1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith #endif 25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith #define _BSD_SOURCE 2773fca5a0SBarry Smith #endif 2807f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay #define _DEFAULT_SOURCE 3007f00807SSatish Balay #endif 31ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar #define _GNU_SOURCE 33ea0fecefSShri Abhyankar #endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36d382aafbSBarry Smith /* ========================================================================== */ 37d382aafbSBarry Smith /* 382c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 39d382aafbSBarry Smith */ 401ec50b02SJed Brown #if defined(__cplusplus) 411ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 421ec50b02SJed Brown #else 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 441ec50b02SJed Brown #endif 45d382aafbSBarry Smith 46c5e4d11fSDmitry Karpeev /* ========================================================================== */ 47c5e4d11fSDmitry Karpeev /* 48c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 491cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 501cc8b206SBarry Smith file within an extern "C". 51c5e4d11fSDmitry Karpeev */ 52c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 53c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 54c5e4d11fSDmitry Karpeev #endif 55c5e4d11fSDmitry Karpeev 56ed938b00SJed Brown #if defined(__cplusplus) 57ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 58ed938b00SJed Brown #else 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 60ed938b00SJed Brown #endif 61ed938b00SJed Brown 62ed938b00SJed Brown #if defined(__cplusplus) 6358c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 64ed938b00SJed Brown #else 6558c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 6858c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 6958c433abSLisandro Dalcin 70ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 71014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 72014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7526703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7626703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7726703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 7826703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 79014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 80014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 82d382aafbSBarry Smith #else 83014dd563SJed Brown # define PETSC_DLLEXPORT 84014dd563SJed Brown # define PETSC_DLLIMPORT 8521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 86014dd563SJed Brown #endif 87014dd563SJed Brown 88014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 89014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 90014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 91014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 92014dd563SJed Brown #endif 93014dd563SJed Brown 941cc8b206SBarry Smith /* 951cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 961cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 971cc8b206SBarry Smith used from C and are always visible in the shared libraries 981cc8b206SBarry Smith */ 992c280183SJed Brown #if defined(__cplusplus) 100014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 101638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C" 10221f66b81SJed Brown #define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 103014dd563SJed Brown #else 104014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 105638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF 1066258c452SJed Brown #define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 107d382aafbSBarry Smith #endif 10827710113SBarry Smith 1092c8e378dSBarry Smith #include <petscversion.h> 110301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 111d382aafbSBarry Smith 112d382aafbSBarry Smith /* ========================================================================== */ 113d382aafbSBarry Smith 114d382aafbSBarry Smith /* 115d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 116d382aafbSBarry Smith 117d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 118d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 119d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 120d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 121d382aafbSBarry Smith mpicxx.h directly in their code 122d382aafbSBarry Smith */ 123fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 124d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 125fa9e63e2SJed Brown #endif 126fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 127d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 128fa9e63e2SJed Brown #endif 129e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 130e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 131e771154cSJed Brown #else 1322c8e378dSBarry Smith # include <mpi.h> 133e771154cSJed Brown #endif 13465013866SBarry Smith 135d382aafbSBarry Smith /* 136a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 137a7886beaSBarry Smith This usually happens because 138a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 139a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 140a7886beaSBarry Smith */ 141a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 142a7886beaSBarry Smith # if !defined(__MPIUNI_H) 143a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 144a7886beaSBarry Smith # endif 14541f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 14641f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 14741f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 14841f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 14941f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 15041f4af4cSSatish Balay # endif 15141f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 15241f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 15341f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 15441f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 15541f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 15641f4af4cSSatish Balay # endif 157a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 15841f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 159a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 160ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 161a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 162a7886beaSBarry Smith # endif 163a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 164a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 165a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 166ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 167c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 168a7886beaSBarry Smith # endif 16941f4af4cSSatish Balay #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) 17041f4af4cSSatish Balay # error "PETSc was configured with undetermined MPI - but now appears to be compiling using either of OpenMPI or a MPICH variant" 171a7886beaSBarry Smith #endif 172a7886beaSBarry Smith 173a7886beaSBarry Smith /* 1742981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 175d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 176d382aafbSBarry Smith */ 177d382aafbSBarry Smith #include <stdio.h> 178d382aafbSBarry Smith 179d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 180d382aafbSBarry Smith #if !defined(MPIAPI) 181d382aafbSBarry Smith #define MPIAPI 182d382aafbSBarry Smith #endif 183d382aafbSBarry Smith 1841cc8b206SBarry Smith /* 1851cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1861cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1871cc8b206SBarry Smith does not match the actual type of the argument being passed in 1881cc8b206SBarry Smith */ 189c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 190894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 191894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1928ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1938ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 194894dd566SJed Brown # endif 195894dd566SJed Brown #endif 196894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 197894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 1988ad47952SJed Brown # define PetscAttrMPITypeTag(type) 1998ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 200894dd566SJed Brown #endif 201b3506946SBarry Smith 202d382aafbSBarry Smith /*MC 2031957e957SBarry Smith PetscErrorCode - datatype used for return error code from almost all PETSc functions 204d382aafbSBarry Smith 205d382aafbSBarry Smith Level: beginner 206d382aafbSBarry Smith 207d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 208d382aafbSBarry Smith M*/ 209d382aafbSBarry Smith typedef int PetscErrorCode; 210d382aafbSBarry Smith 211d382aafbSBarry Smith /*MC 212d382aafbSBarry Smith 213503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 214d382aafbSBarry Smith 215e28ce29aSPatrick Sanan Notes: 216e28ce29aSPatrick Sanan Use PetscClassIdRegister() to obtain a new value for a new class being created. Usually 2171957e957SBarry Smith XXXInitializePackage() calls it for each class it defines. 2181957e957SBarry Smith 219e28ce29aSPatrick Sanan Developer Notes: 220e28ce29aSPatrick Sanan Internal integer stored in the _p_PetscObject data structure. 2211957e957SBarry Smith These are all computed by an offset from the lowest one, PETSC_SMALLEST_CLASSID. 2221957e957SBarry Smith 2231957e957SBarry Smith Level: developer 224d382aafbSBarry Smith 2250700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 226d382aafbSBarry Smith M*/ 2270700a824SBarry Smith typedef int PetscClassId; 228d382aafbSBarry Smith 229d382aafbSBarry Smith 230d382aafbSBarry Smith /*MC 231d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 232d382aafbSBarry Smith 233d382aafbSBarry Smith Level: intermediate 234d382aafbSBarry Smith 235e28ce29aSPatrick Sanan Notes: 236e28ce29aSPatrick Sanan usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 237e28ce29aSPatrick Sanan standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt; it remains 32 bit. 238d382aafbSBarry Smith 2394dc2109aSBarry Smith PetscMPIIntCast(a,&b) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 2402981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error. 241d382aafbSBarry Smith 2421cc8b206SBarry Smith .seealso: PetscBLASInt, PetscInt, PetscMPIIntCast() 243d382aafbSBarry Smith 244d382aafbSBarry Smith M*/ 245d382aafbSBarry Smith typedef int PetscMPIInt; 246d382aafbSBarry Smith 247d382aafbSBarry Smith /*MC 248d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 249d382aafbSBarry Smith 250d382aafbSBarry Smith Level: intermediate 251d382aafbSBarry Smith 252d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 253d382aafbSBarry Smith M*/ 254d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 2555a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 256d382aafbSBarry Smith 257fab38c73SJed Brown #if defined(PETSC_HAVE_STDINT_H) 258fab38c73SJed Brown #include <stdint.h> 259fab38c73SJed Brown #endif 260a05e1a72SSatish Balay #if defined (PETSC_HAVE_INTTYPES_H) 261cf3f95aeSBarry Smith #if !defined(__STDC_FORMAT_MACROS) 26213e758fdSSatish Balay #define __STDC_FORMAT_MACROS /* required for using PRId64 from c++ */ 263cf3f95aeSBarry Smith #endif 264a05e1a72SSatish Balay #include <inttypes.h> 26537354ed4SSatish Balay # if !defined(PRId64) 26637354ed4SSatish Balay # define PRId64 "ld" 26737354ed4SSatish Balay # endif 268a05e1a72SSatish Balay #endif 269fab38c73SJed Brown 27099a4b90dSDave May typedef short PetscShort; 27199a4b90dSDave May typedef char PetscChar; 27299a4b90dSDave May typedef float PetscFloat; 27399a4b90dSDave May 274d382aafbSBarry Smith /*MC 275bb42e86aSJed Brown PetscInt - PETSc type that represents an integer, used primarily to 276e28ce29aSPatrick Sanan represent size of arrays and indexing into arrays. Its size can be configured with the option --with-64-bit-indices to be either 32-bit (default) or 64-bit. 277d382aafbSBarry Smith 278e28ce29aSPatrick Sanan Notes: 279e28ce29aSPatrick Sanan For MPI calls that require datatypes, use MPIU_INT as the datatype for PetscInt. It will automatically work correctly regardless of the size of PetscInt. 280390e1bf2SBarry Smith 281e28ce29aSPatrick Sanan Level: beginner 282390e1bf2SBarry Smith 283e28ce29aSPatrick Sanan .seealso: PetscBLASInt, PetscMPIInt, PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT 284d382aafbSBarry Smith M*/ 285e28ce29aSPatrick Sanan 286e28ce29aSPatrick Sanan /*MC 287e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 288e28ce29aSPatrick Sanan 289e28ce29aSPatrick Sanan Notes: 290e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 291e28ce29aSPatrick Sanan 292e28ce29aSPatrick Sanan Level: beginner 293e28ce29aSPatrick Sanan 294e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 295e28ce29aSPatrick Sanan M*/ 296e28ce29aSPatrick Sanan 29737354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 298bafee8b4SSatish Balay typedef int64_t PetscInt64; 299bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 300a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 301fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 302bafee8b4SSatish Balay typedef long long PetscInt64; 303bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 304a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 305f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 306bafee8b4SSatish Balay typedef __int64 PetscInt64; 307bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 308a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 309236ed0a3SSatish Balay #else 310bafee8b4SSatish Balay #error "cannot determine PetscInt64 type" 311236ed0a3SSatish Balay #endif 312b7b8f77aSBarry Smith 313b7b8f77aSBarry Smith #if PETSC_SIZEOF_VOID_P == 4 314b7b8f77aSBarry Smith #define MPIU_FORTRANADDR MPI_INT 315b7b8f77aSBarry Smith #else 316b7b8f77aSBarry Smith #define MPIU_FORTRANADDR MPIU_INT64 317b7b8f77aSBarry Smith #endif 318b7b8f77aSBarry Smith 319d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 320bafee8b4SSatish Balay typedef PetscInt64 PetscInt; 321bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64 322a05e1a72SSatish Balay #define PetscInt_FMT PetscInt64_FMT 323d382aafbSBarry Smith #else 324d382aafbSBarry Smith typedef int PetscInt; 325d382aafbSBarry Smith #define MPIU_INT MPI_INT 326a05e1a72SSatish Balay #define PetscInt_FMT "d" 327d382aafbSBarry Smith #endif 328d382aafbSBarry Smith 329702bc34aSSatish Balay /*MC 330702bc34aSSatish Balay PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 331702bc34aSSatish Balay 332e28ce29aSPatrick Sanan Notes: 333e28ce29aSPatrick Sanan Usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 334702bc34aSSatish Balay standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 335702bc34aSSatish Balay (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below). 336702bc34aSSatish Balay 337c5df96a5SBarry Smith PetscErrorCode PetscBLASIntCast(a,&b) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 3382981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error 339702bc34aSSatish Balay 340e28ce29aSPatrick Sanan Installation Notes: 341e28ce29aSPatrick Sanan The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc, 342702bc34aSSatish Balay if you run ./configure with the option 343149a18a2SBarry Smith --with-blaslapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib] 3442981ebdbSBarry Smith but you need to also use --known-64-bit-blas-indices. 3452981ebdbSBarry Smith 346390e1bf2SBarry Smith MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with 347390e1bf2SBarry Smith --known-64-bit-blas-indices 348390e1bf2SBarry Smith 349390e1bf2SBarry Smith OpenBLAS can also be built to use 64 bit integers. The ./configure options --download-openblas -download-openblas-64-bit-blas-indices 350390e1bf2SBarry Smith will build a 64 bit integer version 3512981ebdbSBarry Smith 352e28ce29aSPatrick Sanan Developer Notes: 353e28ce29aSPatrick Sanan Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK. 354702bc34aSSatish Balay 355702bc34aSSatish Balay External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot 356702bc34aSSatish Balay be used with PETSc if you have set PetscBLASInt to long int. 357702bc34aSSatish Balay 358e28ce29aSPatrick Sanan Level: intermediate 359e28ce29aSPatrick Sanan 3601cc8b206SBarry Smith .seealso: PetscMPIInt, PetscInt, PetscBLASIntCast() 361702bc34aSSatish Balay 362702bc34aSSatish Balay M*/ 363702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES) 364bafee8b4SSatish Balay typedef PetscInt64 PetscBLASInt; 365702bc34aSSatish Balay #else 366702bc34aSSatish Balay typedef int PetscBLASInt; 367702bc34aSSatish Balay #endif 368702bc34aSSatish Balay 369503cfb0cSBarry Smith /* 370503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 371503cfb0cSBarry Smith */ 372d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 373adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED 374d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 375adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG 376d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 377adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG 378d382aafbSBarry Smith #else 379d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 380d382aafbSBarry Smith #endif 381d382aafbSBarry Smith 382d382aafbSBarry Smith /* 383d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 384d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 385d382aafbSBarry Smith */ 386014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 387d382aafbSBarry Smith 388d382aafbSBarry Smith /* 389d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 390d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 391d382aafbSBarry Smith */ 392014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 393d382aafbSBarry Smith 394d382aafbSBarry Smith /*MC 395d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 396d382aafbSBarry Smith 397d382aafbSBarry Smith Synopsis: 398aaa7dc30SBarry Smith #include <petscsys.h> 399ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 400d382aafbSBarry Smith 401eca87e8dSBarry Smith Not Collective 402eca87e8dSBarry Smith 403d382aafbSBarry Smith Input Parameters: 404d382aafbSBarry Smith . cond - condition or expression 405d382aafbSBarry Smith 406e28ce29aSPatrick Sanan Notes: 407e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 408d382aafbSBarry Smith branch is unlikely. 409d382aafbSBarry Smith 410d382aafbSBarry Smith Level: advanced 411d382aafbSBarry Smith 412d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 413d382aafbSBarry Smith M*/ 414d382aafbSBarry Smith 415d382aafbSBarry Smith /*MC 416d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 417d382aafbSBarry Smith 418d382aafbSBarry Smith Synopsis: 419aaa7dc30SBarry Smith #include <petscsys.h> 42023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 421d382aafbSBarry Smith 422eca87e8dSBarry Smith Not Collective 423eca87e8dSBarry Smith 424d382aafbSBarry Smith Input Parameters: 425d382aafbSBarry Smith . cond - condition or expression 426d382aafbSBarry Smith 427e28ce29aSPatrick Sanan Notes: 428e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 429d382aafbSBarry Smith branch is likely. 430d382aafbSBarry Smith 431d382aafbSBarry Smith Level: advanced 432d382aafbSBarry Smith 433d382aafbSBarry Smith .seealso: PetscUnlikely() 434d382aafbSBarry Smith M*/ 435d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 436d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 437d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 438d382aafbSBarry Smith #else 439cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 440cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 441d382aafbSBarry Smith #endif 442d382aafbSBarry Smith 443d382aafbSBarry Smith /* 444d382aafbSBarry Smith Declare extern C stuff after including external header files 445d382aafbSBarry Smith */ 446d382aafbSBarry Smith 447d382aafbSBarry Smith 448d382aafbSBarry Smith /* 449d382aafbSBarry Smith Basic PETSc constants 450d382aafbSBarry Smith */ 451d382aafbSBarry Smith 452d382aafbSBarry Smith /*E 453ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 454d382aafbSBarry Smith 455d382aafbSBarry Smith Level: beginner 456d382aafbSBarry Smith 457e28ce29aSPatrick Sanan Developer Note: 458e28ce29aSPatrick Sanan Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 45934e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 46034e82e7dSBarry Smith 4611cc8b206SBarry Smith .seealso: PETSC_TRUE, PETSC_FALSE, PetscNot() 462d382aafbSBarry Smith E*/ 463ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 4646a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 4655a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 46670b3c8c7SBarry Smith 4678b49ba18SBarry Smith /* 468390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4698b49ba18SBarry Smith */ 4708b49ba18SBarry Smith #include <petscmath.h> 4718b49ba18SBarry Smith 47270b3c8c7SBarry Smith /*E 47370b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 47470b3c8c7SBarry Smith 47570b3c8c7SBarry Smith Level: beginner 47670b3c8c7SBarry Smith 47770b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 47870b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 47970b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 48070b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 48170b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 48270b3c8c7SBarry Smith 48370b3c8c7SBarry Smith E*/ 48470b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 4856a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 486d382aafbSBarry Smith 487d382aafbSBarry Smith /*MC 488ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 489d382aafbSBarry Smith 490d382aafbSBarry Smith Level: beginner 491d382aafbSBarry Smith 492e28ce29aSPatrick Sanan Note: 493e28ce29aSPatrick Sanan Zero integer 494d382aafbSBarry Smith 495ace3abfcSBarry Smith .seealso: PetscBool, PETSC_TRUE 496d382aafbSBarry Smith M*/ 497d382aafbSBarry Smith 498d382aafbSBarry Smith /*MC 499ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 500d382aafbSBarry Smith 501d382aafbSBarry Smith Level: beginner 502d382aafbSBarry Smith 503e28ce29aSPatrick Sanan Note: 504e28ce29aSPatrick Sanan Nonzero integer 505d382aafbSBarry Smith 506ace3abfcSBarry Smith .seealso: PetscBool, PETSC_FALSE 507d382aafbSBarry Smith M*/ 508d382aafbSBarry Smith 509d382aafbSBarry Smith /*MC 5100298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 511d382aafbSBarry Smith 512d382aafbSBarry Smith Level: beginner 513d382aafbSBarry Smith 514e28ce29aSPatrick Sanan Note: 515e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 516d382aafbSBarry Smith some default 517d382aafbSBarry Smith 518e28ce29aSPatrick Sanan Fortran Notes: 519e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 520d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 521d382aafbSBarry Smith 522e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 523d382aafbSBarry Smith 524d382aafbSBarry Smith M*/ 5250298fd71SBarry Smith #define PETSC_IGNORE NULL 526d382aafbSBarry Smith 527c528d872SBarry Smith /* This is deprecated */ 528c528d872SBarry Smith #define PETSC_NULL NULL 529c528d872SBarry Smith 530d382aafbSBarry Smith /*MC 531557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 532557d4da8SBarry Smith where you wish PETSc to use the default. 533557d4da8SBarry Smith 534557d4da8SBarry Smith Level: beginner 535557d4da8SBarry Smith 536e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 537557d4da8SBarry Smith 538557d4da8SBarry Smith M*/ 539557d4da8SBarry Smith #define PETSC_DECIDE -1 540557d4da8SBarry Smith 541557d4da8SBarry Smith /*MC 542d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 543d382aafbSBarry Smith where you wish PETSc to compute the required value. 544d382aafbSBarry Smith 545d382aafbSBarry Smith Level: beginner 546d382aafbSBarry Smith 547e28ce29aSPatrick Sanan Developer Note: 548e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 549557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 550557d4da8SBarry Smith 5510298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 552d382aafbSBarry Smith 553d382aafbSBarry Smith M*/ 554d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 555d382aafbSBarry Smith 556d382aafbSBarry Smith /*MC 557557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 558557d4da8SBarry Smith where you wish PETSc to use the default. 559557d4da8SBarry Smith 560557d4da8SBarry Smith Level: beginner 561557d4da8SBarry Smith 562e28ce29aSPatrick Sanan Fortran Notes: 563e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 564557d4da8SBarry Smith 5650298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 566557d4da8SBarry Smith 567557d4da8SBarry Smith M*/ 568557d4da8SBarry Smith #define PETSC_DEFAULT -2 569557d4da8SBarry Smith 570557d4da8SBarry Smith /*MC 571d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 572d382aafbSBarry Smith all the processs that PETSc knows about. 573d382aafbSBarry Smith 574d382aafbSBarry Smith Level: beginner 575d382aafbSBarry Smith 576e28ce29aSPatrick Sanan Notes: 577e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 578d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 579d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 580a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 581a990b902SBarry Smith 582a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 583a990b902SBarry Smith is called because it may not have a valid value yet. 584d382aafbSBarry Smith 585d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 586d382aafbSBarry Smith 587d382aafbSBarry Smith M*/ 588014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 589d382aafbSBarry Smith 590d382aafbSBarry Smith /*MC 591503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 592d382aafbSBarry Smith 593d382aafbSBarry Smith Level: beginner 594d382aafbSBarry Smith 595e28ce29aSPatrick Sanan Notes: 596e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 597a990b902SBarry Smith 598d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 599d382aafbSBarry Smith 600d382aafbSBarry Smith M*/ 601d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 602d382aafbSBarry Smith 603d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 604014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 605014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 6064cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 60782f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 608d382aafbSBarry Smith 609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 612d382aafbSBarry Smith 613d382aafbSBarry Smith /*MC 61495dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 615d382aafbSBarry Smith 616eca87e8dSBarry Smith Synopsis: 617aaa7dc30SBarry Smith #include <petscsys.h> 618eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 619eca87e8dSBarry Smith 620eca87e8dSBarry Smith Not Collective 621eca87e8dSBarry Smith 622d382aafbSBarry Smith Input Parameter: 623d382aafbSBarry Smith . m - number of bytes to allocate 624d382aafbSBarry Smith 625d382aafbSBarry Smith Output Parameter: 626d382aafbSBarry Smith . result - memory allocated 627d382aafbSBarry Smith 628d382aafbSBarry Smith Level: beginner 629d382aafbSBarry Smith 63049d7da52SJed Brown Notes: 63149d7da52SJed Brown Memory is always allocated at least double aligned 632d382aafbSBarry Smith 63349d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 634d382aafbSBarry Smith 635d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 636d382aafbSBarry Smith 637d382aafbSBarry Smith Concepts: memory allocation 638d382aafbSBarry Smith 639d382aafbSBarry Smith M*/ 64049d7da52SJed Brown #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 641d382aafbSBarry Smith 642d382aafbSBarry Smith /*MC 6433221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 6443221ece2SMatthew G. Knepley 6453221ece2SMatthew G. Knepley Synopsis: 6463221ece2SMatthew G. Knepley #include <petscsys.h> 6473221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 6483221ece2SMatthew G. Knepley 6493221ece2SMatthew G. Knepley Not Collective 6503221ece2SMatthew G. Knepley 6513221ece2SMatthew G. Knepley Input Parameters: 6523221ece2SMatthew G. Knepley + m - number of bytes to allocate 6533221ece2SMatthew G. Knepley - result - initial memory allocated 6543221ece2SMatthew G. Knepley 6553221ece2SMatthew G. Knepley Output Parameter: 6563221ece2SMatthew G. Knepley . result - new memory allocated 6573221ece2SMatthew G. Knepley 6583221ece2SMatthew G. Knepley Level: developer 6593221ece2SMatthew G. Knepley 6603221ece2SMatthew G. Knepley Notes: 6613221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6623221ece2SMatthew G. Knepley 6633221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6643221ece2SMatthew G. Knepley 6653221ece2SMatthew G. Knepley Concepts: memory allocation 6663221ece2SMatthew G. Knepley 6673221ece2SMatthew G. Knepley M*/ 6683221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6693221ece2SMatthew G. Knepley 6703221ece2SMatthew G. Knepley /*MC 671503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 672d382aafbSBarry Smith 673d382aafbSBarry Smith Synopsis: 674aaa7dc30SBarry Smith #include <petscsys.h> 675d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 676d382aafbSBarry Smith 677eca87e8dSBarry Smith Not Collective 678eca87e8dSBarry Smith 679eca87e8dSBarry Smith Input Parameters: 680eca87e8dSBarry Smith . addr - address to align (any pointer type) 681eca87e8dSBarry Smith 682d382aafbSBarry Smith Level: developer 683d382aafbSBarry Smith 684d382aafbSBarry Smith .seealso: PetscMallocAlign() 685d382aafbSBarry Smith 686d382aafbSBarry Smith Concepts: memory allocation 687d382aafbSBarry Smith M*/ 688d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 689d382aafbSBarry Smith 690d382aafbSBarry Smith /*MC 691785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 692d382aafbSBarry Smith 693eca87e8dSBarry Smith Synopsis: 694aaa7dc30SBarry Smith #include <petscsys.h> 695785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 696785e854fSJed Brown 697785e854fSJed Brown Not Collective 698785e854fSJed Brown 699785e854fSJed Brown Input Parameter: 700390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 701785e854fSJed Brown 702785e854fSJed Brown Output Parameter: 703785e854fSJed Brown . r1 - memory allocated in first chunk 704785e854fSJed Brown 705e28ce29aSPatrick Sanan Note: 706e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 707390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 708390e1bf2SBarry Smith $ PetscInt *id; 709390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 710390e1bf2SBarry Smith not 711390e1bf2SBarry Smith $ PetscInt *id; 712390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 713390e1bf2SBarry Smith 714390e1bf2SBarry Smith Does not zero the memory allocatd, used PetscCalloc1() to obtain memory that has been zeroed. 715390e1bf2SBarry Smith 716390e1bf2SBarry Smith Level: beginner 717785e854fSJed Brown 7181795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 719785e854fSJed Brown 720785e854fSJed Brown Concepts: memory allocation 721785e854fSJed Brown 722785e854fSJed Brown M*/ 7232553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 724785e854fSJed Brown 725785e854fSJed Brown /*MC 7261795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 7271795a4d1SJed Brown 7281795a4d1SJed Brown Synopsis: 729aaa7dc30SBarry Smith #include <petscsys.h> 7301795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 7311795a4d1SJed Brown 7321795a4d1SJed Brown Not Collective 7331795a4d1SJed Brown 7341795a4d1SJed Brown Input Parameter: 7351795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7361795a4d1SJed Brown 7371795a4d1SJed Brown Output Parameter: 7381795a4d1SJed Brown . r1 - memory allocated in first chunk 7391795a4d1SJed Brown 740e28ce29aSPatrick Sanan Notes: 741e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 742390e1bf2SBarry Smith 743390e1bf2SBarry Smith Level: beginner 7441795a4d1SJed Brown 7451795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7461795a4d1SJed Brown 7471795a4d1SJed Brown Concepts: memory allocation 7481795a4d1SJed Brown 7491795a4d1SJed Brown M*/ 7502553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7511795a4d1SJed Brown 7521795a4d1SJed Brown /*MC 753dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 754d382aafbSBarry Smith 755eca87e8dSBarry Smith Synopsis: 756aaa7dc30SBarry Smith #include <petscsys.h> 757dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 758eca87e8dSBarry Smith 759eca87e8dSBarry Smith Not Collective 760eca87e8dSBarry Smith 761d382aafbSBarry Smith Input Parameter: 762d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 763dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 764d382aafbSBarry Smith 765d382aafbSBarry Smith Output Parameter: 766d382aafbSBarry Smith + r1 - memory allocated in first chunk 767d382aafbSBarry Smith - r2 - memory allocated in second chunk 768d382aafbSBarry Smith 769d382aafbSBarry Smith Level: developer 770d382aafbSBarry Smith 7711795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 772d382aafbSBarry Smith 773d382aafbSBarry Smith Concepts: memory allocation 774d382aafbSBarry Smith 775d382aafbSBarry Smith M*/ 7762553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 777d382aafbSBarry Smith 778d382aafbSBarry Smith /*MC 7791795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 780d382aafbSBarry Smith 781eca87e8dSBarry Smith Synopsis: 782aaa7dc30SBarry Smith #include <petscsys.h> 7831795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 784eca87e8dSBarry Smith 785eca87e8dSBarry Smith Not Collective 786eca87e8dSBarry Smith 787d382aafbSBarry Smith Input Parameter: 788d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7891795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7901795a4d1SJed Brown 7911795a4d1SJed Brown Output Parameter: 7921795a4d1SJed Brown + r1 - memory allocated in first chunk 7931795a4d1SJed Brown - r2 - memory allocated in second chunk 7941795a4d1SJed Brown 7951795a4d1SJed Brown Level: developer 7961795a4d1SJed Brown 7971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7981795a4d1SJed Brown 7991795a4d1SJed Brown Concepts: memory allocation 8001795a4d1SJed Brown M*/ 8012553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 8021795a4d1SJed Brown 8031795a4d1SJed Brown /*MC 804dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 805d382aafbSBarry Smith 806d382aafbSBarry Smith Synopsis: 807aaa7dc30SBarry Smith #include <petscsys.h> 808dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 809d382aafbSBarry Smith 810d382aafbSBarry Smith Not Collective 811d382aafbSBarry Smith 812d382aafbSBarry Smith Input Parameter: 813d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 814d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 815dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 816d382aafbSBarry Smith 817d382aafbSBarry Smith Output Parameter: 818d382aafbSBarry Smith + r1 - memory allocated in first chunk 819d382aafbSBarry Smith . r2 - memory allocated in second chunk 820d382aafbSBarry Smith - r3 - memory allocated in third chunk 821d382aafbSBarry Smith 822d382aafbSBarry Smith Level: developer 823d382aafbSBarry Smith 8241795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 825d382aafbSBarry Smith 826d382aafbSBarry Smith Concepts: memory allocation 827d382aafbSBarry Smith 828d382aafbSBarry Smith M*/ 8292553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 830d382aafbSBarry Smith 831d382aafbSBarry Smith /*MC 8321795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 833d382aafbSBarry Smith 834eca87e8dSBarry Smith Synopsis: 835aaa7dc30SBarry Smith #include <petscsys.h> 8361795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 837eca87e8dSBarry Smith 838eca87e8dSBarry Smith Not Collective 839eca87e8dSBarry Smith 840d382aafbSBarry Smith Input Parameter: 841d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 842d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8431795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8441795a4d1SJed Brown 8451795a4d1SJed Brown Output Parameter: 8461795a4d1SJed Brown + r1 - memory allocated in first chunk 8471795a4d1SJed Brown . r2 - memory allocated in second chunk 8481795a4d1SJed Brown - r3 - memory allocated in third chunk 8491795a4d1SJed Brown 8501795a4d1SJed Brown Level: developer 8511795a4d1SJed Brown 8521795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8531795a4d1SJed Brown 8541795a4d1SJed Brown Concepts: memory allocation 8551795a4d1SJed Brown M*/ 8562553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8571795a4d1SJed Brown 8581795a4d1SJed Brown /*MC 859dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 860d382aafbSBarry Smith 861d382aafbSBarry Smith Synopsis: 862aaa7dc30SBarry Smith #include <petscsys.h> 863dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 864d382aafbSBarry Smith 865d382aafbSBarry Smith Not Collective 866d382aafbSBarry Smith 867d382aafbSBarry Smith Input Parameter: 868d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 869d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 870d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 871dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 872d382aafbSBarry Smith 873d382aafbSBarry Smith Output Parameter: 874d382aafbSBarry Smith + r1 - memory allocated in first chunk 875d382aafbSBarry Smith . r2 - memory allocated in second chunk 876d382aafbSBarry Smith . r3 - memory allocated in third chunk 877d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 878d382aafbSBarry Smith 879d382aafbSBarry Smith Level: developer 880d382aafbSBarry Smith 8811795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 882d382aafbSBarry Smith 883d382aafbSBarry Smith Concepts: memory allocation 884d382aafbSBarry Smith 885d382aafbSBarry Smith M*/ 8862553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 887d382aafbSBarry Smith 888d382aafbSBarry Smith /*MC 8891795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 890d382aafbSBarry Smith 891eca87e8dSBarry Smith Synopsis: 892aaa7dc30SBarry Smith #include <petscsys.h> 8931795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 894eca87e8dSBarry Smith 895eca87e8dSBarry Smith Not Collective 896eca87e8dSBarry Smith 897e28ce29aSPatrick Sanan Input Parameters: 898d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 899d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 900d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 9011795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 9021795a4d1SJed Brown 903e28ce29aSPatrick Sanan Output Parameters: 9041795a4d1SJed Brown + r1 - memory allocated in first chunk 9051795a4d1SJed Brown . r2 - memory allocated in second chunk 9061795a4d1SJed Brown . r3 - memory allocated in third chunk 9071795a4d1SJed Brown - r4 - memory allocated in fourth chunk 9081795a4d1SJed Brown 9091795a4d1SJed Brown Level: developer 9101795a4d1SJed Brown 9111795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 9121795a4d1SJed Brown 9131795a4d1SJed Brown Concepts: memory allocation 9141795a4d1SJed Brown 9151795a4d1SJed Brown M*/ 9162553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 9171795a4d1SJed Brown 9181795a4d1SJed Brown /*MC 919dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 920d382aafbSBarry Smith 921d382aafbSBarry Smith Synopsis: 922aaa7dc30SBarry Smith #include <petscsys.h> 923dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 924d382aafbSBarry Smith 925d382aafbSBarry Smith Not Collective 926d382aafbSBarry Smith 927e28ce29aSPatrick Sanan Input Parameters: 928d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 929d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 930d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 931d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 932dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 933d382aafbSBarry Smith 934e28ce29aSPatrick Sanan Output Parameters: 935d382aafbSBarry Smith + r1 - memory allocated in first chunk 936d382aafbSBarry Smith . r2 - memory allocated in second chunk 937d382aafbSBarry Smith . r3 - memory allocated in third chunk 938d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 939d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 940d382aafbSBarry Smith 941d382aafbSBarry Smith Level: developer 942d382aafbSBarry Smith 9431795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 944d382aafbSBarry Smith 945d382aafbSBarry Smith Concepts: memory allocation 946d382aafbSBarry Smith 947d382aafbSBarry Smith M*/ 9482553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 949d382aafbSBarry Smith 950d382aafbSBarry Smith /*MC 9511795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 952d382aafbSBarry Smith 953eca87e8dSBarry Smith Synopsis: 954aaa7dc30SBarry Smith #include <petscsys.h> 9551795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 956eca87e8dSBarry Smith 957eca87e8dSBarry Smith Not Collective 958eca87e8dSBarry Smith 959e28ce29aSPatrick Sanan Input Parameters: 960d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 961d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 962d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 963d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9641795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9651795a4d1SJed Brown 966e28ce29aSPatrick Sanan Output Parameters: 9671795a4d1SJed Brown + r1 - memory allocated in first chunk 9681795a4d1SJed Brown . r2 - memory allocated in second chunk 9691795a4d1SJed Brown . r3 - memory allocated in third chunk 9701795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9711795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9721795a4d1SJed Brown 9731795a4d1SJed Brown Level: developer 9741795a4d1SJed Brown 9751795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9761795a4d1SJed Brown 9771795a4d1SJed Brown Concepts: memory allocation 9781795a4d1SJed Brown 9791795a4d1SJed Brown M*/ 9802553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 981d382aafbSBarry Smith 982d382aafbSBarry Smith /*MC 983dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 984d382aafbSBarry Smith 985d382aafbSBarry Smith Synopsis: 986aaa7dc30SBarry Smith #include <petscsys.h> 987dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 988d382aafbSBarry Smith 989d382aafbSBarry Smith Not Collective 990d382aafbSBarry Smith 991e28ce29aSPatrick Sanan Input Parameters: 992d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 993d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 994d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 995d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 996d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 997dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 998d382aafbSBarry Smith 999e28ce29aSPatrick Sanan Output Parameteasr: 1000d382aafbSBarry Smith + r1 - memory allocated in first chunk 1001d382aafbSBarry Smith . r2 - memory allocated in second chunk 1002d382aafbSBarry Smith . r3 - memory allocated in third chunk 1003d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1004d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1005d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 1006d382aafbSBarry Smith 1007d382aafbSBarry Smith Level: developer 1008d382aafbSBarry Smith 10091795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 1010d382aafbSBarry Smith 1011d382aafbSBarry Smith Concepts: memory allocation 1012d382aafbSBarry Smith 1013d382aafbSBarry Smith M*/ 10142553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 1015d382aafbSBarry Smith 1016d382aafbSBarry Smith /*MC 10171795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 1018d382aafbSBarry Smith 1019eca87e8dSBarry Smith Synopsis: 1020aaa7dc30SBarry Smith #include <petscsys.h> 10211795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 1022eca87e8dSBarry Smith 1023eca87e8dSBarry Smith Not Collective 1024eca87e8dSBarry Smith 1025e28ce29aSPatrick Sanan Input Parameters: 1026d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1027d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1028d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1029d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1030d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 10311795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 10321795a4d1SJed Brown 1033e28ce29aSPatrick Sanan Output Parameters: 10341795a4d1SJed Brown + r1 - memory allocated in first chunk 10351795a4d1SJed Brown . r2 - memory allocated in second chunk 10361795a4d1SJed Brown . r3 - memory allocated in third chunk 10371795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10381795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10391795a4d1SJed Brown - r6 - memory allocated in sixth chunk 10401795a4d1SJed Brown 10411795a4d1SJed Brown Level: developer 10421795a4d1SJed Brown 10431795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 10441795a4d1SJed Brown 10451795a4d1SJed Brown Concepts: memory allocation 10461795a4d1SJed Brown M*/ 10472553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 10481795a4d1SJed Brown 10491795a4d1SJed Brown /*MC 1050dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 1051d382aafbSBarry Smith 1052d382aafbSBarry Smith Synopsis: 1053aaa7dc30SBarry Smith #include <petscsys.h> 1054dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1055d382aafbSBarry Smith 1056d382aafbSBarry Smith Not Collective 1057d382aafbSBarry Smith 1058e28ce29aSPatrick Sanan Input Parameters: 1059d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1060d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1061d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1062d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1063d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1064d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1065dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1066d382aafbSBarry Smith 1067e28ce29aSPatrick Sanan Output Parameters: 1068d382aafbSBarry Smith + r1 - memory allocated in first chunk 1069d382aafbSBarry Smith . r2 - memory allocated in second chunk 1070d382aafbSBarry Smith . r3 - memory allocated in third chunk 1071d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1072d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1073d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1074eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1075d382aafbSBarry Smith 1076d382aafbSBarry Smith Level: developer 1077d382aafbSBarry Smith 10781795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1079d382aafbSBarry Smith 1080d382aafbSBarry Smith Concepts: memory allocation 1081d382aafbSBarry Smith 1082d382aafbSBarry Smith M*/ 10832553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1084d382aafbSBarry Smith 1085d382aafbSBarry Smith /*MC 10861795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10871795a4d1SJed Brown 10881795a4d1SJed Brown Synopsis: 1089aaa7dc30SBarry Smith #include <petscsys.h> 10901795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10911795a4d1SJed Brown 10921795a4d1SJed Brown Not Collective 10931795a4d1SJed Brown 1094e28ce29aSPatrick Sanan Input Parameters: 10951795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10961795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10971795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10981795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10991795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 11001795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 11011795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 11021795a4d1SJed Brown 1103e28ce29aSPatrick Sanan Output Parameters: 11041795a4d1SJed Brown + r1 - memory allocated in first chunk 11051795a4d1SJed Brown . r2 - memory allocated in second chunk 11061795a4d1SJed Brown . r3 - memory allocated in third chunk 11071795a4d1SJed Brown . r4 - memory allocated in fourth chunk 11081795a4d1SJed Brown . r5 - memory allocated in fifth chunk 11091795a4d1SJed Brown . r6 - memory allocated in sixth chunk 11101795a4d1SJed Brown - r7 - memory allocated in seventh chunk 11111795a4d1SJed Brown 11121795a4d1SJed Brown Level: developer 11131795a4d1SJed Brown 11141795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 11151795a4d1SJed Brown 11161795a4d1SJed Brown Concepts: memory allocation 11171795a4d1SJed Brown M*/ 11182553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 11191795a4d1SJed Brown 11201795a4d1SJed Brown /*MC 1121503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1122d382aafbSBarry Smith 1123eca87e8dSBarry Smith Synopsis: 1124aaa7dc30SBarry Smith #include <petscsys.h> 1125b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1126eca87e8dSBarry Smith 1127eca87e8dSBarry Smith Not Collective 1128eca87e8dSBarry Smith 1129d382aafbSBarry Smith Output Parameter: 1130b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1131d382aafbSBarry Smith 1132d382aafbSBarry Smith Level: beginner 1133d382aafbSBarry Smith 1134390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1135d382aafbSBarry Smith 1136d382aafbSBarry Smith Concepts: memory allocation 1137d382aafbSBarry Smith 1138d382aafbSBarry Smith M*/ 1139b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1140ad0619ddSBarry Smith 1141ad0619ddSBarry Smith /*MC 1142b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1143ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1144ad0619ddSBarry Smith 1145ad0619ddSBarry Smith Synopsis: 1146aaa7dc30SBarry Smith #include <petscsys.h> 1147b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1148ad0619ddSBarry Smith 1149ad0619ddSBarry Smith Not Collective 1150ad0619ddSBarry Smith 1151ad0619ddSBarry Smith Input Parameter: 1152b00a9115SJed Brown . obj - object memory is logged to 1153ad0619ddSBarry Smith 1154ad0619ddSBarry Smith Output Parameter: 1155b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1156ad0619ddSBarry Smith 1157ad0619ddSBarry Smith Level: developer 1158ad0619ddSBarry Smith 1159390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1160ad0619ddSBarry Smith 1161ad0619ddSBarry Smith Concepts: memory allocation 1162ad0619ddSBarry Smith 1163ad0619ddSBarry Smith M*/ 1164d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1165d382aafbSBarry Smith 1166d382aafbSBarry Smith /*MC 1167d382aafbSBarry Smith PetscFree - Frees memory 1168d382aafbSBarry Smith 1169eca87e8dSBarry Smith Synopsis: 1170aaa7dc30SBarry Smith #include <petscsys.h> 1171eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1172eca87e8dSBarry Smith 1173eca87e8dSBarry Smith Not Collective 1174eca87e8dSBarry Smith 1175d382aafbSBarry Smith Input Parameter: 1176390e1bf2SBarry Smith . memory - memory to free (the pointer is ALWAYS set to NULL upon sucess) 1177d382aafbSBarry Smith 1178d382aafbSBarry Smith Level: beginner 1179d382aafbSBarry Smith 118049d7da52SJed Brown Notes: 1181390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1182390e1bf2SBarry Smith 118349d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1184d382aafbSBarry Smith 1185390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1186d382aafbSBarry Smith 1187d382aafbSBarry Smith Concepts: memory allocation 1188d382aafbSBarry Smith 1189d382aafbSBarry Smith M*/ 119049d7da52SJed Brown #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0)) 1191d382aafbSBarry Smith 1192d382aafbSBarry Smith /*MC 1193d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1194d382aafbSBarry Smith 1195eca87e8dSBarry Smith Synopsis: 1196aaa7dc30SBarry Smith #include <petscsys.h> 1197eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1198eca87e8dSBarry Smith 1199eca87e8dSBarry Smith Not Collective 1200eca87e8dSBarry Smith 1201e28ce29aSPatrick Sanan Input Parameters: 1202d382aafbSBarry Smith + memory1 - memory to free 1203d382aafbSBarry Smith - memory2 - 2nd memory to free 1204d382aafbSBarry Smith 1205d382aafbSBarry Smith Level: developer 1206d382aafbSBarry Smith 120795452b02SPatrick Sanan Notes: 120895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1209d382aafbSBarry Smith 1210d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1211d382aafbSBarry Smith 1212d382aafbSBarry Smith Concepts: memory allocation 1213d382aafbSBarry Smith 1214d382aafbSBarry Smith M*/ 1215ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1216d382aafbSBarry Smith 1217d382aafbSBarry Smith /*MC 1218d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1219d382aafbSBarry Smith 1220eca87e8dSBarry Smith Synopsis: 1221aaa7dc30SBarry Smith #include <petscsys.h> 1222eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1223eca87e8dSBarry Smith 1224eca87e8dSBarry Smith Not Collective 1225eca87e8dSBarry Smith 1226e28ce29aSPatrick Sanan Input Parameters: 1227d382aafbSBarry Smith + memory1 - memory to free 1228d382aafbSBarry Smith . memory2 - 2nd memory to free 1229d382aafbSBarry Smith - memory3 - 3rd memory to free 1230d382aafbSBarry Smith 1231d382aafbSBarry Smith Level: developer 1232d382aafbSBarry Smith 123395452b02SPatrick Sanan Notes: 123495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1237d382aafbSBarry Smith 1238d382aafbSBarry Smith Concepts: memory allocation 1239d382aafbSBarry Smith 1240d382aafbSBarry Smith M*/ 1241ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1242d382aafbSBarry Smith 1243d382aafbSBarry Smith /*MC 1244d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1245d382aafbSBarry Smith 1246eca87e8dSBarry Smith Synopsis: 1247aaa7dc30SBarry Smith #include <petscsys.h> 1248eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1249eca87e8dSBarry Smith 1250eca87e8dSBarry Smith Not Collective 1251eca87e8dSBarry Smith 1252e28ce29aSPatrick Sanan Input Parameters: 1253d382aafbSBarry Smith + m1 - memory to free 1254d382aafbSBarry Smith . m2 - 2nd memory to free 1255d382aafbSBarry Smith . m3 - 3rd memory to free 1256d382aafbSBarry Smith - m4 - 4th memory to free 1257d382aafbSBarry Smith 1258d382aafbSBarry Smith Level: developer 1259d382aafbSBarry Smith 126095452b02SPatrick Sanan Notes: 126195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1262d382aafbSBarry Smith 1263d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1264d382aafbSBarry Smith 1265d382aafbSBarry Smith Concepts: memory allocation 1266d382aafbSBarry Smith 1267d382aafbSBarry Smith M*/ 1268ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1269d382aafbSBarry Smith 1270d382aafbSBarry Smith /*MC 1271d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1272d382aafbSBarry Smith 1273eca87e8dSBarry Smith Synopsis: 1274aaa7dc30SBarry Smith #include <petscsys.h> 1275eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1276eca87e8dSBarry Smith 1277eca87e8dSBarry Smith Not Collective 1278eca87e8dSBarry Smith 1279e28ce29aSPatrick Sanan Input Parameters: 1280d382aafbSBarry Smith + m1 - memory to free 1281d382aafbSBarry Smith . m2 - 2nd memory to free 1282d382aafbSBarry Smith . m3 - 3rd memory to free 1283d382aafbSBarry Smith . m4 - 4th memory to free 1284d382aafbSBarry Smith - m5 - 5th memory to free 1285d382aafbSBarry Smith 1286d382aafbSBarry Smith Level: developer 1287d382aafbSBarry Smith 128895452b02SPatrick Sanan Notes: 128995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1290d382aafbSBarry Smith 1291d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1292d382aafbSBarry Smith 1293d382aafbSBarry Smith Concepts: memory allocation 1294d382aafbSBarry Smith 1295d382aafbSBarry Smith M*/ 1296ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1297d382aafbSBarry Smith 1298d382aafbSBarry Smith /*MC 1299d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1300d382aafbSBarry Smith 1301eca87e8dSBarry Smith Synopsis: 1302aaa7dc30SBarry Smith #include <petscsys.h> 1303eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1304eca87e8dSBarry Smith 1305eca87e8dSBarry Smith Not Collective 1306eca87e8dSBarry Smith 1307e28ce29aSPatrick Sanan Input Parameters: 1308d382aafbSBarry Smith + m1 - memory to free 1309d382aafbSBarry Smith . m2 - 2nd memory to free 1310d382aafbSBarry Smith . m3 - 3rd memory to free 1311d382aafbSBarry Smith . m4 - 4th memory to free 1312d382aafbSBarry Smith . m5 - 5th memory to free 1313d382aafbSBarry Smith - m6 - 6th memory to free 1314d382aafbSBarry Smith 1315d382aafbSBarry Smith 1316d382aafbSBarry Smith Level: developer 1317d382aafbSBarry Smith 131895452b02SPatrick Sanan Notes: 131995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1320d382aafbSBarry Smith 1321d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1322d382aafbSBarry Smith 1323d382aafbSBarry Smith Concepts: memory allocation 1324d382aafbSBarry Smith 1325d382aafbSBarry Smith M*/ 1326ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1327d382aafbSBarry Smith 1328d382aafbSBarry Smith /*MC 1329d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1330d382aafbSBarry Smith 1331eca87e8dSBarry Smith Synopsis: 1332aaa7dc30SBarry Smith #include <petscsys.h> 1333eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1334eca87e8dSBarry Smith 1335eca87e8dSBarry Smith Not Collective 1336eca87e8dSBarry Smith 1337e28ce29aSPatrick Sanan Input Parameters: 1338d382aafbSBarry Smith + m1 - memory to free 1339d382aafbSBarry Smith . m2 - 2nd memory to free 1340d382aafbSBarry Smith . m3 - 3rd memory to free 1341d382aafbSBarry Smith . m4 - 4th memory to free 1342d382aafbSBarry Smith . m5 - 5th memory to free 1343d382aafbSBarry Smith . m6 - 6th memory to free 1344d382aafbSBarry Smith - m7 - 7th memory to free 1345d382aafbSBarry Smith 1346d382aafbSBarry Smith 1347d382aafbSBarry Smith Level: developer 1348d382aafbSBarry Smith 134995452b02SPatrick Sanan Notes: 135095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1351d382aafbSBarry Smith 1352d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1353d382aafbSBarry Smith PetscMalloc7() 1354d382aafbSBarry Smith 1355d382aafbSBarry Smith Concepts: memory allocation 1356d382aafbSBarry Smith 1357d382aafbSBarry Smith M*/ 1358ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1359d382aafbSBarry Smith 1360ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1361ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1362efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**); 1363efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 13643221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1365ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 1366efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[])); 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1368d382aafbSBarry Smith 1369d382aafbSBarry Smith /* 1370c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1371c1706be6SHong Zhang */ 1372c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1373c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 1374c1706be6SHong Zhang 1375c1706be6SHong Zhang /* 1376a5057860SBarry Smith PetscLogDouble variables are used to contain double precision numbers 1377a5057860SBarry Smith that are not used in the numerical computations, but rather in logging, 1378a5057860SBarry Smith timing etc. 1379a5057860SBarry Smith */ 1380a5057860SBarry Smith typedef double PetscLogDouble; 1381a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 1382a5057860SBarry Smith 1383a5057860SBarry Smith /* 138466d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1385d382aafbSBarry Smith */ 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 13910acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*); 1392efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1394574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble); 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1396d382aafbSBarry Smith 1397d382aafbSBarry Smith /*E 1398d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1399d382aafbSBarry Smith 1400d382aafbSBarry Smith Level: beginner 1401d382aafbSBarry Smith 1402e8a7dd7fSJed Brown Notes: 1403e8a7dd7fSJed Brown Use of this should be avoided if one can directly use MPI_Datatype instead. 140494fbd55eSBarry Smith 1405e28ce29aSPatrick Sanan Developer comment: 1406e28ce29aSPatrick Sanan It would be nice if we could always just use MPI Datatypes, why can we not? 1407d382aafbSBarry Smith 1408d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1409d382aafbSBarry Smith PetscDataTypeGetSize() 1410d382aafbSBarry Smith 1411d382aafbSBarry Smith E*/ 1412d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 1413570b7f6dSBarry Smith PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12, PETSC_STRING = 13, PETSC___FP16 = 14,PETSC_STRUCT, PETSC_DATATYPE_UNKNOWN} PetscDataType; 14146a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1415d382aafbSBarry Smith 1416d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1417d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1418d382aafbSBarry Smith #else 1419ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1420d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 142159a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 142259a34000SBarry Smith #define PETSC_SCALAR PETSC___FLOAT128 1423570b7f6dSBarry Smith #elif defined(PETSC_USE_REAL___FP16) 1424570b7f6dSBarry Smith #define PETSC_SCALAR PETSC___FP16 1425d382aafbSBarry Smith #else 1426d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1427d382aafbSBarry Smith #endif 1428d382aafbSBarry Smith #endif 1429ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1430d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 143159a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 143259a34000SBarry Smith #define PETSC_REAL PETSC___FLOAT128 1433570b7f6dSBarry Smith #elif defined(PETSC_USE_REAL___FP16) 1434570b7f6dSBarry Smith #define PETSC_REAL PETSC___FP16 1435d382aafbSBarry Smith #else 1436d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1437d382aafbSBarry Smith #endif 1438d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1439d382aafbSBarry Smith 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 14438e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1444d382aafbSBarry Smith 1445d382aafbSBarry Smith /* 1446d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1447d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1448d382aafbSBarry Smith functionality and/or error checking. 1449d382aafbSBarry Smith */ 1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1454d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1462a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 14662f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 14712c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 147447340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 14756fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 14766991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 14776991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1479d382aafbSBarry Smith 1480573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1481573b0fb4SBarry Smith 1482d382aafbSBarry Smith /*S 1483d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1484d382aafbSBarry Smith 1485d382aafbSBarry Smith Level: intermediate 1486d382aafbSBarry Smith 1487d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1488d382aafbSBarry Smith S*/ 1489d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1490d382aafbSBarry Smith 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 14948e81d068SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1495d382aafbSBarry Smith 1496a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1497a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1498a53986e1SJed Brown 1499d382aafbSBarry Smith /* 1500d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1501d382aafbSBarry Smith */ 1502367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1503570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1504014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 15052414b3c7SJed Brown #else 15062414b3c7SJed Brown #define MPIU_SUM MPI_SUM 15072414b3c7SJed Brown #endif 1508570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1509014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1510014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1511d9822059SBarry Smith #else 1512d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1513d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1514d9822059SBarry Smith #endif 1515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1516d382aafbSBarry Smith 1517014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1518014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1519eb3f98d2SBarry Smith 1520d382aafbSBarry Smith /*S 1521d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1522d382aafbSBarry Smith 1523d382aafbSBarry Smith Level: beginner 1524d382aafbSBarry Smith 1525e28ce29aSPatrick Sanan Note: 1526e28ce29aSPatrick Sanan This is the base class from which all PETSc objects are derived from. 1527d382aafbSBarry Smith 15282b26979fSBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereference() 1529d382aafbSBarry Smith S*/ 1530d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1531d382aafbSBarry Smith 1532270bf2e7SJed Brown /*MC 1533127c8a3bSJed Brown PetscObjectId - unique integer Id for a PetscObject 1534127c8a3bSJed Brown 1535127c8a3bSJed Brown Level: developer 1536127c8a3bSJed Brown 1537e28ce29aSPatrick Sanan Notes: 1538e28ce29aSPatrick Sanan Unlike pointer values, object ids are never reused. 1539127c8a3bSJed Brown 1540127c8a3bSJed Brown .seealso: PetscObjectState, PetscObjectGetId() 1541127c8a3bSJed Brown M*/ 154206e41213SSatish Balay #if defined(PETSC_USING_F90) && !defined(PETSC_USE_FORTRANKIND) /* compaq F90 */ 154306e41213SSatish Balay typedef int PetscObjectId; 154406e41213SSatish Balay #else 1545bafee8b4SSatish Balay typedef PetscInt64 PetscObjectId; 154606e41213SSatish Balay #endif 1547127c8a3bSJed Brown 1548127c8a3bSJed Brown /*MC 1549270bf2e7SJed Brown PetscObjectState - integer state for a PetscObject 1550270bf2e7SJed Brown 1551270bf2e7SJed Brown Level: developer 1552270bf2e7SJed Brown 1553270bf2e7SJed Brown Notes: 1554270bf2e7SJed Brown Object state is always-increasing and (for objects that track state) can be used to determine if an object has 1555270bf2e7SJed Brown changed since the last time you interacted with it. It is 64-bit so that it will not overflow for a very long time. 1556270bf2e7SJed Brown 15578dcff661SJed Brown .seealso: PetscObjectId, PetscObjectStateGet(), PetscObjectStateIncrease(), PetscObjectStateSet() 1558270bf2e7SJed Brown M*/ 155906e41213SSatish Balay #if defined(PETSC_USING_F90) && !defined(PETSC_USE_FORTRANKIND) /* compaq F90 */ 156006e41213SSatish Balay typedef int PetscObjectState; 156106e41213SSatish Balay #else 1562bafee8b4SSatish Balay typedef PetscInt64 PetscObjectState; 156306e41213SSatish Balay #endif 1564270bf2e7SJed Brown 1565d382aafbSBarry Smith /*S 1566140e18c1SBarry Smith PetscFunctionList - Linked list of functions, possibly stored in dynamic libraries, accessed 1567d382aafbSBarry Smith by string name 1568d382aafbSBarry Smith 1569d382aafbSBarry Smith Level: advanced 1570d382aafbSBarry Smith 1571140e18c1SBarry Smith .seealso: PetscFunctionListAdd(), PetscFunctionListDestroy(), PetscOpFlist 1572d382aafbSBarry Smith S*/ 1573140e18c1SBarry Smith typedef struct _n_PetscFunctionList *PetscFunctionList; 1574d382aafbSBarry Smith 1575d382aafbSBarry Smith /*E 1576d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1577d382aafbSBarry Smith 1578d382aafbSBarry Smith Level: beginner 1579d382aafbSBarry Smith 15801cc8b206SBarry Smith $ FILE_MODE_READ - open a file at its beginning for reading 15811cc8b206SBarry Smith $ FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 15821cc8b206SBarry Smith $ FILE_MODE_APPEND - open a file at end for writing 15831cc8b206SBarry Smith $ FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 15841cc8b206SBarry Smith $ FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1585d382aafbSBarry Smith 1586d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1587d382aafbSBarry Smith E*/ 1588d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1589*95c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1590d6a4318aSJed Brown 1591639ff905SBarry Smith /* 1592639ff905SBarry Smith Defines PETSc error handling. 1593639ff905SBarry Smith */ 1594639ff905SBarry Smith #include <petscerror.h> 1595d382aafbSBarry Smith 15960700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1597014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1598014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1600d382aafbSBarry Smith 1601d382aafbSBarry Smith /* 1602d382aafbSBarry Smith Routines that get memory usage information from the OS 1603d382aafbSBarry Smith */ 1604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1607b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1608d382aafbSBarry Smith 1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1611d382aafbSBarry Smith 1612d382aafbSBarry Smith /* 1613d382aafbSBarry Smith Initialization of PETSc 1614d382aafbSBarry Smith */ 1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1625d382aafbSBarry Smith 1626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1627607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1628d382aafbSBarry Smith 1629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1632014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1633d382aafbSBarry Smith 1634d382aafbSBarry Smith /* 1635d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 16362981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1637d382aafbSBarry Smith */ 1638638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1639638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1640638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1641d382aafbSBarry Smith 1642d382aafbSBarry Smith /* 1643d382aafbSBarry Smith Functions that can act on any PETSc object. 1644d382aafbSBarry Smith */ 1645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1655014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1656014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1660014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1662014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1663bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1664bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1665014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1666014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 16670eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 16680eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1669014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1670d382aafbSBarry Smith 1671665c2dedSJed Brown #include <petscviewertypes.h> 1672639ff905SBarry Smith #include <petscoptions.h> 1673639ff905SBarry Smith 16740633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 16750633abcbSJed Brown 1676639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1677c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1678dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1679639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 16800005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 16810005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1686014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1687014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1688014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1689685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 16924099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1693014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1694014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1695014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1696d382aafbSBarry Smith 1697e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 16987aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1699e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1700e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1701e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1702e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1703e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1704e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1705e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1706e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1707e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 170815681b3cSBarry Smith 1709ec7429eaSBarry Smith #else 17107aab2a10SBarry Smith #define PetscSAWsBlock() 0 1711e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1712e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1713e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1714e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1715e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1716e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1717e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1718e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1719e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 172015681b3cSBarry Smith 1721ec7429eaSBarry Smith #endif 1722b90c6cbeSBarry Smith 17237d5d4d99SBarry Smith typedef void* PetscDLHandle; 1724e4d177b5SBarry Smith typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode; 172582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 172682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 172782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 17287d5d4d99SBarry Smith 17295fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1730a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 17315fe58b6fSBarry Smith #endif 17327eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1733a64a8e02SBarry Smith 1734d382aafbSBarry Smith /*S 1735140e18c1SBarry Smith PetscObjectList - Linked list of PETSc objects, each accessable by string name 1736d382aafbSBarry Smith 17371d0fab5eSBarry Smith Level: developer 1738d382aafbSBarry Smith 1739e28ce29aSPatrick Sanan Notes: 1740e28ce29aSPatrick Sanan Used by PetscObjectCompose() and PetscObjectQuery() 17411d0fab5eSBarry Smith 1742140e18c1SBarry Smith .seealso: PetscObjectListAdd(), PetscObjectListDestroy(), PetscObjectListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFunctionList 1743d382aafbSBarry Smith S*/ 1744140e18c1SBarry Smith typedef struct _n_PetscObjectList *PetscObjectList; 1745d382aafbSBarry Smith 1746140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1747140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1748140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1749140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1750140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1751140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1752d382aafbSBarry Smith 1753d382aafbSBarry Smith /* 1754503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1755d382aafbSBarry Smith link libraries that will be loaded as needed. 1756d382aafbSBarry Smith */ 1757a240a19fSJed Brown 1758a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1759a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1760140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 17611c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 17621c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 1763140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]); 1764140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1765140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1766140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1767d382aafbSBarry Smith 1768d382aafbSBarry Smith /*S 1769d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1770d382aafbSBarry Smith 1771d382aafbSBarry Smith Level: advanced 1772d382aafbSBarry Smith 1773d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1774d382aafbSBarry Smith S*/ 1775d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1776014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1777014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1778014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1779014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1780014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1781014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1782014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1783014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1784d382aafbSBarry Smith 1785d382aafbSBarry Smith /* 1786d382aafbSBarry Smith Useful utility routines 1787d382aafbSBarry Smith */ 1788014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1789014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1790014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1791014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1792014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1793014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 17946ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 17956ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1796d382aafbSBarry Smith 1797503cfb0cSBarry Smith /* 1798ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1799503cfb0cSBarry Smith 1800e28ce29aSPatrick Sanan Notes: 1801e28ce29aSPatrick Sanan This is useful in cases like 1802503cfb0cSBarry Smith $ int *a; 1803ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 18041cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1805503cfb0cSBarry Smith */ 1806d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1807503cfb0cSBarry Smith 1808d382aafbSBarry Smith /*MC 1809d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1810d382aafbSBarry Smith 1811d382aafbSBarry Smith Synopsis: 1812aaa7dc30SBarry Smith #include <petscsys.h> 1813d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1814d382aafbSBarry Smith 1815eca87e8dSBarry Smith Not Collective 1816eca87e8dSBarry Smith 1817d382aafbSBarry Smith Input Parameters: 1818d382aafbSBarry Smith . format - the usual printf() format string 1819d382aafbSBarry Smith 1820d382aafbSBarry Smith Level: developer 1821d382aafbSBarry Smith 1822d382aafbSBarry Smith Fortran Note: 1823d382aafbSBarry Smith This routine is not supported in Fortran. 1824d382aafbSBarry Smith 1825d382aafbSBarry Smith Concepts: help messages^printing 1826d382aafbSBarry Smith Concepts: printing^help messages 1827d382aafbSBarry Smith 1828d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1829d382aafbSBarry Smith M*/ 1830014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1831d382aafbSBarry Smith 1832fcfd50ebSBarry Smith /* 1833fcfd50ebSBarry Smith Defines PETSc profiling. 1834fcfd50ebSBarry Smith */ 18352c8e378dSBarry Smith #include <petsclog.h> 1836fcfd50ebSBarry Smith 1837fcfd50ebSBarry Smith /* 1838fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1839fcfd50ebSBarry Smith */ 1840014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1841014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1842014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1843014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1844014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1845014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1846014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 18471b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1848fcfd50ebSBarry Smith 1849014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1850014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1851014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1852d382aafbSBarry Smith 1853d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1854d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1855d781fa04SBarry Smith 1856d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1857014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1858016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 185974ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1860d382aafbSBarry Smith #endif 1861d382aafbSBarry Smith 1862014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1863014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 18640ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1865014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1866014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1867014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1868014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1869d382aafbSBarry Smith 1870d382aafbSBarry Smith /*S 1871d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1872d382aafbSBarry Smith 1873d382aafbSBarry Smith Level: advanced 1874d382aafbSBarry Smith 1875d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1876d382aafbSBarry Smith S*/ 1877014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1878d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 1879014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1880014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1881014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1882014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1883014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1884b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1885d382aafbSBarry Smith 1886d382aafbSBarry Smith /* 1887d382aafbSBarry Smith For use in debuggers 1888d382aafbSBarry Smith */ 1889014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1890014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1891014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1892014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1893014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1894d382aafbSBarry Smith 1895a663daf8SBarry Smith #include <stddef.h> 1896a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1897d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1898d382aafbSBarry Smith #include <stdlib.h> 1899d382aafbSBarry Smith #endif 19006c7e564aSBarry Smith 19014a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1902d382aafbSBarry Smith #include <xmmintrin.h> 1903d382aafbSBarry Smith #endif 1904d382aafbSBarry Smith 1905d382aafbSBarry Smith /*@C 1906d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1907d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1908d382aafbSBarry Smith PetscMemmove() in that case. 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith Not Collective 1911d382aafbSBarry Smith 1912d382aafbSBarry Smith Input Parameters: 1913d382aafbSBarry Smith + b - pointer to initial memory space 1914d382aafbSBarry Smith - n - length (in bytes) of space to copy 1915d382aafbSBarry Smith 1916d382aafbSBarry Smith Output Parameter: 1917d382aafbSBarry Smith . a - pointer to copy space 1918d382aafbSBarry Smith 1919d382aafbSBarry Smith Level: intermediate 1920d382aafbSBarry Smith 1921d382aafbSBarry Smith Compile Option: 1922d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1923d382aafbSBarry Smith for memory copies on double precision values. 1924d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1925d382aafbSBarry Smith for memory copies on double precision values. 1926d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1927d382aafbSBarry Smith for memory copies on double precision values. 1928d382aafbSBarry Smith 1929d382aafbSBarry Smith Note: 1930d382aafbSBarry Smith This routine is analogous to memcpy(). 1931d382aafbSBarry Smith 19321fd49c25SBarry Smith Not available from Fortran 19331fd49c25SBarry Smith 1934f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1935f5f57ec0SBarry Smith 1936d382aafbSBarry Smith Concepts: memory^copying 1937d382aafbSBarry Smith Concepts: copying^memory 1938d382aafbSBarry Smith 19391fd49c25SBarry Smith .seealso: PetscMemmove(), PetscStrallocpy() 1940d382aafbSBarry Smith 1941d382aafbSBarry Smith @*/ 19427087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1943d382aafbSBarry Smith { 1944d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1945c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1946c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1947a7e36092SMatthew G Knepley PetscFunctionBegin; 1948e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1949e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1950a7e36092SMatthew G Knepley #else 1951d382aafbSBarry Smith PetscFunctionBegin; 1952a7e36092SMatthew G Knepley #endif 1953a47a537aSLisandro Dalcin if (a != b && n > 0) { 1954d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1955e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1956d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1957d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1958d382aafbSBarry Smith #endif 1959d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1960c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1961d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1962d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1963c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1964c5df96a5SBarry Smith PetscErrorCode ierr; 1965c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 19668b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1967d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1968d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1969d382aafbSBarry Smith #else 1970d382aafbSBarry Smith size_t i; 1971d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1972d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1973d382aafbSBarry Smith #endif 1974d382aafbSBarry Smith } else { 1975d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1976d382aafbSBarry Smith } 1977d382aafbSBarry Smith #else 1978d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1979d382aafbSBarry Smith #endif 1980d382aafbSBarry Smith } 1981d382aafbSBarry Smith PetscFunctionReturn(0); 1982d382aafbSBarry Smith } 1983d382aafbSBarry Smith 1984d382aafbSBarry Smith /*@C 1985d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1986d382aafbSBarry Smith 1987d382aafbSBarry Smith Not Collective 1988d382aafbSBarry Smith 1989d382aafbSBarry Smith Input Parameters: 1990d382aafbSBarry Smith + a - pointer to beginning memory location 1991d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1992d382aafbSBarry Smith 1993d382aafbSBarry Smith Level: intermediate 1994d382aafbSBarry Smith 1995d382aafbSBarry Smith Compile Option: 1996d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1997d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1998d382aafbSBarry Smith 19991fd49c25SBarry Smith Not available from Fortran 20001fd49c25SBarry Smith 2001503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 2002503cfb0cSBarry Smith 2003d382aafbSBarry Smith Concepts: memory^zeroing 2004d382aafbSBarry Smith Concepts: zeroing^memory 2005d382aafbSBarry Smith 2006d382aafbSBarry Smith .seealso: PetscMemcpy() 2007d382aafbSBarry Smith @*/ 20087087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 2009d382aafbSBarry Smith { 2010d382aafbSBarry Smith if (n > 0) { 2011d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 2012e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 2013d382aafbSBarry Smith #endif 2014d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 2015d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 2016d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 2017d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 2018d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 2019d382aafbSBarry Smith } else { 2020d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 2021d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 2022d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 2023d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 2024d382aafbSBarry Smith } else { 2025d382aafbSBarry Smith #endif 2026d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 2027d382aafbSBarry Smith bzero((char *)a,n); 2028d382aafbSBarry Smith #else 2029d382aafbSBarry Smith memset((char*)a,0,n); 2030d382aafbSBarry Smith #endif 2031d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 2032d382aafbSBarry Smith } 2033d382aafbSBarry Smith #endif 2034d382aafbSBarry Smith } 2035d382aafbSBarry Smith return 0; 2036d382aafbSBarry Smith } 2037d382aafbSBarry Smith 2038d382aafbSBarry Smith /*MC 2039d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 2040d382aafbSBarry Smith 2041eca87e8dSBarry Smith Synopsis: 2042aaa7dc30SBarry Smith #include <petscsys.h> 2043eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 2044eca87e8dSBarry Smith 2045d382aafbSBarry Smith Not Collective 2046d382aafbSBarry Smith 2047d382aafbSBarry Smith Input Parameters: 2048d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 2049d382aafbSBarry Smith . n - number of elements to fetch 2050d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 205150d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2052d382aafbSBarry Smith 2053d382aafbSBarry Smith Level: developer 2054d382aafbSBarry Smith 2055d382aafbSBarry Smith Notes: 2056d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2057d382aafbSBarry Smith 205850d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 205950d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 206050d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 206163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 206263cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 206363cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2064d382aafbSBarry Smith 2065d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2066d382aafbSBarry Smith address). 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith Concepts: memory 2069d382aafbSBarry Smith M*/ 2070d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2071d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2072d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2073d382aafbSBarry Smith } while (0) 2074d382aafbSBarry Smith 2075d382aafbSBarry Smith /* 2076d382aafbSBarry Smith Determine if some of the kernel computation routines use 2077d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2078d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2079d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2080e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2081d382aafbSBarry Smith */ 2082d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2083d382aafbSBarry Smith 2084d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2085d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2086d382aafbSBarry Smith #endif 2087d382aafbSBarry Smith 20885a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20895a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2090d382aafbSBarry Smith #endif 2091d382aafbSBarry Smith 2092d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2093d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2094d382aafbSBarry Smith #endif 2095d382aafbSBarry Smith 2096d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2097d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2098d382aafbSBarry Smith #endif 2099d382aafbSBarry Smith 2100d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2101d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2102d382aafbSBarry Smith #endif 2103d382aafbSBarry Smith 2104d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2105d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2106d382aafbSBarry Smith #endif 2107d382aafbSBarry Smith 2108d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2109d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2110d382aafbSBarry Smith #endif 2111d382aafbSBarry Smith 2112d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2113d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2114d382aafbSBarry Smith #endif 2115d382aafbSBarry Smith 2116d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2117d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2118d382aafbSBarry Smith #endif 2119d382aafbSBarry Smith 2120d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2121d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2122d382aafbSBarry Smith #endif 2123d382aafbSBarry Smith 2124d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2125d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2126d382aafbSBarry Smith #endif 2127d382aafbSBarry Smith 2128d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2129d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2130d382aafbSBarry Smith #endif 2131d382aafbSBarry Smith 2132d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2133d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2134d382aafbSBarry Smith #endif 2135d382aafbSBarry Smith 2136d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2137d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2138d382aafbSBarry Smith #endif 2139d382aafbSBarry Smith 2140d382aafbSBarry Smith #endif 2141d382aafbSBarry Smith 2142d382aafbSBarry Smith /* 2143d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2144d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2145d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2146d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2147d382aafbSBarry Smith ugly extern "C" {} wrappers. 2148d382aafbSBarry Smith */ 2149d382aafbSBarry Smith #if defined(__cplusplus) 2150d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 2151d382aafbSBarry Smith #define EXTERN_C_END } 2152d382aafbSBarry Smith #else 2153d382aafbSBarry Smith #define EXTERN_C_BEGIN 2154d382aafbSBarry Smith #define EXTERN_C_END 2155d382aafbSBarry Smith #endif 2156d382aafbSBarry Smith 2157d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2158d382aafbSBarry Smith 2159d382aafbSBarry Smith /*MC 2160d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2161d382aafbSBarry Smith communication 2162d382aafbSBarry Smith 2163d382aafbSBarry Smith Level: beginner 2164d382aafbSBarry Smith 2165d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2166d382aafbSBarry Smith 2167d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2168d382aafbSBarry Smith M*/ 2169d382aafbSBarry Smith 2170d382aafbSBarry Smith /*MC 2171d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 2172390e1bf2SBarry Smith complex number, a single precision real number, a __float128 real or complex or a __fp16 real - if the code is configured 2173390e1bf2SBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,__float128,__fp16 2174390e1bf2SBarry Smith 2175e28ce29aSPatrick Sanan Notes: 2176e28ce29aSPatrick Sanan For MPI calls that require datatypes, use MPIU_SCALAR as the datatype for PetscScalar and MPIU_SUM, MPIU_MAX etc for operations. They will automatically work correctly regardless of the size of PetscScalar. 2177d382aafbSBarry Smith 2178d382aafbSBarry Smith Level: beginner 2179d382aafbSBarry Smith 218059479656SBarry Smith .seealso: PetscReal, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT, PetscRealPart(), PetscImaginaryPart() 2181d382aafbSBarry Smith M*/ 2182d382aafbSBarry Smith 2183d382aafbSBarry Smith /*MC 21848619c96cSJed Brown PetscComplex - PETSc type that represents a complex number with precision matching that of PetscReal. 21858619c96cSJed Brown 21868619c96cSJed Brown Synopsis: 21878619c96cSJed Brown #include <petscsys.h> 21888619c96cSJed Brown PetscComplex number = 1. + 2.*PETSC_i; 21898619c96cSJed Brown 2190e28ce29aSPatrick Sanan Notes: 2191e28ce29aSPatrick Sanan For MPI calls that require datatypes, use MPIU_COMPLEX as the datatype for PetscComplex and MPIU_SUM etc for operations. 2192e28ce29aSPatrick Sanan They will automatically work correctly regardless of the size of PetscComplex. 2193390e1bf2SBarry Smith 2194390e1bf2SBarry Smith See PetscScalar for details on how to ./configure the size of PetscReal 2195390e1bf2SBarry Smith 21968cd53115SBarry Smith Complex numbers are automatically available if PETSc was able to find a working complex implementation 21978619c96cSJed Brown 2198e28ce29aSPatrick Sanan Level: beginner 2199e28ce29aSPatrick Sanan 2200e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT, PETSC_i 22018619c96cSJed Brown M*/ 22028619c96cSJed Brown 22038619c96cSJed Brown /*MC 2204d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 2205d382aafbSBarry Smith 2206e28ce29aSPatrick Sanan 2207e28ce29aSPatrick Sanan Notes: 2208e28ce29aSPatrick Sanan For MPI calls that require datatypes, use MPIU_REAL as the datatype for PetscScalar and MPIU_SUM, MPIU_MAX, etc. for operations. 2209e28ce29aSPatrick Sanan They will automatically work correctly regardless of the size of PetscReal. 2210e28ce29aSPatrick Sanan 2211e28ce29aSPatrick Sanan See PetscScalar for details on how to ./configure the size of PetscReal. 2212e28ce29aSPatrick Sanan 2213d382aafbSBarry Smith Level: beginner 2214d382aafbSBarry Smith 2215e28ce29aSPatrick Sanan .seealso: PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT 2216d382aafbSBarry Smith M*/ 2217d382aafbSBarry Smith 2218d382aafbSBarry Smith /*MC 2219d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2220d382aafbSBarry Smith 2221e28ce29aSPatrick Sanan Notes: 2222e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalar values, pass this value. 2223e28ce29aSPatrick Sanan 2224d382aafbSBarry Smith Level: beginner 2225d382aafbSBarry Smith 2226e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_COMPLEX, MPIU_INT 2227e28ce29aSPatrick Sanan M*/ 2228d382aafbSBarry Smith 2229e28ce29aSPatrick Sanan /*MC 2230e28ce29aSPatrick Sanan MPIU_COMPLEX - MPI datatype corresponding to PetscComplex 2231e28ce29aSPatrick Sanan 2232e28ce29aSPatrick Sanan Notes: 2233e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscComplex or array of PetscComplex values, pass this value. 2234e28ce29aSPatrick Sanan 2235e28ce29aSPatrick Sanan Level: beginner 2236e28ce29aSPatrick Sanan 2237e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT, PETSC_i 2238e28ce29aSPatrick Sanan M*/ 2239e28ce29aSPatrick Sanan 2240e28ce29aSPatrick Sanan /*MC 2241e28ce29aSPatrick Sanan MPIU_REAL - MPI datatype corresponding to PetscReal 2242e28ce29aSPatrick Sanan 2243e28ce29aSPatrick Sanan Notes: 2244e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscReal or array of PetscReal values, pass this value. 2245e28ce29aSPatrick Sanan 2246e28ce29aSPatrick Sanan Level: beginner 2247e28ce29aSPatrick Sanan 2248e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT 2249d382aafbSBarry Smith M*/ 2250d382aafbSBarry Smith 2251d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2252d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2253014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2254014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2255d382aafbSBarry Smith #else 2256d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2257d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2258d382aafbSBarry Smith #endif 2259d382aafbSBarry Smith #endif 2260d382aafbSBarry Smith 2261d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2262d382aafbSBarry Smith 2263d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2264d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2265d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2266d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2267d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2268d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2269d382aafbSBarry Smith 227061b0d812SBarry Smith /*@C 227161b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 227261b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 227361b0d812SBarry Smith 227461b0d812SBarry Smith Not Collective 227561b0d812SBarry Smith 227661b0d812SBarry Smith Input Parameter: 227761b0d812SBarry Smith . a - the PetscInt value 227861b0d812SBarry Smith 227961b0d812SBarry Smith Output Parameter: 228061b0d812SBarry Smith . b - the resulting PetscBLASInt value 228161b0d812SBarry Smith 228261b0d812SBarry Smith Level: advanced 228361b0d812SBarry Smith 22841fd49c25SBarry Smith Not available from Fortran 22851fd49c25SBarry Smith 228661b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast() 228761b0d812SBarry Smith @*/ 2288c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2289c5df96a5SBarry Smith { 2290c5df96a5SBarry Smith PetscFunctionBegin; 2291ab7117d1SBarry Smith *b = (PetscBLASInt)(a); 2292c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2293c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2294c5df96a5SBarry Smith #endif 2295c5df96a5SBarry Smith PetscFunctionReturn(0); 2296c5df96a5SBarry Smith } 2297c5df96a5SBarry Smith 229861b0d812SBarry Smith /*@C 229961b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 230061b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 230161b0d812SBarry Smith 230261b0d812SBarry Smith Not Collective 230361b0d812SBarry Smith 230461b0d812SBarry Smith Input Parameter: 230561b0d812SBarry Smith . a - the PetscInt value 230661b0d812SBarry Smith 230761b0d812SBarry Smith Output Parameter: 230861b0d812SBarry Smith . b - the resulting PetscMPIInt value 230961b0d812SBarry Smith 231061b0d812SBarry Smith Level: advanced 231161b0d812SBarry Smith 23121fd49c25SBarry Smith Not available from Fortran 23131fd49c25SBarry Smith 231461b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast() 231561b0d812SBarry Smith @*/ 23164dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 23174dc2109aSBarry Smith { 23184dc2109aSBarry Smith PetscFunctionBegin; 2319ab7117d1SBarry Smith *b = (PetscMPIInt)(a); 23204dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 23214dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 23224dc2109aSBarry Smith #endif 23234dc2109aSBarry Smith PetscFunctionReturn(0); 23244dc2109aSBarry Smith } 23254dc2109aSBarry Smith 2326bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 23272f18eb33SBarry Smith 23282f18eb33SBarry Smith /*@C 23292f18eb33SBarry Smith 23302f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 23312f18eb33SBarry Smith 23322f18eb33SBarry Smith Not Collective 23332f18eb33SBarry Smith 23342f18eb33SBarry Smith Input Parameter: 23352f18eb33SBarry Smith + a - the PetscReal value 23362f18eb33SBarry Smith - b - the second value 23372f18eb33SBarry Smith 2338390e1bf2SBarry Smith Returns: 2339390e1bf2SBarry Smith the result as a PetscInt value 23402f18eb33SBarry Smith 2341bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23422f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 23432f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23442f18eb33SBarry Smith 2345e28ce29aSPatrick Sanan Developers Note: 2346e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23472f18eb33SBarry Smith 23482f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23492f18eb33SBarry Smith 23501fd49c25SBarry Smith Not available from Fortran 23511fd49c25SBarry Smith 23522f18eb33SBarry Smith Level: advanced 23532f18eb33SBarry Smith 2354390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 23552f18eb33SBarry Smith @*/ 23562f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 23572f18eb33SBarry Smith { 2358bafee8b4SSatish Balay PetscInt64 r; 23592f18eb33SBarry Smith 2360bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 23612f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23622f18eb33SBarry Smith return (PetscInt) r; 23632f18eb33SBarry Smith } 23642f18eb33SBarry Smith 23652f18eb33SBarry Smith /*@C 23662f18eb33SBarry Smith 23672f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23682f18eb33SBarry Smith 23692f18eb33SBarry Smith Not Collective 23702f18eb33SBarry Smith 23712f18eb33SBarry Smith Input Parameter: 23722f18eb33SBarry Smith + a - the PetscInt value 23732f18eb33SBarry Smith - b - the second value 23742f18eb33SBarry Smith 2375390e1bf2SBarry Smith Returns: 2376390e1bf2SBarry Smith the result as a PetscInt value 23772f18eb33SBarry Smith 2378bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23792f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23802f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23812f18eb33SBarry Smith 23821fd49c25SBarry Smith Not available from Fortran 23831fd49c25SBarry Smith 23842f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23852f18eb33SBarry Smith 23862f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23872f18eb33SBarry Smith 23882f18eb33SBarry Smith Level: advanced 23892f18eb33SBarry Smith 2390390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 23912f18eb33SBarry Smith @*/ 23922f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23932f18eb33SBarry Smith { 2394bafee8b4SSatish Balay PetscInt64 r; 23952f18eb33SBarry Smith 2396bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23972f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23982f18eb33SBarry Smith return (PetscInt) r; 23992f18eb33SBarry Smith } 24002f18eb33SBarry Smith 2401f91af8c7SBarry Smith /*@C 2402f91af8c7SBarry Smith 2403f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2404f91af8c7SBarry Smith 2405f91af8c7SBarry Smith Not Collective 2406f91af8c7SBarry Smith 2407f91af8c7SBarry Smith Input Parameter: 2408f91af8c7SBarry Smith + a - the PetscInt value 2409f91af8c7SBarry Smith - b - the second value 2410f91af8c7SBarry Smith 2411390e1bf2SBarry Smith Returns: 2412390e1bf2SBarry Smith the result as a PetscInt value 2413f91af8c7SBarry Smith 2414bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2415f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2416f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2417f91af8c7SBarry Smith 2418f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2419f91af8c7SBarry Smith 2420f5f57ec0SBarry Smith Not available from Fortran 2421f5f57ec0SBarry Smith 2422f91af8c7SBarry Smith Level: advanced 2423f91af8c7SBarry Smith 2424390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2425f91af8c7SBarry Smith @*/ 2426f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2427f91af8c7SBarry Smith { 2428bafee8b4SSatish Balay PetscInt64 r; 2429f91af8c7SBarry Smith 2430bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2431f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2432f91af8c7SBarry Smith return (PetscInt) r; 2433f91af8c7SBarry Smith } 2434f91af8c7SBarry Smith 24352f18eb33SBarry Smith /*@C 24362f18eb33SBarry Smith 24372f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 24382f18eb33SBarry Smith 24392f18eb33SBarry Smith Not Collective 24402f18eb33SBarry Smith 24412f18eb33SBarry Smith Input Parameter: 24422f18eb33SBarry Smith + a - the PetscInt value 24432f18eb33SBarry Smith - b - the second value 24442f18eb33SBarry Smith 24452f18eb33SBarry Smith Output Parameter:ma 2446390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 24472f18eb33SBarry Smith 2448bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 24492f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 24502f18eb33SBarry Smith 2451f5f57ec0SBarry Smith Not available from Fortran 2452f5f57ec0SBarry Smith 2453220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 24542f18eb33SBarry Smith 24552f18eb33SBarry Smith Level: advanced 24562f18eb33SBarry Smith 2457220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 24582f18eb33SBarry Smith @*/ 24592f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 24602f18eb33SBarry Smith { 2461bafee8b4SSatish Balay PetscInt64 r; 24622f18eb33SBarry Smith 24632f18eb33SBarry Smith PetscFunctionBegin; 2464bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 24652f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 24662f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 24672f18eb33SBarry Smith #endif 2468f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2469f91af8c7SBarry Smith PetscFunctionReturn(0); 2470f91af8c7SBarry Smith } 2471f91af8c7SBarry Smith 2472f91af8c7SBarry Smith /*@C 2473f91af8c7SBarry Smith 2474fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2475f91af8c7SBarry Smith 2476f91af8c7SBarry Smith Not Collective 2477f91af8c7SBarry Smith 2478f91af8c7SBarry Smith Input Parameter: 2479f91af8c7SBarry Smith + a - the PetscInt value 2480f91af8c7SBarry Smith - b - the second value 2481f91af8c7SBarry Smith 2482f91af8c7SBarry Smith Output Parameter:ma 2483390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2484f91af8c7SBarry Smith 2485bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2486f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2487f91af8c7SBarry Smith 2488f5f57ec0SBarry Smith Not available from Fortran 2489f5f57ec0SBarry Smith 2490f91af8c7SBarry Smith Level: advanced 2491f91af8c7SBarry Smith 2492390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2493f91af8c7SBarry Smith @*/ 2494f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2495f91af8c7SBarry Smith { 2496bafee8b4SSatish Balay PetscInt64 r; 2497f91af8c7SBarry Smith 2498f91af8c7SBarry Smith PetscFunctionBegin; 2499bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2500f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2501f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2502f91af8c7SBarry Smith #endif 2503f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 25042f18eb33SBarry Smith PetscFunctionReturn(0); 25052f18eb33SBarry Smith } 2506c5df96a5SBarry Smith 2507d382aafbSBarry Smith /* 25082981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2509d382aafbSBarry Smith */ 2510d382aafbSBarry Smith #if defined(hz) 2511d382aafbSBarry Smith #undef hz 2512d382aafbSBarry Smith #endif 2513d382aafbSBarry Smith 2514d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2515d382aafbSBarry Smith 2516d382aafbSBarry Smith 2517d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2518d382aafbSBarry Smith #include <limits.h> 2519d382aafbSBarry Smith #endif 2520d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2521d382aafbSBarry Smith #include <sys/param.h> 2522d382aafbSBarry Smith #endif 2523d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2524d382aafbSBarry Smith #include <sys/types.h> 2525d382aafbSBarry Smith #endif 2526d382aafbSBarry Smith #if defined(MAXPATHLEN) 2527d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2528d382aafbSBarry Smith #elif defined(MAX_PATH) 2529d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2530d382aafbSBarry Smith #elif defined(_MAX_PATH) 2531d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2532d382aafbSBarry Smith #else 2533d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2534d382aafbSBarry Smith #endif 2535d382aafbSBarry Smith 2536d382aafbSBarry Smith /*MC 2537d382aafbSBarry Smith 253866d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 253966d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 254066d79e26SBarry Smith 254166d79e26SBarry Smith 254266d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 254366d79e26SBarry Smith 254466d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 254566d79e26SBarry Smith 254666d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 254766d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 254866d79e26SBarry Smith 254966d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 255066d79e26SBarry Smith 255166d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 255266d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 255366d79e26SBarry Smith version number (x.y.z). 255466d79e26SBarry Smith 255566d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 255666d79e26SBarry Smith 255766d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 255866d79e26SBarry Smith 255966d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 256066d79e26SBarry Smith 256166d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 256266d79e26SBarry Smith 256366d79e26SBarry Smith Level: intermediate 256466d79e26SBarry Smith 256566d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 256666d79e26SBarry Smith 256766d79e26SBarry Smith M*/ 256866d79e26SBarry Smith 256966d79e26SBarry Smith /*MC 257066d79e26SBarry Smith 25711b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 25721b266c99SBarry Smith of every function and module definition you need something like 2573d382aafbSBarry Smith 2574d382aafbSBarry Smith $ 2575af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 25760f665fc7SPatrick Sanan $ use petscXXX 25771b266c99SBarry Smith 2578692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 25791b266c99SBarry Smith 2580d382aafbSBarry Smith $ XXX variablename 25811b266c99SBarry Smith $ type(tXXX) variablename 25821b266c99SBarry Smith 2583692afcd8SPatrick Sanan For example, 25841b266c99SBarry Smith 2585bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 25861b266c99SBarry Smith $ use petscvec 2587d382aafbSBarry Smith $ 2588692afcd8SPatrick Sanan $ Vec b 2589692afcd8SPatrick Sanan $ type(tVec) x 2590d382aafbSBarry Smith 2591d382aafbSBarry Smith Level: beginner 2592d382aafbSBarry Smith 2593d382aafbSBarry Smith M*/ 2594d382aafbSBarry Smith 2595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 260127710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 26025f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2603d382aafbSBarry Smith 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 260522ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 260760e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2608d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 26126c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 261317d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 261417d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 261717df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 261939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2621745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 262239f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 26266c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 26276c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2628e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2629d382aafbSBarry Smith 2630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2632d382aafbSBarry Smith 263376bdecfbSBarry Smith /*J 2634d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2635d382aafbSBarry Smith 2636d382aafbSBarry Smith Level: beginner 2637d382aafbSBarry Smith 2638e28ce29aSPatrick Sanan Notes: 2639e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 264025ccb61fSToby Isaac with the option --download-sprng or --download-random123 2641d382aafbSBarry Smith 26428f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 264376bdecfbSBarry Smith J*/ 264419fd82e9SBarry Smith typedef const char* PetscRandomType; 2645d382aafbSBarry Smith #define PETSCRAND "rand" 2646d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2647d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2648c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 264925ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2650d382aafbSBarry Smith 2651d382aafbSBarry Smith /* Logging support */ 2652014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2653d382aafbSBarry Smith 2654607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2655d382aafbSBarry Smith 2656d382aafbSBarry Smith /*S 2657d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2658d382aafbSBarry Smith 2659d382aafbSBarry Smith Level: intermediate 2660d382aafbSBarry Smith 2661d382aafbSBarry Smith Concepts: random numbers 2662d382aafbSBarry Smith 2663d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2664d382aafbSBarry Smith S*/ 2665d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2666d382aafbSBarry Smith 2667d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2668140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2669d382aafbSBarry Smith 2670bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 267119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2672014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 267319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2674685405a1SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);} 2675014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2676d382aafbSBarry Smith 2677014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2678014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2679014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2686d382aafbSBarry Smith 2687014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2688014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2693014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 269497540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 269597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2696d382aafbSBarry Smith 2697014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2698014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2699014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2700014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 2701014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2702014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2703014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2704014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2705014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2706014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2707014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2708c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2709e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2710c891a504SStefano Zampini #endif 2711d382aafbSBarry Smith 2712d382aafbSBarry Smith /* 2713d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2714d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2715d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2716d382aafbSBarry Smith PetscBinarySeek(). 2717d382aafbSBarry Smith */ 2718d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2719d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2720d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2721d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2722d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2723d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2724d382aafbSBarry Smith 2725d382aafbSBarry Smith /*E 2726d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2727d382aafbSBarry Smith 2728d382aafbSBarry Smith Level: advanced 2729d382aafbSBarry Smith 2730d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2731d382aafbSBarry Smith E*/ 2732d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2733014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2734014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2735014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2736d382aafbSBarry Smith 2737014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2738014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2739014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2740014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2741014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2742014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2743d382aafbSBarry Smith 2744014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2745014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2746014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2747014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2748014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2749cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2750cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2751d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2752d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2753d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2754d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 27556afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 27566afbe7ddSJed Brown MPI_Request**,MPI_Request**, 27576afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 27586afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 27596afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2760d382aafbSBarry Smith 27616145cd65SJed Brown /*E 27626145cd65SJed Brown PetscBuildTwoSidedType - algorithm for setting up two-sided communication 27636145cd65SJed Brown 27646145cd65SJed Brown $ PETSC_BUILDTWOSIDED_ALLREDUCE - classical algorithm using an MPI_Allreduce with 27656145cd65SJed Brown $ a buffer of length equal to the communicator size. Not memory-scalable due to 27666145cd65SJed Brown $ the large reduction size. Requires only MPI-1. 27676145cd65SJed Brown $ PETSC_BUILDTWOSIDED_IBARRIER - nonblocking algorithm based on MPI_Issend and MPI_Ibarrier. 27686145cd65SJed Brown $ Proved communication-optimal in Hoefler, Siebert, and Lumsdaine (2010). Requires MPI-3. 27691654bf6bSJed Brown $ PETSC_BUILDTWOSIDED_REDSCATTER - similar to above, but use more optimized function 27701654bf6bSJed Brown $ that only communicates the part of the reduction that is necessary. Requires MPI-2. 27716145cd65SJed Brown 27726145cd65SJed Brown Level: developer 27736145cd65SJed Brown 27746145cd65SJed Brown .seealso: PetscCommBuildTwoSided(), PetscCommBuildTwoSidedSetType(), PetscCommBuildTwoSidedGetType() 27756145cd65SJed Brown E*/ 27766145cd65SJed Brown typedef enum { 27776145cd65SJed Brown PETSC_BUILDTWOSIDED_NOTSET = -1, 27786145cd65SJed Brown PETSC_BUILDTWOSIDED_ALLREDUCE = 0, 27791654bf6bSJed Brown PETSC_BUILDTWOSIDED_IBARRIER = 1, 278012af867fSJed Brown PETSC_BUILDTWOSIDED_REDSCATTER = 2 27816145cd65SJed Brown /* Updates here must be accompanied by updates in finclude/petscsys.h and the string array in mpits.c */ 27826145cd65SJed Brown } PetscBuildTwoSidedType; 27836145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 27846145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 27856145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 27866145cd65SJed Brown 2787014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2788d382aafbSBarry Smith 2789d382aafbSBarry Smith /*E 2790d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2791d382aafbSBarry Smith 2792d382aafbSBarry Smith Level: beginner 2793d382aafbSBarry Smith 2794d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2795d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2796d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2797d382aafbSBarry Smith E*/ 27986fbadbe2SMatthew G Knepley typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode; 2799d382aafbSBarry Smith 2800d382aafbSBarry Smith /*MC 2801d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2802d382aafbSBarry Smith 2803d382aafbSBarry Smith Level: beginner 2804d382aafbSBarry Smith 2805d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2806eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2807eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2808d382aafbSBarry Smith 2809d382aafbSBarry Smith M*/ 2810d382aafbSBarry Smith 2811d382aafbSBarry Smith /*MC 2812d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2813d382aafbSBarry Smith value into that location 2814d382aafbSBarry Smith 2815d382aafbSBarry Smith Level: beginner 2816d382aafbSBarry Smith 2817d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2818eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2819eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2820d382aafbSBarry Smith 2821d382aafbSBarry Smith M*/ 2822d382aafbSBarry Smith 2823d382aafbSBarry Smith /*MC 2824d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2825d382aafbSBarry Smith 2826d382aafbSBarry Smith Level: beginner 2827d382aafbSBarry Smith 2828d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2829d382aafbSBarry Smith 2830d382aafbSBarry Smith M*/ 2831d382aafbSBarry Smith 2832ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2833ce94432eSBarry Smith 283445487dadSJed Brown typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 283545487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 283645487dadSJed Brown 2837d382aafbSBarry Smith /*S 2838306c2d5bSBarry Smith PetscSubcomm - A decomposition of an MPI communicator into subcommunicators 2839306c2d5bSBarry Smith 2840e28ce29aSPatrick Sanan Notes: 2841e28ce29aSPatrick Sanan After a call to PetscSubcommSetType(), PetscSubcommSetTypeGeneral(), or PetscSubcommSetFromOptions() one may call 2842306c2d5bSBarry Smith $ PetscSubcommChild() returns the associated subcommunicator on this process 28433bf92927SBarry Smith $ PetscSubcommContiguousParent() returns a parent communitor but with all child of the same subcommunicator having contiguous rank 2844306c2d5bSBarry Smith 2845306c2d5bSBarry Smith Sample Usage: 2846306c2d5bSBarry Smith PetscSubcommCreate() 2847306c2d5bSBarry Smith PetscSubcommSetNumber() 2848306c2d5bSBarry Smith PetscSubcommSetType(PETSC_SUBCOMM_INTERLACED); 2849306c2d5bSBarry Smith ccomm = PetscSubcommChild() 2850306c2d5bSBarry Smith PetscSubcommDestroy() 2851d382aafbSBarry Smith 2852d382aafbSBarry Smith Level: advanced 2853d382aafbSBarry Smith 2854d382aafbSBarry Smith Concepts: communicator, create 2855306c2d5bSBarry Smith 2856306c2d5bSBarry Smith Notes: 2857306c2d5bSBarry Smith $ PETSC_SUBCOMM_GENERAL - similar to MPI_Comm_split() each process sets the new communicator (color) they will belong to and the order within that communicator 28583bf92927SBarry Smith $ PETSC_SUBCOMM_CONTIGUOUS - each new communicator contains a set of process with contiguous ranks in the original MPI communicator 2859306c2d5bSBarry Smith $ PETSC_SUBCOMM_INTERLACED - each new communictor contains a set of processes equally far apart in rank from the others in that new communicator 2860306c2d5bSBarry Smith 2861e28ce29aSPatrick Sanan Example: Consider a communicator with six processes split into 3 subcommunicators. 2862306c2d5bSBarry Smith $ PETSC_SUBCOMM_CONTIGUOUS - the first communicator contains rank 0,1 the second rank 2,3 and the third rank 4,5 in the original ordering of the original communicator 2863306c2d5bSBarry Smith $ PETSC_SUBCOMM_INTERLACED - the first communicator contains rank 0,3, the second 1,4 and the third 2,5 2864306c2d5bSBarry Smith 2865e28ce29aSPatrick Sanan Developer Notes: 2866e28ce29aSPatrick Sanan This is used in objects such as PCREDUNDANT to manage the subcommunicators on which the redundant computations 2867306c2d5bSBarry Smith are performed. 2868306c2d5bSBarry Smith 2869306c2d5bSBarry Smith 2870306c2d5bSBarry Smith .seealso: PetscSubcommCreate(), PetscSubcommSetNumber(), PetscSubcommSetType(), PetscSubcommView(), PetscSubcommSetFromOptions() 2871306c2d5bSBarry Smith 2872d382aafbSBarry Smith S*/ 2873d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2874d382aafbSBarry Smith 2875d382aafbSBarry Smith struct _n_PetscSubcomm { 2876d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2877d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2878306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 287945487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 288045487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2881708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 288245487dadSJed Brown PetscSubcommType type; 2883e5acf8a4SHong Zhang char *subcommprefix; 2884d382aafbSBarry Smith }; 2885d382aafbSBarry Smith 2886c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2887306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 288836be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2889014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2890014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2891014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2892014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 289365d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2894053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2895f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2896e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2897d382aafbSBarry Smith 28980f453b92SJed Brown /*S 28999962606eSBarry Smith PetscHeap - A simple class for managing heaps 29009962606eSBarry Smith 29019962606eSBarry Smith Level: intermediate 29029962606eSBarry Smith 29039962606eSBarry Smith Concepts: random numbers 29049962606eSBarry Smith 29059962606eSBarry Smith .seealso: PetscHeapCreate(), PetscHeapAdd(), PetscHeapPop(), PetscHeapPeek(), PetscHeapStash(), PetscHeapUnstash(), PetscHeapView(), PetscHeapDestroy() 29069962606eSBarry Smith S*/ 29079962606eSBarry Smith typedef struct _PetscHeap *PetscHeap; 29089962606eSBarry Smith 29099962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 29109962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 29119962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 29129962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 29139962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 29149962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 29159962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 29169962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 29179962606eSBarry Smith 29185e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 291942218b76SBarry Smith typedef struct _n_PetscCommShared* PetscCommShared; 292042218b76SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommSharedGet(MPI_Comm,PetscCommShared*); 29214e73f77fSBarry Smith PETSC_EXTERN PetscErrorCode PetscCommSharedGlobalToLocal(PetscCommShared,PetscMPIInt,PetscMPIInt*); 2922ee655a11SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommSharedGetComm(PetscCommShared,MPI_Comm*); 29235e71baefSBarry Smith 29249962606eSBarry Smith /*S 29250f453b92SJed Brown PetscSegBuffer - a segmented extendable buffer 29260f453b92SJed Brown 29270f453b92SJed Brown Level: developer 29280f453b92SJed Brown 29290f453b92SJed Brown .seealso: PetscSegBufferCreate(), PetscSegBufferGet(), PetscSegBufferExtract(), PetscSegBufferDestroy() 29300f453b92SJed Brown S*/ 29310f453b92SJed Brown typedef struct _n_PetscSegBuffer *PetscSegBuffer; 293213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 29330f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 293413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2935137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2936137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2937137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 293813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 293913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 29400f453b92SJed Brown 29415e71baefSBarry Smith 2942471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2943471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2944471ecdacSJed Brown * possible. */ 294535005c2bSLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,(size_t)count,(void**)slot);} 2946d382aafbSBarry Smith 29479de0f6ecSBarry Smith typedef struct _n_PetscOptionsHelpPrinted *PetscOptionsHelpPrinted; 29489de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 29499de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 29509de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 29519de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 29529de0f6ecSBarry Smith 2953ace2fbaeSBarry Smith #include <stdarg.h> 2954ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2955ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2956ace2fbaeSBarry Smith 2957268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2958fbfcfee5SBarry Smith 29591f817a21SBarry Smith /*@C 29601f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 29611f817a21SBarry Smith 29621f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 29631f817a21SBarry Smith 29641f817a21SBarry Smith Input Parameters: 29651f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 29661f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 29671f817a21SBarry Smith 2968850545d0SSatish Balay Level: intermediate 2969850545d0SSatish Balay 2970f5f57ec0SBarry Smith Not available from Fortran 2971f5f57ec0SBarry Smith 29721f817a21SBarry Smith Options Database: 2973063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 29741f817a21SBarry Smith @*/ 2975dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2976dff31646SBarry Smith { 2977dff31646SBarry Smith size_t len; 2978dff31646SBarry Smith char *vstring; 2979dff31646SBarry Smith PetscErrorCode ierr; 2980dff31646SBarry Smith 29811f817a21SBarry Smith PetscFunctionBegin; 29828d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2983dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 298435005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2985dff31646SBarry Smith ierr = PetscMemcpy(vstring,cit,len);CHKERRQ(ierr); 2986dff31646SBarry Smith if (set) *set = PETSC_TRUE; 29871f817a21SBarry Smith PetscFunctionReturn(0); 2988dff31646SBarry Smith } 2989dff31646SBarry Smith 2990b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2991fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2992fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2993f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2994fe278a28SBarry Smith 2995f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2996f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2997b967cddfSBarry Smith 29989f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 29999f4d3c52SBarry Smith 300004102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 3001763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 3002dff31646SBarry Smith 300368e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 30045dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 3005d382aafbSBarry Smith 3006b2566f29SBarry Smith 3007b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 3008b2566f29SBarry Smith /* 3009b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 3010b2566f29SBarry Smith */ 30118f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 301277a5e07dSBarry Smith 301377a5e07dSBarry Smith /*MC 301477a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 301577a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 301677a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 301777a5e07dSBarry Smith 301877a5e07dSBarry Smith Collective on MPI_Comm 301977a5e07dSBarry Smith 302077a5e07dSBarry Smith Synopsis: 302177a5e07dSBarry Smith #include <petscsys.h> 302277a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 302377a5e07dSBarry Smith 302477a5e07dSBarry Smith Input Parameters: 302577a5e07dSBarry Smith + indata - pointer to the input data to be reduced 302677a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 302777a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 302877a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 302977a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 303077a5e07dSBarry Smith 303177a5e07dSBarry Smith Output Parameter: 303277a5e07dSBarry Smith . outdata - the reduced values 303377a5e07dSBarry Smith 3034e28ce29aSPatrick Sanan Notes: 3035e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 303677a5e07dSBarry Smith 303777a5e07dSBarry Smith Level: developer 303877a5e07dSBarry Smith 303977a5e07dSBarry Smith .seealso: MPI_Allreduce() 304077a5e07dSBarry Smith M*/ 3041fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 3042b2566f29SBarry Smith #else 3043b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 3044b2566f29SBarry Smith #endif 3045b2566f29SBarry Smith 30466f7079ddSSatish Balay #if defined(PETSC_HAVE_MPI_WIN_CREATE_FEATURE) 30478198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 30488198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 30492f065d89SBarry Smith #endif 30508198064fSBarry Smith 305112801b39SBarry Smith /* 305212801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 305312801b39SBarry Smith */ 30548ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 30558ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 305612801b39SBarry Smith 3057d382aafbSBarry Smith #endif 3058