2399c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 240025ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2401808ba619SStefano Zampini #define PETSCCURAND "curand" 2402d382aafbSBarry Smith 2403d382aafbSBarry Smith /* Logging support */ 2404014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2405d382aafbSBarry Smith 2406607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2407d382aafbSBarry Smith 2408d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2409140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2410d382aafbSBarry Smith 2411bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[], PetscErrorCode (*)(PetscRandom)); 241219fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 241419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType *); 2415fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom, PetscObject, const char[]); 2416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom, PetscViewer); 2417d382aafbSBarry Smith 2418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm, PetscRandom *); 2419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom, PetscScalar *); 2420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom, PetscReal *); 2421808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom, PetscInt, PetscScalar *); 2422808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom, PetscInt, PetscReal *); 2423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom, PetscScalar *, PetscScalar *); 2424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom, PetscScalar, PetscScalar); 2425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom, unsigned long); 2426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom, unsigned long *); 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom *); 2429d382aafbSBarry Smith 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[], char[], size_t); 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[], char[], size_t); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[], size_t); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[], char[]); 2434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[], size_t); 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[], char, PetscBool *); 2436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[], char, PetscBool *); 243797540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24388a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 243997540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2440d382aafbSBarry Smith 24419371c9d4SSatish Balay static inline PetscBool PetscBinaryBigEndian(void) { 24429371c9d4SSatish Balay long _petsc_v = 1; 24439371c9d4SSatish Balay return ((char *)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE; 24449371c9d4SSatish Balay } 244530815ce0SLisandro Dalcin 24469860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int, void *, PetscInt, PetscInt *, PetscDataType); 24479860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm, int, void *, PetscInt, PetscInt *, PetscDataType); 2448f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int, const void *, PetscInt, PetscDataType); 2449f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm, int, const void *, PetscInt, PetscDataType); 2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[], PetscFileMode, int *); 2451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm, PetscBool *); 2453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm, PetscBool *); 2454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm, char[], size_t); 2455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm, const char[], char[], size_t, PetscBool *); 2456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm, const char[], char[], size_t, PetscBool *); 2457c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2458e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[], int, int *); 2459c891a504SStefano Zampini #endif 2460d382aafbSBarry Smith 2461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int, off_t, PetscBinarySeekType, off_t *); 2462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm, int, off_t, PetscBinarySeekType, off_t *); 2463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *, PetscDataType, PetscInt); 2464d382aafbSBarry Smith 2465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[], PetscBool); 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char *); 2469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 24712a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2472d382aafbSBarry Smith 2473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt *); 2474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **); 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **, PetscMPIInt **); 2476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscInt ***, MPI_Request **); 2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscScalar ***, MPI_Request **); 2478*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt *, const void *, PetscMPIInt *, PetscMPIInt **, void *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 2479*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 2480*93d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, MPI_Request **, MPI_Request **, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 2481d382aafbSBarry Smith 24826145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 24836145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm, PetscBuildTwoSidedType); 24846145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm, PetscBuildTwoSidedType *); 24856145cd65SJed Brown 2486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm, PetscBool *, PetscBool *); 2487d382aafbSBarry Smith 2488ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2489ce94432eSBarry Smith 249045487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 249145487dadSJed Brown 2492d382aafbSBarry Smith struct _n_PetscSubcomm { 2493d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2494d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2495306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 249645487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 249745487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2498708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 249945487dadSJed Brown PetscSubcommType type; 2500e5acf8a4SHong Zhang char *subcommprefix; 2501d382aafbSBarry Smith }; 2502d382aafbSBarry Smith 25039371c9d4SSatish Balay static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) { 25049371c9d4SSatish Balay return scomm->parent; 25059371c9d4SSatish Balay } 25069371c9d4SSatish Balay static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) { 25079371c9d4SSatish Balay return scomm->child; 25089371c9d4SSatish Balay } 25099371c9d4SSatish Balay static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) { 25109371c9d4SSatish Balay return scomm->dupparent; 25119371c9d4SSatish Balay } 2512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm, PetscSubcomm *); 2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm *); 2514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm, PetscInt); 2515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm, PetscSubcommType); 251665d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm, PetscMPIInt, PetscMPIInt); 2517053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm, PetscViewer); 2518f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2519e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm, const char[]); 2520a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm, MPI_Comm *); 2521a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm, MPI_Comm *); 2522a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm, MPI_Comm *); 2523d382aafbSBarry Smith 25249962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt, PetscHeap *); 25259962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap, PetscInt, PetscInt); 25269962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap, PetscInt *, PetscInt *); 25279962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap, PetscInt *, PetscInt *); 25289962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap, PetscInt, PetscInt); 25299962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25309962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap *); 25319962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap, PetscViewer); 25329962606eSBarry Smith 25335e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25345f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm, PetscShmComm *); 25355f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25365f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25375f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm, MPI_Comm *); 25385e71baefSBarry Smith 2539a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2540a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm, PetscInt, PetscOmpCtrl *); 2541a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl, MPI_Comm *, MPI_Comm *, PetscBool *); 2542a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl *); 2543a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2544a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2545a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2546a32e93adSJunchao Zhang 254713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t, size_t, PetscSegBuffer *); 25480f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer *); 254913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer, size_t, void *); 2550137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer, void *); 2551137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer, void *); 2552137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer, void *); 255313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer, size_t *); 255413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer, size_t); 25550f453b92SJed Brown 2556471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2557471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2558471ecdacSJed Brown * possible. */ 25599371c9d4SSatish Balay static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg, size_t count, PetscInt *PETSC_RESTRICT *slot) { 25609371c9d4SSatish Balay return PetscSegBufferGet(seg, count, (void **)slot); 25619371c9d4SSatish Balay } 2562d382aafbSBarry Smith 25639de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 25649de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted *); 25659de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted *); 25669de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted, const char *, const char *, PetscBool *); 25679de0f6ecSBarry Smith 2568ace2fbaeSBarry Smith #include <stdarg.h> 2569ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char *, size_t, const char[], size_t *, va_list); 2570ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE *, const char[], va_list); 2571ace2fbaeSBarry Smith 2572268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2573fbfcfee5SBarry Smith 25741f817a21SBarry Smith /*@C 25751f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 25761f817a21SBarry Smith 257787497f52SBarry Smith Not Collective - only what is registered on rank 0 of `PETSC_COMM_WORLD` will be printed 25781f817a21SBarry Smith 25791f817a21SBarry Smith Input Parameters: 25801f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 258187497f52SBarry Smith - set - a boolean variable initially set to `PETSC_FALSE`; this is used to insure only a single registration of the citation 25821f817a21SBarry Smith 2583850545d0SSatish Balay Level: intermediate 2584850545d0SSatish Balay 2585f5f57ec0SBarry Smith Not available from Fortran 2586f5f57ec0SBarry Smith 25871f817a21SBarry Smith Options Database: 2588063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 25891f817a21SBarry Smith @*/ 25909371c9d4SSatish Balay static inline PetscErrorCode PetscCitationsRegister(const char cit[], PetscBool *set) { 2591dff31646SBarry Smith size_t len; 2592dff31646SBarry Smith char *vstring; 2593dff31646SBarry Smith 25941f817a21SBarry Smith PetscFunctionBegin; 25958d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 25969566063dSJacob Faibussowitsch PetscCall(PetscStrlen(cit, &len)); 25979566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(PetscCitationsList, len, &vstring)); 25989566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(vstring, cit, len)); 2599dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26001f817a21SBarry Smith PetscFunctionReturn(0); 2601dff31646SBarry Smith } 2602dff31646SBarry Smith 2603d8174014SToby Isaac PETSC_EXTERN PETSC_DEPRECATED_FUNCTION("Google has discontinued its URL shortener service") PetscErrorCode PetscURLShorten(const char[], char[], size_t c); 2604fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm, char[], char[], size_t); 2605fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm, const char[], char[], size_t); 2606f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm, const char[], const char[]); 2607fe278a28SBarry Smith 2608f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm, char[], char[], size_t); 2609f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm, const char[], char[], char[], size_t); 2610b967cddfSBarry Smith 26119f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm, const char[], char[], size_t); 26129f4d3c52SBarry Smith 261304102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm, const char[], const char[], PetscBool *); 2614763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm, const char[], const char[], PetscBool *); 2615dff31646SBarry Smith 261668e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[], const char[], char[], size_t, PetscBool *); 26175dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[], const char[], const char[], size_t); 2618d382aafbSBarry Smith 2619b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 26209371c9d4SSatish Balay static inline unsigned int PetscStrHash(const char *str) { 2621df05ca09SBarry Smith unsigned int c, hash = 5381; 2622df05ca09SBarry Smith 2623503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2624df05ca09SBarry Smith return hash; 2625df05ca09SBarry Smith } 262677a5e07dSBarry Smith 262777a5e07dSBarry Smith /*MC 262887497f52SBarry Smith MPIU_Allreduce - a PETSc replacement for `MPI_Allreduce()` that tries to determine if the call from all the MPI ranks occur from the 262987497f52SBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI ranks follow different code paths 263087497f52SBarry Smith resulting in inconsistent and incorrect calls to `MPI_Allreduce()`. 263177a5e07dSBarry Smith 2632d083f849SBarry Smith Collective 263377a5e07dSBarry Smith 263477a5e07dSBarry Smith Synopsis: 263577a5e07dSBarry Smith #include <petscsys.h> 263677a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 263777a5e07dSBarry Smith 263877a5e07dSBarry Smith Input Parameters: 2639df05ca09SBarry Smith + a - pointer to the input data to be reduced 2640df05ca09SBarry Smith . c - the number of MPI data items in a and b 264187497f52SBarry Smith . d - the MPI datatype, for example `MPI_INT` 264287497f52SBarry Smith . e - the MPI operation, for example `MPI_SUM` 2643df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 264477a5e07dSBarry Smith 264577a5e07dSBarry Smith Output Parameter: 2646df05ca09SBarry Smith . b - the reduced values 264777a5e07dSBarry Smith 2648e28ce29aSPatrick Sanan Notes: 264987497f52SBarry Smith In optimized mode this directly calls `MPI_Allreduce()` 265077a5e07dSBarry Smith 2651df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2652df05ca09SBarry Smith 265387497f52SBarry Smith The error code this returns should be checked with `PetscCall()` even though it looks like an MPI function because it always returns PETSc error codes 2654df05ca09SBarry Smith 265577a5e07dSBarry Smith Level: developer 265677a5e07dSBarry Smith 2657db781477SPatrick Sanan .seealso: `MPI_Allreduce()` 265877a5e07dSBarry Smith M*/ 26599371c9d4SSatish Balay #define MPIU_Allreduce(a, b, c, d, e, fcomm) \ 26609371c9d4SSatish Balay PetscMacroReturnStandard(PetscMPIInt a_b1[6], a_b2[6]; int _mpiu_allreduce_c_int = (int)c; a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0]; a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2]; a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4]; PetscCallMPI(MPI_Allreduce(a_b1, a_b2, 6, MPI_INT, MPI_MAX, fcomm)); PetscCheck(-a_b2[0] == a_b2[1], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (code lines) on different processors"); PetscCheck(-a_b2[2] == a_b2[3], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (functions) on different processors"); PetscCheck(-a_b2[4] == a_b2[5], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called with different counts %d on different processors", _mpiu_allreduce_c_int); PetscCallMPI(MPI_Allreduce((a), (b), (c), d, e, (fcomm)));) 2661b2566f29SBarry Smith #else 26621c2dc1cbSBarry Smith #define MPIU_Allreduce(a, b, c, d, e, fcomm) PetscMacroReturnStandard(PetscCallMPI(MPI_Allreduce((a), (b), (c), d, e, (fcomm)))) 2663b2566f29SBarry Smith #endif 2664b2566f29SBarry Smith 2665b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 26668198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint, PetscMPIInt, MPI_Info, MPI_Comm, void *, MPI_Win *); 26678198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win, PetscMPIInt, MPI_Aint *, PetscMPIInt *, void *); 26682f065d89SBarry Smith #endif 26698198064fSBarry Smith 2670cd88fca5SStefano Zampini /* this is a vile hack */ 2671cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 26729371c9d4SSatish Balay #if !defined(PETSC_NECMPI_VERSION_MAJOR) || !defined(PETSC_NECMPI_VERSION_MINOR) || PETSC_NECMPI_VERSION_MAJOR < 2 || (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2673cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL, 0); 2674cd88fca5SStefano Zampini #endif 2675961fb248SStefano Zampini #endif 2676cd88fca5SStefano Zampini 267712801b39SBarry Smith /* 267860fbe2beSVaclav Hapla List of external packages and queries on it 267960fbe2beSVaclav Hapla */ 268060fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[], PetscBool *); 268160fbe2beSVaclav Hapla 2682a52b435bSMark Adams /* 2683a52b435bSMark Adams OpenMP support 2684a52b435bSMark Adams */ 2685a52b435bSMark Adams #if defined(_OPENMP) 2686a52b435bSMark Adams #define PetscPragmaOMP(...) _Pragma(PetscStringize(omp __VA_ARGS__)) 2687a52b435bSMark Adams #else // no OpenMP so no threads 2688a52b435bSMark Adams #define PetscPragmaOMP(...) 2689a52b435bSMark Adams #endif 2690a52b435bSMark Adams 2691f1f2ae84SBarry Smith /* this cannot go here because it may be in a different shared library */ 2692f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerBegin(void); 2693f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerEnd(void); 2694f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPICommsDestroy(void); 2695d382aafbSBarry Smith #endif 2696